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The geometry of the automatic brain mask does not fit the image
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Description

The computed binary mask does not fit the geometry of the DWI Image, but the shape of the mask seems to be correct.

Event Timeline

[aed00e]: Merge branch 'bug-10275-BrainMaskGeometryBug'

Merged commits:

2011-11-30 16:19:23 Peter Neher [4adc54]
setting missing direction

the direction is set correctly now, but the filter shows some undeterministic behaviour (not really realted to this bugfix). if you run the brain extraction twice, it might happen that one time the result is ok and the next time the output image is empty. it also doesn't take the same amount of iterations each time to complete.
in general, this filter might need some improvement...