Preprocessing: include franks tensor reconstruction?

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I think we will

cool ;)

It can't be done before we are sure FWE can be open source

reopened to merge with master

[91d612]: Merge branch 'bug-11659-tensorWithCorrection'

Merged commits:

2012-04-25 14:17:02 Thomas Van Bruggen [99287e]
performed X and reversed it

2012-04-25 10:34:45 Thomas Van Bruggen [512348]
added voxdim instead of hard coding

2012-04-24 13:05:22 Thomas Van Bruggen [1fe9b4]
added missing header

2012-04-24 13:04:41 Thomas Van Bruggen [d72c86]
removed fwe from tensor reconstruction view

2012-04-24 13:03:02 Thomas Van Bruggen [53c2c7]
moved itkFreeWaterEliminationfilter to mbi

2012-04-23 16:18:57 Thomas Van Bruggen [5a9ded]
seperate copy of tensor image during each beltrami iteration

2012-04-23 14:29:44 Thomas Van Bruggen [fcb44d]
found failure in the mean of b. now hard coded

2012-04-23 12:47:16 Thomas Van Bruggen [3103c2]
fixed problem with nan

2012-04-20 16:46:01 Thomas Van Bruggen [9cacd0]
intermediate

2012-04-20 12:39:52 Thomas Van Bruggen [dc71ce]
added the free water elimination part of the fwe algorithm

2012-04-19 14:35:53 Thomas Van Bruggen [1f1b6a]
set up filter for free water elimination

2012-04-19 13:56:11 Thomas Van Bruggen [b6215c]
prepared input for free water elimination

2012-04-19 11:25:30 Thomas Van Bruggen [23e080]
created the setters necessary for the free water elimination algorithm

2012-04-19 11:14:42 Thomas Van Bruggen [3b5089]
renamed filter and added it to the tensor reconstruction view

2012-04-19 10:35:28 Thomas Van Bruggen [e085b4]
set up interface components for tensor reconstruction with correction for negative eigenvalues

2012-04-19 10:19:47 Thomas Van Bruggen [7bc23f]
Merge remote-tracking branch 'origin/bug-10827-fwe' into bug-11659-tensorWithCorrection

Conflicts:
Modules/Bundles/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkPreprocessingView.cpp
Modules/Bundles/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkPreprocessingView.h
Modules/Bundles/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkPreprocessingViewControls.ui
Modules/Bundles/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkTensorReconstructionView.cpp
Modules/DiffusionImaging/files.cmake

2012-04-19 09:57:17 Frank Binczyk [96687b]
also checking for zero valued voxels that caused bagi dataset to crash

2012-04-18 16:49:23 Frank Binczyk [203ba8]
set tensor image as output of the filter

2012-04-18 10:12:49 Frank Binczyk [b4458b]
code clean up in preprocesing filter

2012-03-15 17:24:47 Frank Binczyk [64a93a]
added min part

2012-03-08 15:29:38 Frank Binczyk [7ab77d]
export to dwi is done.filter is nearly finished

2012-03-08 10:24:57 Frank Binczyk [932c6d]
some minor changes

2012-03-07 13:25:40 Frank Binczyk [e28419]
first filter without data export

2012-02-24 17:57:45 Frank Binczyk [c88227]
added filtering of negative values

2012-02-24 16:58:25 Frank Binczyk [18ffa1]
fixed pseudoinverse calculation

2012-02-22 14:15:26 Frank Binczyk [beb3bf]
some changes

2012-02-20 15:47:58 Frank Binczyk [7d69c8]
intermediate commit

2012-02-08 13:47:20 Frank Binczyk [7f1ae4]
very first version of free water elimination filter

2012-02-03 10:57:15 Frank Binczyk [4a305b]
Merge remote-tracking branch 'origin/bug-10827-fwe' into bug-10827-fwe

2012-02-03 10:54:46 Thomas Van Bruggen [02f7ca]
added code for quick access to the gradient vectors

2012-02-02 15:21:29 Frank Binczyk [c4d79c]
Merge remote-tracking branch 'origin/bug-10827-fwe' into bug-10827-fwe

2012-02-02 14:49:04 Thomas Van Bruggen [4104a5]
enable fwe butten wenn a diffusion volume is selected

2012-02-02 14:47:48 Thomas Van Bruggen [24cb7a]
intermediate

2012-02-02 14:33:06 Thomas Van Bruggen [941757]
changed from threaded generate data to normal generate data

2012-02-02 14:19:06 Thomas Van Bruggen [0c5449]
created new filter for fwe

2012-01-25 11:02:32 Frank Binczyk [5671de]
added butten for free water elimination