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Maniphest T23431

[Photoacoustics] Include real partial volume effects into simulation
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Description

Currently partial volume effects are approximated with a gaussian blur of exactly one voxel. This needs to be changed to a more realistic partial volume scenario.

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Event Timeline

• groehl created this task.Sep 25 2017, 4:46 PM
• groehl moved this task from Backlog to wip on the Photoacoustics board.
• groehl added a comment.Sep 26 2017, 10:40 AM

Pushed new branch T23431-SimulatePartialVolumeEffects.

• groehl added a comment.Sep 27 2017, 7:36 PM

Pushed new branch T23431-PartialVolumeEffects.

• groehl added a comment.Oct 2 2017, 2:10 PM

The former implementation of vessels "dragged around" spheroids potentially considering each voxel multiple times. When just using partial volume spheres the same way, the results will not be correct if voxels are considered multiple times.

Will now go over to simulate a high resolution image and scale it down afterwards.

• groehl mentioned this in rMITK9c92b40fd0a8: Merge branch 'T23431-SimulatePartialVolumeEffects' of ssh://phabricator.mitk..Oct 6 2017, 10:14 AM
• groehl closed this task as Resolved.Oct 16 2017, 4:30 PM
• groehl mentioned this in rMITK23f9e9b60ff3: Merge branch 'T23431-SimulatePartialVolumeEffects' into T24512….Apr 4 2018, 11:52 AM
• groehl added a comment.Apr 4 2018, 4:04 PM

Pushed new branch T23431-MemoryConsumptionBug.

• groehl mentioned this in rMITK2c94ff7afd1b: Merge branch 'T23431-MemoryConsumptionBug' into T24512-SetupPASimulationPipeline.Apr 4 2018, 4:16 PM
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