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Saving Registered Data in new Coordinate frame
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Description

I am trying to save two segmentations after a registration to quantify the accuracy via Dice Coefficient. After Saving both binary masks and loading them into Matlab, it appear the images are back in their original coordinate system. Is there a way to save the segmentation in the same coordinate space in the software?

I have uploaded the segmentations here. Let me know if there are any other parts you need.

Best,

Tyler

Event Timeline

TE_Cork created this task.Wed, Jan 30, 6:23 AM
TE_Cork updated the task description. (Show Details)Wed, Jan 30, 6:26 AM

Additionally, I use landmarks and the RigidClosedForm3D algorithm to generate the registration.
Then I open MatchPoint Mapper, select the generated registration and the moving data followed by clicking Refine Geometry.
From there I make my segmentations on the moving and fixed image.