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Segmentation of 3D+t images not working
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Description

Segmentation of 3D+t images is currently not working because

  • there simply is no way to change the displayed time step (slider or similar)

Most segmentation tools -- at least the manual ones -- have been working on 3D+t images before so the slider should nearly be the complete solution to this bug.

Event Timeline

Checked with test-image US4DCyl.pic and the new bundle ImageNavigator, which provides a time slider. Works now for manual segmentation.

Does not work for organ segmentation (shape models). Can be reproduced by:

  • Load DataSet_Lung_4D
  • Choose tool "Lung left"
  • Start segmentation

Console output:
Segmentation done! Generating Output
Update selection from DataManager
selection changed
Reference 0000000000 Working 00000000000
Updating alignment warning
Nothing selected, re-show all segmentations

It is still possible to press continue after crash.
-> Works for me.

(In reply to comment #1)

Checked with test-image US4DCyl.pic and the new bundle ImageNavigator, which
provides a time slider. Works now for manual segmentation.

this sounds great, thanks for your work

Set this bug to resolved->worksforme, since the according problem with the shapemodels is worked on in T2987.

Merging "applicazion modules" component with "ExtApp plugins"

kislinsk changed the task status from Invalid to Spite.Jun 27 2018, 1:33 PM
kislinsk added a project: Bulk Edit.
kislinsk changed the task status from Spite to Invalid.Jun 27 2018, 1:37 PM
kislinsk removed a project: Bulk Edit.