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steint triaged T26073: [Chart] Implement stacked bar charts as Normal priority.
Tue, Feb 19, 9:27 PM · Restricted Project, MITK
steint added a comment to T26070: Stacked Data ignores set chart type.

That was a very quick finding. Yes, the current implementation only supports stacked area charts. That means, for now the 'stacked data' option should only be selectable if charty type equals area chart.

Tue, Feb 19, 9:25 PM · Restricted Project, MITK
hentsch closed T26067: Add possibility to add x-data as Resolved by committing rMITKa043041ddaed: Resolved T26067.
Tue, Feb 19, 5:16 PM · MITK
hentsch closed T26067: Add possibility to add x-data, a subtask of T25683: Chart Example Plugin, as Resolved.
Tue, Feb 19, 5:16 PM · MITK
hentsch added a comment to T26067: Add possibility to add x-data.

Pushed new branch T26067-addXData.

Tue, Feb 19, 5:14 PM · MITK
neher added a comment to T26058: [MITK Diffusion] Gibbs ringing is moving image?.

Pushed new branch T26058-RingingShift.

Tue, Feb 19, 4:12 PM · MITK
kraeuter edited parent tasks for T26072: Color doesn´t work on anything but Line, added: T23104: Deprecate QmitkPlotWidget; removed: T26071: Title option into global options.
Tue, Feb 19, 4:09 PM · Restricted Project, MITK
kraeuter added a subtask for T23104: Deprecate QmitkPlotWidget: T26072: Color doesn´t work on anything but Line.
Tue, Feb 19, 4:09 PM · Restricted Project, MITK
kraeuter removed a subtask for T26071: Title option into global options: T26072: Color doesn´t work on anything but Line.
Tue, Feb 19, 4:09 PM · Restricted Project, MITK
kraeuter edited parent tasks for T26071: Title option into global options, added: T23104: Deprecate QmitkPlotWidget; removed: T26070: Stacked Data ignores set chart type.
Tue, Feb 19, 4:09 PM · Restricted Project, MITK
kraeuter added a subtask for T23104: Deprecate QmitkPlotWidget: T26071: Title option into global options.
Tue, Feb 19, 4:09 PM · Restricted Project, MITK
kraeuter removed a subtask for T26070: Stacked Data ignores set chart type: T26071: Title option into global options.
Tue, Feb 19, 4:09 PM · Restricted Project, MITK
kraeuter edited parent tasks for T26070: Stacked Data ignores set chart type, added: T23104: Deprecate QmitkPlotWidget; removed: T26069: Logarithmic axis scaling display problems.
Tue, Feb 19, 4:08 PM · Restricted Project, MITK
kraeuter added a subtask for T23104: Deprecate QmitkPlotWidget: T26070: Stacked Data ignores set chart type.
Tue, Feb 19, 4:08 PM · Restricted Project, MITK
kraeuter removed a subtask for T26069: Logarithmic axis scaling display problems: T26070: Stacked Data ignores set chart type.
Tue, Feb 19, 4:08 PM · Restricted Project, MITK
kraeuter triaged T26072: Color doesn´t work on anything but Line as Normal priority.
Tue, Feb 19, 4:06 PM · Restricted Project, MITK
kraeuter triaged T26071: Title option into global options as Normal priority.
Tue, Feb 19, 4:04 PM · Restricted Project, MITK
kraeuter triaged T26070: Stacked Data ignores set chart type as Normal priority.
Tue, Feb 19, 4:00 PM · Restricted Project, MITK
kraeuter triaged T26069: Logarithmic axis scaling display problems as Normal priority.
Tue, Feb 19, 3:57 PM · Restricted Project, MITK
hentsch merged T25987: Use AddData2D into T26067: Add possibility to add x-data.
Tue, Feb 19, 1:43 PM · MITK
hentsch merged task T25987: Use AddData2D into T26067: Add possibility to add x-data.
Tue, Feb 19, 1:43 PM · MITK
hentsch claimed T26067: Add possibility to add x-data.
Tue, Feb 19, 1:42 PM · MITK
hentsch triaged T26067: Add possibility to add x-data as Normal priority.
Tue, Feb 19, 1:41 PM · MITK
floca added a project to T26057: Remove mitkCommandLineParser input and output types: Request for Discussion.
Tue, Feb 19, 11:52 AM · Request for Discussion, MITK
hentsch merged task T23413: integrate heatmap in MitkChart? into Restricted Maniphest Task.
Tue, Feb 19, 9:36 AM · MITK
seitela added a comment to T23624: Connection to Epiphan frame grabber via OpenCV is buggy.
Tue, Feb 19, 9:11 AM · IGT, Restricted Project, MITK

Mon, Feb 18

fedorov added a comment to T26033: Update ModelFit manual.

Also note that the link to the manual from the ModelFit page (which I am assuming is http://mitk.org/wiki/MITK-ModelFit) is currently broken: http://mitk.org/index.php?title=MITK_ModelFit_Manual_2018-07-17.pdf&action=edit&redlink=1

Mon, Feb 18, 10:32 PM · Restricted Project, MITK
neher triaged T26062: [MITK Diffusion] Implement parallel imaging as Wishlist priority.
Mon, Feb 18, 7:31 PM · MITK
neher triaged T26061: [MITK Diffusion] Fiberfox 3D sequences as Wishlist priority.
Mon, Feb 18, 7:30 PM · MITK
sattler added a comment to T26060: Command-line interface for PhotoacousticsAlgorithms.

Pushed new branch T26060-MITK-PhotoacousticsBFTool.

Mon, Feb 18, 7:18 PM · MITK, Photoacoustics
sattler triaged T26060: Command-line interface for PhotoacousticsAlgorithms as Normal priority.
Mon, Feb 18, 7:17 PM · MITK, Photoacoustics
kalali added a comment to T24766: Last time step of 3D+t data with arbitrary time geometry not selectable by image navigator spinbox.

Any more ideas on this? I stumbled across this while investigating another DICOM problem.

Mon, Feb 18, 3:56 PM · MITK
kalali added a comment to T25065: Incorrect loading of DICOM images generated by SIEMENS MR-PET.

I found some PET data in XNAT (FS-E Demodata)

Mon, Feb 18, 3:19 PM · Restricted Project, MITK
neher added a comment to T26057: Remove mitkCommandLineParser input and output types.

Pushed new branch T26057-CommandLineIOtypes.

Mon, Feb 18, 10:20 AM · Request for Discussion, MITK
neher triaged T26058: [MITK Diffusion] Gibbs ringing is moving image? as Normal priority.
Mon, Feb 18, 10:09 AM · MITK
neher triaged T26057: Remove mitkCommandLineParser input and output types as Normal priority.
Mon, Feb 18, 10:00 AM · Request for Discussion, MITK
neher triaged T26056: [MITK Diffusion] Integrated MIC Bet update in MITK Diffusion as Wishlist priority.
Mon, Feb 18, 9:54 AM · MITK
kraeuter added a comment to T26013: Define ground truth.

I`m trying to understand how everything is calculated and having created 3x3 pixel test images I can calculate the ground truth by hand.
So far no problems, but after calculating I like to check if my numbers and the ones in the GUI are at least somewhat similiar.

Mon, Feb 18, 9:18 AM · Restricted Project, MITK

Fri, Feb 15

floca triaged T26055: Add superbuild configuration option "with ModelFit" as Normal priority.
Fri, Feb 15, 11:42 PM · Restricted Project, MITK
franza added a comment to T23624: Connection to Epiphan frame grabber via OpenCV is buggy.

Cool! Thanks for taking care for this. I'm looking forward to use the Epiphan grabber directly again (current workaround: PLUS Server and OpenIGTLink). If you need any help please let me know. There also is a nice chat support on the Epiphan page.

Fri, Feb 15, 11:09 PM · IGT, Restricted Project, MITK
milano added a comment to T26002: Unhandled exception in mitkNDITrackingDevice::ThreadStartTracking.

Hi. I completely agree with your comment. I just implemented a handler to avoid a call to terminate() in my application, but the implementation is incomplete. The main problem, as you commented,, is how are we going to let know the main thread that an exception occurred in the tracking thread. There are several possibilities (it would be great to have Qt signals mechanism here), but I think that we have two main options:

Fri, Feb 15, 10:23 PM · Pull Request, MITK
aguilera added a comment to T23624: Connection to Epiphan frame grabber via OpenCV is buggy.

Pushed new branch T23624-ConnectionToEpiphanFrameGrabberViaOpenCVIsBuggy.

Fri, Feb 15, 9:09 PM · IGT, Restricted Project, MITK
seitela added a comment to T23624: Connection to Epiphan frame grabber via OpenCV is buggy.

Thanks for looking into this. Keep in mind that we should still keep the current implementation to grab images as it allows to grab far more than only from the Epiphan frame grabber. Once the feasibility of using the SDK is shown, we should think of integrating it as a separate video source that is dependent on the specific Epiphan SDK.

Fri, Feb 15, 4:57 PM · IGT, Restricted Project, MITK
mindrocf updated subscribers of T23624: Connection to Epiphan frame grabber via OpenCV is buggy.

We digged into the Epiphan SDK and found the V2U_GrabFrame2 structure which is returned by the GrabFrame method. We will try to convert this structure to an mitk Image using also the ITKConvertIplImageBuffer logic. Afterwards, we will try to replace the OpenCV VideoCapture method by using the Epiphan SDK in MITK directly. @aguilera

Fri, Feb 15, 4:13 PM · IGT, Restricted Project, MITK
steint added a commit to T25859: [chart] implement stacked chart: rMITKba9fdb45768a: Add stacked area chart. Fixes T25859..
Fri, Feb 15, 3:23 PM · MITK
steint closed T25859: [chart] implement stacked chart as Resolved by committing rMITKfcc0d997a8c3: Merge branch 'T25859-stacked-area-chart' Fixes T25859..
Fri, Feb 15, 3:23 PM · MITK
steint added a comment to T25859: [chart] implement stacked chart.

Pushed new branch T25859-stacked-area-chart.

Fri, Feb 15, 2:48 PM · MITK
seitela added a comment to T26002: Unhandled exception in mitkNDITrackingDevice::ThreadStartTracking.

Thanks for this contributions! It seems there are some open issues regarding exception handling in the NDITrackingDevice.

Fri, Feb 15, 2:00 PM · Pull Request, MITK
floca added a comment to T19999: DICOM CGet and CMove don't work correctly.

OK, then there is still an error with test 3.

Fri, Feb 15, 1:18 PM · Restricted Project, Restricted Project, MITK
steint closed T25870: [chart] Implement the chart types spline, area, area_spline and scatter as Resolved by committing rMITK6b6651e57a14: Support chart types spline, area, area-spline and scatter Fixes T25870..
Fri, Feb 15, 1:00 PM · Restricted Project, MITK
steint closed T25870: [chart] Implement the chart types spline, area, area_spline and scatter , a subtask of T23104: Deprecate QmitkPlotWidget, as Resolved.
Fri, Feb 15, 1:00 PM · Restricted Project, MITK
steint added a comment to T25870: [chart] Implement the chart types spline, area, area_spline and scatter .

Pushed new branch T25870-chart-types.

Fri, Feb 15, 12:58 PM · Restricted Project, MITK
seitela closed T26001: The return value in mitkSerialCommunication::Send is inconsistent under Microsoft Windows Platforms as Resolved.

Merged pull request as discussed on https://sourceforge.net/p/mitk/mailman/message/36525424/

Fri, Feb 15, 12:23 PM · Pull Request, MITK
seitela added a comment to T26001: The return value in mitkSerialCommunication::Send is inconsistent under Microsoft Windows Platforms.

Pushed new branch T26001-Replaced_GetLastError_for_ERROR_VALUE_in_Windows.

Fri, Feb 15, 12:20 PM · Pull Request, MITK
gaoh added a comment to T19999: DICOM CGet and CMove don't work correctly.

Point 1 and 2 are working.
With point 3: not all the series are downloaded: I retrieved all 5 series of a patient, but only got 2 series. Separately retrieving of each series was fine.

Fri, Feb 15, 12:18 PM · Restricted Project, Restricted Project, MITK
steint added a subtask for T23104: Deprecate QmitkPlotWidget: Restricted Maniphest Task.
Fri, Feb 15, 10:33 AM · Restricted Project, MITK
steint closed T25972: Add title to plugin as Resolved by committing rMITKd083ff01727d: Add chart title to example plugin. Fixes T25972..
Fri, Feb 15, 10:23 AM · MITK
steint closed T25972: Add title to plugin, a subtask of T25683: Chart Example Plugin, as Resolved.
Fri, Feb 15, 10:23 AM · MITK
steint added a comment to T25972: Add title to plugin.

Pushed new branch T25972-chart-title.

Fri, Feb 15, 10:18 AM · MITK
eisenman added a project to T24754: Volume Visualization crashes with some CT images: Restricted Project.
Fri, Feb 15, 10:02 AM · Restricted Project, MITK
neher closed T26043: [MITK Diffusion] Fiberfox test as Resolved.
Fri, Feb 15, 9:39 AM · MITK
neher added a comment to T26043: [MITK Diffusion] Fiberfox test.

remove rand from DIffusion module. Use itk mersenne twister for inter platform consistency

Fri, Feb 15, 8:24 AM · MITK

Thu, Feb 14

neher closed T26046: Screenshot maker should enbale image series of all components as Resolved.
Thu, Feb 14, 5:18 PM · MITK
neher added a comment to T26046: Screenshot maker should enbale image series of all components.

Pushed new branch T26046-MultiCompScreenshot.

Thu, Feb 14, 4:12 PM · MITK
neher triaged T26046: Screenshot maker should enbale image series of all components as Wishlist priority.
Thu, Feb 14, 4:11 PM · MITK
neher added a comment to T26043: [MITK Diffusion] Fiberfox test.

Pushed new branch T26043-FiberfoxTest.

Thu, Feb 14, 2:07 PM · MITK
neher triaged T26043: [MITK Diffusion] Fiberfox test as Normal priority.
Thu, Feb 14, 2:06 PM · MITK
mittmann added a comment to T25522: Fiducial based CT registration.

Pushed new branch T25522-MasterIntegrationBranch-14-02-2019.

Thu, Feb 14, 1:29 PM · Restricted Project, MITK, IGT
neher closed T26042: [MITK Diffusion] Fiberfox fox seed should also fix in parameter loading as Resolved.
Thu, Feb 14, 11:50 AM · MITK
neher added a comment to T26042: [MITK Diffusion] Fiberfox fox seed should also fix in parameter loading.

Pushed new branch T26042-FiberfoxFixSeed.

Thu, Feb 14, 11:47 AM · MITK
neher triaged T26042: [MITK Diffusion] Fiberfox fox seed should also fix in parameter loading as Normal priority.
Thu, Feb 14, 11:45 AM · MITK

Wed, Feb 13

gaoh added a comment to T19999: DICOM CGet and CMove don't work correctly.

yes I will try, I already tried Q/R with the current installer and the wdb and it worked.

Wed, Feb 13, 5:52 PM · Restricted Project, Restricted Project, MITK
floca lowered the priority of T19999: DICOM CGet and CMove don't work correctly from High to Low.

@reicht: Thanks
@gaoh : Could you (not of high priority; so within the next month, or at a community day) check if the problem still exists with a actual installer. If you need an installer with DICOM editor, i can provide one.

Wed, Feb 13, 5:45 PM · Restricted Project, Restricted Project, MITK
reicht added a comment to T19999: DICOM CGet and CMove don't work correctly.

OsiriX / Horos instance is online:

Wed, Feb 13, 5:31 PM · Restricted Project, Restricted Project, MITK
hentsch triaged T26037: Make use of custom statistic values possible as Normal priority.
Wed, Feb 13, 3:59 PM · MITK
kalali added a project to T24810: Display interaction synchronization with world coordinates: Restricted Project.
Wed, Feb 13, 2:22 PM · Restricted Project, MITK
kalali added a project to T24672: Create decoration manager for render windows widgets: Restricted Project.
Wed, Feb 13, 2:22 PM · Restricted Project, MITK
kalali added a project to T24161: Common interface for Custom-/Std-Multi widget (editor): Restricted Project.
Wed, Feb 13, 2:22 PM · Restricted Project, MITK
kalali added a project to T24216: Synchronization of individual render windows: camera position: Restricted Project.
Wed, Feb 13, 2:22 PM · Restricted Project, MITK
kalali placed T25604: New concept for switching between different render windows up for grabs.
Wed, Feb 13, 2:20 PM · Restricted Project, MITK
kalali placed T25601: Modernize render window manager up for grabs.
Wed, Feb 13, 2:20 PM · Restricted Project, MITK
kalali placed T24810: Display interaction synchronization with world coordinates up for grabs.
Wed, Feb 13, 2:19 PM · Restricted Project, MITK
kalali placed T24672: Create decoration manager for render windows widgets up for grabs.
Wed, Feb 13, 2:19 PM · Restricted Project, MITK
kalali placed T24161: Common interface for Custom-/Std-Multi widget (editor) up for grabs.
Wed, Feb 13, 2:18 PM · Restricted Project, MITK
kalali placed T24216: Synchronization of individual render windows: camera position up for grabs.
Wed, Feb 13, 2:18 PM · Restricted Project, MITK
hentsch removed a parent task for T25833: Leak/Debugbreak when closing workbench related to MitkChart: Unknown Object (Maniphest Task).
Wed, Feb 13, 12:10 PM · Restricted Project, MITK
hentsch renamed T25833: Leak/Debugbreak when closing workbench related to MitkChart from Leak/Debugbreak when closing workbench after opening new image statistics plugin to Leak/Debugbreak when closing workbench related to MitkChart.
Wed, Feb 13, 12:10 PM · Restricted Project, MITK
hentsch lowered the priority of T25833: Leak/Debugbreak when closing workbench related to MitkChart from Normal to Low.

Is not fixed with Qt 5.12.
It does only appear in Debug mode
Also, it also appears without building the image statistics plugin (measurement toolbox). Hence, the problem is probably originated in MitkChart (which uses QWebEngineWidget):

Wed, Feb 13, 12:10 PM · Restricted Project, MITK
neher closed T26031: [MITK Diffusion] Not all spikes are generated as Resolved.
Wed, Feb 13, 11:27 AM · MITK
neher closed T26024: [MITK Diffusion] Head motion with volume fraction maps causes holes as Resolved.
Wed, Feb 13, 11:21 AM · MITK
neher added a comment to T26031: [MITK Diffusion] Not all spikes are generated.

Pushed new branch T26031-FiberfoxSpikes.

Wed, Feb 13, 11:20 AM · MITK
neher added a comment to T26031: [MITK Diffusion] Not all spikes are generated.

caused by openmp parallelization

Wed, Feb 13, 10:49 AM · MITK
floca moved T22780: Possibility to filter reader services when using IOutils from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Wed, Feb 13, 10:49 AM · Restricted Project, MITK
floca moved T25704: Difference between GUI and expected values MitkImageStatisticsCalculatorTests from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Wed, Feb 13, 10:46 AM · Restricted Project, MITK
hentsch closed T25856: [image statistics plugin] Histogram and Line profile are shown together in Caching case as Resolved by committing rMITKce2297c86dfb: resolved T25856.
Wed, Feb 13, 8:58 AM · Restricted Project, MITK
hentsch added a comment to T25856: [image statistics plugin] Histogram and Line profile are shown together in Caching case.

Pushed new branch T25856-histogramAndLineProfileShown.

Wed, Feb 13, 8:56 AM · Restricted Project, MITK
hentsch claimed T25856: [image statistics plugin] Histogram and Line profile are shown together in Caching case.
Wed, Feb 13, 8:38 AM · Restricted Project, MITK

Tue, Feb 12

floca created T26033: Update ModelFit manual.
Tue, Feb 12, 7:22 PM · Restricted Project, MITK
neher triaged T26031: [MITK Diffusion] Not all spikes are generated as High priority.
Tue, Feb 12, 5:47 PM · MITK
neher created T26031: [MITK Diffusion] Not all spikes are generated.
Tue, Feb 12, 5:46 PM · MITK