- now the beamforming is independent from the kind of PA image fed. simplified…

-Added a simple Abs BmodeFilter -Made a correction for CPU USImage Beamforming

fixed undefined behaviour artifacts in US images --Thomas

this now actually realizes if the geometry changes again -Thomas

Merge branch 'master' into T19932-labSetupIntegrationAugust2017

dealing with a random warning in berryCTKPluginActivator -Thomas

Merge branch 'T19931-labSetupIntegrationAugust2017' of https://phabricator.mitk.

removed some warnings-as-errors related to variable conversion -Thomas

set specific paths and parameters for the camiPAsetup build configuration…

not necessary anymore (removed cmake error) -thomas

this now actually scans multiple angles -Thomas

this fixes an issue where PA signal was mixed in US data

-fixed issue with US image not correctly calculated, only GPU, needs to be…

- fixed the fft crashing issue by resampling the image to a power of two before…

- the beamforming automatically crops images to 4096 samples, as higher samples…

- simplified lots of code - reimplemented the tukey window instead of the…

- fixed resampling error in BMode Filter - added a bandpass filter GUI element…

-fixed an error with chunk-wise beamforming -Rewrote the Cropping Filter, made…

- added choice of GPU/CPU computing - made GPU compte the image in chunks of 40…

- fixed speedOfSound paramter for PA, it's now updated if it changes…

- cleaned up opencl scripts - set up a filter for cropping - gpu-computing is…

-Now the raw US data is being saved, too!

Fixed a few errors, added a class to handle a second GPU calculation DMAS could…

The DAS Algorithms work on GPU. The DMAS Algorithms need to be rewritten, as it…

-Spherical DAS works on GPU

-Set up almost everything for GPU calculations. only thing left to do: write…

-greatly simplified code by merging the seperate beamformer classes -setup some…

-deleted unnecessary linear delay

T22228 - bug fixes and gui improvements

T22228 -fixed a small bug with the BP -found out the white stripes on bottom of…

T22228 -cleaned up some code, added some comments...

Signed-off-by: Franz Sattler <sattler@ad.dkfz-heidelberg.de>

T19932 -rewrote a part of the lasercontrol GUI, so that the…

T22228

T22228 -just fixed a small normalization error

T22228 -moved a bracket

T22228 -small bugfix -big bugfix (forgot a factor in plane wave reconstruction)

T22228 - both bmode image processing and beamforming work now in seperate…

T22228 -setup things to move the Beamforming into a seperate QThread

T22228 -Changed lots of stuff in the GUI

T22228 -Bandpass should be stable, all configurations that could crash it are…

T22228 -added ability to choose between von Hann, Hamming, and Box apodization

T22228 -fixed cropping issues by writing a new crop filter...

T22228 -progress bar fix for not stalling

T22228 -added a progress bar for beamforming

T22228 -added possibility to crop the useless upper voxels of the input images…

T22228 -Added BP Filter to DAS -made it possible to toggle BP on/off

T22228 -changed interpolator to linear

T22228 -The Bandpass spectrum now makes sense

T22228 -include fixed

T19932 -save USImages and settings used for Transmission/Receiving/Beamforming

T22228 -can configure BP for DMAS through GUI now -nicer code

T19932 just changed spacing of raw images to [us]

T22228 -small fixes -wrote code to use a pool of 12 threads, but it did not…

T22228 -fixed spacing issues -photoacoustic mode uses now only the upper half…

T22228 -multithreaded both DAS and DMAS beamforming -added option to use the…

T22228 -for convenience every filter creates now a new node to display the data…

T22228 -added element angle and new apodisation also using a Von-Han window and…

T19932 -stuff Thomas didn't commit -fixed raw spacing ([s])

T22228 -fix

T22228 -fixed some redundant calculations, halfed calculation time, DMAS needs…

T22228 -BP works, needs perhaps some more adjusting

T22228 -the bandpass using the tukey window is now implemented, though it needs…

T22228 - added a tukey window function, to be used in bandpassing

T22228 - For the DMAS, the Linear Delay Calculation seems to be so inaccurate…

-little fix, needs more fix

T22228 -As of now, the DMAS is written but the results make absolutely no sense.

T22228 -the beamforming works now. I added three methods of delay calculation…

T22228 first test

T22228 Set up GUI and classes etc so the only thing left to be done is writing…

ScaleLegendOverlay is now ScaleLegendAnnotation making those changes necessary…

Merge remote-tracking branch 'origin/T2662-darkStyle2017' into T19932-labSetup

Merge branch 'T19932-hardwareControlUnited' into T19932-labSetup

T22228 -Added some settings for filter

T19932 -added a way to switch energy compensation on and off

T19932 -opening and closing the PausViewer Plugin while running the US Module…

next try for a new darktheme this is adapted from a qt theme by Colin Duquesnoy…

T19932 -Removed the seperate windows for US and PA images -PAUSViewer Plugin…

removed disfunct pausmultiwidgeteditor

created plugins for simultaneous viewing of PAT and US ... the pausmultiwidget…

fixed a typo

these are uncomitted changes by franz ... tztztz

-made some code look nicer

T19932 -just small fixes

T19932 -made the windows look much nicer -added a nice levelwindow! but it's…

T19932 - made beamformed and raw seperately saveable (finished) - removed…

T19932 -added a scale (needs some serious tuning) -saving the raw images works…

new default values for qpat purposes

T19932 -we now have seperate windows for PA and US images -did some setup for…

T19932 -GUI updates -implemented overlays -setup new RenderWindows

T19932

T19932 -fixed bugs -found out how to add overlays and set up some stuff -found…

T19932 -compensation works now as it should, and places the fluence…

T19932 -fixed error when resizing fluence images

T19932 - correction for energy values is now being done

T19932 -fixed the saving of the energy values and timestamps of ophir

T19932 - Fluence compensation works now, only thing left to do is to load all…

T19932 -resampling can be set now in the gui -set up lots of things so…