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Jul 27 2020

neher committed rMITKDIFF41bb26f8f05a: Auto-adjusting parameters (authored by neher).
Auto-adjusting parameters
Jul 27 2020, 10:29 AM
neher added a comment to T27603: Fit fiber compression to image spacing.

Pushed new branch T27603-FibCompression.

Jul 27 2020, 10:28 AM · MITK Diffusion

Jul 24 2020

neher triaged T27603: Fit fiber compression to image spacing as High priority.
Jul 24 2020, 4:22 PM · MITK Diffusion
neher committed rMITKDIFF4b9493566e83: Merge branch 'T27601-FiberSliceThickness' (authored by neher).
Merge branch 'T27601-FiberSliceThickness'
Jul 24 2020, 2:52 PM
neher committed rMITKDIFFfc8a6a116d4a: adjusting thickness (authored by neher).
adjusting thickness
Jul 24 2020, 2:51 PM
neher added a comment to T27601: Fiber2DSliceThickness in fiber processing.

Pushed new branch T27601-FiberSliceThickness.

Jul 24 2020, 2:51 PM · MITK Diffusion
neher triaged T27601: Fiber2DSliceThickness in fiber processing as Normal priority.
Jul 24 2020, 2:32 PM · MITK Diffusion
neher placed T27250: Color scale overlay does not work up for grabs.
Jul 24 2020, 12:14 PM · Auto-closed, MITK
neher closed T27597: streamline tracking view slot connections as Resolved.
Jul 24 2020, 12:06 PM · MITK Diffusion
neher committed rMITKDIFF2efe4e6ff15a: Merge branch 'T27597-TrackingSignalSlot' (authored by neher).
Merge branch 'T27597-TrackingSignalSlot'
Jul 24 2020, 12:02 PM
neher committed rMITKDIFFa14904410dfc: Fixed connections (authored by neher).
Fixed connections
Jul 24 2020, 12:02 PM
neher added a comment to T27597: streamline tracking view slot connections.

Pushed new branch T27597-TrackingSignalSlot.

Jul 24 2020, 12:02 PM · MITK Diffusion
neher triaged T27597: streamline tracking view slot connections as Normal priority.
Jul 24 2020, 11:36 AM · MITK Diffusion
neher placed T27324: Investigate MITK <--> python image transfer up for grabs.
Jul 24 2020, 11:35 AM · Auto-closed, MITK

Jul 23 2020

neher closed T27593: Make gradient container const as Resolved.
Jul 23 2020, 3:54 PM · MITK Diffusion
neher committed rMITKDIFF28aae932ffa7: Merge branch 'T27593-ConstGradientContainer' (authored by neher).
Merge branch 'T27593-ConstGradientContainer'
Jul 23 2020, 3:34 PM
neher committed rMITKDIFF85ad246cb262: Constified (authored by neher).
Constified
Jul 23 2020, 3:34 PM
neher added a comment to T27593: Make gradient container const.

Pushed new branch T27593-ConstGradientContainer.

Jul 23 2020, 3:34 PM · MITK Diffusion
neher closed T27590: Streamline tractography min voxel size is not set in GUI as Resolved.
Jul 23 2020, 3:33 PM · MITK Diffusion
neher committed rMITKDIFF366a1bd5f3cf: Merge branch 'T27590-StreamlineMinVoxel' (authored by neher).
Merge branch 'T27590-StreamlineMinVoxel'
Jul 23 2020, 3:32 PM
neher committed rMITKDIFF74a10e1d4f92: Setting in each init (authored by neher).
Setting in each init
Jul 23 2020, 2:03 PM
neher added a comment to T27590: Streamline tractography min voxel size is not set in GUI.

Pushed new branch T27590-StreamlineMinVoxel.

Jul 23 2020, 2:03 PM · MITK Diffusion
neher triaged T27593: Make gradient container const as Normal priority.
Jul 23 2020, 1:50 PM · MITK Diffusion
neher triaged T27590: Streamline tractography min voxel size is not set in GUI as Normal priority.
Jul 23 2020, 9:41 AM · MITK Diffusion

Jul 22 2020

neher closed T27584: Ubuntu 20.04 as Resolved.
Jul 22 2020, 8:59 AM · MITK Diffusion
neher committed rMITKDIFFef5030ce5701: Merge branch 'T27584-Ubuntu2004' (authored by neher).
Merge branch 'T27584-Ubuntu2004'
Jul 22 2020, 8:57 AM
neher committed rMITKDIFF1eb30bd764dc: Fixed gcc 9 issues (authored by neher).
Fixed gcc 9 issues
Jul 22 2020, 8:57 AM
neher added a comment to T27584: Ubuntu 20.04.

Pushed new branch T27584-Ubuntu2004.

Jul 22 2020, 8:57 AM · MITK Diffusion
neher triaged T27584: Ubuntu 20.04 as Normal priority.
Jul 22 2020, 8:56 AM · MITK Diffusion

Jul 17 2020

neher closed T27567: ODF glyp visualization is broken as Resolved.
Jul 17 2020, 2:02 PM · MITK Diffusion
neher committed rMITKDIFF6452bb11656a: Merge branch 'T27567-GlyphIssue' (authored by neher).
Merge branch 'T27567-GlyphIssue'
Jul 17 2020, 11:01 AM
neher committed rMITKDIFF5d95610af7d7: widget name change (authored by neher).
widget name change
Jul 17 2020, 11:00 AM
neher added a comment to T27567: ODF glyp visualization is broken.

Pushed new branch T27567-GlyphIssue.

Jul 17 2020, 11:00 AM · MITK Diffusion
neher triaged T27567: ODF glyp visualization is broken as Normal priority.
Jul 17 2020, 10:56 AM · MITK Diffusion

Jul 8 2020

neher triaged T27540: Bruker small animal diffusion MRI DICOM not loadable correctly in MITK (Diffusion) as Normal priority.
Jul 8 2020, 12:04 PM · Auto-closed, MITK

Jun 30 2020

neher closed T27512: Fix registration file renaming as Resolved.
Jun 30 2020, 11:49 AM · MITK Diffusion
neher committed rMITKDIFF108f4325ec45: Merge branch 'T27512-FixRenamingIssue' (authored by neher).
Merge branch 'T27512-FixRenamingIssue'
Jun 30 2020, 11:44 AM
neher committed rMITKDIFF402417bfc4da: Fix naming issue in cmdapp (authored by neher).
Fix naming issue in cmdapp
Jun 30 2020, 11:43 AM
neher committed rMITKDIFF5b3c0b588122: Merge branch 'T27512-FixRenamingIssue' (authored by neher).
Merge branch 'T27512-FixRenamingIssue'
Jun 30 2020, 11:38 AM
neher committed rMITKDIFFfdab76cac1da: Fix naming issue in cmdapp (authored by neher).
Fix naming issue in cmdapp
Jun 30 2020, 11:38 AM
neher committed rMITKDIFF1625582d6eab: Merge branch 'T27512-FixRenamingIssue' (authored by neher).
Merge branch 'T27512-FixRenamingIssue'
Jun 30 2020, 10:58 AM
neher committed rMITKDIFFebc7079eaa01: Renamed include (authored by neher).
Renamed include
Jun 30 2020, 10:57 AM
neher added a comment to T27512: Fix registration file renaming.

Pushed new branch T27512-FixRenamingIssue.

Jun 30 2020, 10:57 AM · MITK Diffusion
neher triaged T27512: Fix registration file renaming as Normal priority.
Jun 30 2020, 10:56 AM · MITK Diffusion

Jun 22 2020

neher committed rMITK119dbc557eb9: Unsupported/untested qt version is now a warning, not a cmake error (authored by neher).
Unsupported/untested qt version is now a warning, not a cmake error
Jun 22 2020, 9:18 AM

Jun 19 2020

neher triaged T27487: Multi-slice screenshots as Wishlist priority.
Jun 19 2020, 8:46 AM · Auto-closed, MITK

Jun 18 2020

neher added a revision to T26721: Prepare Qt 5.13 compatibility: Unknown Object (Differential Revision).
Jun 18 2020, 9:38 AM · MITK
neher added a comment to T26721: Prepare Qt 5.13 compatibility.

Pushed new branch T26721-UpgradeQtVersion.

Jun 18 2020, 9:35 AM · MITK

Jun 9 2020

neher committed rMITKDIFF7e4105a7626b: Merge branch 'T27472-FiberStatistics' (authored by neher).
Merge branch 'T27472-FiberStatistics'
Jun 9 2020, 2:01 PM
neher committed rMITKDIFFa304c33c6e87: Updated cmdapp description (authored by neher).
Updated cmdapp description
Jun 9 2020, 2:00 PM
neher closed T27472: Implement print fiber statistics cmdapp as Resolved.
Jun 9 2020, 11:30 AM · MITK Diffusion
neher committed rMITKDIFF8d2461f66b98: Merge branch 'T27472-FiberStatistics' (authored by neher).
Merge branch 'T27472-FiberStatistics'
Jun 9 2020, 10:59 AM
neher committed rMITKDIFF271ea12347d0: Add fiber statistics cmdapp (authored by neher).
Add fiber statistics cmdapp
Jun 9 2020, 10:58 AM
neher added a comment to T27472: Implement print fiber statistics cmdapp.

Pushed new branch T27472-FiberStatistics.

Jun 9 2020, 10:58 AM · MITK Diffusion
neher triaged T27472: Implement print fiber statistics cmdapp as Wishlist priority.
Jun 9 2020, 10:57 AM · MITK Diffusion

May 28 2020

neher added a comment to T26721: Prepare Qt 5.13 compatibility.

When using Qt 5.13 on Ubuntu 20.04 I had no issues with our third party libraries, only a lot of deprecated warnings as errors in MITK and other minor issues.

May 28 2020, 7:32 AM · MITK

May 26 2020

neher reopened T22976: Add gifti/cifti file support as "Open".
May 26 2020, 2:02 PM · Auto-closed, MITK
neher claimed T22976: Add gifti/cifti file support.
May 26 2020, 2:02 PM · Auto-closed, MITK

May 15 2020

neher closed T27426: IVIM cmdapp should provide all fits as Resolved.
May 15 2020, 2:17 PM · MITK Diffusion
neher committed rMITKDIFF14fb9c209ad8: Merge branch 'T27426-IvimFits' (authored by neher).
Merge branch 'T27426-IvimFits'
May 15 2020, 2:16 PM
neher committed rMITKDIFF29b43221d388: All fits available (authored by neher).
All fits available
May 15 2020, 2:16 PM
neher added a comment to T27426: IVIM cmdapp should provide all fits.

Pushed new branch T27426-IvimFits.

May 15 2020, 2:16 PM · MITK Diffusion
neher triaged T27426: IVIM cmdapp should provide all fits as Normal priority.
May 15 2020, 2:15 PM · MITK Diffusion

May 14 2020

neher closed T27417: Fix readers as Resolved.
May 14 2020, 9:40 AM · MITK Diffusion
neher lowered the priority of T26056: [MITK Diffusion] Integrated MIC Bet update in MITK Diffusion from High to Normal.
May 14 2020, 9:24 AM · MITK Diffusion
neher lowered the priority of T26879: Account for voxel size in TRK header matrix from Normal to Low.
May 14 2020, 9:24 AM · MITK Diffusion
neher raised the priority of T26879: Account for voxel size in TRK header matrix from Low to Normal.
May 14 2020, 9:24 AM · MITK Diffusion
neher lowered the priority of T26879: Account for voxel size in TRK header matrix from Normal to Low.
May 14 2020, 9:24 AM · MITK Diffusion
neher lowered the priority of T27070: Planar figure to image fails from High to Normal.
May 14 2020, 9:24 AM · MITK Diffusion
neher triaged T27419: Fix dartclient documentation build as High priority.
May 14 2020, 9:24 AM · MITK Diffusion
neher raised the priority of T27417: Fix readers from High to Unbreak Now!.
May 14 2020, 9:23 AM · MITK Diffusion
neher committed rMITKDIFF0653d492a577: Merge branch 'T27417-FixReaders' (authored by neher).
Merge branch 'T27417-FixReaders'
May 14 2020, 8:25 AM
neher committed rMITKDIFFe11dd618dc39: Read --> DoRead (authored by neher).
Read --> DoRead
May 14 2020, 8:24 AM
neher added a comment to T27417: Fix readers.

Pushed new branch T27417-FixReaders.

May 14 2020, 8:24 AM · MITK Diffusion
neher triaged T27417: Fix readers as High priority.
May 14 2020, 8:23 AM · MITK Diffusion

May 13 2020

neher added a comment to T26415: Python plugin fails to run on Windows.

The python plugin seems to work fine on windows 10

May 13 2020, 10:46 AM · Auto-closed, MITK
neher lowered the priority of T26960: Fiber mapper test fails from Unbreak Now! to High.
May 13 2020, 10:27 AM · MITK Diffusion
neher raised the priority of T26960: Fiber mapper test fails from Normal to Unbreak Now!.
May 13 2020, 10:27 AM · MITK Diffusion
neher raised the priority of T27070: Planar figure to image fails from Normal to High.
May 13 2020, 10:27 AM · MITK Diffusion
neher moved T24297: Refactor mitkRawShModel from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T24973: Add bias fields from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T25001: Add proton density maps from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26062: Implement parallel imaging from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26061: Implement 3D sequences from Fiberfox 3D sequences to Implement 3D sequences.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26061: Implement 3D sequences from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26180: Implement readout gradient dephasing from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26180: Implement readout gradient dephasing from Fiberfox: implement readout gradient dephasing to Implement readout gradient dephasing.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26124: Add new systematic fiberfox tests from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26281: Simulation without fibers, only VFMs from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26281: Simulation without fibers, only VFMs from Fiberfox: simulation without fibers, only VFMs to Simulation without fibers, only VFMs.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26879: Account for voxel size in TRK header matrix from Accoutn for voxel size in TRK header matrix to Account for voxel size in TRK header matrix.
May 13 2020, 10:25 AM · MITK Diffusion
neher moved T27342: Implement gyral-shape fiber ending in fiberfox from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:25 AM · MITK Diffusion
neher closed T27381: Add fiber weighting to coloring in processing view as Resolved.
May 13 2020, 10:25 AM · MITK Diffusion
neher renamed T23701: Refactor OdfVtkMapper2D from [MITK Diffusion] Refactor OdfVtkMapper2D to Refactor OdfVtkMapper2D.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T24297: Refactor mitkRawShModel from [MITK Diffusion] Refactor mitkRawShModel to Refactor mitkRawShModel.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T24973: Add bias fields from [MITK Diffusion] Add bias field to fiberfox to Add bias fields.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T25001: Add proton density maps from [Fiberfox] Add proton density maps to Add proton density maps.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T25501: Implement 3D visualization of parcellation images from [MITK Diffusion] Implement 3D visualization of parcellation images to Implement 3D visualization of parcellation images.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T25567: Data quality analysis from [MITK Diffusion] Data quality analysis to Data quality analysis .
May 13 2020, 10:23 AM · MITK Diffusion
neher renamed T26061: Implement 3D sequences from [MITK Diffusion] Fiberfox 3D sequences to Fiberfox 3D sequences.
May 13 2020, 10:23 AM · MITK Diffusion