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May 13 2020

neher added a comment to T26415: Python plugin fails to run on Windows.

The python plugin seems to work fine on windows 10

May 13 2020, 10:46 AM · Auto-closed, MITK
kleina committed rOBSHYPPOPY24436615c9c6: Fixed typo. (authored by kleina).
Fixed typo.
May 13 2020, 10:34 AM
kleina committed rOBSHYPPOPYc5ef45302a73: loss_function_batch works for now, but only receives one candidate. Have to… (authored by kleina).
loss_function_batch works for now, but only receives one candidate. Have to…
May 13 2020, 10:34 AM
kompan triaged T27153: Fit CRMO2-model to mean value of ROI as Normal priority.
May 13 2020, 10:32 AM · Restricted Project
neher lowered the priority of T26960: Fiber mapper test fails from Unbreak Now! to High.
May 13 2020, 10:27 AM · MITK Diffusion
neher raised the priority of T26960: Fiber mapper test fails from Normal to Unbreak Now!.
May 13 2020, 10:27 AM · MITK Diffusion
neher raised the priority of T27070: Planar figure to image fails from Normal to High.
May 13 2020, 10:27 AM · MITK Diffusion
neher moved T24297: Refactor mitkRawShModel from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T24973: Add bias fields from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T25001: Add proton density maps from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26062: Implement parallel imaging from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26061: Implement 3D sequences from Fiberfox 3D sequences to Implement 3D sequences.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26061: Implement 3D sequences from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26180: Implement readout gradient dephasing from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26180: Implement readout gradient dephasing from Fiberfox: implement readout gradient dephasing to Implement readout gradient dephasing.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26124: Add new systematic fiberfox tests from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher moved T26281: Simulation without fibers, only VFMs from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26281: Simulation without fibers, only VFMs from Fiberfox: simulation without fibers, only VFMs to Simulation without fibers, only VFMs.
May 13 2020, 10:26 AM · MITK Diffusion
neher renamed T26879: Account for voxel size in TRK header matrix from Accoutn for voxel size in TRK header matrix to Account for voxel size in TRK header matrix.
May 13 2020, 10:25 AM · MITK Diffusion
neher moved T27342: Implement gyral-shape fiber ending in fiberfox from Backlog to Fiberfox on the MITK Diffusion board.
May 13 2020, 10:25 AM · MITK Diffusion
neher closed T27381: Add fiber weighting to coloring in processing view as Resolved.
May 13 2020, 10:25 AM · MITK Diffusion
neher renamed T23701: Refactor OdfVtkMapper2D from [MITK Diffusion] Refactor OdfVtkMapper2D to Refactor OdfVtkMapper2D.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T24297: Refactor mitkRawShModel from [MITK Diffusion] Refactor mitkRawShModel to Refactor mitkRawShModel.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T24973: Add bias fields from [MITK Diffusion] Add bias field to fiberfox to Add bias fields.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T25001: Add proton density maps from [Fiberfox] Add proton density maps to Add proton density maps.
May 13 2020, 10:24 AM · MITK Diffusion
kislinsk added a project to T27188: [ImageStatistics] mitkImageStatisticsCalculatorTest fails on some platforms: Missing Info.

We need specific information of the test failures and if they are the same thing.

May 13 2020, 10:24 AM · Cleared, MITK (v2021.02), Restricted Project, CI
neher renamed T25501: Implement 3D visualization of parcellation images from [MITK Diffusion] Implement 3D visualization of parcellation images to Implement 3D visualization of parcellation images.
May 13 2020, 10:24 AM · MITK Diffusion
neher renamed T25567: Data quality analysis from [MITK Diffusion] Data quality analysis to Data quality analysis .
May 13 2020, 10:23 AM · MITK Diffusion
neher renamed T26061: Implement 3D sequences from [MITK Diffusion] Fiberfox 3D sequences to Fiberfox 3D sequences.
May 13 2020, 10:23 AM · MITK Diffusion
neher renamed T26062: Implement parallel imaging from [MITK Diffusion] Implement parallel imaging to Implement parallel imaging.
May 13 2020, 10:23 AM · MITK Diffusion
neher renamed T26124: Add new systematic fiberfox tests from [MITK Diffusion] Add new systematic fiberfox tests to Add new systematic fiberfox tests.
May 13 2020, 10:23 AM · MITK Diffusion
neher renamed T26180: Implement readout gradient dephasing from [MITK Diffusion] Fiberfox: implement readout gradient dephasing to Fiberfox: implement readout gradient dephasing.
May 13 2020, 10:23 AM · MITK Diffusion
neher renamed T26281: Simulation without fibers, only VFMs from [MITK Diffusion] Fiberfox: simulation without fibers, only VFMs to Fiberfox: simulation without fibers, only VFMs.
May 13 2020, 10:22 AM · MITK Diffusion
neher edited projects for T23701: Refactor OdfVtkMapper2D, added: MITK Diffusion; removed MITK.
May 13 2020, 10:21 AM · MITK Diffusion
kompan added a project to T26288: MRI Perfusion view should only generate concentration images once: Cleared.
May 13 2020, 10:21 AM · MITK (v2024.06), Cleared
neher edited projects for T24297: Refactor mitkRawShModel, added: MITK Diffusion; removed MITK.
May 13 2020, 10:21 AM · MITK Diffusion
neher edited projects for T24973: Add bias fields, added: MITK Diffusion; removed MITK.
May 13 2020, 10:21 AM · MITK Diffusion
kompan added a project to T27047: Perfusion- Conversion from signal to concentration: Rename Using T1-map: Cleared.
May 13 2020, 10:21 AM · Cleared, MITK (v2021.02)
kislinsk added a project to T27181: MITK - DICOM Seg - not saved when started without terminal: Cleared.
May 13 2020, 10:21 AM · Cleared, MITK (v2021.02)
neher renamed T25001: Add proton density maps from [MITK Diffusion] Add proton density maps to [Fiberfox] Add proton density maps.
May 13 2020, 10:21 AM · MITK Diffusion
kompan added a project to T27350: Refactoring of T1 map calculation/selection for perfusion and CEST: Cleared.
May 13 2020, 10:21 AM · MITK (v2024.06)
kompan added a project to T27351: Can start parameters be provided as an image of starting values in the DCE Perfusion DataFit View?: Cleared.
May 13 2020, 10:20 AM · Cleared, MITK (v2021.02)
neher edited projects for T25001: Add proton density maps, added: MITK Diffusion; removed MITK.
May 13 2020, 10:20 AM · MITK Diffusion
kompan added a project to T27106: [MITKDoc] Revise Volume Visualization Plugin Documentation: Cleared.
May 13 2020, 10:20 AM · Cleared, MITK (v2021.02)
kompan added a project to T27103: [MITKDoc] Revise Point Set Interaction Plugin Documentation: Cleared.
May 13 2020, 10:20 AM · Cleared, MITK (v2021.02)
neher edited projects for T25501: Implement 3D visualization of parcellation images, added: MITK Diffusion; removed MITK.
May 13 2020, 10:20 AM · MITK Diffusion
kompan added a project to T27102: [MITKDoc] Revise Movie Maker Plugin Documentation: Cleared.
May 13 2020, 10:20 AM · Cleared, MITK (v2021.02)
neher edited projects for T25567: Data quality analysis , added: MITK Diffusion; removed MITK.
May 13 2020, 10:20 AM · MITK Diffusion
kompan added a project to T27098: [MITKDoc] Revise Image Cropper Plugin Documentation: Cleared.
May 13 2020, 10:20 AM · Cleared, MITK (v2021.02)
neher raised the priority of T26056: [MITK Diffusion] Integrated MIC Bet update in MITK Diffusion from Wishlist to High.

Maybe wait for Kim's python project

May 13 2020, 10:19 AM · MITK Diffusion
neher edited projects for T26056: [MITK Diffusion] Integrated MIC Bet update in MITK Diffusion, added: MITK Diffusion; removed MITK.
May 13 2020, 10:19 AM · MITK Diffusion
neher edited projects for T26061: Implement 3D sequences, added: MITK Diffusion; removed MITK.
May 13 2020, 10:18 AM · MITK Diffusion
neher edited projects for T26062: Implement parallel imaging, added: MITK Diffusion; removed MITK.
May 13 2020, 10:18 AM · MITK Diffusion
neher edited projects for T26124: Add new systematic fiberfox tests, added: MITK Diffusion; removed MITK.
May 13 2020, 10:18 AM · MITK Diffusion
neher edited projects for T26180: Implement readout gradient dephasing, added: MITK Diffusion; removed MITK.
May 13 2020, 10:17 AM · MITK Diffusion
neher edited projects for T26281: Simulation without fibers, only VFMs, added: MITK Diffusion; removed MITK.
May 13 2020, 10:17 AM · MITK Diffusion
neher closed T26153: [MITK Diffusion] Fiberfox simulate frequency and phase encoding gradients as Invalid.
May 13 2020, 10:17 AM · MITK
kompan added a project to T27100: [MITKDoc] Revise DataManager Plugin Documentation: Cleared.
May 13 2020, 10:14 AM · Cleared, MITK (v2021.02)
kompan added a project to T27099: [MITKDoc] Revise Clipping Plane Plugin Documentation: Cleared.
May 13 2020, 10:13 AM · MITK (v2024.06), Cleared
kompan added a project to T27101: [MITKDoc] Revise Logging Plugin Documentation: Cleared.
May 13 2020, 10:13 AM · Cleared, MITK (v2021.02)
kompan added a project to T27104: [MITKDoc] Revise Modelfit Plugin Documentation: Cleared.
May 13 2020, 10:13 AM · Cleared, MITK (v2021.02)
kompan added a project to T27107: [MITKDoc] Revise Screenshot Maker Plugin Documentation: Cleared.
May 13 2020, 10:13 AM · Cleared, MITK (v2021.02)
kompan added a project to T27093: [MITKDoc] Revise Segmentation Plugin: Cleared.
May 13 2020, 10:13 AM · MITK (v2021.02)
kompan added a project to T27094: [MITKDoc] Revise Segmentation Utilities Plugin Documentation: Cleared.
May 13 2020, 10:12 AM · Cleared, MITK (v2021.02)
kompan added a project to T27096: [MITKDoc] Revise MultiLabel Segmentation Utilities Plugin Documentation: Cleared.
May 13 2020, 10:12 AM · MITK (v2021.02)
kompan added a project to T27117: [MITKDoc] Revise Matchpoint Algorithm Control Plugin Documentation: Cleared.
May 13 2020, 10:12 AM · Cleared, MITK (v2021.02)
kompan added a project to T27116: [MITKDoc] Revise Matchpoint Algorithm Browser Plugin Documentation: Cleared.
May 13 2020, 10:12 AM · Cleared, MITK (v2021.02)
kompan added a project to T27115: [MITKDoc] Revise Matchpoint Frame Correction Plugin Documentation: Cleared.
May 13 2020, 10:11 AM · Cleared, MITK (v2021.02)
kompan added a project to T27111: [MITKDoc] Revise Matchpoint Registration Visualizer Plugin Documentation: Cleared.
May 13 2020, 10:11 AM · Cleared, MITK (v2021.02)
kompan added a project to T27114: [MITKDoc] Revise Matchpoint Mapper Plugin Documentation: Cleared.
May 13 2020, 10:10 AM · Cleared, MITK (v2021.02)
kompan added a project to T27112: [MITKDoc] Revise Matchpoint Registration Evaluator Plugin Documentation: Cleared.
May 13 2020, 10:10 AM · Cleared, MITK (v2021.02)
kompan added a project to T27113: [MITKDoc] Revise Matchpoint Registration Manipulator Plugin Documentation: Cleared.
May 13 2020, 10:10 AM · Cleared, MITK (v2021.02)
kompan added a project to T27095: [MITKDoc] Revise MultiLabel Segmentation Plugin Documentation: Cleared.
May 13 2020, 10:10 AM · MITK (v2021.02)
kompan added a project to T27097: [MITKDoc] Revise Statistics Plugin Documentation: Cleared.
May 13 2020, 10:09 AM · Cleared, MITK (v2021.02)
kompan added a project to T27105: [MITKDoc] Revise Measurement Plugin Documentation: Cleared.
May 13 2020, 10:09 AM · Cleared, MITK (v2021.02)
kompan added a project to T27109: [MITKDoc] Revise Properties Plugin Documentation: Cleared.
May 13 2020, 10:09 AM · Cleared, MITK (v2021.02)
kompan added a project to T27110: [MITKDoc] Revise Command Line Tool/ Automatisation Plugin Documentation: Cleared.
May 13 2020, 10:09 AM · Cleared, MITK (v2021.02)

May 12 2020

eisenman committed rCHALLENGER878b2d589204: Adapt ranking heatmap plot to multi-task data set format (authored by eisenman).
Adapt ranking heatmap plot to multi-task data set format
May 12 2020, 11:29 PM
eisenman committed rCHALLENGER7d6205b24254: Adapt podium plot to multi-task data set format (authored by eisenman).
Adapt podium plot to multi-task data set format
May 12 2020, 11:29 PM
eisenman triaged T27408: Description of cluster analysis contains unnecessary symbol as High priority.
May 12 2020, 11:16 PM · challengeR (v1.0)
eisenman triaged T27301: Add on boarding tutorial as High priority.
May 12 2020, 10:49 PM · challengeR (v1.0)
eisenman triaged T27302: Add sections to the readme as High priority.
May 12 2020, 10:49 PM · challengeR (v1.0)
eisenman triaged T27404: Fix the 2.1 section title format of the report as High priority.
May 12 2020, 10:49 PM · challengeR (v1.0)
eisenman triaged T27241: Readme improvements as High priority.
May 12 2020, 10:48 PM · challengeR (v1.0)
eisenman triaged T27407: Warnings are shown in multi-task challenge report for violin plot as High priority.
May 12 2020, 10:47 PM · challengeR (v1.0)
floca added projects to T27357: Check/Update DICOMTags of interest: HiGHmed, Cleared.
May 12 2020, 8:20 PM · MITK (v2024.06), Cleared, HiGHmed
kleina committed rOBSHYPPOPY9fe2f8e9cfe3: added some outputs. (authored by kleina).
added some outputs.
May 12 2020, 7:21 PM
kleina committed rOBSHYPPOPY8bd563379684: added new line at end of file. (authored by kleina).
added new line at end of file.
May 12 2020, 7:21 PM
kleina committed rOBSHYPPOPY6721f6cf30c6: add custom pmap function for optunitysolver. Overwrite loss_function_batch (authored by kleina).
add custom pmap function for optunitysolver. Overwrite loss_function_batch
May 12 2020, 7:21 PM
kleina committed rOBSHYPPOPYed27cde65b31: Switch to SolverPool in mpiplayground. Try optunity. (authored by kleina).
Switch to SolverPool in mpiplayground. Try optunity.
May 12 2020, 7:21 PM
floca committed rMITKc0f884b289ec: Fixed T27406 - TemporoSpatialStringProperty::IsUniform (authored by floca).
Fixed T27406 - TemporoSpatialStringProperty::IsUniform
May 12 2020, 5:52 PM
floca committed rMITK5aed82009230: Fixed T27406 (authored by floca).
Fixed T27406
May 12 2020, 5:52 PM
floca closed T27406: Add TemporoSpatialStringProperty::IsUniform() method as Resolved by committing rMITK5aed82009230: Fixed T27406.
May 12 2020, 5:52 PM · MITK
floca closed T27406: Add TemporoSpatialStringProperty::IsUniform() method, a subtask of T27341: Extend Classification classes and software stack to produce more structured results, as Resolved.
May 12 2020, 5:52 PM · Breaking Change, Noteworthy, HiGHmed, MITK
eisenman committed rCHALLENGER3e7a90c0eaec: Adapt rank-then-aggregate tests to multi-task data set format (authored by eisenman).
Adapt rank-then-aggregate tests to multi-task data set format
May 12 2020, 4:06 PM
eisenman committed rCHALLENGERe866161b1ecd: Check for invalid NA treatment option in multi-task data set (authored by eisenman).
Check for invalid NA treatment option in multi-task data set
May 12 2020, 3:56 PM
eisenman committed rCHALLENGER6b6b6e59e0ea: Adapt aggregate-than-rank tests to multi-task data set format (authored by eisenman).
Adapt aggregate-than-rank tests to multi-task data set format
May 12 2020, 3:56 PM
floca renamed T27406: Add TemporoSpatialStringProperty::IsUniform() method from Add TemporoSpatialProperty::IsUniform() method to Add TemporoSpatialStringProperty::IsUniform() method.
May 12 2020, 3:38 PM · MITK
floca added a revision to T27406: Add TemporoSpatialStringProperty::IsUniform() method: Restricted Differential Revision.
May 12 2020, 3:38 PM · MITK
eisenman committed rCHALLENGER8838dfaba572: Transform single-task data set into multi-task data set including one task (authored by eisenman).
Transform single-task data set into multi-task data set including one task
May 12 2020, 3:14 PM