Page MenuHomePhabricator
Feed All Stories

Aug 5 2020

floca removed a project from T27649: [Segmentation] How should tools listen to time changes: Request for Discussion.

Discussion result: we go for #2 and refactor #1 out of the tools.

Aug 5 2020, 11:57 AM · MITK (v2021.02)
neher closed T27651: error loading .bvec files as Resolved.
Aug 5 2020, 11:39 AM · MITK Diffusion
neher committed rMITKDIFF1e8c9a8df972: Merge branch 'T27651-BvecFiles' (authored by neher).
Merge branch 'T27651-BvecFiles'
Aug 5 2020, 11:38 AM
neher committed rMITKDIFF010fb9d4e80b: Loading bvec files is now possible (authored by neher).
Loading bvec files is now possible
Aug 5 2020, 11:38 AM
neher added a comment to T27651: error loading .bvec files.

Pushed new branch T27651-BvecFiles.

Aug 5 2020, 11:38 AM · MITK Diffusion
neher triaged T27651: error loading .bvec files as Normal priority.
Aug 5 2020, 11:37 AM · MITK Diffusion
floca moved T27143: Matchpoint Registration Evaluator- Colorblend Bug from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Aug 5 2020, 11:22 AM · Cleared, MITK (v2021.02), Restricted Project
floca moved T27545: Extract MITK Workbench intro part from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Aug 5 2020, 11:22 AM · Noteworthy, Restricted Project, Restricted Project, MITK
floca moved T27649: [Segmentation] How should tools listen to time changes from Backlog to Segmentation on the MITK (v2021.02) board.
Aug 5 2020, 11:10 AM · MITK (v2021.02)
floca closed T27621: [Segmentation] 3D Threshold / UL Threshold does not use a timestep != 0 for static masks, a subtask of T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation, as Resolved.
Aug 5 2020, 11:10 AM · MITK (v2021.10), Missing Info, Restricted Project
floca closed T27621: [Segmentation] 3D Threshold / UL Threshold does not use a timestep != 0 for static masks as Resolved.
Aug 5 2020, 11:10 AM · Restricted Project, Cleared, MITK (v2021.02)
floca closed T27622: [Segmentation] Make 3D Threshold / UL Threshold only for on a single timestep for a dynamic mask, a subtask of T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation, as Resolved.
Aug 5 2020, 11:10 AM · MITK (v2021.10), Missing Info, Restricted Project
floca closed T27622: [Segmentation] Make 3D Threshold / UL Threshold only for on a single timestep for a dynamic mask as Resolved.
Aug 5 2020, 11:10 AM · Restricted Project, Cleared, MITK (v2021.02)
gaoh added a member for SIDT: s669m.
Aug 5 2020, 10:22 AM
gaoh added a member for Kaapana (internal): s669m.
Aug 5 2020, 10:21 AM
floca committed rMITK08619e4fc4b8: T27621/T27622 - Corrected threshold tools (authored by floca).
T27621/T27622 - Corrected threshold tools
Aug 5 2020, 10:20 AM
floca committed rMITK5f96821de19f: Fixed review remarks. (authored by floca).
Fixed review remarks.
Aug 5 2020, 10:20 AM
floca committed rMITKc03ca0616159: Handeled unused variables (gcc error) (authored by floca).
Handeled unused variables (gcc error)
Aug 5 2020, 10:20 AM
floca committed rMITK4408a8ff26b0: Removed unnecessary call (authored by floca).
Removed unnecessary call
Aug 5 2020, 10:20 AM
floca committed rMITK703af31f270f: Refactored threshold tools to remove redundant code (authored by floca).
Refactored threshold tools to remove redundant code
Aug 5 2020, 10:20 AM
floca committed rMITKb9bfb2ec4e41: Corrected mitk::AutoSegmentationTool::GetTargetSegmentationNode() to use the… (authored by floca).
Corrected mitk::AutoSegmentationTool::GetTargetSegmentationNode() to use the…
Aug 5 2020, 10:20 AM
floca committed rMITK179b53dfa7bb: Improved usablility of threshold tools (authored by floca).
Improved usablility of threshold tools
Aug 5 2020, 10:20 AM
floca committed rMITK13895dc2f6b7: first draft of threshold tool that behaves correctly time point aware now. (authored by floca).
first draft of threshold tool that behaves correctly time point aware now.
Aug 5 2020, 10:20 AM
floca committed rMITK83f54f57a53c: Add (event) support for current time point change to toolmanager (authored by floca).
Add (event) support for current time point change to toolmanager
Aug 5 2020, 10:20 AM
kompan added a revision to T27619: MR Perfusion: Use model fit result relation rules for predicate definition: Unknown Object (Differential Revision).
Aug 5 2020, 9:51 AM · Cleared, MITK (v2021.02)
neher closed T27647: Fix dicom module renaming and rest module dep as Resolved.
Aug 5 2020, 8:21 AM · MITK Diffusion
neher committed rMITKDIFF4bd1b5fe32b7: Merge branch 'T27647-DicomModuleFix' (authored by neher).
Merge branch 'T27647-DicomModuleFix'
Aug 5 2020, 8:19 AM
neher committed rMITKDIFF29354b30dfdb: add dev breaking changes (authored by neher).
add dev breaking changes
Aug 5 2020, 8:18 AM
neher added a comment to T27647: Fix dicom module renaming and rest module dep.

Pushed new branch T27647-DicomModuleFix.

Aug 5 2020, 8:18 AM · MITK Diffusion

Aug 4 2020

kislinsk added a comment to T25882: Rewrite dashboard script for CDash 2.6.

Pushed new branch bugfix/T25882-RewriteDashboardScript.

Aug 4 2020, 10:07 PM · CI, MITK (v2021.02), Restricted Project
floca triaged T27649: [Segmentation] How should tools listen to time changes as Unbreak Now! priority.
Aug 4 2020, 9:41 PM · MITK (v2021.02)
floca reopened T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation as "Open".

@thomass / @kalali : what i just realized. Did you also checked the automated 2D tools (like fast marching 2D)? Or only the 3D tools?

Aug 4 2020, 9:01 PM · MITK (v2021.10), Missing Info, Restricted Project
floca claimed T18436: [Segmentation] Fast Marching 3D Tool only supported for first time step in 4D images.
Aug 4 2020, 8:56 PM · MITK (v2021.02), Bugzilla
floca moved T18436: [Segmentation] Fast Marching 3D Tool only supported for first time step in 4D images from Backlog to Segmentation on the MITK (v2021.02) board.
Aug 4 2020, 8:45 PM · MITK (v2021.02), Bugzilla
floca raised the priority of T18436: [Segmentation] Fast Marching 3D Tool only supported for first time step in 4D images from Normal to High.
Aug 4 2020, 8:45 PM · MITK (v2021.02), Bugzilla
floca moved T27641: [Segmentation] Watershed does always generate a 3D static seg. Even if dynamic segmentation was generated. from Backlog to Segmentation on the MITK (v2021.02) board.
Aug 4 2020, 8:44 PM · Cleared, MITK (v2021.02)
floca committed rMITKeed36131e0f8: T27117 Revised the docu of matchpoint.algorithm.control (authored by floca).
T27117 Revised the docu of matchpoint.algorithm.control
Aug 4 2020, 5:19 PM
floca closed T27117: [MITKDoc] Revise Matchpoint Algorithm Control Plugin Documentation as Resolved by committing rMITKeed36131e0f8: T27117 Revised the docu of matchpoint.algorithm.control.
Aug 4 2020, 5:19 PM · Cleared, MITK (v2021.02)
floca added a revision to T27634: [Registration] Crash at application closure when Registration Manipulator or Evaluator is active: Unknown Object (Differential Revision).
Aug 4 2020, 5:05 PM · MITK (v2021.02)
floca committed rMITK70d153bbd471: Prevented crash on application closure. Fixed T27634 (authored by floca).
Prevented crash on application closure. Fixed T27634
Aug 4 2020, 5:05 PM
floca committed rMITKa74c5b452c76: Prevented crash on application closure. (authored by floca).
Prevented crash on application closure.
Aug 4 2020, 5:04 PM
floca closed T27634: [Registration] Crash at application closure when Registration Manipulator or Evaluator is active as Resolved by committing rMITKa74c5b452c76: Prevented crash on application closure..
Aug 4 2020, 5:04 PM · MITK (v2021.02)
neher triaged T27647: Fix dicom module renaming and rest module dep as High priority.
Aug 4 2020, 4:33 PM · MITK Diffusion
neher closed T27644: Visualize tractometry binning as Resolved.
Aug 4 2020, 2:46 PM · MITK Diffusion
thomass triaged T27646: [Data manager] Option to change color of segmentation disappeared in data manager as Normal priority.
Aug 4 2020, 2:31 PM · Auto-closed, Request for Discussion, MITK
neher committed rMITKDIFF5c25c9c1056c: Merge branch 'T27644-TractometryBinning' (authored by neher).
Merge branch 'T27644-TractometryBinning'
Aug 4 2020, 2:25 PM
neher committed rMITKDIFF41104a673019: Added centroid based binning (authored by neher).
Added centroid based binning
Aug 4 2020, 2:25 PM

Aug 3 2020

neher committed rMITKDIFF4c72d53fc1ad: Add coloring basic (authored by neher).
Add coloring basic
Aug 3 2020, 4:11 PM
neher added a comment to T27644: Visualize tractometry binning.

Pushed new branch T27644-TractometryBinning.

Aug 3 2020, 4:11 PM · MITK Diffusion
neher triaged T27644: Visualize tractometry binning as Wishlist priority.
Aug 3 2020, 3:53 PM · MITK Diffusion
floca edited projects for T24775: Refactor plugins to use the new node selection widgets, added: MITK; removed MITK (v2021.02).
Aug 3 2020, 1:30 PM · MITK, Restricted Project, Cleared
kalali committed rMITK936b789bbc0a: Refactor DeformableClippingPlane plugin to use the new node selection widgets (authored by kalali).
Refactor DeformableClippingPlane plugin to use the new node selection widgets
Aug 3 2020, 1:13 PM
kalali committed rMITK540a9ae22d0d: Ensure color components to be <= 1.0f (authored by kalali).
Ensure color components to be <= 1.0f
Aug 3 2020, 1:13 PM
kalali committed rMITK3accc287f87d: Add more const-correctness (authored by kalali).
Add more const-correctness
Aug 3 2020, 1:13 PM
kalali committed rMITK0b78143eecdf: Simplify function and make it more readable (authored by kalali).
Simplify function and make it more readable
Aug 3 2020, 1:13 PM
kalali committed rMITKd074f7074a76: Simplify condition to enable UI element (group box) (authored by kalali).
Simplify condition to enable UI element (group box)
Aug 3 2020, 1:13 PM
kalali committed rMITK52360025467c: Simplify for-loop and change style (authored by kalali).
Simplify for-loop and change style
Aug 3 2020, 1:13 PM
kalali committed rMITK9443f151d240: Make nullptr check more visible (authored by kalali).
Make nullptr check more visible
Aug 3 2020, 1:13 PM
kalali committed rMITKc63c38d0ab16: Use auto (authored by kalali).
Use auto
Aug 3 2020, 1:13 PM
kalali committed rMITK41eed2598243: Fix missing "this" pointer (authored by kalali).
Fix missing "this" pointer
Aug 3 2020, 1:13 PM
kalali committed rMITK13e2b28d1f68: Use mitk numeric constant (authored by kalali).
Use mitk numeric constant
Aug 3 2020, 1:12 PM
kalali committed rMITK130dcde2604e: Move controls initialization to constructor initializer list (authored by kalali).
Move controls initialization to constructor initializer list
Aug 3 2020, 1:12 PM
kalali committed rMITK27164bacf476: Simplify string comparison (authored by kalali).
Simplify string comparison
Aug 3 2020, 1:12 PM
kalali committed rMITK1a203b8744af: Use const ref value for the list of nodes (authored by kalali).
Use const ref value for the list of nodes
Aug 3 2020, 1:12 PM
kalali updated the task description for T24775: Refactor plugins to use the new node selection widgets.
Aug 3 2020, 1:12 PM · MITK, Restricted Project, Cleared
kalali committed rMITKc0bab37190df: Change include type (authored by kalali).
Change include type
Aug 3 2020, 1:12 PM
kalali committed rMITK360cbd97d8b1: Use explicit type (authored by kalali).
Use explicit type
Aug 3 2020, 1:12 PM
kalali closed T27595: Refactor DeformableClippingPlane plugin to use the new node selection widgets, a subtask of T24775: Refactor plugins to use the new node selection widgets, as Resolved.
Aug 3 2020, 1:12 PM · MITK, Restricted Project, Cleared
kalali committed rMITKd8fab84f37d5: Use const iterator (authored by kalali).
Use const iterator
Aug 3 2020, 1:12 PM
kalali closed T27595: Refactor DeformableClippingPlane plugin to use the new node selection widgets as Resolved.
Aug 3 2020, 1:12 PM · Cleared, MITK (v2021.02)
kalali committed rMITKa46a421d410e: Fix unused parameter (authored by kalali).
Fix unused parameter
Aug 3 2020, 1:12 PM
kalali committed rMITK7b75d1810240: Fix error with hidden virtual function (authored by kalali).
Fix error with hidden virtual function
Aug 3 2020, 1:12 PM
kalali committed rMITKfc60fc85e4b0: Modify UI to include single node selection widget (authored by kalali).
Modify UI to include single node selection widget
Aug 3 2020, 1:12 PM
kalali committed rMITKfc88c26aa74c: Clean code: use auto, define node predicates (authored by kalali).
Clean code: use auto, define node predicates
Aug 3 2020, 1:12 PM
kalali committed rMITK85bd2c3a02e7: Use new Qt5 signal-slot syntax (authored by kalali).
Use new Qt5 signal-slot syntax
Aug 3 2020, 1:12 PM
kalali committed rMITKa67b507f168c: Clean class: reorder functions, fix style, remove comments (authored by kalali).
Clean class: reorder functions, fix style, remove comments
Aug 3 2020, 1:12 PM
thomass added a comment to T27641: [Segmentation] Watershed does always generate a 3D static seg. Even if dynamic segmentation was generated..

Test image: 3D+t Heart

Aug 3 2020, 9:49 AM · Cleared, MITK (v2021.02)
thomass closed T27642: [Segmentation] Watershed segmentation always creates a second segmentation which is 3D even if the image is 4D and dynamic as Invalid.

duplicate to T27641

Aug 3 2020, 9:49 AM · MITK (v2021.02)
floca removed a project from T27641: [Segmentation] Watershed does always generate a 3D static seg. Even if dynamic segmentation was generated.: Restricted Project.
Aug 3 2020, 9:47 AM · Cleared, MITK (v2021.02)
thomass triaged T27642: [Segmentation] Watershed segmentation always creates a second segmentation which is 3D even if the image is 4D and dynamic as High priority.
Aug 3 2020, 9:47 AM · MITK (v2021.02)
floca placed T27641: [Segmentation] Watershed does always generate a 3D static seg. Even if dynamic segmentation was generated. up for grabs.
Aug 3 2020, 9:47 AM · Cleared, MITK (v2021.02)
floca triaged T27641: [Segmentation] Watershed does always generate a 3D static seg. Even if dynamic segmentation was generated. as High priority.
Aug 3 2020, 9:46 AM · Cleared, MITK (v2021.02)
thomass added a comment to T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation.

You totally right and the reason why I oversaw this is when I double checked:

Aug 3 2020, 9:43 AM · MITK (v2021.10), Missing Info, Restricted Project
neher triaged T27640: Segmentation cannot handle signed images as Normal priority.
Aug 3 2020, 8:52 AM · Auto-closed, MITK

Aug 2 2020

floca added a comment to T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation.

All issues have been adressed in respective subtasks.

Aug 2 2020, 9:37 PM · MITK (v2021.10), Missing Info, Restricted Project
thomass closed T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation as Resolved.

All issues have been adressed in respective subtasks.

Aug 2 2020, 5:26 PM · MITK (v2021.10), Missing Info, Restricted Project
thomass closed T26840: Mission Homepage Reorganization as Resolved.
Aug 2 2020, 4:05 PM · MITK
kislinsk added a comment to T25882: Rewrite dashboard script for CDash 2.6.

The This build already has a configure error in the CDash log file is triggered because we submit the Configure part twice: for the superbuild and for the MITK-build. However, it seems that this part is only allowed to be submitted once.

Aug 2 2020, 11:43 AM · CI, MITK (v2021.02), Restricted Project
kislinsk added a comment to T25882: Rewrite dashboard script for CDash 2.6.

Pushed new branch hotfix/T25882-CDash-v2.6.

Aug 2 2020, 10:43 AM · CI, MITK (v2021.02), Restricted Project
kislinsk added a comment to T26854: Unattended Qt installation.

Here is the currently working script.

Aug 2 2020, 7:50 AM · CI, Restricted Project, MITK
kislinsk renamed CEST References from CEST references to CEST References.
Aug 2 2020, 7:37 AM
kislinsk edited the content of CEST User Manual.
Aug 2 2020, 7:35 AM · MITK
kislinsk reopened T25882: Rewrite dashboard script for CDash 2.6 as "Open".

I still cannot browse submission results. :/

Aug 2 2020, 7:31 AM · CI, MITK (v2021.02), Restricted Project

Aug 1 2020

kislinsk closed T25882: Rewrite dashboard script for CDash 2.6 as Resolved.
Aug 1 2020, 4:58 PM · CI, MITK (v2021.02), Restricted Project
kislinsk added a comment to T25882: Rewrite dashboard script for CDash 2.6.

Deleted branch hotfix/T25882-CDash-v2.6.

Aug 1 2020, 4:58 PM · CI, MITK (v2021.02), Restricted Project
kislinsk committed rMITK899caed2f76e: Merge branch 'hotfix/T25882-CDash-v2.6' into develop (authored by kislinsk).
Merge branch 'hotfix/T25882-CDash-v2.6' into develop
Aug 1 2020, 4:56 PM
kislinsk committed rMITKf0e722f6a65d: Merge branch 'hotfix/T25882-CDash-v2.6' (authored by kislinsk).
Merge branch 'hotfix/T25882-CDash-v2.6'
Aug 1 2020, 4:55 PM
kislinsk added a comment to T25882: Rewrite dashboard script for CDash 2.6.

Deleted branch bugfix/T25882-CDash-v2.6.

Aug 1 2020, 4:53 PM · CI, MITK (v2021.02), Restricted Project
kislinsk added a comment to T25882: Rewrite dashboard script for CDash 2.6.

Pushed new branch hotfix/T25882-CDash-v2.6.

Aug 1 2020, 4:52 PM · CI, MITK (v2021.02), Restricted Project
kislinsk added a comment to T25882: Rewrite dashboard script for CDash 2.6.

Pushed new branch bugfix/T25882-CDash-v2.6.

Aug 1 2020, 4:43 PM · CI, MITK (v2021.02), Restricted Project