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Sep 11 2020

kislinsk added a subtask for T27196: Rewrite packaging of MITK: T27717: Mac OS: MITK Workbench&Flowbench crashes immediately after start .
Sep 11 2020, 12:25 PM · MITK (v2024.06), Cleared
kislinsk moved T27701: Overhaul or remove PluginGenerator from Backlog to MITK Meeting on the Request for Discussion board.
Sep 11 2020, 12:20 PM · MITK, Next Milestone
kislinsk claimed T27701: Overhaul or remove PluginGenerator.
Sep 11 2020, 12:20 PM · MITK, Next Milestone
kislinsk added a comment to T27701: Overhaul or remove PluginGenerator.

Yes, let's deactivate them for now (again), and discuss it in the next MITK meeting.

Sep 11 2020, 12:20 PM · MITK, Next Milestone
kalali added a comment to T27713: [Segmentation] Disable "New" button when no image is selected.

Also, the checklist states "Er ist disabled"

Sep 11 2020, 12:03 PM · MITK (v2021.10), Request for Discussion
clueth added projects to T27717: Mac OS: MITK Workbench&Flowbench crashes immediately after start : MITK, Restricted Project.
Sep 11 2020, 12:02 PM · MITK (v2021.02)
kalali added a comment to T27506: Extend checklists for segmentation view.

What exactly? I copied the checklists to my local machine and I'm working on T27716: Extend "Checkliste Segmentierung – Manuelle Segmentierung / 2D Segmentierung".

Sep 11 2020, 11:48 AM · MITK (v2022.04), Cleared
kalali renamed T26989: [Checklist] GUI test data originates from different sources from [Checklist] GUI test data originates from different sources to [Checklist] GUI test data originates from different sources.
Sep 11 2020, 11:47 AM · MITK (v2021.10)
nolden added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

@jsolislemus Sorry for the long delay, I kind of missed your comment and related discussions happened in T27669

Sep 11 2020, 11:45 AM · MITK
wiesenfa added a comment to T27338: Report contains misleading information on missing values.

the first sentence refers to the fact that no missings have been found in the data set. would rephrasing to "0 missing cases entered in the data set have been found" help? the next sentence is about cases which have been inserted by the sanity check. Would adding "However, ..." in between help?
If you have any other suggestions, I would be happy to include them

Sep 11 2020, 11:42 AM · challengeR (v1.0)
clueth updated the task description for T27717: Mac OS: MITK Workbench&Flowbench crashes immediately after start .
Sep 11 2020, 11:37 AM · MITK (v2021.02)
kislinsk added a member for MIC: b030s.
Sep 11 2020, 11:23 AM
nolden added a comment to T27669: Dicom import issue with MITK binaries (package) and Ubuntu.

@schererj we just discussed this in the MITK meeting. Could you try something? It would be interesting to compare the outputs of

Sep 11 2020, 11:22 AM · Missing Info, DICOM, MITK
schererj created T27718: Miniapp for basic DICOM testing.
Sep 11 2020, 10:58 AM · MITK (v2023.12), Kaapana (internal)
clueth created T27717: Mac OS: MITK Workbench&Flowbench crashes immediately after start .
Sep 11 2020, 10:43 AM · MITK (v2021.02)
floca added a comment to T27506: Extend checklists for segmentation view.

Damn I have forgotten to copy the checklist to a reachable share. @kalali Is it already done now or obsolete?

Sep 11 2020, 10:33 AM · MITK (v2022.04), Cleared
kalali added a comment to T27506: Extend checklists for segmentation view.

All tools have to check for the following usage scenario:

  • All this with an image which time geometry does not start at 0 ms (e.g. MITK-Data/3D+t-ITKIO-TestData/LinearModel_4D_arbitrary_time_geometry.nrrd)
Sep 11 2020, 10:22 AM · MITK (v2022.04), Cleared
nolden added a project to T27701: Overhaul or remove PluginGenerator: Request for Discussion.

Since we have this task now I suggest to deactivate them "somewhere globally" and discuss later how to proceed. My guess would be it is quite some effort. Having tests for the generator, packging and the extension mechanism is very important I think, but I'm not sure what the current tests cover and if it's worth to fix.

Sep 11 2020, 10:15 AM · MITK, Next Milestone
kalali triaged T27716: Extend "Checkliste Segmentierung – Manuelle Segmentierung / 2D Segmentierung" as Normal priority.
Sep 11 2020, 10:10 AM · MITK (v2022.04), Cleared
kalali added a comment to T27506: Extend checklists for segmentation view.

I started with the checklists I from E130-Daten\Release\Checklisten\MITK Workbench Release.

Sep 11 2020, 10:07 AM · MITK (v2022.04), Cleared
kislinsk edited Description on Tassilo Wald.
Sep 11 2020, 9:51 AM
kislinsk edited Description on Tassilo Wald.
Sep 11 2020, 9:50 AM
kislinsk created Tassilo Wald.
Sep 11 2020, 9:29 AM
kislinsk created webChallengeR.
Sep 11 2020, 9:15 AM

Sep 10 2020

kislinsk added a project to T27263: Measurements and pointsets display no valuable information: MITK.
Sep 10 2020, 5:38 PM · MITK (v2022.04)
kislinsk added a project to T27339: Provide public MITK ModelFit installer on a regular basis: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27031: [Image statistics] Define identifier for statistics and histogram: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27270: Planar figures are inconsistently bound by reference image: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27258: [Image statistics] Deprecate QmitkImageStatisticsCalculationJob : MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27269: PlanarCircle shrinks in size when moved towards image boundaries: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27495: [Registration] Evaluator/Manipulator wipe mode is lacking one click behind: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T27451: [Registration] Mapper: Changed default level/window after identity mapping : MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T26288: MRI Perfusion view should only generate concentration images once: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T26098: [ImageStatistics] Histogram Statistics need to be tested: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Restricted Project
kislinsk added a project to T25192: Enable DICOM SEG conversion for nrrd segmentations: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
kislinsk added a project to T26951: DICOM SEG - DicomSegIO should just use properties of the passed segmentation object: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T26953: DICOM SEG - Cannot rewrite segmentations as DICOM SEG: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T26950: Add rule class for DICOM Seg relations to source image: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T26952: Implement helper to correct (DICOM conformal) set the properties of a segmentation (DICOM SEG): MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27032: [Image statistics] Discuss Histogram with respect to the new multi node selection: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27284: [Image Statistic] Histogram is only supported with one image and <=1 ROI: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27271: [Image Statistics] Double clicking to isolate one graph only works on already enabled graphs: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27285: [Image Statistics] QmitkChart widget should support ID or allow control over labels: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27306: [statistics] Errors caused in MitkChart when using histogram and intensity profile widgets.: MITK.
Sep 10 2020, 5:38 PM · MITK (v2023.12)
kislinsk added a project to T27350: Refactoring of T1 map calculation/selection for perfusion and CEST: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
kislinsk added a project to T27357: Check/Update DICOMTags of interest: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared, HiGHmed
kislinsk added a project to T27664: Check conversion from signal to concentration for a turboFLASH sequence: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T27666: Concentration curve converter view- missing echo time unit: MITK.
Sep 10 2020, 5:38 PM · MITK (v2022.04), Cleared
kislinsk added a project to T27654: Refactor concentration curve converter view to use new selection concept: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T27667: Concentration curve converter view- errors in formula for T2-weighted signal conversion: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T27671: Concentration Curve Converter: Crash due to baseline avergaing: MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06), Cleared
kislinsk added a project to T27432: Error loading DCE-MRI DICOM image: MITK.
Sep 10 2020, 5:38 PM · MITK, DICOM, Cleared
kislinsk added a project to T27655: [statistics] Logic of DataGeneratorBase blocks the UI thread : MITK.
Sep 10 2020, 5:38 PM · MITK (v2024.06)
eisenman moved T27715: Specify minimum required versions of dependencies from In Progress to Done on the challengeR (v1.0) board.
Sep 10 2020, 4:50 PM · challengeR (v1.0)
eisenman committed rCHALLENGERc112251b10d2: Merge branch 'feature/T27715-MinimumDependencyVersions' into develop (authored by eisenman).
Merge branch 'feature/T27715-MinimumDependencyVersions' into develop
Sep 10 2020, 4:50 PM
eisenman committed rCHALLENGERd4b4cf639b80: Specify minimum versions of dependencies (authored by eisenman).
Specify minimum versions of dependencies
Sep 10 2020, 4:48 PM
floca edited projects for T27339: Provide public MITK ModelFit installer on a regular basis, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:35 PM · MITK (v2024.06)
floca edited projects for T26288: MRI Perfusion view should only generate concentration images once, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:35 PM · MITK (v2024.06), Cleared
floca edited projects for T27350: Refactoring of T1 map calculation/selection for perfusion and CEST, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:35 PM · MITK (v2024.06)
floca edited projects for T27654: Refactor concentration curve converter view to use new selection concept, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:34 PM · MITK (v2024.06), Cleared
floca edited projects for T27664: Check conversion from signal to concentration for a turboFLASH sequence, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:34 PM · MITK (v2024.06), Cleared
floca edited projects for T27666: Concentration curve converter view- missing echo time unit, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:34 PM · MITK (v2022.04), Cleared
floca edited projects for T27667: Concentration curve converter view- errors in formula for T2-weighted signal conversion, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:34 PM · MITK (v2024.06), Cleared
floca edited projects for T27671: Concentration Curve Converter: Crash due to baseline avergaing, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:34 PM · MITK (v2024.06), Cleared
floca edited projects for T27432: Error loading DCE-MRI DICOM image, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:33 PM · MITK, DICOM, Cleared
floca edited projects for T27451: [Registration] Mapper: Changed default level/window after identity mapping , added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:33 PM · MITK (v2024.06), Cleared
floca edited projects for T27495: [Registration] Evaluator/Manipulator wipe mode is lacking one click behind, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:32 PM · MITK (v2024.06), Cleared
floca edited projects for T25192: Enable DICOM SEG conversion for nrrd segmentations, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:28 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
floca edited projects for T26950: Add rule class for DICOM Seg relations to source image, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:28 PM · MITK (v2024.06), Cleared
floca edited projects for T26951: DICOM SEG - DicomSegIO should just use properties of the passed segmentation object, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:28 PM · MITK (v2024.06)
floca edited projects for T26952: Implement helper to correct (DICOM conformal) set the properties of a segmentation (DICOM SEG), added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:27 PM · MITK (v2024.06)
floca edited projects for T26953: DICOM SEG - Cannot rewrite segmentations as DICOM SEG, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:27 PM · MITK (v2024.06), Cleared
floca edited projects for T27357: Check/Update DICOMTags of interest, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:27 PM · MITK (v2024.06), Cleared, HiGHmed
eisenman renamed T27715: Specify minimum required versions of dependencies from Specify minimum required versions for dependencies to Specify minimum required versions of dependencies.
Sep 10 2020, 4:27 PM · challengeR (v1.0)
floca edited projects for T27263: Measurements and pointsets display no valuable information, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:27 PM · MITK (v2022.04)
eisenman added a comment to T27715: Specify minimum required versions of dependencies.

The minimum required versions were identified from the set of packages the developers (@wiesenfa , @reinkea , @aguilera , @eisenman ) are currently using.

Sep 10 2020, 4:26 PM · challengeR (v1.0)
floca edited projects for T27269: PlanarCircle shrinks in size when moved towards image boundaries, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:26 PM · MITK (v2024.06)
floca edited projects for T27270: Planar figures are inconsistently bound by reference image, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:26 PM · MITK (v2024.06)
floca edited projects for T27258: [Image statistics] Deprecate QmitkImageStatisticsCalculationJob , added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:26 PM · MITK (v2024.06)
floca edited projects for T27031: [Image statistics] Define identifier for statistics and histogram, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:26 PM · MITK (v2024.06)
floca edited projects for T26098: [ImageStatistics] Histogram Statistics need to be tested, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:26 PM · MITK (v2024.06), Restricted Project
floca edited projects for T27271: [Image Statistics] Double clicking to isolate one graph only works on already enabled graphs, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:25 PM · MITK (v2024.06)
floca edited projects for T27285: [Image Statistics] QmitkChart widget should support ID or allow control over labels, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:25 PM · MITK (v2024.06)
floca removed a project from T27306: [statistics] Errors caused in MitkChart when using histogram and intensity profile widgets.: MITK (v2021.02).
Sep 10 2020, 4:25 PM · MITK (v2023.12)
floca added a project to T27306: [statistics] Errors caused in MitkChart when using histogram and intensity profile widgets.: Next Milestone.
Sep 10 2020, 4:25 PM · MITK (v2023.12)
floca edited projects for T27284: [Image Statistic] Histogram is only supported with one image and <=1 ROI, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:25 PM · MITK (v2024.06)
floca edited projects for T27032: [Image statistics] Discuss Histogram with respect to the new multi node selection, added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:25 PM · MITK (v2024.06)
floca edited projects for T27655: [statistics] Logic of DataGeneratorBase blocks the UI thread , added: Next Milestone; removed MITK (v2021.02).
Sep 10 2020, 4:24 PM · MITK (v2024.06)
eisenman moved T27715: Specify minimum required versions of dependencies from Backlog to In Progress on the challengeR (v1.0) board.
Sep 10 2020, 4:22 PM · challengeR (v1.0)
eisenman created T27715: Specify minimum required versions of dependencies.
Sep 10 2020, 4:22 PM · challengeR (v1.0)
kislinsk added a comment to T22064: DICOM tags with hex-value can not be correctly converted.

Deleted branch T22064-Fix-test-for-new-uppercase-DICOM-tags.

Sep 10 2020, 2:29 PM · MITK (2016-11)
kislinsk added a comment to T19933: The outline of a segmentation cannot be turned off anymore.

Deleted branch T19933-Turn-off-outline-of-segmentation-integration.

Sep 10 2020, 2:29 PM · MITK (2016-11), Restricted Project
kislinsk added a comment to T22064: DICOM tags with hex-value can not be correctly converted.

Deleted branch T22064-Convert-DICOM-hex-tags.

Sep 10 2020, 2:29 PM · MITK (2016-11)
kislinsk added a comment to T19933: The outline of a segmentation cannot be turned off anymore.

Deleted branch T19933-Turn-off-outline-of-segmentation.

Sep 10 2020, 2:29 PM · MITK (2016-11), Restricted Project
kislinsk added a comment to T19933: The outline of a segmentation cannot be turned off anymore.

Deleted branch T19933-Outline-of-segmentation-fix-rebase.

Sep 10 2020, 2:29 PM · MITK (2016-11), Restricted Project
kislinsk added a comment to T19933: The outline of a segmentation cannot be turned off anymore.

Deleted branch T19933-Outline-of-segmentation-fix.

Sep 10 2020, 2:29 PM · MITK (2016-11), Restricted Project
kalali moved T23811: PatientViewPlugin ++ from Backlog to MITK Meeting on the Request for Discussion board.
Sep 10 2020, 1:52 PM · Request for Discussion, MITK
kalali added a project to T23811: PatientViewPlugin ++: Request for Discussion.
Sep 10 2020, 1:52 PM · Request for Discussion, MITK
kislinsk renamed T27713: [Segmentation] Disable "New" button when no image is selected from Disable "New" button when no image is selected to [Segmentation] Disable "New" button when no image is selected.
Sep 10 2020, 1:34 PM · MITK (v2021.10), Request for Discussion
eisenman added a comment to T27338: Report contains misleading information on missing values.

I checked the report and I think the handling of missings is not clear: First saying no observations are missing, followed by algorithm performances are missing. The value of the replacement should not appear in the table.

Sep 10 2020, 1:32 PM · challengeR (v1.0)