Page MenuHomePhabricator
Feed All Stories

Aug 4 2019

pfjaeger <p.jaeger@dkfz.de> committed rMDTPUBLIC2fb48263bd08: fixed typo in mrcnn.py (authored by pfjaeger <p.jaeger@dkfz.de>).
fixed typo in mrcnn.py
Aug 4 2019, 3:22 AM

Aug 2 2019

eisenman committed rMITK77b6683f13ea: Merge branch 'T26277-PhantomBasedUSCalibration-Integration' (authored by eisenman).
Merge branch 'T26277-PhantomBasedUSCalibration-Integration'
Aug 2 2019, 7:18 PM
kislinsk added a comment to T26559: Improve Python 3 integration.

Bug(s) in CTK:

Aug 2 2019, 6:44 PM · MITK Diffusion, Noteworthy, MITK
kausch committed rMITK27114c3df475: Merge branch 'T19683-ShowOnlySelectedNodesCrosshairVisibility-RandomAccess' (authored by kausch).
Merge branch 'T19683-ShowOnlySelectedNodesCrosshairVisibility-RandomAccess'
Aug 2 2019, 6:22 PM
kausch added a comment to T19683: "Show only selected node" changes the visibility of crosshair.

If you ask for all the nodes from data storage then you get also child nodes in random order. In the previous implementation, visibility of all child nodes of widgets are set to True when the widgets node is reached. Nonetheless, child nodes visibility were afterwards set to False in the outer loop.
Now the loop is only done on nodes in the first level that contain data, therefore crosshair nodes stay always visible.

Aug 2 2019, 6:08 PM · Bugzilla, Pull Request, MITK
kalali added a comment to T19683: "Show only selected node" changes the visibility of crosshair.

Could you elaborate on this? I don't get it: aren't we processing each single data node inside the data storage?

Aug 2 2019, 5:46 PM · Bugzilla, Pull Request, MITK
kausch reopened T19683: "Show only selected node" changes the visibility of crosshair as "Open".

In Ubuntu 18.04 data storage is accessed in random order therefore the visibility of crosshair was set randomly. Fixed in branch: T19683-ShowOnlySelectedNodesCrosshairVisibility-RandomAccess.

Aug 2 2019, 5:41 PM · Bugzilla, Pull Request, MITK
kausch added a comment to T19683: "Show only selected node" changes the visibility of crosshair.

Pushed new branch T19683-ShowOnlySelectedNodesCrosshairVisibility-RandomAccess.

Aug 2 2019, 5:37 PM · Bugzilla, Pull Request, MITK
kislinsk triaged T26559: Improve Python 3 integration as Normal priority.
Aug 2 2019, 5:34 PM · MITK Diffusion, Noteworthy, MITK
kislinsk closed T26556: Python 3.7 does not work on macOS as Resolved.
Aug 2 2019, 5:04 PM · MITK
floca added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

Hm, ok. Then the log output is somehow inconsistent, with what is loaded into the workbench.
@kislinsk How do one enforces the more detailed log? The logging console is capable to show more information then given in the attached log.

Aug 2 2019, 4:40 PM · MITK
kislinsk added a comment to T26546: Upgrade Boost from version 1.68 to version 1.70.

As the download step is actually a git clone step the patch command is executed everytime instead of only. The patch command will return a non-zero exit code for already applied patches which probably causes the error.

Aug 2 2019, 4:29 PM · MITK
kislinsk committed rMITKc83a7d301fe0: Merge branch 'T26556-Python3.6-macOS' (authored by kislinsk).
Merge branch 'T26556-Python3.6-macOS'
Aug 2 2019, 4:28 PM
kislinsk committed rMITK81abbdb8d823: Merge branch 'T26556-Python3.6-macOS' (authored by kislinsk).
Merge branch 'T26556-Python3.6-macOS'
Aug 2 2019, 4:16 PM
kislinsk added a comment to T26556: Python 3.7 does not work on macOS.

Pushed new branch T26556-Python3.6-macOS.

Aug 2 2019, 4:14 PM · MITK
kislinsk triaged T26556: Python 3.7 does not work on macOS as High priority.
Aug 2 2019, 3:58 PM · MITK
eisenman added a comment to T26277: Add phantom-based calibration to USCalibration plugin.

Pushed new branch T26277-PhantomBasedUSCalibration-Integration.

Aug 2 2019, 3:18 PM · MITK, IGT
kalali triaged T26555: [mxn multi widget] Provide different default layouts as Normal priority.
Aug 2 2019, 3:07 PM · MITK
kislinsk committed rMITK6e131c6016c0: Merge branch 'T26544-GuardTestSettings' (authored by kislinsk).
Merge branch 'T26544-GuardTestSettings'
Aug 2 2019, 1:50 PM
metzger added a member for Kaapana (internal): maerz.
Aug 2 2019, 1:20 PM
metzger removed a member for Kaapana (internal): skohl.
Aug 2 2019, 1:20 PM
kislinsk moved T26543: Enum for AXIAL, SAGITTAL, CORONAL 3D/ORIGINAL/NONE is provided at many different locations from MITK Meeting to Backlog on the Request for Discussion board.
Aug 2 2019, 11:26 AM · Breaking Change, Noteworthy, MITK
kislinsk triaged T26543: Enum for AXIAL, SAGITTAL, CORONAL 3D/ORIGINAL/NONE is provided at many different locations as Low priority.

This is actually a huge topic with many implications. So we will defer the discussion.

Aug 2 2019, 11:26 AM · Breaking Change, Noteworthy, MITK
neher closed T26554: Update openmp dependency as Resolved.
Aug 2 2019, 11:00 AM · MITK Diffusion
kislinsk reopened T26546: Upgrade Boost from version 1.68 to version 1.70 as "Open".

cpprestsdk compiles fine but when triggered from superbuild the Debug configuration fails with an unspecified error.

Aug 2 2019, 10:10 AM · MITK
kislinsk committed rMITK8dd32c49927f: Merge branch 'T26544-GuardTestSettings' (authored by kislinsk).
Merge branch 'T26544-GuardTestSettings'
Aug 2 2019, 10:09 AM
neher committed rMITKDIFF525cf5197b7f: Merge branch 'T26554-OpenMP' (authored by neher).
Merge branch 'T26554-OpenMP'
Aug 2 2019, 9:44 AM
neher committed rMITKDIFF7fe2d0b37167: Added new dependency format (authored by neher).
Added new dependency format
Aug 2 2019, 9:43 AM
neher added a comment to T26554: Update openmp dependency.

Pushed new branch T26554-OpenMP.

Aug 2 2019, 9:43 AM · MITK Diffusion
neher triaged T26554: Update openmp dependency as Normal priority.
Aug 2 2019, 9:42 AM · MITK Diffusion
onogur added a member for BMC: hempe.
Aug 2 2019, 9:36 AM

Aug 1 2019

kislinsk closed T26546: Upgrade Boost from version 1.68 to version 1.70 as Resolved.
Aug 1 2019, 3:07 PM · MITK
kislinsk committed rMITK98f91734cf08: Merge branch 'T26546-UpgradeBoostToVersion1.70' (authored by kislinsk).
Merge branch 'T26546-UpgradeBoostToVersion1.70'
Aug 1 2019, 3:05 PM
kislinsk added a comment to T26546: Upgrade Boost from version 1.68 to version 1.70.

Great, now websocketpp is incompatible to Boost 1.70.

Aug 1 2019, 2:31 PM · MITK
kislinsk committed rMITK778a6d195f47: Merge branch 'T26546-UpgradeBoostToVersion1.70' (authored by kislinsk).
Merge branch 'T26546-UpgradeBoostToVersion1.70'
Aug 1 2019, 2:06 PM
kislinsk added a comment to T26546: Upgrade Boost from version 1.68 to version 1.70.

Pushed new branch T26546-UpgradeBoostToVersion1.70.

Aug 1 2019, 2:05 PM · MITK
kalali added a comment to T26543: Enum for AXIAL, SAGITTAL, CORONAL 3D/ORIGINAL/NONE is provided at many different locations.

This will further allow to remove the string query (e.g. "axial") for render windows but allow a type-based request.

Aug 1 2019, 2:04 PM · Breaking Change, Noteworthy, MITK
kalali moved T26543: Enum for AXIAL, SAGITTAL, CORONAL 3D/ORIGINAL/NONE is provided at many different locations from Backlog to MITK Meeting on the Request for Discussion board.
Aug 1 2019, 2:03 PM · Breaking Change, Noteworthy, MITK
kalali triaged T26547: Clarify difference between QmitkPointListViewWidget and QmitkPointListView as Low priority.
Aug 1 2019, 2:02 PM · MITK (v2022.10)
kislinsk triaged T26546: Upgrade Boost from version 1.68 to version 1.70 as Normal priority.
Aug 1 2019, 1:59 PM · MITK
kalali triaged T26545: [Multi widget] Make classes work with QmitkAbstractMultiWidget(Editor) as Normal priority.
Aug 1 2019, 1:49 PM · MITK (v2022.10)
jsolislemus added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

Only one file in the stack was chosen on both cases.

Aug 1 2019, 1:41 PM · MITK
floca added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

(1) Using the Open File button -> Selected the (autoselect) -> NOT clicking on "apply the same to the remaining files" (file MitkWorkbench_MRIreadeAutoselect.log and looking as in the screenshot attached). The images were loaded individually, and not as a single dicom.

Regarding this workflow: I have another question. How many files did you select in the dialoge? One file of the stack as selection would be sufficient.

Aug 1 2019, 11:40 AM · MITK
kalali added a comment to T26543: Enum for AXIAL, SAGITTAL, CORONAL 3D/ORIGINAL/NONE is provided at many different locations.

mitkBaseRenderer.h already contains the enum for Standard2D and Standard3D, which is needed if one wants to switch between 2D and 3D view.
The file is part of MITK Core so that could be a good location to put the view direction enum.

Aug 1 2019, 11:23 AM · Breaking Change, Noteworthy, MITK
kislinsk closed T26544: set_property given TEST names that do not exist: mitkSplineVtkMapper3DTest as Resolved.

Also fixed a few other compiler errors on macOS and improved handling of the OpenMP dependency.

Aug 1 2019, 11:16 AM · MITK
kislinsk committed rMITKe7f54ab88969: Merge branch 'T26544-GuardTestSettings' (authored by kislinsk).
Merge branch 'T26544-GuardTestSettings'
Aug 1 2019, 11:10 AM
kislinsk committed rMITK00f731493d72: Merge branch 'T26544-GuardTestSettings' (authored by kislinsk).
Merge branch 'T26544-GuardTestSettings'
Aug 1 2019, 10:13 AM
kislinsk committed rMITK88ec7d2b195d: Merge branch 'T26544-GuardTestSettings' (authored by kislinsk).
Merge branch 'T26544-GuardTestSettings'
Aug 1 2019, 10:06 AM
kislinsk committed rMITK144ebddd8e4b: Merge branch 'T26544-GuardTestSettings' (authored by kislinsk).
Merge branch 'T26544-GuardTestSettings'
Aug 1 2019, 9:43 AM
kalali triaged T26542: Remove functions from StdMultiWidget(Editor) as Low priority.
Aug 1 2019, 9:37 AM · MITK
kislinsk committed rMITKcf76fb44f7a0: Merge branch 'T26544-GuardTestSettings' (authored by kislinsk).
Merge branch 'T26544-GuardTestSettings'
Aug 1 2019, 9:09 AM
kislinsk added a comment to T26544: set_property given TEST names that do not exist: mitkSplineVtkMapper3DTest.

Pushed new branch T26544-GuardTestSettings.

Aug 1 2019, 9:07 AM · MITK
kislinsk triaged T26544: set_property given TEST names that do not exist: mitkSplineVtkMapper3DTest as High priority.
Aug 1 2019, 9:05 AM · MITK
kislinsk added a comment to T26542: Remove functions from StdMultiWidget(Editor).

Please set a priority other than Needs Triage for tasks as it clutters our triage queue otherwise.

Aug 1 2019, 9:03 AM · MITK

Jul 31 2019

kalali created T26543: Enum for AXIAL, SAGITTAL, CORONAL 3D/ORIGINAL/NONE is provided at many different locations.
Jul 31 2019, 7:14 PM · Breaking Change, Noteworthy, MITK
kalali created T26542: Remove functions from StdMultiWidget(Editor).
Jul 31 2019, 6:22 PM · MITK
eisenman closed T26540: Warning as error in ultrasoundtrackingnavigation as Resolved.
Jul 31 2019, 5:43 PM · IGT, MITK
eisenman committed rMITK26a786a00a28: Merge branch 'T26540-FixWarningAsErrorInUltrasoundTrackingNavigation' (authored by eisenman).
Merge branch 'T26540-FixWarningAsErrorInUltrasoundTrackingNavigation'
Jul 31 2019, 5:38 PM
eisenman updated subscribers of T26540: Warning as error in ultrasoundtrackingnavigation.
Jul 31 2019, 5:35 PM · IGT, MITK
eisenman added a comment to T26540: Warning as error in ultrasoundtrackingnavigation.

Pushed new branch T26540-FixWarningAsErrorInUltrasoundTrackingNavigation.

Jul 31 2019, 5:32 PM · IGT, MITK
eisenman moved T26540: Warning as error in ultrasoundtrackingnavigation from Backlog to In Progress on the IGT board.
Jul 31 2019, 3:47 PM · IGT, MITK
jsolislemus added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

Hello, sure. Please let me know if you need clarification, I am writing this with some haste, so I might not be as thorough or clear in my explanations.

Jul 31 2019, 3:45 PM · MITK
floca added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

@jsolislemus Thanks for the info. If I understood it correctly also the official installer shows this problem. Could you please do me a favor and check with the official installer if you have the same loading problem, if you do not use the DICOM browser, but instead the normal file open dialog or dragNdrop. With this information we can narrow it down a bit more.
Thanks.

Jul 31 2019, 3:27 PM · MITK
eisenman added a project to T26540: Warning as error in ultrasoundtrackingnavigation: IGT.
Jul 31 2019, 2:23 PM · IGT, MITK

Query Overheated

This query took too long, so only some results are shown. Learn More