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Dec 13 2019
Dec 13 2019
Dec 12 2019
Dec 12 2019
Fix swapping to temporary
kislinsk committed rMITKcfdaacfc3473: Merge branch 'T26921-FixCompileErrors' (authored by kislinsk).
Merge branch 'T26921-FixCompileErrors'
Fix swapping to temporary
Use std::queue's own swap function
kislinsk committed rMITKe178c6b0e73c: Merge branch 'T26921-FixCompileErrors' (authored by kislinsk).
Merge branch 'T26921-FixCompileErrors'
Use std::queue's own swap function
kislinsk closed T26921: Latest Visual Studio 16.4 2019 reveals some bugs that result in compile errors as Resolved.
Back-ported/cherry-picked fixes also to releases/2018-04.
Fix incomplete code comment
kislinsk committed rMITK453ed5f95880: Fix discarded return value of function with nodiscard attribute (authored by kislinsk).
Fix discarded return value of function with nodiscard attribute
kislinsk committed rMITKf4e2436ce065: Fix wrong use of .empty() to clear containers (authored by kislinsk).
Fix wrong use of .empty() to clear containers
kislinsk committed rMITK9b78e0bf440e: Merge branch 'T26921-FixCompileErrors' (authored by kislinsk).
Merge branch 'T26921-FixCompileErrors'
Fix incomplete code comment
kislinsk committed rMITK1307f9b641db: Fix discarded return value of function with nodiscard attribute (authored by kislinsk).
Fix discarded return value of function with nodiscard attribute
kislinsk committed rMITKa0585a02a272: Fix wrong use of .empty() to clear containers (authored by kislinsk).
Fix wrong use of .empty() to clear containers
kislinsk added a comment to T26921: Latest Visual Studio 16.4 2019 reveals some bugs that result in compile errors.
Pushed new branch T26921-FixCompileErrors.
kislinsk triaged T26921: Latest Visual Studio 16.4 2019 reveals some bugs that result in compile errors as High priority.
Dec 11 2019
Dec 11 2019
• ramien committed rMDTPUBLICb72bc879b5dd: smooth in dice loss, no double logging consec folds (authored by • ramien).
smooth in dice loss, no double logging consec folds
• ramien committed rREGRCNNc9ddf41bc42d: file logger separate files per fold (authored by • ramien).
file logger separate files per fold
• ramien committed rREGRCNN56fb0d3e86d3: file logger separate files per fold (authored by • ramien).
file logger separate files per fold
• ramien committed rREGRCNNd3df3ad374b8: file logger separate files per fold (authored by • ramien).
file logger separate files per fold
smooth also in dice loss
python3.6 in readme
use batchgenerators 19.3
Merge branch 'torch1x'
exec logger fix
issue #91
re-added assets
realigning file tracking
• ramien committed rMDTPUBLIC3ef7d8974aa0: fix retina unet norm in final conv, toy_exp class_spec_seg_flag (authored by • ramien).
fix retina unet norm in final conv, toy_exp class_spec_seg_flag
• ramien committed rMDTPUBLIC7f1b5bf64963: consecutive fold-iterations fix, --dev (authored by • ramien).
consecutive fold-iterations fix, --dev
premerge
There seems to be a problem with the -DBUILD_TESTING:BOOL=OFF option.
If you use CMake-GUI the variable is ON per default when first configured and is then set to OFF (if you choose so) and re-configured.
Dec 10 2019
Dec 10 2019
readme and make exp parent dirs
readme and make exp parent dirs
• ramien committed rREGRCNN0f62b2f242ae: public branch update to torch 1.3, python 3.7 (authored by • ramien).
public branch update to torch 1.3, python 3.7
• ramien committed rREGRCNNb5b8b66f5d6a: torch 1.3.1 and python 3.7 finalization (authored by • ramien).
torch 1.3.1 and python 3.7 finalization
Dec 9 2019
Dec 9 2019
• ramien committed rREGRCNNc3b975bf8593: torch 1.3.1 and python 3.7 finalization (authored by • ramien).
torch 1.3.1 and python 3.7 finalization
• ramien committed rREGRCNN2b8f692e1e24: torch 1.3.1 and python 3.7 finalization (authored by • ramien).
torch 1.3.1 and python 3.7 finalization
re-added assets
max patients in defconfigs
A two step build also works:
requirements fix
rm test error
readme, unittests
pre python reinstall
• ramien committed rREGRCNN5083824c597c: fixes, nms behaviour like pytorch (no +1), unittests (authored by • ramien).
fixes, nms behaviour like pytorch (no +1), unittests
• ramien committed rREGRCNNa46f796a0998: unresolved no program exit if no sysmetrics logging (authored by • ramien).
unresolved no program exit if no sysmetrics logging
hangup present
tracking exit hangup
autom exts install
tracking exit hangup
tracking exit hangup
Dec 6 2019
Dec 6 2019
In T25192#164895, @metzger wrote:NOT READY FOR MASTER!
Already add serialization of properties marked as persistent to the multilabel nrrd writer. Also copied the code from image nrrd file reader to get all properties while reading a nrrd image (not nice but works). But testing was only for one use case. So looking for side effects before merging this commit (6f1b022e7b8d) into master.
rMITK060c74e0e13601d6ccd7653122ce65e2e7fae181 is a proposed fix for the problem.
@neher Do you see any problems?
floca committed rMITK060c74e0e136: Patched problem due to T26903 in order to allow storing of DICOM seg again. (authored by floca).
Patched problem due to T26903 in order to allow storing of DICOM seg again.
Corrected command line argument name
floca triaged T26903: DICOM Seg writing is broken due to changes in DICOMSEGIOMimeType as Unbreak Now! priority.
copyright in readme
franza committed rMITK9f539789b364: second tool is now the marker for CT registration as the first tool is the… (authored by franza).
second tool is now the marker for CT registration as the first tool is the…
cleaned up ui for better demo
franza committed rMITK84a92de3d649: added feature to visualize different surfaces (authored by franza).
added feature to visualize different surfaces
franza committed rMITK417c638dc862: Added console output of different transforms (authored by franza).
Added console output of different transforms
I have managed to compile now just using cmake cli, when doing the following:
Fixes broken ExtractSliceFilter
floca added a comment to T26167: ExtractSliceFilter handles 3D+t images inefficiently and inconsequently.
Pushed new branch T26167-Fix_broken_test.
Using CMake command line I get this error with my local windows, if I build it the second time.
kalali moved T26849: Remove polling loop from continuous CDash scripts from Backlog to Done on the CI board.
Unify license and copyright headers
I give up, it makes no sense to put much time into this until Github clearly communicates the heuristic to detect the license.
floca updated subscribers of T26167: ExtractSliceFilter handles 3D+t images inefficiently and inconsequently.
@kompan It is now in the master. ;)
floca committed rMITK1f6747197e81: Fixed T26167. ExtractSliceFilter does not clone unnecessarily the input… (authored by floca).
Fixed T26167. ExtractSliceFilter does not clone unnecessarily the input…
Fixed review remarks
Merge branch 'T26902-Copyright'
Remove division
Pushed new branch T26902-Copyright.
kislinsk committed rMITK56c0ba1005be: Merge branch 'T26893-GitHubCompatibleLicenseFile' (authored by kislinsk).
Merge branch 'T26893-GitHubCompatibleLicenseFile'
kislinsk committed rMITKa724ab165f2e: Move COPYRIGHT_HEADER to Templates/copyright_header.txt (authored by kislinsk).
Move COPYRIGHT_HEADER to Templates/copyright_header.txt
Merge branch 'T26896-TractSeg'
Flipping axes correctly
Adjust resource location
Pushed new branch T26896-TractSeg.
kislinsk committed rMITKb1ef2d248b65: Merge branch 'T26893-GitHubCompatibleLicenseFile' (authored by kislinsk).
Merge branch 'T26893-GitHubCompatibleLicenseFile'