Hi and thank you for the comprehensive report. I noticed you use GCC. We support Apple LLVM (Clang) on macOS Mojave, Catalina, and Big Sur. See https://docs.mitk.org/nightly/SupportedPlatformsPage.html for support level details regarding tier 1 and tier 2. Our continuous and nightly build reports can be found here: https://cdash.mitk.org/index.php?project=MITK.

Oct 14 2021, 2:11 PM · MITK

kislinsk added a revision to T28737: Remove last remains of .pic support: Unknown Object (Differential Revision).

Oct 14 2021, 1:49 PM · Breaking Change, MITK (v2021.10)

kislinsk added a project to T28737: Remove last remains of .pic support: Breaking Change.

Oct 14 2021, 1:42 PM · Breaking Change, MITK (v2021.10)

kislinsk renamed T28737: Remove last remains of .pic support from Please enter a meaningful title to Remove last remains of .pic support.

Oct 14 2021, 1:41 PM · Breaking Change, MITK (v2021.10)

kislinsk added a comment to T28737: Remove last remains of .pic support.

Pushed new branch to rMITK MITK: bugfix/T28737-RemovePicSupport.

Oct 14 2021, 1:39 PM · Breaking Change, MITK (v2021.10)

patmjen created T28738: MITK does not build on Mac OS 11.6.

Oct 14 2021, 1:34 PM · MITK

kislinsk updated the task description for T28737: Remove last remains of .pic support.

Oct 14 2021, 1:31 PM · Breaking Change, MITK (v2021.10)

kislinsk added a subtask for T28737: Remove last remains of .pic support: T13958: Replace all *.pic and *.pic.gz files in MITK by *.nrrd.

Oct 14 2021, 1:30 PM · Breaking Change, MITK (v2021.10)

kislinsk added a parent task for T13958: Replace all *.pic and *.pic.gz files in MITK by *.nrrd: T28737: Remove last remains of .pic support.

Oct 14 2021, 1:30 PM · Auto-closed, Bugzilla, MITK

kislinsk triaged T28737: Remove last remains of .pic support as Normal priority.

Oct 14 2021, 1:30 PM · Breaking Change, MITK (v2021.10)

kislinsk committed rMD74b6ce88ea93: Add nrrd replacements for pic files (authored by kislinsk).

Add nrrd replacements for pic files

Oct 14 2021, 1:21 PM

isensee added a comment to T28493: Multilabel color map colors are not very nice.

The labels in my example are consecutive integers. And even if they weren't the color mapping should skip unused integer values. Use equivalent of np.unique(segmentation) to determine used labels and set the map accordingly.

Oct 14 2021, 12:41 PM · Checklist, Request for Discussion, MITK (v2022.04)

isensee added a comment to T28521: multilabel segmentation add switch to disable contour.

see T28736, does not really work for me

Oct 14 2021, 12:33 PM · MITK (v2021.10)

isensee updated the task description for T28736: Preferences for segmentation '2D display' are not properly utilized.

Oct 14 2021, 12:33 PM · MITK (v2022.04)

isensee created T28736: Preferences for segmentation '2D display' are not properly utilized.

Oct 14 2021, 12:32 PM · MITK (v2022.04)

isensee added a comment to T28675: Boolean Operations in Segmentation utilities are slow.

Unfortunately still slow. Just checked with 2021-10-01 shapshot on Ubuntu 18.04 (same system as tests above).
13.6s for intersection
14s for difference
didn't bother clocking union

Oct 14 2021, 12:23 PM · MITK (v2024.06), Request for Discussion

kalali added a comment to T28732: [Segmentation] 3d region growing does not work with low seed point values.

We actually talked about the priority and I explicitly said to set it to "Unbreak Now" because it HAS to be fixed for the upcoming release. What are your thoughts?

Oct 14 2021, 12:16 PM · MITK (v2021.10)

floca reopened T24795: ModelFit visualization bug? as "Open".

Oct 14 2021, 12:06 PM · Auto-closed, MITK, Restricted Project

floca added a comment to T28089: [CEST] Error loading custom data due to alleged spacing of 0.

If the issue is still relevant and the missing information is provided, we can revive the task.

Oct 14 2021, 12:00 PM · Auto-closed, Missing Info, Restricted Project, MITK

floca reopened T27570: US DICOM images are read as 3D volume as "Open".

Oct 14 2021, 11:57 AM · Auto-closed, Missing Info, Restricted Project, MITK

floca reopened T27570: US DICOM images are read as 3D volume, a subtask of T27554: Handling of 2D and 2D+t sonographic (US) images, as Open.

Oct 14 2021, 11:57 AM · Restricted Project, MITK

kislinsk reopened T13958: Replace all *.pic and *.pic.gz files in MITK by *.nrrd as "Open".

I am currently removing the last remains of ipPic from MITK (not yet as a dependency of ipFunc, though), and will also remove or convert the last .pic and .pic.gz files from MITK-Data

Oct 14 2021, 11:53 AM · Auto-closed, Bugzilla, MITK

floca reopened T26151: ImageGenerator::GenerateFromReference causes HEAP CORRUPTION as "Open".

Oct 14 2021, 11:53 AM · Auto-closed, Restricted Project, MITK

floca reopened T26323: [MitkChart] add feature to highlight/colorize point as "Open".

Oct 14 2021, 11:51 AM · Auto-closed, MITK

floca reopened T26366: [ModelFitInspector] Fixed scaling doesn't work yet as "Open".

Oct 14 2021, 11:50 AM · Restricted Project, Restricted Project, MITK

floca reopened T26366: [ModelFitInspector] Fixed scaling doesn't work yet, a subtask of T25832: Migrate ModelFit inspector plugin to MitkChart, as Open.

Oct 14 2021, 11:50 AM · Restricted Project, Restricted Project, MITK

floca reopened T26367: [ModelFitInspector] Remove bookmark doesn't work as "Open".

Oct 14 2021, 11:50 AM · Restricted Project, Restricted Project, MITK

floca reopened T26367: [ModelFitInspector] Remove bookmark doesn't work, a subtask of T25832: Migrate ModelFit inspector plugin to MitkChart, as Open.