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stein (Daniel Stein)
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Aug 1 2016, 12:10 PM (209 w, 5 d)
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Recent Activity

Aug 2 2016

stein added a comment to T3366: Manual Registration should provide sliders for scaling.

[SVN revision 21397]
FIX (#3366): Added three sliders for scaling the moving image.

Aug 2 2016, 9:35 AM · Bugzilla, MITK
stein added projects to T3366: Manual Registration should provide sliders for scaling: MITK, Bugzilla.
Aug 2 2016, 9:35 AM · Bugzilla, MITK
stein added a comment to T3287: No level window after loading a project file.

[SVN revision 21293]
FIX (#3287): Removed check for visibility property = true for getting subset from DataStorage. Additionally added check for visibility of node from subset to mitkLevelWindowWidgetContextMenu.cpp.

Aug 2 2016, 9:35 AM · Bugzilla, MITK
stein added projects to T3287: No level window after loading a project file: MITK, Bugzilla.
Aug 2 2016, 9:35 AM · Bugzilla, MITK
stein added a comment to T3282: Build system modules for registration code.

[SVN revision 21296]
COMP (#3282): Added dependency on MitkDeformableRegistration for SmallTools.

Aug 2 2016, 9:35 AM · Bugzilla, MITK
stein added a comment to T3282: Build system modules for registration code.

[SVN revision 21294]
FIX (#3282): Created build system modules for rigid and deformable registration code. Code will only be compiled when it is needed by another bundle or module.

Aug 2 2016, 9:35 AM · Bugzilla, MITK
stein added a comment to T3282: Build system modules for registration code.

[SVN revision 21295]
COMP (#3282): Moved testing files into new module structure.

Aug 2 2016, 9:35 AM · Bugzilla, MITK
stein added projects to T3247: LevelWindow does not disappear when last image is deleted from DataStorage: MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
stein added a comment to T3247: LevelWindow does not disappear when last image is deleted from DataStorage.

[SVN revision 21099]
FIX (#3247): DataStorageChanged is now splitted into two methods one for removal of DataTreeNodes and one for changes on them. SetAutoTopMostImage now filters the removed image from DataStorage predicate so that it could not be the selected image anymore.

Aug 2 2016, 9:34 AM · Bugzilla, MITK
stein added projects to T3230: Documentation for LevelWindow and its context menu: MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
stein added a comment to T3229: LevelWindow mode according to some siemens machines.

No, I think this is a pure feature request which can have a lower priority than other bugs for 1.0 release.

Aug 2 2016, 9:34 AM · Bugzilla, MITK
stein added projects to T3229: LevelWindow mode according to some siemens machines: MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
stein added a comment to T3208: BugFix: SetAuto function in mitk::LevelWindow.

[SVN revision 21098]
FIX (#3208): If guessByCentralSlice is set to false the whole image with all timesteps is now considered for calculating the min and max value for level window. Can be accessed via the context menu of the level window slider.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3208: BugFix: SetAuto function in mitk::LevelWindow.

There has already been a possibility to use the whole image for calculating the grayvalue range in the context menu which should be used in cases when the normal way does not lead to sufficient results. Does your change do the same as the context menu option?

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3208: BugFix: SetAuto function in mitk::LevelWindow.

If you think I did not understand your issue correctly, please try to explain it again and feel free to reopen the bug.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3206: Improvement of Level Window Handling.

"- The slider size can be only adjusted clicking on the lower boarder, but not
on the upper."

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3206: Improvement of Level Window Handling.

The bug is now splitted into 3 bugs which block this bug. This bug should be fixed if the three other bugs are fixed.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3200: LevelWindow only works on 'one' image.

[SVN revision 21048]
FIX (#3200): Changed behavior after changing visibility of a node. Added a new property observer to listen for changes on layer property.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3190: Crash when switching from/to RigidRegistration and PointBasedRegistration.

There is an error in QmitkFunctionality leading to a pointer crash. Requesting Core Modification flag

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3190: Crash when switching from/to RigidRegistration and PointBasedRegistration.

I do not understand exactly what you have done for the crash, but in my case the application crashes with every module which is reopened after closing in QmitkFunctionality::PartActivated( cherry::IWorkbenchPartReference::Pointer partRef ). Independent from loading images...

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added projects to T3166: Make RigidRegistration easier extensible: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3166: Make RigidRegistration easier extensible.

[SVN revision 20833]
FIX (#3166): All transforms metrics and optimizer have their own GUI classes which were added to QmitkRigidRegistrationSelector in constructor.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3166: Make RigidRegistration easier extensible.

[SVN revision 20835]
COMP (#3166): Fixed case-sensitive includes of Qt classes and wrong include locations.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3166: Make RigidRegistration easier extensible.

[SVN revision 20836]
COMP (#3166): Fixed case-sensitive includes of Qt classes.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3156: Linker errors in cherryUITestCase.obj with cmake 2.8.

[SVN revision 20870]
FIX (#3156): Fix for a "bug" in CMake, which does not include all transitive link libraries for a given target, in this case the TARGET_LINK_LIBRARIES were not set correctly for cppUnit in debug mode.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added projects to T3156: Linker errors in cherryUITestCase.obj with cmake 2.8: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
stein added a comment to T3131: Load Testpreset button does not work correctly.

[SVN revision 20713]
FIX (#3131): Merged from trunk. Testpresets were added to the bin folder for installer and presets were searched in the correct file now.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added projects to T3131: Load Testpreset button does not work correctly: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added a comment to T3131: Load Testpreset button does not work correctly.

[SVN revision 20712]
FIX (#3131): Testpresets were added to the bin folder for installer and presets were searched in the correct file now.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added a comment to T3117: Online doxygen does not work correctly.

[SVN revision 20818]
DOC (#3117): Changed the registration manuals to be on a single page for each module.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added projects to T3117: Online doxygen does not work correctly: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added projects to T3106: Do not allow 4D data for registration modules: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added a comment to T3106: Do not allow 4D data for registration modules.

[SVN revision 20593]
FIX (#3106): 4D images selected in DataManager will not be processed anymore.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added a comment to T3087: Selected items in PointListWidget does not get a blue selection color.

Is it possible to start the table with a counting number and in the next column "ID ...". It would be nice if the numbers in the table could be consistent to the label numbers of the pointset.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added projects to T3087: Selected items in PointListWidget does not get a blue selection color: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added a comment to T3087: Selected items in PointListWidget does not get a blue selection color.

In that case it should show the PointID + 1.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added a comment to T3087: Selected items in PointListWidget does not get a blue selection color.

It would also be nice if the PointList starts counting with 1 instead of 0.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added projects to T3078: Help pages can not be opened from installed 3M3: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
stein added a comment to T3023: Crash in Rigid Registration - Point Based Registration upon Register.

Many of the logged messages seem to come from the segmentation module which was most probably active at the same time...

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T3022: Crash in Rigid Registration - Deformable Registration when out of memory.

[SVN revision 20545]
FIX (#3022): Error messages are now shown via a message box.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2992: LevelWindow component should use the datamanager selection events.

Just thought about a way to let the DataManger module access an appropriate method in mitkLevelWindowManager directly to tell about the selected Node.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2939: Changes in PointListWidget are not immediately shown in render windows.

Markus, maybe you find the time to look into this issue and find a solution together with Jochen.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2939: Changes in PointListWidget are not immediately shown in render windows: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2937: The modules Visible() method is called before the other modules Hidden() method.

My problem is that I use the Visible and Hidden methods because every new selection in Datamanager call the deactivated methods. My plan is to reset the image colors to greyvalues when the module is not needed anymore (Hidden) and set to red/green colors when the module is visible again and the checkbox is set. At the moment the behavior for switching between two registration modules is:

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2935: Splash screen is on wrong monitor when closing application on the second screen: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2937: The modules Visible() method is called before the other modules Hidden() method: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to F376: SplashScreen1.png.

Splash screen on windows

Aug 2 2016, 9:31 AM
stein added a comment to T2934: RenderWindows are not shown properly after splash screen.

After the splash screen has gone the render windows look something like this until a click is done which lets the windows be rerendered.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to F377: SplashScreen2.png.

Render windows after splash screen

Aug 2 2016, 9:31 AM
stein added a comment to T2934: RenderWindows are not shown properly after splash screen.

After MITK is opened and the splash screen is still shown it looks like this.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2934: RenderWindows are not shown properly after splash screen.

This behavior occurs on windows xp system when starting the application in fullscreen. Maybe you have to first start the application once, maximize it, select a perspective with render windows and close the application, so that these settings were saved for next startup. I can not provide a screenshot yet, because it works well for remote. I think it is because the screen is rerendered after the splash screen closes in remote mode.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2934: RenderWindows are not shown properly after splash screen: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2920: Red green flag doesn't work in all circumstances.

[SVN revision 20090]
FIX (#2920): Changed behavior for switching between modules which caused the red/green visualization bug. Same changes were necessary for all three registration modules.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2914: crash if you rotate.

[SVN revision 20033]
FIX (#2914): Check whether a moving image mask exists before trying to rotate the image mask.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2912: Manual Registration is not considered for later automatic registration.

[SVN revision 20189]
FIX (#2912): Changed geometry update to compose instead of translate to make the changes available for ITK. Changes will now also affect all childnodes.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2911: crash if you click the UNDO button.

Seems to be related to ITK 3.14. Works with ITK 3.16.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2912: Manual Registration is not considered for later automatic registration: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2904: Size grips are not available after switching perspectives: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2907: RenderWindows show wrong plane after loading a 2D image: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2895: Documentation of image pyramid: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2895: Documentation of image pyramid.

Thomas, if you find the time you can reintegrate it. But it needs a documentation on how to use it properly. In that case you can reopen the bug.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2895: Documentation of image pyramid.

[SVN revision 20207]
FIX (#2895): Layout changed to not showing image pyramid and preprocessing group box for 3M. Both group boxes are set to hide();

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2891: Installed 3M version has runtime error at startup: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2891: Installed 3M version has runtime error at startup.

The same installer version works well for my windows system at work.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2891: Installed 3M version has runtime error at startup.

My windows system with Service Pack 2 at home gives the following errors at startup with installer version: r20098.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2890: 3M installer has only uninstall as startmenu entry: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2880: Perspective for Registration.

[SVN revision 19971]
COMP (#2880): Added missing files.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added projects to T2880: Perspective for Registration: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2880: Perspective for Registration.

[SVN revision 19970]
FIX (#2880): A perspective for registration modules has been added.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
stein added a comment to T2871: MITK can open *.nii images but it is not selectable from open dialog.

[SVN revision 20044]
FIX (#2871): Added *.nii file format to file open dialogs.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added projects to T2871: MITK can open *.nii images but it is not selectable from open dialog: MITK, Bugzilla.
Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2842: Rework of B-Spline Registration for 3M3.

Set BSplines part to hide() so that it is invisible in 3M3 and can not be used for registration.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added projects to T2842: Rework of B-Spline Registration for 3M3: MITK, Bugzilla.
Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2842: Rework of B-Spline Registration for 3M3.

Thomas, if you find the time you can reintegrate it. But it has to be a easy to use interface and there has to be a written testcase and documentation.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2836: Doxygen is not generated correctly..

I recently changed the name from Functionallity to Module. I also just changed the text and images, I did not copy the text or something like that so that it could be listed twice. Is there any other possibility why the old version is added at the bottom, what kind of an error within the .dox file could that be?

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2836: Doxygen is not generated correctly..

Work in progress? Doxygen pages are still not shown correctly.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added projects to T2836: Doxygen is not generated correctly.: MITK, Bugzilla.
Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added projects to T2788: Segmentation tools are disabled: MITK, Bugzilla.
Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2770: Describe behavior of region growing tool.

Philipp, could you please write some lines for the new behavior?

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2770: Describe behavior of region growing tool.

Philipp, could you please write some lines for the new behavior?

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2749: Registration: progress bar.

[SVN revision 19747]
FIX (#2749): Added remaining progress to ProgressBar so that it won't stay at about 90% after registration process.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2748: Registration: GUI layout.

[SVN revision 19757]
FIX (#2748): Introduced a checkbox for switching between standard registration and registration with ICP.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2748: Registration: GUI layout.

[SVN revision 19756]
FIX (#2748): Used a spacer to decrease size.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2748: Registration: GUI layout.

[SVN revision 19755]
FIX (#2748): PointListWidget will now adapt its size to the available space.

Aug 2 2016, 9:30 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 19898]
FIX (#2731): Demons Registration changed so that it adds the deformation field and result image to DataStorage after registration.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 20206]
FIX (#2731): Layout changed to only provide Demonsbased registration methods for 3M. BSpline is set to hide();

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 20219]
FIX (#2731): The registration button has an icon and the Documentation is adapted.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2729: Change Layout of RigidRegistration.

[SVN revision 20216]
FIX (#2729): A default preset is loaded at startup, the registration, und and redo buttons have icons and the Documentation is adapted.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 19793]
FIX (#2731): Changed layout for a better usability.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 19672]
FIX (#2731): Added Listener for Datamanger selections. Removed ComboBoxes and other unnecessary methods.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 19681]
COMP (#2731): Fix warnings.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added projects to T2730: Change Layout of PointBasedRegistration: MITK, Bugzilla.
Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 19687]
FIX (#2731): SelectionListener is now instantiated correctly.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2729: Change Layout of RigidRegistration.

[SVN revision 19962]
COMP (#2729): Added space betweeen two >.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 19870]
FIX (#2731): Fixed removal of DataManager selection listener. Fixed not working connection.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2730: Change Layout of PointBasedRegistration.

[SVN revision 19670]
FIX (#2730): Removed unnecessary code.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2731: Change Layout of DeformableRegistration.

[SVN revision 19760]
FIX (#2731): Added call to unregister DataManager listener on destruction. Removed unnecessary connections.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2730: Change Layout of PointBasedRegistration.

[SVN revision 19794]
FIX (#2730): Changed layout for a better usability.

Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added projects to T2731: Change Layout of DeformableRegistration: MITK, Bugzilla.
Aug 2 2016, 9:29 AM · Bugzilla, MITK
stein added a comment to T2730: Change Layout of PointBasedRegistration.

[SVN revision 19655]
FIX (#2730): Added Listener for Datamanger selections. Removed ComboBoxes and other unnecessary methods.

Aug 2 2016, 9:29 AM · Bugzilla, MITK