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new file mode 100644
index 0000000..9e2ffcc
Binary files /dev/null and b/DiffusionImaging/Fiberfox/SignalGen_BrainSlice.fib differ
diff --git a/DiffusionImaging/Fiberfox/SignalGen_BrainSliceTemplate.nii.gz b/DiffusionImaging/Fiberfox/SignalGen_BrainSliceTemplate.nii.gz
new file mode 100644
index 0000000..b297adb
Binary files /dev/null and b/DiffusionImaging/Fiberfox/SignalGen_BrainSliceTemplate.nii.gz differ
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_1.bvals
new file mode 100644
index 0000000..bf9b80d
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_1.bvals
@@ -0,0 +1 @@
+0 1000 2000 3000 0 1000 3000 2000 0 1000 2000 3000 0
\ No newline at end of file
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_1.bvecs
new file mode 100644
index 0000000..142a43c
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_1.bvecs
@@ -0,0 +1,3 @@
+0 1 1 1 0 0 0 0 0 0 0 0 0
+0 0 0 0 0 1 1 1 0 0 0 0 0
+0 0 0 0 0 0 0 0 0 1 1 1 0
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp
new file mode 100644
index 0000000..b2a1020
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp
@@ -0,0 +1,145 @@
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+ false
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+
+ false
+ true
+ StickTensorBallBall
+ _RELAX_SPIKES_MOTION
+ /tmp/
+
+
+ fiber
+ stick
+ 0.0020500000000000002
+ 41
+ 402
+ 1
+
+
+ fiber
+ tensor
+ 0.0015
+ 0.00042999999999999999
+ 0.00042999999999999999
+ 63
+ 1764
+ 2
+
+
+ non-fiber
+ ball
+ 0.00064999999999999997
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+ 1115
+ 3
+
+
+ non-fiber
+ ball
+ 0.0028
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+ 4582
+ 4
+
+
+
+
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp.bvals
new file mode 100644
index 0000000..d3bf7a3
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp.bvals
@@ -0,0 +1 @@
+0 1000 2000 3000 0 1000 3000 2000 0 1000 2000 3000 0
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp.bvecs
new file mode 100644
index 0000000..a6bc78f
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp.bvecs
@@ -0,0 +1,3 @@
+0 1 1 1 0 0 0 0 0 0 0 0 0
+0 0 0 0 0 1 1 1 0 0 0 0 0
+0 0 0 0 0 0 0 0 0 1 1 1 0
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp_MASK.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp_MASK.nii.gz
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index 0000000..723e4d2
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Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp_VOLUME2.nii.gz differ
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new file mode 100644
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Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_1.ffp_VOLUME4.nii.gz differ
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.bvals
new file mode 100644
index 0000000..bf9b80d
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.bvals
@@ -0,0 +1 @@
+0 1000 2000 3000 0 1000 3000 2000 0 1000 2000 3000 0
\ No newline at end of file
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.bvecs
new file mode 100644
index 0000000..142a43c
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.bvecs
@@ -0,0 +1,3 @@
+0 1 1 1 0 0 0 0 0 0 0 0 0
+0 0 0 0 0 1 1 1 0 0 0 0 0
+0 0 0 0 0 0 0 0 0 1 1 1 0
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.nii.gz
new file mode 100644
index 0000000..4b65a8a
Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_1_OUT.nii.gz differ
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp b/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp
new file mode 100644
index 0000000..835b424
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp
@@ -0,0 +1,145 @@
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+ false
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+ false
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+ StickTensorBallBall
+ _RELAX_SPIKES_MOTION
+ /tmp/
+
+
+ fiber
+ stick
+ 0.0020500000000000002
+ 41
+ 402
+ 1
+
+
+ fiber
+ tensor
+ 0.0015
+ 0.00042999999999999999
+ 0.00042999999999999999
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+ non-fiber
+ ball
+ 0.0028
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp.bvals
new file mode 100644
index 0000000..d3bf7a3
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp.bvals
@@ -0,0 +1 @@
+0 1000 2000 3000 0 1000 3000 2000 0 1000 2000 3000 0
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp.bvecs
new file mode 100644
index 0000000..a6bc78f
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp.bvecs
@@ -0,0 +1,3 @@
+0 1 1 1 0 0 0 0 0 0 0 0 0
+0 0 0 0 0 1 1 1 0 0 0 0 0
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp_MASK.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_2.ffp_MASK.nii.gz
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new file mode 100644
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.bvals
new file mode 100644
index 0000000..bf9b80d
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.bvals
@@ -0,0 +1 @@
+0 1000 2000 3000 0 1000 3000 2000 0 1000 2000 3000 0
\ No newline at end of file
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.bvecs
new file mode 100644
index 0000000..142a43c
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.bvecs
@@ -0,0 +1,3 @@
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.nii.gz
new file mode 100644
index 0000000..515b33b
Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.nii.gz differ
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp
new file mode 100644
index 0000000..70fe67c
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp
@@ -0,0 +1,145 @@
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+
+
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp.bvals
new file mode 100644
index 0000000..ed52bc6
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp.bvals
@@ -0,0 +1 @@
+0 0 0 0 0 0 0 0 0 0 0 0 0
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp.bvecs
new file mode 100644
index 0000000..144c287
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp.bvecs
@@ -0,0 +1,3 @@
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_MASK.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_MASK.nii.gz
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Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_MASK.nii.gz differ
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME1.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME1.nii.gz
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME2.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME2.nii.gz
new file mode 100644
index 0000000..499cb70
Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME2.nii.gz differ
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME3.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME3.nii.gz
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME4.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME4.nii.gz
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Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_3.ffp_VOLUME4.nii.gz differ
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.bvals
new file mode 100644
index 0000000..4c57367
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.bvals
@@ -0,0 +1 @@
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\ No newline at end of file
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.bvecs
new file mode 100644
index 0000000..0845a2e
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.bvecs
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diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.log b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.log
new file mode 100644
index 0000000..b19ab90
--- /dev/null
+++ b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.log
@@ -0,0 +1,41 @@
+Logfile: /home/neher/mitk/mitkdata/DiffusionImaging/Fiberfox//BrainSlice_3.log
+0:0:0 > Starting Fiberfox dMRI simulation
+Output image spacing: [2.5,2.5,2.5]
+Output image size: [72,87,1]
+Working image spacing: [2.5,2.5,2.5]
+Working image size: [72,87,1]
+Resampling tissue mask
+Using tissue mask
+Using volume fraction map for fiber compartment 1
+Using volume fraction map for fiber compartment 2
+Using volume fraction map for non-fiber compartment 1
+Using volume fraction map for non-fiber compartment 2
+
+Setting fiber radius to 77.22µm to obtain full voxel.
+
+0:0:0 > Generating 4-compartment diffusion-weighted signal.
+b-values: 0
+Volumes: 13
+
+
+0% 10 20 30 40 50 60 70 80 90 100%
+|----|----|----|----|----|----|----|----|----|----|
+***************************************************
+
+
+0:0:0 > Simulating k-space acquisition using 1 coil(s)
+Acquisition type: single shot EPI
+Simulating signal relaxation
+Parallel volumes: 4
+Threads per slice: 4
+0% 10 20 30 40 50 60 70 80 90 100%
+|----|----|----|----|----|----|----|----|----|----|
+***************************************************
+
+0:0:7 > Finalizing image
+Adding signal drift: 0.0649999976
+0% 10 20 30 40 50 60 70 80 90 100%
+|----|----|----|----|----|----|----|----|----|----|
+***************************************************
+
+0:0:7 > Finished simulation
diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.nii.gz
new file mode 100644
index 0000000..dea5053
Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_3_OUT.nii.gz differ