diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.nii.gz index dfde5ef..a8c4397 100644 Binary files a/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.nii.gz and b/DiffusionImaging/Fiberfox/params/BrainSlice_2_OUT.nii.gz differ diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp new file mode 100644 index 0000000..e623850 --- /dev/null +++ b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp @@ -0,0 +1,145 @@ + + + + 0 + 0.10000000000000001 + 100 + + 1 + 0 + 0 + 0 + + + 0 + 0 + 0 + + + 0 + 0 + 0 + + + 1 + 1 + 1 + + true + false + false + true + + + + + 196 + 254 + 11 + + + 0.699999988 + 0.699999988 + 0.699999988 + + + 68.1999969 + 104.300003 + 11.999999 + + + -1 + 0 + 0 + 0 + -1 + 0 + 0 + 0 + 1 + + + 0 + 0 + 1 + false + 0.75 + 7828.38916 + 5520 + 921 + 90 + 1 + 50 + true + 0 + true + false + + 5 + 1 + 0.397000015 + 0.0199999996 + 70 + 1 + 0.0649999976 + false + true + 5 + 0 + 0 + 0 + 0 + 10 + random + false + true + true + false + false + true + false + false + + false + true + StickTensorBallBall + _RELAX_SPIKES_MOTION + /tmp/ + + + fiber + stick + 0.0020500000000000002 + 41 + 402 + 1 + + + fiber + tensor + 0.0015 + 0.00042999999999999999 + 0.00042999999999999999 + 63 + 1764 + 2 + + + non-fiber + ball + 0.00064999999999999997 + 68 + 1115 + 3 + + + non-fiber + ball + 0.0028 + 885 + 4582 + 4 + + + + diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp.bvals new file mode 100644 index 0000000..bf9b80d --- /dev/null +++ b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp.bvals @@ -0,0 +1 @@ +0 1000 2000 3000 0 1000 3000 2000 0 1000 2000 3000 0 \ No newline at end of file diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp.bvecs new file mode 100644 index 0000000..142a43c --- /dev/null +++ b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp.bvecs @@ -0,0 +1,3 @@ +0 1 1 1 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 1 1 1 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 1 1 1 0 diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_MASK.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_MASK.nii.gz new file mode 100644 index 0000000..723e4d2 Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_MASK.nii.gz differ diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME1.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME1.nii.gz new file mode 100644 index 0000000..bfc4eef Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME1.nii.gz differ diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME2.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME2.nii.gz new file mode 100644 index 0000000..499cb70 Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME2.nii.gz differ diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME3.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME3.nii.gz new file mode 100644 index 0000000..5a313a7 Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME3.nii.gz differ diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME4.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME4.nii.gz new file mode 100644 index 0000000..d59ebf9 Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_4.ffp_VOLUME4.nii.gz differ diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.bvals b/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.bvals new file mode 100644 index 0000000..bf9b80d --- /dev/null +++ b/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.bvals @@ -0,0 +1 @@ +0 1000 2000 3000 0 1000 3000 2000 0 1000 2000 3000 0 \ No newline at end of file diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.bvecs b/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.bvecs new file mode 100644 index 0000000..09a4cc9 --- /dev/null +++ b/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.bvecs @@ -0,0 +1,3 @@ +0 1 1 1 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 -1 -1 -1 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 1 1 1 0 diff --git a/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.nii.gz b/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.nii.gz new file mode 100644 index 0000000..2bfce44 Binary files /dev/null and b/DiffusionImaging/Fiberfox/params/BrainSlice_4_OUT.nii.gz differ diff --git a/DiffusionImaging/Fiberfox/params/param1.dwi b/DiffusionImaging/Fiberfox/params/param1.dwi index 376fdce..3438ed3 100644 Binary files a/DiffusionImaging/Fiberfox/params/param1.dwi and b/DiffusionImaging/Fiberfox/params/param1.dwi differ diff --git a/DiffusionImaging/Fiberfox/params/param2.dwi b/DiffusionImaging/Fiberfox/params/param2.dwi index ce47482..f71e09f 100644 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