diff --git a/Modules/DiffusionImaging/Reconstruction/itkDiffusionMultiShellQballReconstructionImageFilter.cpp b/Modules/DiffusionImaging/Reconstruction/itkDiffusionMultiShellQballReconstructionImageFilter.cpp index 700f30d58c..28fc1c1730 100644 --- a/Modules/DiffusionImaging/Reconstruction/itkDiffusionMultiShellQballReconstructionImageFilter.cpp +++ b/Modules/DiffusionImaging/Reconstruction/itkDiffusionMultiShellQballReconstructionImageFilter.cpp @@ -1,1215 +1,1220 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef __itkDiffusionMultiShellQballReconstructionImageFilter_cpp #define __itkDiffusionMultiShellQballReconstructionImageFilter_cpp #include #include #include #include #include #include #include #include #include #include #include "mitkDiffusionFunctionCollection.h" #include "itkPointShell.h" #include #include namespace itk { template< class T, class TG, class TO, int L, int NODF> DiffusionMultiShellQballReconstructionImageFilter ::DiffusionMultiShellQballReconstructionImageFilter() : m_GradientDirectionContainer(NULL), m_NumberOfGradientDirections(0), m_NumberOfBaselineImages(1), m_Threshold(NumericTraits< ReferencePixelType >::NonpositiveMin()), m_BValue(1.0), m_Lambda(0.0), m_IsHemisphericalArrangementOfGradientDirections(false), m_IsArithmeticProgession(false), m_ReconstructionType(Mode_Standard1Shell), m_Interpolation_Flag(false), m_Interpolation_SHT1_inv(0), m_Interpolation_SHT2_inv(0), m_Interpolation_SHT3_inv(0), m_TARGET_SH_shell1(0), m_TARGET_SH_shell2(0), m_TARGET_SH_shell3(0) { // At least 1 inputs is necessary for a vector image. // For images added one at a time we need at least six this->SetNumberOfRequiredInputs( 1 ); } template void DiffusionMultiShellQballReconstructionImageFilter ::Normalize( OdfPixelType & out) { for(int i=0; i void DiffusionMultiShellQballReconstructionImageFilter ::Projection1(vnl_vector & vec, double delta) { if (delta==0){ //Clip attenuation values. If att<0 => att=0, if att>1 => att=1 for (int i=0; i=0 && vec[i]<=1)*vec[i]+(vec[i]>1); } else{ //Use function from Aganj et al, MRM, 2010 for (int i=0; i< vec.size(); i++) vec[i]=CalculateThreashold(vec[i], delta); } } template double DiffusionMultiShellQballReconstructionImageFilter ::CalculateThreashold(const double value, const double delta) { return (value<0)*(0.5*delta) + (value>=0 && value=delta && value<1-delta)*value+(value>=1-delta && value<1)*(1-0.5*delta-0.5*((1-value)*(1-value))/delta) + (value>=1)*(1-0.5*delta); } template void DiffusionMultiShellQballReconstructionImageFilter ::Projection2( vnl_vector & E1,vnl_vector & E2, vnl_vector & E3, double delta ) { const double sF = sqrt(5.0); vnl_vector vOnes(m_MaxDirections); vOnes.fill(1.0); vnl_matrix T0(m_MaxDirections, 3); vnl_matrix C(m_MaxDirections, 7); vnl_matrix A(m_MaxDirections, 7); vnl_matrix B(m_MaxDirections, 7); vnl_vector s0(m_MaxDirections); vnl_vector a0(m_MaxDirections); vnl_vector b0(m_MaxDirections); vnl_vector ta(m_MaxDirections); vnl_vector tb(m_MaxDirections); vnl_vector e(m_MaxDirections); vnl_vector m(m_MaxDirections); vnl_vector a(m_MaxDirections); vnl_vector b(m_MaxDirections); // logarithmierung aller werte in E for(int i = 0 ; i < m_MaxDirections; i++) { T0(i,0) = -log(E1(i)); T0(i,1) = -log(E2(i)); T0(i,2) = -log(E3(i)); } //T0 = -T0.apply(std::log); // Summeiere Zeilenweise über alle Shells sum = E1+E2+E3 for(int i = 0 ; i < m_MaxDirections; i++) { s0[i] = T0(i,0) + T0(i,1) + T0(i,2); } for(int i = 0; i < m_MaxDirections; i ++) { // Alle Signal-Werte auf der Ersten shell E(N,0) normiert auf s0 a0[i] = T0(i,0) / s0[i]; // Alle Signal-Werte auf der Zweiten shell E(N,1) normiert auf s0 b0[i] = T0(i,1) / s0[i]; } ta = a0 * 3.0; tb = b0 * 3.0; e = tb - (ta * 2.0); m = (tb * 2.0 ) + ta; for(int i = 0; i =1-3*(sF+2)*delta); C(i,2) = (m[i] > 3-3*sF*delta) && (-1+3*(2*sF+5)*delta= 3-3*sF*delta && e[i] >= -3 *sF * delta); C(i,4) = (2.5 + 1.5*(5+sF)*delta < m[i] && m[i] < 3-3*sF*delta && e[i] > -3*sF*delta); C(i,5) = (ta[i] <= 0.5+1.5 *(sF+1)*delta && m[i] <= 2.5 + 1.5 *(5+sF) * delta); C(i,6) = !((bool) C(i,0) ||(bool) C(i,1) ||(bool) C(i,2) ||(bool) C(i,3) ||(bool) C(i,4) ||(bool) C(i,5) ); // ~ANY(C(i,[0-5] ),2) A(i,0)=(bool)C(i,0) * a0(i); A(i,1)=(bool)C(i,1) * (1.0/3.0-(sF+2)*delta); A(i,2)=(bool)C(i,2) * (0.2+0.8*a0(i)-0.4*b0(i)-delta/sF); A(i,3)=(bool)C(i,3) * (0.2+delta/sF); A(i,4)=(bool)C(i,4) * (0.2*a0(i)+0.4*b0(i)+2*delta/sF); A(i,5)=(bool)C(i,5) * (1.0/6.0+0.5*(sF+1)*delta); A(i,6)=(bool)C(i,6) * a0(i); B(i,0)=(bool)C(i,0) * (1.0/3.0+delta); B(i,1)=(bool)C(i,1) * (1.0/3.0+delta); B(i,2)=(bool)C(i,2) * (0.4-0.4*a0(i)+0.2*b0(i)-2*delta/sF); B(i,3)=(bool)C(i,3) * (0.4-3*delta/sF); B(i,4)=(bool)C(i,4) * (0.4*a0(i)+0.8*b0(i)-delta/sF); B(i,5)=(bool)C(i,5) * (1.0/3.0+delta); B(i,6)=(bool)C(i,6) * b0(i); } for(int i = 0 ; i < m_MaxDirections; i++) { double sumA = 0; double sumB = 0; for(int j = 0 ; j < 7; j++) { sumA += A(i,j); sumB += B(i,j); } a[i] = sumA; b[i] = sumB; } for(int i = 0; i < m_MaxDirections; i++) { E1(i) = exp(-(a[i]*s0[i])); E2(i) = exp(-(b[i]*s0[i])); E3(i) = exp(-((1-a[i]-b[i])*s0[i])); } } template void DiffusionMultiShellQballReconstructionImageFilter ::Projection3( vnl_vector & A, vnl_vector & a, vnl_vector & b, double delta0) { const double s6 = sqrt(6.0); const double s15 = s6/2.0; vnl_vector delta(a.size()); delta.fill(delta0); vnl_matrix AM(a.size(), 15); vnl_matrix aM(a.size(), 15); vnl_matrix bM(a.size(), 15); vnl_matrix B(a.size(), 15); AM.set_column(0, A); AM.set_column(1, A); AM.set_column(2, A); AM.set_column(3, delta); AM.set_column(4, (A+a-b - (delta*s6))/3.0); AM.set_column(5, delta); AM.set_column(6, delta); AM.set_column(7, delta); AM.set_column(8, A); AM.set_column(9, 0.2*(a*2+A-2*(s6+1)*delta)); AM.set_column(10,0.2*(b*(-2)+A+2-2*(s6+1)*delta)); AM.set_column(11, delta); AM.set_column(12, delta); AM.set_column(13, delta); AM.set_column(14, 0.5-(1+s15)*delta); aM.set_column(0, a); aM.set_column(1, a); aM.set_column(2, -delta + 1); aM.set_column(3, a); aM.set_column(4, (A*2+a*5+b+s6*delta)/6.0); aM.set_column(5, a); aM.set_column(6, -delta + 1); aM.set_column(7, 0.5*(a+b)+(1+s15)*delta); aM.set_column(8, -delta + 1); aM.set_column(9, 0.2*(a*4+A*2+(s6+1)*delta)); aM.set_column(10, -delta + 1); aM.set_column(11, (s6+3)*delta); aM.set_column(12, -delta + 1); aM.set_column(13, -delta + 1); aM.set_column(14, -delta + 1); bM.set_column(0, b); bM.set_column(1, delta); bM.set_column(2, b); bM.set_column(3, b); bM.set_column(4, (A*(-2)+a+b*5-s6*delta)/6.0); bM.set_column(5, delta); bM.set_column(6, b); bM.set_column(7, 0.5*(a+b)-(1+s15)*delta); bM.set_column(8, delta); bM.set_column(9, delta); bM.set_column(10, 0.2*(b*4-A*2+1-(s6+1)*delta)); bM.set_column(11, delta); bM.set_column(12, delta); bM.set_column(13, -delta*(s6+3) + 1); bM.set_column(14, delta); delta0 *= 0.99; vnl_matrix R2(a.size(), 15); std::vector I(a.size()); for (int i=0; idelta0 && aM(i,j)<1-delta0) R2(i,j) = (AM(i,j)-A(i))*(AM(i,j)-A(i))+ (aM(i,j)-a(i))*(aM(i,j)-a(i))+(bM(i,j)-b(i))*(bM(i,j)-b(i)); else R2(i,j) = 1e20; } unsigned int index = 0; double minvalue = 999; for(int j = 0 ; j < 15 ; j++) { if(R2(i,j) < minvalue){ minvalue = R2(i,j); index = j; } } I[i] = index; } for (int i=0; i < A.size(); i++){ A(i) = AM(i,(int)I[i]); a(i) = aM(i,(int)I[i]); b(i) = bM(i,(int)I[i]); } } template void DiffusionMultiShellQballReconstructionImageFilter ::S_S0Normalization( vnl_vector & vec, double S0 ) { for(int i = 0; i < vec.size(); i++) { if (S0==0) S0 = 0.01; vec[i] /= S0; } } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::DoubleLogarithm(vnl_vector & vec) { for(int i = 0; i < vec.size(); i++) { vec[i] = log(-log(vec[i])); } } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::SetGradientImage( GradientDirectionContainerType *gradientDirection , const GradientImagesType *gradientImage , float bvalue) { m_BValue = bvalue; m_GradientDirectionContainer = gradientDirection; m_NumberOfBaselineImages = 0; if(m_BValueMap.size() == 0){ itkWarningMacro(<< "DiffusionMultiShellQballReconstructionImageFilter.cpp : no GradientIndexMapAvalible"); GradientDirectionContainerType::ConstIterator gdcit; for( gdcit = m_GradientDirectionContainer->Begin(); gdcit != m_GradientDirectionContainer->End(); ++gdcit) { double bValueKey = int(((m_BValue * gdcit.Value().two_norm() * gdcit.Value().two_norm())+7.5)/10)*10; m_BValueMap[bValueKey].push_back(gdcit.Index()); } } if(m_BValueMap.find(0) == m_BValueMap.end()) { itkExceptionMacro(<< "DiffusionMultiShellQballReconstructionImageFilter.cpp : GradientIndxMap with no b-Zero indecies found: check input image"); } m_NumberOfBaselineImages = m_BValueMap[0].size(); m_NumberOfGradientDirections = gradientDirection->Size() - m_NumberOfBaselineImages; // ensure that the gradient image we received has as many components as // the number of gradient directions if( gradientImage->GetVectorLength() != m_NumberOfBaselineImages + m_NumberOfGradientDirections ) { itkExceptionMacro( << m_NumberOfGradientDirections << " gradients + " << m_NumberOfBaselineImages << "baselines = " << m_NumberOfGradientDirections + m_NumberOfBaselineImages << " directions specified but image has " << gradientImage->GetVectorLength() << " components."); } ProcessObject::SetNthInput( 0, const_cast< GradientImagesType* >(gradientImage) ); std::string gradientImageClassName(ProcessObject::GetInput(0)->GetNameOfClass()); if ( strcmp(gradientImageClassName.c_str(),"VectorImage") != 0 ) itkExceptionMacro( << "There is only one Gradient image. I expect that to be a VectorImage. But its of type: " << gradientImageClassName ); m_BZeroImage = BZeroImageType::New(); typename GradientImagesType::Pointer img = static_cast< GradientImagesType * >( ProcessObject::GetInput(0) ); m_BZeroImage->SetSpacing( img->GetSpacing() ); // Set the image spacing m_BZeroImage->SetOrigin( img->GetOrigin() ); // Set the image origin m_BZeroImage->SetDirection( img->GetDirection() ); // Set the image direction m_BZeroImage->SetLargestPossibleRegion( img->GetLargestPossibleRegion()); m_BZeroImage->SetBufferedRegion( img->GetLargestPossibleRegion() ); m_BZeroImage->Allocate(); m_CoefficientImage = CoefficientImageType::New(); m_CoefficientImage->SetSpacing( img->GetSpacing() ); // Set the image spacing m_CoefficientImage->SetOrigin( img->GetOrigin() ); // Set the image origin m_CoefficientImage->SetDirection( img->GetDirection() ); // Set the image direction m_CoefficientImage->SetLargestPossibleRegion( img->GetLargestPossibleRegion()); m_CoefficientImage->SetBufferedRegion( img->GetLargestPossibleRegion() ); m_CoefficientImage->Allocate(); } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::BeforeThreadedGenerateData() { m_ReconstructionType = Mode_Standard1Shell; if(m_BValueMap.size() == 4 ){ BValueMapIteraotr it = m_BValueMap.begin(); it++; // skip b0 entry const int bValue_shell1 = it->first; const int size_shell1 = it->second.size(); IndiciesVector shell1 = it->second; it++; const int bValue_shell2 = it->first; const int size_shell2 = it->second.size(); IndiciesVector shell2 = it->second; it++; const int bValue_shell3 = it->first; const int size_shell3 = it->second.size(); IndiciesVector shell3 = it->second; // arithmetic progrssion if(bValue_shell2 - bValue_shell1 == bValue_shell1 && bValue_shell3 - bValue_shell2 == bValue_shell1 ) { // check if Interpolation is needed // if shells with different numbers of directions exist m_Interpolation_Flag = false; if(size_shell1 != size_shell2 || size_shell2 != size_shell3 || size_shell1 != size_shell3) { m_Interpolation_Flag = true; MITK_INFO << "Shell interpolation: shells with different numbers of directions"; } else { // else if each shell holds same numbers of directions, but the gradient direction differ more than one 1 degree m_Interpolation_Flag = CheckForDifferingShellDirections(); - MITK_INFO << "Shell interpolation: gradient direction differ more than one 1 degree"; + if(m_Interpolation_Flag) MITK_INFO << "Shell interpolation: gradient direction differ more than one 1 degree"; } m_ReconstructionType = Mode_Analytical3Shells; if(m_Interpolation_Flag) { - int interp_SHOrder_shell1 = 10; + int interp_SHOrder_shell1 = 6; while( ((interp_SHOrder_shell1+1)*(interp_SHOrder_shell1+2)/2) > size_shell1 && interp_SHOrder_shell1 > L ) interp_SHOrder_shell1 -= 2 ; const int number_coeffs_shell1 = (int)(interp_SHOrder_shell1*interp_SHOrder_shell1 + interp_SHOrder_shell1 + 2.0)/2.0 + interp_SHOrder_shell1; - int interp_SHOrder_shell2 = 10; + int interp_SHOrder_shell2 = 6; while( ((interp_SHOrder_shell2+1)*(interp_SHOrder_shell2+2)/2) > size_shell2 && interp_SHOrder_shell2 > L ) interp_SHOrder_shell2 -= 2 ; const int number_coeffs_shell2 = (int)(interp_SHOrder_shell2*interp_SHOrder_shell2 + interp_SHOrder_shell2 + 2.0)/2.0 + interp_SHOrder_shell2; - int interp_SHOrder_shell3 = 10; + int interp_SHOrder_shell3 = 6; while( ((interp_SHOrder_shell3+1)*(interp_SHOrder_shell3+2)/2) > size_shell3 && interp_SHOrder_shell3 > L ) interp_SHOrder_shell3 -= 2 ; const int number_coeffs_shell3 = (int)(interp_SHOrder_shell3*interp_SHOrder_shell3 + interp_SHOrder_shell3 + 2.0)/2.0 + interp_SHOrder_shell3; + MITK_INFO << "Debug Information: Multishell Reconstruction filter - Interpolation"; + MITK_INFO << "Shell 1 - SHOrder: " << interp_SHOrder_shell1 << " Number of Coeffs: " << number_coeffs_shell1; + MITK_INFO << "Shell 2 - SHOrder: " << interp_SHOrder_shell2 << " Number of Coeffs: " << number_coeffs_shell2; + MITK_INFO << "Shell 3 - SHOrder: " << interp_SHOrder_shell3 << " Number of Coeffs: " << number_coeffs_shell3; + // Create direction container for all directions (no duplicates, different directions from all shells) IndiciesVector all_directions_container = GetAllDirections(); m_MaxDirections = all_directions_container.size(); // create target SH-Basis vnl_matrix * Q = new vnl_matrix(3, m_MaxDirections); ComputeSphericalFromCartesian(Q, all_directions_container); m_TARGET_SH_shell1 = new vnl_matrix(m_MaxDirections, number_coeffs_shell1); ComputeSphericalHarmonicsBasis(Q, m_TARGET_SH_shell1, interp_SHOrder_shell1); delete Q; Q = new vnl_matrix(3, m_MaxDirections); ComputeSphericalFromCartesian(Q, all_directions_container); m_TARGET_SH_shell2 = new vnl_matrix(m_MaxDirections, number_coeffs_shell2); ComputeSphericalHarmonicsBasis(Q, m_TARGET_SH_shell2, interp_SHOrder_shell2); delete Q; Q = new vnl_matrix(3, m_MaxDirections); ComputeSphericalFromCartesian(Q, all_directions_container); m_TARGET_SH_shell3 = new vnl_matrix(m_MaxDirections, number_coeffs_shell3); ComputeSphericalHarmonicsBasis(Q, m_TARGET_SH_shell3, interp_SHOrder_shell3); delete Q; // end creat target SH-Basis // create measured-SHBasis // Shell 1 vnl_matrix * tempSHBasis; vnl_matrix_inverse * temp; Q = new vnl_matrix(3, shell1.size()); ComputeSphericalFromCartesian(Q, shell1); tempSHBasis = new vnl_matrix(shell1.size(), number_coeffs_shell1); ComputeSphericalHarmonicsBasis(Q, tempSHBasis, interp_SHOrder_shell1); temp = new vnl_matrix_inverse((*tempSHBasis)); m_Interpolation_SHT1_inv = new vnl_matrix(temp->inverse()); delete Q; delete temp; delete tempSHBasis; // Shell 2 Q = new vnl_matrix(3, shell2.size()); ComputeSphericalFromCartesian(Q, shell2); tempSHBasis = new vnl_matrix(shell2.size(), number_coeffs_shell2); ComputeSphericalHarmonicsBasis(Q, tempSHBasis, interp_SHOrder_shell2); temp = new vnl_matrix_inverse((*tempSHBasis)); m_Interpolation_SHT2_inv = new vnl_matrix(temp->inverse()); delete Q; delete temp; delete tempSHBasis; // Shell 3 Q = new vnl_matrix(3, shell3.size()); ComputeSphericalFromCartesian(Q, shell3); tempSHBasis = new vnl_matrix(shell3.size(), number_coeffs_shell3); ComputeSphericalHarmonicsBasis(Q, tempSHBasis, interp_SHOrder_shell3); temp = new vnl_matrix_inverse((*tempSHBasis)); m_Interpolation_SHT3_inv = new vnl_matrix(temp->inverse()); delete Q; delete temp; delete tempSHBasis; ComputeReconstructionMatrix(all_directions_container); return; }else { ComputeReconstructionMatrix(shell1); } } } if(m_BValueMap.size() > 2 && m_ReconstructionType != Mode_Analytical3Shells) { m_ReconstructionType = Mode_NumericalNShells; } if(m_BValueMap.size() == 2){ BValueMapIteraotr it = m_BValueMap.begin(); it++; // skip b0 entry IndiciesVector shell = it->second; ComputeReconstructionMatrix(shell); } } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::ThreadedGenerateData(const OutputImageRegionType& outputRegionForThread, int NumberOfThreads) { itk::TimeProbe clock; clock.Start(); switch(m_ReconstructionType) { case Mode_Standard1Shell: StandardOneShellReconstruction(outputRegionForThread); break; case Mode_Analytical3Shells: AnalyticalThreeShellReconstruction(outputRegionForThread); break; case Mode_NumericalNShells: break; } clock.Stop(); MITK_INFO << "Reconstruction in : " << clock.GetTotal() << " s"; } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::StandardOneShellReconstruction(const OutputImageRegionType& outputRegionForThread) { // Get output image pointer typename OutputImageType::Pointer outputImage = static_cast< OutputImageType * >(ProcessObject::GetOutput(0)); // Get input gradient image pointer typename GradientImagesType::Pointer gradientImagePointer = static_cast< GradientImagesType * >( ProcessObject::GetInput(0) ); // ImageRegionIterator for the output image ImageRegionIterator< OutputImageType > oit(outputImage, outputRegionForThread); oit.GoToBegin(); // ImageRegionIterator for the BZero (output) image ImageRegionIterator< BZeroImageType > bzeroIterator(m_BZeroImage, outputRegionForThread); bzeroIterator.GoToBegin(); // Const ImageRegionIterator for input gradient image typedef ImageRegionConstIterator< GradientImagesType > GradientIteratorType; GradientIteratorType git(gradientImagePointer, outputRegionForThread ); git.GoToBegin(); BValueMapIteraotr it = m_BValueMap.begin(); it++; // skip b0 entry IndiciesVector SignalIndicies = it->second; IndiciesVector BZeroIndicies = m_BValueMap[0]; int NumbersOfGradientIndicies = SignalIndicies.size(); typedef typename GradientImagesType::PixelType GradientVectorType; // iterate overall voxels of the gradient image region while( ! git.IsAtEnd() ) { GradientVectorType b = git.Get(); // ODF Vector OdfPixelType odf(0.0); double b0average = 0; const int b0size = BZeroIndicies.size(); for(unsigned int i = 0; i SignalVector(NumbersOfGradientIndicies); if( (b0average != 0) && (b0average >= m_Threshold) ) { for( unsigned int i = 0; i< SignalIndicies.size(); i++ ) { SignalVector[i] = static_cast(b[SignalIndicies[i]]); } // apply threashold an generate ln(-ln(E)) signal // Replace SignalVector with PreNormalized SignalVector S_S0Normalization(SignalVector, b0average); Projection1(SignalVector); DoubleLogarithm(SignalVector); // approximate ODF coeffs vnl_vector coeffs = ( (*m_CoeffReconstructionMatrix) * SignalVector ); coeffs[0] = 1.0/(2.0*sqrt(QBALL_ANAL_RECON_PI)); odf = element_cast(( (*m_ODFSphericalHarmonicBasisMatrix) * coeffs )).data_block(); odf *= (QBALL_ANAL_RECON_PI*4/NODF); } // set ODF to ODF-Image oit.Set( odf ); ++oit; ++git; } MITK_INFO << "One Thread finished reconstruction"; } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::NumericalNShellReconstruction(const OutputImageRegionType& outputRegionForThread) { // vnl_levenberg_marquardt LMOptimizer = new vnl_levenberg_marquardt(); } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::AnalyticalThreeShellReconstruction(const OutputImageRegionType& outputRegionForThread) { // Input Gradient Image and Output ODF Image typedef typename GradientImagesType::PixelType GradientVectorType; typename OutputImageType::Pointer outputImage = static_cast< OutputImageType * >(ProcessObject::GetOutput(0)); typename GradientImagesType::Pointer gradientImagePointer = static_cast< GradientImagesType * >( ProcessObject::GetInput(0) ); // Define Image iterators ImageRegionIterator< OutputImageType > odfOutputImageIterator(outputImage, outputRegionForThread); ImageRegionConstIterator< GradientImagesType > gradientInputImageIterator(gradientImagePointer, outputRegionForThread ); ImageRegionIterator< BZeroImageType > bzeroIterator(m_BZeroImage, outputRegionForThread); ImageRegionIterator< CoefficientImageType > coefficientImageIterator(m_CoefficientImage, outputRegionForThread); // All iterators seht to Begin of the specific OutputRegion coefficientImageIterator.GoToBegin(); bzeroIterator.GoToBegin(); odfOutputImageIterator.GoToBegin(); gradientInputImageIterator.GoToBegin(); // Get Shell Indicies for all non-BZero Gradients // it MUST be a arithmetic progression eg.: 1000, 2000, 3000 BValueMapIteraotr it = m_BValueMap.begin(); it++; // it = b-value = 1000 IndiciesVector Shell1Indiecies = it->second; it++; // it = b-value = 2000 IndiciesVector Shell2Indiecies = it->second; it++; // it = b-value = 3000 IndiciesVector Shell3Indiecies = it->second; IndiciesVector BZeroIndicies = m_BValueMap[0]; if(!m_Interpolation_Flag) { m_MaxDirections = Shell1Indiecies.size(); }// else: m_MaxDirection is set in BeforeThreadedGenerateData // Nx3 Signal Matrix with E(0) = Shell 1, E(1) = Shell 2, E(2) = Shell 3 vnl_vector< double > E1(m_MaxDirections); vnl_vector< double > E2(m_MaxDirections); vnl_vector< double > E3(m_MaxDirections); vnl_vector AlphaValues(m_MaxDirections); vnl_vector BetaValues(m_MaxDirections); vnl_vector LAValues(m_MaxDirections); vnl_vector PValues(m_MaxDirections); vnl_vector DataShell1(Shell1Indiecies.size()); vnl_vector DataShell2(Shell2Indiecies.size()); vnl_vector DataShell3(Shell3Indiecies.size()); vnl_matrix tempInterpolationMatrixShell1,tempInterpolationMatrixShell2,tempInterpolationMatrixShell3; if(m_Interpolation_Flag) { tempInterpolationMatrixShell1 = (*m_TARGET_SH_shell1) * (*m_Interpolation_SHT1_inv); tempInterpolationMatrixShell2 = (*m_TARGET_SH_shell2) * (*m_Interpolation_SHT2_inv); tempInterpolationMatrixShell3 = (*m_TARGET_SH_shell3) * (*m_Interpolation_SHT3_inv); } OdfPixelType odf(0.0); typename CoefficientImageType::PixelType coeffPixel(0.0); double P2,A,B2,B,P,alpha,beta,lambda, ER1, ER2; // iterate overall voxels of the gradient image region while( ! gradientInputImageIterator.IsAtEnd() ) { odf = 0.0; coeffPixel = 0.0; GradientVectorType b = gradientInputImageIterator.Get(); // calculate for each shell the corresponding b0-averages double shell1b0Norm =0; double shell2b0Norm =0; double shell3b0Norm =0; double b0average = 0; const int b0size = BZeroIndicies.size(); if(b0size == 1) { shell1b0Norm = b[BZeroIndicies[0]]; shell2b0Norm = b[BZeroIndicies[0]]; shell3b0Norm = b[BZeroIndicies[0]]; b0average = b[BZeroIndicies[0]]; }else if(b0size % 3 ==0) { for(unsigned int i = 0; i = b0size / 3 && i < (b0size / 3)*2) shell2b0Norm += b[BZeroIndicies[i]]; if(i >= (b0size / 3) * 2) shell3b0Norm += b[BZeroIndicies[i]]; } shell1b0Norm /= (b0size/3); shell2b0Norm /= (b0size/3); shell3b0Norm /= (b0size/3); b0average = (shell1b0Norm + shell2b0Norm+ shell3b0Norm)/3; }else { for(unsigned int i = 0; i = m_Threshold) ) { // Get the Signal-Value for each Shell at each direction (specified in the ShellIndicies Vector .. this direction corresponse to this shell...) /*//fsl fix --------------------------------------------------- for(int i = 0 ; i < Shell1Indiecies.size(); i++) DataShell1[i] = static_cast(b[Shell1Indiecies[i]]); for(int i = 0 ; i < Shell2Indiecies.size(); i++) DataShell2[i] = static_cast(b[Shell2Indiecies[i]]); for(int i = 0 ; i < Shell3Indiecies.size(); i++) DataShell3[i] = static_cast(b[Shell2Indiecies[i]]); // Normalize the Signal: Si/S0 S_S0Normalization(DataShell1, shell1b0Norm); S_S0Normalization(DataShell2, shell2b0Norm); S_S0Normalization(DataShell3, shell2b0Norm); *///fsl fix -------------------------------------------ende-- ///correct version for(int i = 0 ; i < Shell1Indiecies.size(); i++) DataShell1[i] = static_cast(b[Shell1Indiecies[i]]); for(int i = 0 ; i < Shell2Indiecies.size(); i++) DataShell2[i] = static_cast(b[Shell2Indiecies[i]]); for(int i = 0 ; i < Shell3Indiecies.size(); i++) DataShell3[i] = static_cast(b[Shell3Indiecies[i]]); // Normalize the Signal: Si/S0 S_S0Normalization(DataShell1, shell1b0Norm); S_S0Normalization(DataShell2, shell2b0Norm); S_S0Normalization(DataShell3, shell3b0Norm); if(m_Interpolation_Flag) { E1 = tempInterpolationMatrixShell1 * DataShell1; E2 = tempInterpolationMatrixShell2 * DataShell2; E3 = tempInterpolationMatrixShell3 * DataShell3; }else{ E1 = (DataShell1); E2 = (DataShell2); E3 = (DataShell3); } //Implements Eq. [19] and Fig. 4. Projection1(E1); Projection1(E2); Projection1(E3); //inqualities [31]. Taking the lograithm of th first tree inqualities //convert the quadratic inqualities to linear ones. Projection2(E1,E2,E3); for( unsigned int i = 0; i< m_MaxDirections; i++ ) { double e1 = E1.get(i); double e2 = E2.get(i); double e3 = E3.get(i); P2 = e2-e1*e1; A = (e3 -e1*e2) / ( 2* P2); B2 = A * A -(e1 * e3 - e2 * e2) /P2; B = 0; if(B2 > 0) B = sqrt(B2); P = 0; if(P2 > 0) P = sqrt(P2); alpha = A + B; beta = A - B; PValues.put(i, P); AlphaValues.put(i, alpha); BetaValues.put(i, beta); } Projection3(PValues, AlphaValues, BetaValues); for(int i = 0 ; i < m_MaxDirections; i++) { const double fac = (PValues[i] * 2 ) / (AlphaValues[i] - BetaValues[i]); lambda = 0.5 + 0.5 * std::sqrt(1 - fac * fac);; ER1 = std::fabs(lambda * (AlphaValues[i] - BetaValues[i]) + (BetaValues[i] - E1.get(i) )) + std::fabs(lambda * (AlphaValues[i] * AlphaValues[i] - BetaValues[i] * BetaValues[i]) + (BetaValues[i] * BetaValues[i] - E2.get(i) )) + std::fabs(lambda * (AlphaValues[i] * AlphaValues[i] * AlphaValues[i] - BetaValues[i] * BetaValues[i] * BetaValues[i]) + (BetaValues[i] * BetaValues[i] * BetaValues[i] - E3.get(i) )); ER2 = std::fabs((1-lambda) * (AlphaValues[i] - BetaValues[i]) + (BetaValues[i] - E1.get(i) )) + std::fabs((1-lambda) * (AlphaValues[i] * AlphaValues[i] - BetaValues[i] * BetaValues[i]) + (BetaValues[i] * BetaValues[i] - E2.get(i) )) + std::fabs((1-lambda) * (AlphaValues[i] * AlphaValues[i] * AlphaValues[i] - BetaValues[i] * BetaValues[i] * BetaValues[i]) + (BetaValues[i] * BetaValues[i] * BetaValues[i] - E3.get(i))); if(ER1 < ER2) LAValues.put(i, lambda); else LAValues.put(i, 1-lambda); } DoubleLogarithm(AlphaValues); DoubleLogarithm(BetaValues); vnl_vector SignalVector(element_product((LAValues) , (AlphaValues)-(BetaValues)) + (BetaValues)); vnl_vector coeffs((*m_CoeffReconstructionMatrix) *SignalVector ); // the first coeff is a fix value coeffs[0] = 1.0/(2.0*sqrt(QBALL_ANAL_RECON_PI)); coeffPixel = element_cast(coeffs).data_block(); // Cast the Signal-Type from double to float for the ODF-Image odf = element_cast( (*m_ODFSphericalHarmonicBasisMatrix) * coeffs ).data_block(); odf *= ((QBALL_ANAL_RECON_PI*4)/NODF); } // set ODF to ODF-Image coefficientImageIterator.Set(coeffPixel); odfOutputImageIterator.Set( odf ); ++odfOutputImageIterator; ++coefficientImageIterator; ++gradientInputImageIterator; } } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter:: ComputeSphericalHarmonicsBasis(vnl_matrix * QBallReference, vnl_matrix *SHBasisOutput, int LOrder , vnl_matrix* LaplaciaBaltramiOutput, vnl_vector* SHOrderAssociation, vnl_matrix* SHEigenvalues) { // MITK_INFO << *QBallReference; for(unsigned int i=0; i< (*SHBasisOutput).rows(); i++) { for(int k = 0; k <= LOrder; k += 2) { for(int m =- k; m <= k; m++) { int j = ( k * k + k + 2 ) / 2 + m - 1; // Compute SHBasisFunctions if(QBallReference){ double phi = (*QBallReference)(0,i); double th = (*QBallReference)(1,i); (*SHBasisOutput)(i,j) = mitk::sh::Yj(m,k,th,phi); } // Laplacian Baltrami Order Association if(LaplaciaBaltramiOutput) (*LaplaciaBaltramiOutput)(j,j) = k*k*(k + 1)*(k+1); // SHEigenvalues with order Accosiation kj if(SHEigenvalues) (*SHEigenvalues)(j,j) = -k* (k+1); // Order Association if(SHOrderAssociation) (*SHOrderAssociation)[j] = k; } } } } template< class T, class TG, class TO, int L, int NOdfDirections> void DiffusionMultiShellQballReconstructionImageFilter ::ComputeReconstructionMatrix(IndiciesVector const & refVector) { typedef std::auto_ptr< vnl_matrix< double> > MatrixDoublePtr; typedef std::auto_ptr< vnl_vector< int > > VectorIntPtr; typedef std::auto_ptr< vnl_matrix_inverse< double > > InverseMatrixDoublePtr; int numberOfGradientDirections = refVector.size(); if( numberOfGradientDirections < (((L+1)*(L+2))/2) || numberOfGradientDirections < 6 ) { itkExceptionMacro( << "At least (L+1)(L+2)/2 gradient directions for each shell are required; current : " << numberOfGradientDirections ); } CheckDuplicateDiffusionGradients(); const int LOrder = L; int NumberOfCoeffs = (int)(LOrder*LOrder + LOrder + 2.0)/2.0 + LOrder; MITK_INFO << NumberOfCoeffs; MatrixDoublePtr SHBasisMatrix(new vnl_matrix(numberOfGradientDirections,NumberOfCoeffs)); SHBasisMatrix->fill(0.0); VectorIntPtr SHOrderAssociation(new vnl_vector(NumberOfCoeffs)); SHOrderAssociation->fill(0.0); MatrixDoublePtr LaplacianBaltrami(new vnl_matrix(NumberOfCoeffs,NumberOfCoeffs)); LaplacianBaltrami->fill(0.0); MatrixDoublePtr FRTMatrix(new vnl_matrix(NumberOfCoeffs,NumberOfCoeffs)); FRTMatrix->fill(0.0); MatrixDoublePtr SHEigenvalues(new vnl_matrix(NumberOfCoeffs,NumberOfCoeffs)); SHEigenvalues->fill(0.0); MatrixDoublePtr Q(new vnl_matrix(3, numberOfGradientDirections)); // Convert Cartesian to Spherical Coordinates refVector -> Q ComputeSphericalFromCartesian(Q.get(), refVector); // SHBasis-Matrix + LaplacianBaltrami-Matrix + SHOrderAssociationVector ComputeSphericalHarmonicsBasis(Q.get() ,SHBasisMatrix.get() , LOrder , LaplacianBaltrami.get(), SHOrderAssociation.get(), SHEigenvalues.get()); // Compute FunkRadon Transformation Matrix Associated to SHBasis Order lj for(int i=0; i(((SHBasisMatrix->transpose()) * (*SHBasisMatrix)) + (m_Lambda * (*LaplacianBaltrami)))); InverseMatrixDoublePtr pseudo_inv(new vnl_matrix_inverse((*temp))); MatrixDoublePtr inverse(new vnl_matrix(NumberOfCoeffs,NumberOfCoeffs)); (*inverse) = pseudo_inv->inverse(); const double factor = (1.0/(16.0*QBALL_ANAL_RECON_PI*QBALL_ANAL_RECON_PI)); MatrixDoublePtr SignalReonstructionMatrix (new vnl_matrix((*inverse) * (SHBasisMatrix->transpose()))); m_CoeffReconstructionMatrix = new vnl_matrix(( factor * ((*FRTMatrix) * ((*SHEigenvalues) * (*SignalReonstructionMatrix))) )); // SH Basis for ODF-reconstruction vnl_matrix_fixed* U = itk::PointShell >::DistributePointShell(); for(int i=0; i( U->as_matrix() )); m_ODFSphericalHarmonicBasisMatrix = new vnl_matrix(NOdfDirections,NumberOfCoeffs); ComputeSphericalHarmonicsBasis(tempPtr.get(), m_ODFSphericalHarmonicBasisMatrix, LOrder); } template< class T, class TG, class TO, int L, int NOdfDirections> void DiffusionMultiShellQballReconstructionImageFilter ::ComputeSphericalFromCartesian(vnl_matrix * Q, IndiciesVector const & refShell) { for(int i = 0; i < refShell.size(); i++) { double x = m_GradientDirectionContainer->ElementAt(refShell[i]).normalize().get(0); double y = m_GradientDirectionContainer->ElementAt(refShell[i]).normalize().get(1); double z = m_GradientDirectionContainer->ElementAt(refShell[i]).normalize().get(2); double cart[3]; mitk::sh::Cart2Sph(x,y,z,cart); (*Q)(0,i) = cart[0]; (*Q)(1,i) = cart[1]; (*Q)(2,i) = cart[2]; } } template< class T, class TG, class TO, int L, int NODF> bool DiffusionMultiShellQballReconstructionImageFilter ::CheckDuplicateDiffusionGradients() { bool value = false; BValueMapIteraotr mapIterator = m_BValueMap.begin(); mapIterator++; while(mapIterator != m_BValueMap.end()) { std::vector::const_iterator it1 = mapIterator->second.begin(); std::vector::const_iterator it2 = mapIterator->second.begin(); for(; it1 != mapIterator->second.end(); ++it1) { for(; it2 != mapIterator->second.end(); ++it2) { if(m_GradientDirectionContainer->ElementAt(*it1) == m_GradientDirectionContainer->ElementAt(*it2) && it1 != it2) { itkWarningMacro( << "Some of the Diffusion Gradients equal each other. Corresponding image data should be averaged before calling this filter." ); value = true; } } } ++mapIterator; } return value; } template< class T, class TG, class TO, int L, int NODF> std::vector DiffusionMultiShellQballReconstructionImageFilter ::GetAllDirections() { IndiciesVector directioncontainer; BValueMapIteraotr mapIterator = m_BValueMap.begin(); mapIterator++; IndiciesVector shell1 = mapIterator->second; mapIterator++; IndiciesVector shell2 = mapIterator->second; mapIterator++; IndiciesVector shell3 = mapIterator->second; while(shell1.size()>0) { unsigned int wntIndex = shell1.back(); shell1.pop_back(); IndiciesVector::iterator containerIt = directioncontainer.begin(); bool directionExist = false; while(containerIt != directioncontainer.end()) { if (fabs(dot(m_GradientDirectionContainer->ElementAt(*containerIt), m_GradientDirectionContainer->ElementAt(wntIndex))) > 0.9998) { directionExist = true; break; } containerIt++; } if(!directionExist) { directioncontainer.push_back(wntIndex); } } while(shell2.size()>0) { unsigned int wntIndex = shell2.back(); shell2.pop_back(); IndiciesVector::iterator containerIt = directioncontainer.begin(); bool directionExist = false; while(containerIt != directioncontainer.end()) { if (fabs(dot(m_GradientDirectionContainer->ElementAt(*containerIt), m_GradientDirectionContainer->ElementAt(wntIndex))) > 0.9998) { directionExist = true; break; } containerIt++; } if(!directionExist) { directioncontainer.push_back(wntIndex); } } while(shell3.size()>0) { unsigned int wntIndex = shell3.back(); shell3.pop_back(); IndiciesVector::iterator containerIt = directioncontainer.begin(); bool directionExist = false; while(containerIt != directioncontainer.end()) { if (fabs(dot(m_GradientDirectionContainer->ElementAt(*containerIt), m_GradientDirectionContainer->ElementAt(wntIndex))) > 0.9998) { directionExist = true; break; } containerIt++; } if(!directionExist) { directioncontainer.push_back(wntIndex); } } return directioncontainer; } // corresponding directions between shells (e.g. dir1_shell1 vs dir1_shell2) differ more than 1 degree. template< class T, class TG, class TO, int L, int NODF> bool DiffusionMultiShellQballReconstructionImageFilter ::CheckForDifferingShellDirections() { bool interp_flag = false; BValueMapIteraotr mapIterator = m_BValueMap.begin(); mapIterator++; IndiciesVector shell1 = mapIterator->second; mapIterator++; IndiciesVector shell2 = mapIterator->second; mapIterator++; IndiciesVector shell3 = mapIterator->second; for (int i=0; i< shell1.size(); i++) if (fabs(dot(m_GradientDirectionContainer->ElementAt(shell1[i]), m_GradientDirectionContainer->ElementAt(shell2[i]))) <= 0.9998) {interp_flag=true; break;} for (int i=0; i< shell1.size(); i++) if (fabs(dot(m_GradientDirectionContainer->ElementAt(shell1[i]), m_GradientDirectionContainer->ElementAt(shell3[i]))) <= 0.9998) {interp_flag=true; break;} for (int i=0; i< shell1.size(); i++) if (fabs(dot(m_GradientDirectionContainer->ElementAt(shell2[i]), m_GradientDirectionContainer->ElementAt(shell3[i]))) <= 0.9998) {interp_flag=true; break;} return interp_flag; } template< class T, class TG, class TO, int L, int NODF> void DiffusionMultiShellQballReconstructionImageFilter ::PrintSelf(std::ostream& os, Indent indent) const { std::locale C("C"); std::locale originalLocale = os.getloc(); os.imbue(C); Superclass::PrintSelf(os,indent); //os << indent << "OdfReconstructionMatrix: " << m_ReconstructionMatrix << std::endl; if ( m_GradientDirectionContainer ) { os << indent << "GradientDirectionContainer: " << m_GradientDirectionContainer << std::endl; } else { os << indent << "GradientDirectionContainer: (Gradient directions not set)" << std::endl; } os << indent << "NumberOfGradientDirections: " << m_NumberOfGradientDirections << std::endl; os << indent << "NumberOfBaselineImages: " << m_NumberOfBaselineImages << std::endl; os << indent << "Threshold for reference B0 image: " << m_Threshold << std::endl; os << indent << "BValue: " << m_BValue << std::endl; os.imbue( originalLocale ); } } #endif // __itkDiffusionMultiShellQballReconstructionImageFilter_cpp diff --git a/Modules/DiffusionImaging/Reconstruction/itkPointShell.h b/Modules/DiffusionImaging/Reconstruction/itkPointShell.h index 6a37f00bf1..a94fd2dde6 100644 --- a/Modules/DiffusionImaging/Reconstruction/itkPointShell.h +++ b/Modules/DiffusionImaging/Reconstruction/itkPointShell.h @@ -1,38 +1,47 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef __itkPointShell_h__ #define __itkPointShell_h__ #include "mitkQBallImage.h" #include "MitkDiffusionImagingExports.h" namespace itk { // generate by n-fold subdivisions of an icosahedron template class PointShell { public: static TMatrixType *DistributePointShell(); }; + template + class ThreeLayerPointShell + { + public: + static TMatrixTypeshell1 *DistributePointShell1(); + static TMatrixTypeshell2 *DistributePointShell2(); + static TMatrixTypeshell3 *DistributePointShell3(); + }; + } #include "itkPointShell.txx" #endif //__itkPointShell_h__ diff --git a/Modules/DiffusionImaging/Reconstruction/itkPointShell.txx b/Modules/DiffusionImaging/Reconstruction/itkPointShell.txx index f065ecb889..2b028baaaf 100644 --- a/Modules/DiffusionImaging/Reconstruction/itkPointShell.txx +++ b/Modules/DiffusionImaging/Reconstruction/itkPointShell.txx @@ -1,4105 +1,5247 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef __itkPointShell_txx__ #define __itkPointShell_txx__ #include "vnl/vnl_vector_fixed.h" #include "vnl/vnl_matrix_fixed.h" #define _USE_MATH_DEFINES #include namespace itk { - #define DIST_POINTSHELL_PI M_PI +#define DIST_POINTSHELL_PI M_PI - template - TMatrixType * - PointShell - ::DistributePointShell() - { +template +TMatrixType * +PointShell +::DistributePointShell() +{ - vnl_vector_fixed *theta + vnl_vector_fixed *theta = new vnl_vector_fixed(); - vnl_vector_fixed *phi + vnl_vector_fixed *phi = new vnl_vector_fixed(); - double C = sqrt(4*DIST_POINTSHELL_PI); + double C = sqrt(4*DIST_POINTSHELL_PI); - (*phi)(0) = 0.0; - (*phi)(NPoints-1) = 0.0; + (*phi)(0) = 0.0; + (*phi)(NPoints-1) = 0.0; - for(int i=0; i0 && i0 && i *pointshell + vnl_matrix_fixed *pointshell = new vnl_matrix_fixed(); - for(int i=0; i class PointShell<12, vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell() + { + double coords[3*12] = { + 0.250254,0.320072,0.437594, + 0.550563,0.623196,0.975676, + -0.250253,-0.320073,-0.437593, + -0.550563,-0.6231950000000001,-0.975676, + -0.916162,-0.078054,-0.598061, + 0.758025,0.436642,-0.177816, + 0.916161,0.078054,0.598061, + -0.758024,-0.436643,0.177817, + -0.313083,-0.944171,0.671442, + -0.349682,0.648821,-0.128204, + 0.313082,0.944172,-0.671442, + 0.349683,-0.648822,0.128204 }; + + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); return pointshell; } +}; - // generate by n-fold subdivisions of an icosahedron - // 1 - 12 - // 2 - 42 - // 3 - 92 - // 4 - 162 - // 5 - 252 - // 6 - 362 - // 7 - 492 - // 8 - 642 - // 9 - 812 - // 10 - 1002 +template<> class PointShell<42, vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell() + { + double coords[3*42] = { + 0.9756767549555488,0.9397937974509784,0.6231965669156312, + 0.8971014254962764,0.6899186612252972,0.5505632701289798, + 0.4375940376503738,0.06907711216819172,-0.3200730131503601, + 0.6235168560971455,0.1781713819192711,0.3200724178002418, + 0.7616224484252742,0.5117469206751248,0.2502538949373057, + 0.4043068999720243,0.7205836671095894,0.8306996157029517, + -0.4375932291383154,-0.06907715072573903,0.06640211724156461, + -0.6231952788307174,-0.2192092047974508,-0.1781713502362079, + 0.3352293490184233,-0.2502532651867688,-0.4043060780204903, + 0.1765178736510398,-0.975676581463901,-0.9397935597648752, + -0.8306992108488227,-0.6235158879179115,0.21921067448898, + -0.7616223457476226,-0.3352294641675141,-0.7205834943870382, + -0.5117470172320778,-0.06640153973221416,-0.5505634949474448, + -0.176517304179968,-0.6899183532182501,-0.8971016370404784, + -0.1778161375899129,0.1521341729788544,0.4366423972091847, + 0.3410385404813853,0.7022080829625521,0.7580253719184177, + -0.5980610514568759,-0.3056524524744078,0.07805400320688782, + -0.09487972868743588,0.3025309778153461,-0.07805410188638827, + -0.1503967869358663,0.3996773221825281,-0.9161616153729887, + -0.8900379255247358,-0.6430242175142256,-0.4560492515462431, + 0.5980613131647216,0.3056526230838691,0.797087559189558, + -0.4366431953633789,-0.7951587738972527,-0.3025315118038733, + -0.5843857415998933,0.9161619708326186,0.8900381161951118, + 0.9840623116657442,0.1778171059718252,-0.1521342296531137, + 0.4560499397602033,0.09487917246041,0.7951586652134927, + 0.1503972383762518,0.584385354546882,0.6430245879023526, + -0.399676350745083,-0.7970870947583816,-0.7580246814516085, + -0.9840624137666333,-0.7022083677250226,-0.3410374453295617, + -0.1282040992012935,0.3060111300013609,0.6488215902264565, + -0.2808945465452747,0.1758296024995542,-0.3496821715684524, + 0.6714420577705413,0.9496341036793501,0.9441720387917811, + 0.7760312926982584,0.9363385958760152,-0.9441722324566724, + -0.6303269409870232,-0.7605084662990487,-0.3130828685601688, + 0.2106381298878163,-0.2593820240207756,0.3193074202631062, + -0.671442351589465,-0.9496340459616871,-0.6002017842451572, + -0.648822290296783,-0.5653935344751363,-0.9363384293729856, + -0.7389956620788968,0.3130823317650696,-0.2106389019045293, + -0.02151295053653907,0.1282040764044601,-0.3060118317848469, + -0.3193074905789999,-0.7760321386045594,0.5653931175085022, + 0.6303269573377657,0.7389959159190775,0.2593815856416469, + 0.7605089118538748,0.6002024649156598,0.3496833143594963, + 0.02151295276860444,-0.175829673802738,0.2808952005684321 }; - template<> class PointShell<12, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() - { - double coords[3*12] = { - 0.250254,0.320072,0.437594, - 0.550563,0.623196,0.975676, - -0.250253,-0.320073,-0.437593, - -0.550563,-0.6231950000000001,-0.975676, - -0.916162,-0.078054,-0.598061, - 0.758025,0.436642,-0.177816, - 0.916161,0.078054,0.598061, - -0.758024,-0.436643,0.177817, - -0.313083,-0.944171,0.671442, - -0.349682,0.648821,-0.128204, - 0.313082,0.944172,-0.671442, - 0.349683,-0.648822,0.128204 }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + return pointshell; + } +}; - return pointshell; - } - }; +template<> class PointShell<92, vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell() + { + double coords[3*92] = { + 0.9756767549555487,0.9881046683022421,0.8528238339140162, + 0.6231965669156312,0.9602286065935876,0.9016229543668698, + 0.68966672282401,0.7970712198937139,0.6617902410567804, + 0.5505632701289798,0.4375940376503739,0.2130515669413184, + -0.07773888316805401,-0.3200730131503601,0.575075565563677, + 0.3107083252171692,-0.006505365777837463,0.6463093264667951, + 0.3555189519163455,0.3200724178002418,0.6201479032959075, + 0.8717669667532965,0.4569904905821254,0.7744719807282636, + 0.5454521871592555,0.2502538949373057,0.3600408236839538, + 0.4319414682718342,0.5665551499276381,0.697797754038698, + 0.7103565350090897,0.8449704612165639,0.9168712118355732, + -0.4375932291383153,-0.213051272338593,0.07773856031405026, + -0.1245894223683107,0.181648017057727,0.2546621526726748, + -0.6231952788307172,-0.3823142165271753,-0.04708691012811009, + -0.3555183995893311,-0.02217694060430831,0.3149362814931866, + 0.006504983859799645,0.3417324928044827,-0.2502532651867688, + -0.3600400745299253,-0.4319406005716204,0.01921174674137865, + -0.05758606025521316,0.3265627679363224,-0.9756765814639009, + -0.988104613901425,-0.8528232434185344,-0.9168708930751739, + -0.854235225343551,-0.6463082287051728,-0.7103560109842373, + -0.5750746905699001,0.3823157740702657,0.0470881327099307, + 0.3873829237054168,-0.6201479767677171,-0.8717667933239607, + -0.3417327749428254,-0.6485010946606566,-0.8449702640289916, + -0.3149361858566655,-0.5665549223826651,0.854235631268382, + -0.4569906864326022,-0.1816479322770386,0.1245901828483064, + 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-0.982438609905361,-0.649602216294724,-0.8243817913354027, + -0.5261115978506249,-0.6488222902967828,-0.6181925269683732, + -0.4893366483035592,-0.8604026705465684,-0.7995410210009178, + -0.6026908960383706,-0.9737572051250643,-0.8449013283633929, + 0.3130823317650696,-0.01737758434298078,-0.3952353653550799, + 0.1061130743462423,-0.2970021727032599,-0.1482539922220807, + 0.1282040764044601,-0.1506074987015245,-0.4488280788164578, + -0.159288972427813,-0.5000332157715695,-0.7557300072673856, + -0.4661910177108468,-0.7644115292814133,0.6181920323103048, + 0.4893362367199527,0.2568082513095248,0.7739454978673308, + 0.4607793683387657,0.8449014608184471,0.5811577408091089, + 0.2185687785328751,0.6026910636921159,0.2895245326714229, + 0.5000325428335932,0.8589483198537152,0.8243822455102904, + 0.6496025629973337,0.6307853921801013,0.5261125320735169, + 0.3496833143594963,-0.5811577408091089,0.2970021583546204, + -0.1061134148983228,0.1482544392795429,-0.9498619694604108, + -0.2568086311939767,-0.3638250562458945,0.01939866440958929, + -0.0965434988571485,-0.07170210104888378,0.2326162031595532, + 0.3176193294845107,0.7995412648414353,0.5965106290979496 }; - template<> class PointShell<42, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() - { - double coords[3*42] = { - 0.9756767549555488,0.9397937974509784,0.6231965669156312, - 0.8971014254962764,0.6899186612252972,0.5505632701289798, - 0.4375940376503738,0.06907711216819172,-0.3200730131503601, - 0.6235168560971455,0.1781713819192711,0.3200724178002418, - 0.7616224484252742,0.5117469206751248,0.2502538949373057, - 0.4043068999720243,0.7205836671095894,0.8306996157029517, - -0.4375932291383154,-0.06907715072573903,0.06640211724156461, - -0.6231952788307174,-0.2192092047974508,-0.1781713502362079, - 0.3352293490184233,-0.2502532651867688,-0.4043060780204903, - 0.1765178736510398,-0.975676581463901,-0.9397935597648752, - -0.8306992108488227,-0.6235158879179115,0.21921067448898, - -0.7616223457476226,-0.3352294641675141,-0.7205834943870382, - -0.5117470172320778,-0.06640153973221416,-0.5505634949474448, - -0.176517304179968,-0.6899183532182501,-0.8971016370404784, - -0.1778161375899129,0.1521341729788544,0.4366423972091847, - 0.3410385404813853,0.7022080829625521,0.7580253719184177, - -0.5980610514568759,-0.3056524524744078,0.07805400320688782, - -0.09487972868743588,0.3025309778153461,-0.07805410188638827, - -0.1503967869358663,0.3996773221825281,-0.9161616153729887, - -0.8900379255247358,-0.6430242175142256,-0.4560492515462431, - 0.5980613131647216,0.3056526230838691,0.797087559189558, - -0.4366431953633789,-0.7951587738972527,-0.3025315118038733, - -0.5843857415998933,0.9161619708326186,0.8900381161951118, - 0.9840623116657442,0.1778171059718252,-0.1521342296531137, - 0.4560499397602033,0.09487917246041,0.7951586652134927, - 0.1503972383762518,0.584385354546882,0.6430245879023526, - 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vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + return pointshell; + } +}; + + +template<> class PointShell<162, vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell() + { + double coords[3*162] = { + 0.9756767549555488,0.9968737649581846,0.9397937974509784, + 0.7989268505692991,0.6231965669156312,0.9764792677814802, + 0.9657129396229355,0.8567905682573015,0.679558714000995, + 0.8971014254962764,0.8343457228904876,0.6899186612252972, + 0.7377425905504456,0.6387690340353133,0.5505632701289798, + 0.4375940376503738,0.2787444080680243,0.06907711216819172, + -0.1467487371786262,-0.3200730131503601,0.5436064763029955, + 0.3641181930198064,0.1299861910861632,-0.09463328683104604, + 0.6235168560971455,0.421472539809791,0.1781713819192711, + 0.6478378002177454,0.4350913076613168,0.3200724178002418, + 0.543583002477908,0.7616224484252742,0.9117594243665534, + 0.4242146396073646,0.6694499319211135,0.8720427891122669, + 0.5117469206751248,0.7406754453578036,0.5536544075493044, + 0.2502538949373057,0.3336803609057232,0.4043068999720243, + 0.438887490788423,0.4847692553550146,0.5913899314506929, + 0.6492812914734455,0.6425800233106177,0.7205836671095894, + 0.8155579470101821,0.8306996157029517,0.8921547074343706, + 0.9447583574027534,-0.4375932291383154,-0.278743955138478, + -0.06907715072573903,0.1467483093137361,-0.2140239599986307, + -0.001406336898152031,0.2327251986251803,0.06640211724156461, + 0.3039508137298482,0.3409081262151013,-0.6231952788307174, + -0.4546947222788382,-0.2192092047974508,0.03581973661208818, + -0.4350905112236564,-0.2089153242611869,0.0609953219830862, + 0.3006812043050254,-0.1781713502362079,0.08257031568712175, + 0.3352293490184233,0.09463277722176672,0.3398901915912972, + -0.2502532651867688,-0.3336796480610522,-0.4043060780204903, + -0.4388866188864613,-0.05621340666038893,-0.1197552832780665, + 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0.9129980537560551,0.9518770467134829,0.9449458910860361, + 0.2573950079345842,0.363089267383967,0.4717819390919956, + 0.5783933464143868,0.6773888186481814,0.7640503132419058, + 0.835538996354342,0.8912340245126464,0.2942468056901541, + 0.403998910419839,0.5147136234231619,0.62060207699311, + 0.7160073275453937,0.7967976318501995,0.8611864392751584, + 0.3298234714814622,0.4413854454351217,0.5513863234589741, + 0.6537700563672823,0.7433259842576552,0.8169373645440049, + 0.3620182543235557,0.4726965405256068,0.5791764634315589, + 0.6757048258462731,0.7580000771779366,0.3888887347419664, + 0.4960228623929952,0.5966697046150125,0.685875099677583, + 0.4091542831822379,0.5106167801856609,0.6039998362037971, + 0.422484479771868,0.5169744155067602,0.4294387727293252 }; + + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); + + return pointshell; + } +}; + + +// ThreeLayerPointShell using a staggered-distribution +#include + +template +TMatrixTypeshell1 * +ThreeLayerPointShell< NpointsShell1, NpointsShell2, NpointsShell3, TMatrixTypeshell1, TMatrixTypeshell2, TMatrixTypeshell3> +::DistributePointShell1() +{ + itkGenericExceptionMacro(<<"This type of PointShell is not Supported and should not be used!"); + return 0; +} + +template +TMatrixTypeshell2 * +ThreeLayerPointShell< NpointsShell1, NpointsShell2, NpointsShell3, TMatrixTypeshell1, TMatrixTypeshell2, TMatrixTypeshell3> +::DistributePointShell2() +{ +itkGenericExceptionMacro(<<"This type of PointShell is not Supported and should not be used!"); +return 0; +} + +template +TMatrixTypeshell3 * +ThreeLayerPointShell< NpointsShell1, NpointsShell2, NpointsShell3, TMatrixTypeshell1, TMatrixTypeshell2, TMatrixTypeshell3> +::DistributePointShell3() +{ + itkGenericExceptionMacro(<<"This type of PointShell is not Supported and should not be used!"); + return 0; +} + + + +//Distributed Pointshell 7 - 16 - 22 + +template<> class ThreeLayerPointShell<7,16,22, vnl_matrix_fixed,vnl_matrix_fixed,vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell1() + { + double coords[3*7] = { + 0.8134386897688890,-0.4341253640420510,0.3871080808797820, + -0.4587290424636170,-0.8386718051774130,-0.2935937138306440, + 0.9664216428893120,0.2069240694656700,-0.1523536597226610, + 0.2351246687899070,-0.9681943247699460,0.0855344352275928, + 0.3639220075873960,0.5047564346894090,-0.7828037519284090, + 0.5319989685716170,-0.4881652317616310,-0.6918611160759410, + 0.3581867553682760,0.1086899080235520,0.9273018668009770 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); + + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 7; c++) { - double coords[3*92] = { - 0.9756767549555487,0.9881046683022421,0.8528238339140162, - 0.6231965669156312,0.9602286065935876,0.9016229543668698, - 0.68966672282401,0.7970712198937139,0.6617902410567804, - 0.5505632701289798,0.4375940376503739,0.2130515669413184, - -0.07773888316805401,-0.3200730131503601,0.575075565563677, - 0.3107083252171692,-0.006505365777837463,0.6463093264667951, - 0.3555189519163455,0.3200724178002418,0.6201479032959075, - 0.8717669667532965,0.4569904905821254,0.7744719807282636, - 0.5454521871592555,0.2502538949373057,0.3600408236839538, - 0.4319414682718342,0.5665551499276381,0.697797754038698, - 0.7103565350090897,0.8449704612165639,0.9168712118355732, - -0.4375932291383153,-0.213051272338593,0.07773856031405026, - -0.1245894223683107,0.181648017057727,0.2546621526726748, - -0.6231952788307172,-0.3823142165271753,-0.04708691012811009, - -0.3555183995893311,-0.02217694060430831,0.3149362814931866, - 0.006504983859799645,0.3417324928044827,-0.2502532651867688, - -0.3600400745299253,-0.4319406005716204,0.01921174674137865, - -0.05758606025521316,0.3265627679363224,-0.9756765814639009, - -0.988104613901425,-0.8528232434185344,-0.9168708930751739, - -0.854235225343551,-0.6463082287051728,-0.7103560109842373, - -0.5750746905699001,0.3823157740702657,0.0470881327099307, - 0.3873829237054168,-0.6201479767677171,-0.8717667933239607, - -0.3417327749428254,-0.6485010946606566,-0.8449702640289916, - -0.3149361858566655,-0.5665549223826651,0.854235631268382, - -0.4569906864326022,-0.1816479322770386,0.1245901828483064, - -0.5454522916908328,-0.2546618495309371,-0.5505634949474448, - 0.6485010946606566,0.05758689641252078,-0.01921097131735245, - -0.3265625234832059,-0.3107079508004592,-0.3873820250532686, - -0.6896660583043277,-0.6617902107749167,-0.6977972953381247, - -0.9016230372124288,-0.9602286916122059,-0.7970714969272577, - 0.02217737847260294,-0.774471897882643,-0.1778161375899129, - 0.03109142233089637,0.2669187829195654,0.4366423972091846, - 0.1544374088220477,0.4265382311030135,0.6260922126282031, - 0.5136107375104821,0.7494380454402638,0.7580253719184178, - -0.5980610514568761,-0.4291113361140411,-0.1696203080333493, - 0.07805400320688781,-0.2914862882507431,-0.03496909012717316, - 0.2274959035287995,0.1056298518860434,0.3651211825280409, - -0.07805410188638827,-0.1281592432697842,-0.1664476243728032, - 0.2310143008479173,0.2106389321639752,0.5518992169467314, - -0.9161616153729886,-0.9327747060225072,-0.8106886470978539, - -0.771485918473268,-0.7097589298055721,-0.5273136421678301, - -0.4881111164997092,-0.3660248731570757,0.5980613131647216, - 0.4291115157626469,0.1696204410073287,0.7499962909367706, - 0.5360957563846484,0.8113900261915854,-0.4366431953633788, - -0.6867851479477911,-0.8708228680516066,-0.365121777041269, - -0.6002019152270697,-0.7331976694123558,-0.2274963530521035, - -0.4115345048612673,0.9161619708326186,0.9327749805257903, - 0.8106887957474585,0.9941684586829005,0.9531387910864955, - 0.9334760373935599,0.1778171059718252,-0.03109104889813258, - -0.266919222145987,0.3660256667153609,0.1422988506889488, - -0.1056306282458797,0.5273142067726671,0.2914860445503094, - 0.6867847261588661,0.8708230332223915,0.8854287054759334, - 0.1281594836202007,0.1664482855753907,0.4115339986401247, - 0.4916319868779721,0.4881116080953447,0.7331975726799166, - 0.7714862700692517,-0.1422987785572308,-0.2310136280273065, - -0.5360950867028047,-0.749995864312011,-0.551898166785698, - -0.8113895155772442,-0.7580246814516086,-0.4916319868779721, - -0.9531387450388693,-0.9941684373181742,-0.9334760519103793, - 0.03496867572798409,-0.885428988462601,-0.6260926899993671, - -0.7494380619781833,0.7097593165624652,-0.4265380492676017, - -0.154436271103469,-0.513609764630649,0.6002015742230613, - -0.2106379566061765,-0.1282040992012935,0.1506070646973712, - 0.448827218017063,0.6488215902264565,-0.232615798766268, - 0.07170206110196441,0.3638246180723771,-0.3176184514965804, - -0.01939827024983318,-0.3496821715684524,0.6714420577705416, - 0.8777656242085763,0.9824386073167399,0.9441720387917811, - 0.7644107780855932,0.9498618317294465,0.9737573075945113, - 0.7557291769626011,0.8604026946131842,-0.9441722324566724, - -0.7739455965390631,-0.4607792790679794,-0.8589482430980673, - -0.5965101770495287,-0.6307845637432553,-0.3130828685601688, - 0.01737679733452725,0.3952347219739472,-0.2895250242862085, - 0.09654302677976184,0.4661908578614318,-0.2185691140597737, - 0.1592889611288683,-0.671442351589465,-0.8777656078901646, - -0.982438609905361,-0.649602216294724,-0.8243817913354027, - -0.5261115978506249,-0.6488222902967828,-0.6181925269683732, - -0.4893366483035592,-0.8604026705465684,-0.7995410210009178, - -0.6026908960383706,-0.9737572051250643,-0.8449013283633929, - 0.3130823317650696,-0.01737758434298078,-0.3952353653550799, - 0.1061130743462423,-0.2970021727032599,-0.1482539922220807, - 0.1282040764044601,-0.1506074987015245,-0.4488280788164578, - -0.159288972427813,-0.5000332157715695,-0.7557300072673856, - -0.4661910177108468,-0.7644115292814133,0.6181920323103048, - 0.4893362367199527,0.2568082513095248,0.7739454978673308, - 0.4607793683387657,0.8449014608184471,0.5811577408091089, - 0.2185687785328751,0.6026910636921159,0.2895245326714229, - 0.5000325428335932,0.8589483198537152,0.8243822455102904, - 0.6496025629973337,0.6307853921801013,0.5261125320735169, - 0.3496833143594963,-0.5811577408091089,0.2970021583546204, - -0.1061134148983228,0.1482544392795429,-0.9498619694604108, - -0.2568086311939767,-0.3638250562458945,0.01939866440958929, - -0.0965434988571485,-0.07170210104888378,0.2326162031595532, - 0.3176193294845107,0.7995412648414353,0.5965106290979496 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + return pointshell; + } - return pointshell; - } - }; + static vnl_matrix_fixed* DistributePointShell2() + { + double coords[3*16] = { + -0.5452474978820280,0.0761974966412968,0.8348048320170320, + 0.2927980757498900,-0.6773379396203400,0.6748945120446840, + -0.1417004162163040,-0.9633970491958960,0.2275678308653590, + -0.6140671213404080,0.1662941114081500,-0.7715360257302810, + -0.7535977994952050,0.5644302557976330,0.3369107343736630, + 0.6046201505721580,-0.7556729189381400,0.2517794930204040, + -0.5761191698601790,-0.6394532899960390,0.5091033215692650, + -0.8771756234198420,-0.0996725024517006,0.4697108876032420, + 0.1777092608486050,-0.9423569168215250,-0.2835187117762620, + -0.9768429239415920,0.1642087829444060,-0.1371618662353210, + -0.1487223091187880,0.6561163072920720,0.7398601665691900, + 0.8263922468011810,0.2709995685589460,0.4935940520992520, + 0.0308686015665059,0.1530129849183750,0.9877419480227090, + 0.4225700117384330,0.6462523317724860,0.6354467002495210, + 0.7837589636894810,0.6201599634850410,0.0335187488821074, + 0.0539036789368123,0.3663544585938050,-0.9289126999161520 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 16; c++) + { + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } + return pointshell; + } + + static vnl_matrix_fixed* DistributePointShell3() + { + double coords[3*22] = { + -0.8173635684245140,-0.4833486694613540,0.3135137329404920, + -0.2868452120883920,-0.8216012153929990,0.4926370541957950, + -0.7664861123034300,0.2467518351336330,0.5929692837779680, + -0.6473847770633690,-0.2749696442612980,0.7108337676007140, + -0.8434413337089970,0.5359848183688930,-0.0364278886191929, + -0.6982955004575730,-0.6008181795242910,-0.3891026974897790, + -0.1840600867015900,-0.4748774851820570,-0.8605889021772050, + -0.5838330320870200,0.5227863025561340,-0.6211549504783510, + 0.2399013062530760,-0.8837050331449780,0.4018865233524250, + 0.2572284397529420,0.1068009420516400,-0.9604306786849050, + 0.0228576846453402,0.6541700548957510,-0.7560020274644400, + 0.2865351008629760,-0.2558878809381770,0.9232654159895800, + -0.9589554732993380,0.1841748711215180,0.2156015238272050, + -0.1416546797498710,-0.9826949020935590,-0.1193510833813020, + 0.5319624136210260,0.8404508833828820,-0.1032390580905500, + -0.9539866018255820,-0.2464051857069770,-0.1708626582784740, + -0.5967074337720730,-0.2735711735415940,-0.7543865398376490, + -0.8579620414436700,0.0965216321209641,-0.5045638809650520, + 0.4190874972849550,-0.7580966160880540,-0.4996550713194790, + -0.1112620377459570,-0.8350080959462270,-0.5388712635322760, + 0.2732684357685670,-0.3457098692283190,-0.8976686740277500, + -0.5333383595673660,0.8405849409324210,0.0946950436486956 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(); - template<> class PointShell<162, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 22; c++) { - double coords[3*162] = { - 0.9756767549555488,0.9968737649581846,0.9397937974509784, - 0.7989268505692991,0.6231965669156312,0.9764792677814802, - 0.9657129396229355,0.8567905682573015,0.679558714000995, - 0.8971014254962764,0.8343457228904876,0.6899186612252972, - 0.7377425905504456,0.6387690340353133,0.5505632701289798, - 0.4375940376503738,0.2787444080680243,0.06907711216819172, - -0.1467487371786262,-0.3200730131503601,0.5436064763029955, - 0.3641181930198064,0.1299861910861632,-0.09463328683104604, - 0.6235168560971455,0.421472539809791,0.1781713819192711, - 0.6478378002177454,0.4350913076613168,0.3200724178002418, - 0.543583002477908,0.7616224484252742,0.9117594243665534, - 0.4242146396073646,0.6694499319211135,0.8720427891122669, - 0.5117469206751248,0.7406754453578036,0.5536544075493044, - 0.2502538949373057,0.3336803609057232,0.4043068999720243, - 0.438887490788423,0.4847692553550146,0.5913899314506929, - 0.6492812914734455,0.6425800233106177,0.7205836671095894, - 0.8155579470101821,0.8306996157029517,0.8921547074343706, - 0.9447583574027534,-0.4375932291383154,-0.278743955138478, - -0.06907715072573903,0.1467483093137361,-0.2140239599986307, - -0.001406336898152031,0.2327251986251803,0.06640211724156461, - 0.3039508137298482,0.3409081262151013,-0.6231952788307174, - -0.4546947222788382,-0.2192092047974508,0.03581973661208818, - -0.4350905112236564,-0.2089153242611869,0.0609953219830862, - 0.3006812043050254,-0.1781713502362079,0.08257031568712175, - 0.3352293490184233,0.09463277722176672,0.3398901915912972, - -0.2502532651867688,-0.3336796480610522,-0.4043060780204903, - -0.4388866188864613,-0.05621340666038893,-0.1197552832780665, - -0.1776465335448071,0.1765178736510398,0.1277105869872963, - 0.3935116760630417,-0.975676581463901,-0.9968737272214637, - -0.9397935597648752,-0.7989260596435309,-0.9447580743829742, - -0.9308031701048347,-0.8218804228775519,-0.6478366382006043, - -0.8306992108488227,-0.7645261844287355,-0.6235158879179115, - -0.6425794288509028,-0.543605629081954,0.4546962564744617, - 0.21921067448898,-0.03581866880653414,0.4779576265881325, - 0.2080468003445843,0.4555126388719097,-0.543583197615373, - -0.7616223457476226,-0.9117592443356049,-0.3398905505309818, - -0.5766491384642831,-0.7792417673233771,-0.8921544952781482, - -0.3352294641675141,-0.5550737397870624,-0.7205834943870382, - -0.3006809838192767,-0.4847689570296102,0.8218810203164033, - 0.9308033931946534,0.7645267056644409,-0.4242149221746557, - -0.2327253235991419,0.00140664545831139,0.2140247669633664, - -0.5117470172320778,-0.3039507303469009,-0.06640153973221416, - -0.5536545418185335,-0.3409079709201472,-0.5505634949474448, - 0.7792418677670352,0.5766490604842006,0.5550737528785307, - 0.1776474313398276,0.1197561650892531,0.05621421006516834, - -0.1277100030888262,-0.176517304179968,-0.3935115910448358, - -0.1299862309792015,-0.3641176806190365,-0.4214718858755578, - -0.2080457563809749,-0.477956563666828,-0.6795578679273953, - -0.4555121490743896,-0.6899183532182501,-0.6387691005409376, - -0.6492806993353901,-0.5913894852863821,-0.8155575864896008, - -0.8567903368462096,-0.9657130735429578,-0.9764792804081987, - -0.834345897568434,-0.8971016370404784,-0.7377428728490714, - -0.06099477310985241,0.2089161290281741,-0.08257033948198818, - -0.8720426859708773,-0.6694498734011487,-0.740675476302381, - -0.1778161375899129,-0.02718233037986957,0.1521341729788544, - 0.3178872248051531,0.4366423972091847,0.06305939500089614, - 0.2592762165236786,0.4491542846588709,0.5806638189836385, - 0.3410385404813853,0.5484671467389891,0.7022080829625521, - 0.5886123721388867,0.761147081998915,0.7580253719184177, - -0.5980610514568759,-0.4818747107897384,-0.3056524524744078, - -0.102179801407443,0.07805400320688782,-0.3811861908796716, - -0.2105722545208477,-0.001641189844283069,0.1883562467232593, - -0.09487972868743588,0.1091686599118738,0.3025309778153461, - 0.1998858588754617,0.3897335832229792,-0.07805410188638827, - -0.1156801299839266,-0.1503967869358663,-0.1717048170733874, - 0.1470965334761953,0.1310545667952879,0.100226360425432, - 0.3996773221825281,0.3894173756029716,0.6166247865338805, - -0.9161616153729887,-0.93968222548459,-0.8900379255247358, - -0.7610423024299814,-0.8216809647863927,-0.8059784419089511, - -0.7076799521032789,-0.5537209611836944,-0.6430242175142256, - -0.577817181345379,-0.4560492515462431,-0.4070385900414059, - -0.3177184789930138,0.5980613131647216,0.4818748986235024, - 0.3056526230838691,0.1021798945147061,0.7166389355513205, - 0.5797448495418049,0.3708138719979267,0.797087559189558, - 0.6291765311790336,0.8064720598658887,-0.4366431953633789, - -0.6250679008877252,-0.7951587738972527,-0.894357332660672, - -0.3897342152274581,-0.5770900179397438,-0.7252694054566711, - -0.7936687210308288,-0.3025315118038733,-0.4662800296194353, - -0.5843857415998933,-0.1883566309643827,-0.3230016809603438, - 0.9161619708326186,0.9396825386256142,0.8900381161951118, - 0.7610424573388179,0.98459889389352,0.985272860446651, - 0.8869743499570832,0.9840623116657442,0.9364058649128151, - 0.8957919700911449,0.1778171059718252,0.02718289859111821, - -0.1521342296531137,-0.3178878068603045,0.31771932061924, - 0.1597779786826127,-0.03010074909289372,-0.1998866892639353, - 0.4560499397602033,0.2896405921772683,0.09487917246041, - 0.5537214556082512,0.3811861035860583,0.6250673427588886, - 0.7951586652134927,0.8943575917970892,0.7872122199392447, - 0.9353918603084618,0.8865248509843126,0.1156802730367007, - 0.1503972383762518,0.1717055726654157,0.3230012075937738, - 0.3862979863651042,0.4171265008378126,0.4070391829394841, - 0.584385354546882,0.6452876111171104,0.6430245879023526, - 0.7936687790069655,0.8216813253645509,0.03010042800399446, - -0.159777601870924,-0.2896404384341761,-0.1470960585711635, - -0.3708132697350703,-0.5797443521912047,-0.7166385361913998, - -0.399676350745083,-0.6291757405426562,-0.7970870947583816, - -0.6166237809711579,-0.8064715143730887,-0.7580246814516085, - -0.417126245587897,-0.3862981411371962,-0.6452875761129986, - -0.8869742038831786,-0.9852727972566903,-0.9845987728990332, - -0.9364058061885231,-0.9840624137666333,-0.8957918541675716, - 0.001640881330767951,0.2105720065923513,-0.109169268647464, - -0.9353919526972201,-0.7872126141915534,-0.5806643774075225, - -0.8865251005609038,-0.7022083677250226,-0.7611469342493191, - 0.707680317140174,0.8059787882713181,0.577817672809353, - -0.4491544873380491,-0.2592757174096171,-0.063058272648828, - -0.5484668466671915,-0.3410374453295617,-0.5886114742048517, - 0.7252693007743299,0.5770896067011005,0.4662795459560942, - -0.1002253860034311,-0.1310538163159151,-0.3894163023521484, - -0.1282040992012935,0.07418771901881034,0.3060111300013609, - 0.5105522497698926,0.6488215902264565,-0.2061837828129686, - 0.01320461245153456,0.2533186742384155,0.4483631157317138, - -0.2808945465452747,-0.05523589088936585,0.1758296024995542, - -0.3305621657917769,-0.1123798946526014,-0.3496821715684524, - 0.6714420577705413,0.8307215647087252,0.9496341036793501, - 0.983882155708098,0.9441720387917811,0.7477894668983293, - 0.9072360592139173,0.9915144459980433,0.9775308002021622, - 0.7760312926982584,0.9002461340540874,0.9363385958760152, - 0.7350862725086435,0.8116669810370153,-0.9441722324566724, - -0.8313456723553714,-0.6303269409870232,-0.3731115220313701, - -0.8935348618728204,-0.7312055040636086,-0.4790574606800003, - -0.7605084662990487,-0.5474979380988695,-0.5596790773588694, - -0.3130828685601688,-0.07519795113003093,0.2106381298878163, - 0.4776948653078811,-0.299731815412124,-0.02562616156907596, - 0.2786088475509629,0.5296074119458033,-0.2593820240207756, - 0.03150460300683353,0.3193074202631062,-0.1959070295313489, - 0.08053951964108649,-0.671442351589465,-0.8307216077305004, - -0.9496340459616871,-0.9838822098556939,-0.6637939293172054, - -0.8147968652653733,-0.8990751104656249,-0.6002017842451572, - -0.7153675946298389,-0.4830988161196208,-0.648822290296783, - -0.6344626299567083,-0.5653935344751363,-0.4459169294668335, - -0.8116671044980045,-0.7895071237697285,-0.6857578728711079, - -0.5288485365725882,-0.9363384293729856,-0.8807752703984302, - -0.7389956620788968,-0.9775307754986758,-0.8832579304805722, - 0.3130823317650696,0.07519720122433592,-0.2106389019045293, - -0.4776954195825031,0.1655447705464922,-0.1220494268493898, - -0.4262841911656161,-0.02151295053653907,-0.3268548028226648, - -0.2066526242811376,0.1282040764044601,-0.07418801789892716, - -0.3060118317848469,-0.51055312502423,-0.08053951945115613, - -0.3287498381001709,-0.5688642328312289,-0.7350870708018485, - -0.3193074905789999,-0.5758541835274278,-0.7760321386045594, - -0.5296076162752261,-0.7477901272839138,0.6344620803203709, - 0.5653931175085022,0.4459164955009389,0.389683753785766, - 0.2859346018498913,0.08112906023855893,0.831345524857385, - 0.6303269573377657,0.3731116142445962,0.8832579654623612, - 0.7198955735651289,0.467747528435525,0.1959067638111305, - 0.7389959159190775,0.5248781214125594,0.2593815856416469, - 0.5288485749239231,0.2997313094215869,0.5688633866559212, - 0.3287493895928871,0.5758535688432742,0.8935348059013593, - 0.8990753265127792,0.8147972186077681,0.6637941002839092, - 0.7605089118538748,0.7153683254339585,0.6002024649156598, - 0.5596800524090022,0.4830998363360157,0.3496833143594963, - -0.4677475887278177,-0.7198955529773995,-0.5248781506021705, - 0.4262841209617862,0.1220490717256491,-0.165545217365127, - 0.326855199205205,0.02151295276860444,0.2066532886754674, - -0.9915144412787341,-0.9072363224101446,-0.9002463663906001, - -0.2859350592025221,-0.3896842610441149,-0.4483636748755489, - -0.0811290830782055,-0.175829673802738,0.1123805173372347, - -0.2786093002807504,0.02562556437243592,-0.03150492197167008, - -0.253319097564816,-0.01320461850800903,0.2061840662709727, - 0.05523623192861417,0.2808952005684321,0.3305631346577989, - 0.6857580324047194,0.78950721141067,0.8807755242176112, - 0.4790578522946484,0.7312056921497674,0.5474986596025796 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + return pointshell; + } +}; - return pointshell; - } - }; +//Distributed Pointshell 15 - 30 - 45 +template<> class ThreeLayerPointShell<15,30,45, vnl_matrix_fixed,vnl_matrix_fixed,vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell1() + { + double coords[3*15] = { + -0.8262066830854160,-0.4726354124122490,0.3065913954417130, + -0.1648544111105980,-0.8594278487393920,-0.4839491666988980, + -0.0358642514967783,-0.3860637871945480,-0.9217746512470260, + -0.7684991573547760,0.6362727605963740,-0.0675723261999100, + 0.1470231744209000,-0.2445782513554300,0.9584183142798970, + -0.4269215415769730,0.7783400701208900,0.4603528348796690, + 0.3354375712062210,0.5671194195694440,-0.7522348036155240, + 0.4782763791345030,0.8758625019989820,-0.0641606012602034, + 0.9898549006984430,0.0293790674196844,0.1390113159452260, + -0.6942246846812260,0.1045517495672360,-0.7121243001342390, + -0.5002034766634700,0.0396563572397201,0.8649993383027830, + -0.3370551539814700,0.7499893159794020,-0.5691307838197430, + -0.8609008763099680,0.2402687527531810,0.4484647228257290, + -0.6557865116475140,-0.4999608118385060,-0.5656706088944040, + -0.0693103556967315,0.9875634181798020,-0.1411189911607090 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); - template<> class PointShell<252, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 15; c++) { - double coords[3*252] = { - 0.9756767549555488,0.9977154378498742,0.9738192119472443, - 0.8915721200771204,0.7646073555341725,0.6231965669156312, - 0.9817040172417226,0.9870396762453547,0.9325589150767597, - 0.8173592116492303,0.6708930871960926,0.9399233672993689, - 0.9144882783890762,0.8267930935417315,0.6931818659696647, - 0.8407280774774689,0.782394344826989,0.6762337155773353, - 0.7005607434301688,0.6228579759074076,0.5505632701289798, - 0.4375940376503738,0.3153040621970065,0.1569517536476641, - -0.01984099037382634,-0.1857690950088067,-0.3200730131503601, - 0.5232435944036425,0.3889403678268736,0.2135250052622625, - 0.02420694871807206,-0.1448539951504302,0.5971534158422009, - 0.4482053228282282,0.2597018771197477,0.06677517278138323, - 0.6404616222418184,0.4782876117785159,0.2868761951248767, - 0.6459894362878276,0.4789651252338281,0.3200724178002418, - 0.4973180497018747,0.6793811951363423,0.8323587928990375, - 0.9308933612987835,0.4036036036586492,0.5984781165037405, - 0.7817280923310203,0.9140795130247613,0.4809905907165384, - 0.6759621154318279,0.8390728924802671,0.5347729120192694, - 0.7094340284155564,0.5560356639783846,0.2502538949373057, - 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-0.2130455201840074,-0.3943555879655132,-0.5438582278251758, - -0.03496843048443223,-0.2252069693946209,-0.4261053308619027, - -0.5992598174372795,-0.720136706807033,-0.2236017161594696, - -0.4317330442416767,-0.6250530132529536,-0.7675317913865697, - -0.4101898771205939,-0.6101488498350025,-0.7728099228904255, - -0.5638041319099237,-0.7350961954485662,0.6411372723067146, - 0.6002931843810706,0.5219523372221417,0.4191004905746099, - 0.4596949806286311,0.3916338931244087,0.2980734064957148, - 0.226741584116328,0.1432114770939381,-0.02097489882147943, - 0.8608164411414747,0.7207644427956729,0.5303678926086439, - 0.3211867913977836,0.9015721838250796,0.7879881821713033, - 0.6114960278478284,0.3951892122332402,0.1820657113417612, - 0.8070430398170311,0.6574928275930984,0.4544842943197335, - 0.2358529185889448,0.6597856586149884,0.4841878538357612, - 0.2789921022280572,0.4842093252521232,0.3043325272261384, - 0.5992589358516202,0.4261046359672609,0.2252066549797059, - 0.6250522113657903,0.4317325950511361,0.6101482870567641, - 0.9096403689902206,0.9275522217134882,0.8909112253661301, - 0.796262827475376,0.6691520068054228,0.8241233338640371, - 0.810859375773786,0.7430057321681839,0.6332085061147845, - 0.6854064426268304,0.6413714065577412,0.5581299045184589, - 0.5164832226272315,0.4563611494403301,0.3496833143594963, - -0.3951892821849063,-0.6114960336943951,-0.787988199289983, - -0.4544844137443082,-0.657492739431111,-0.484187939006181, - 0.4936478319326018,0.2653148405479006,0.01970714938077021, - -0.1989850169013517,0.4302075642722875,0.1852629793843341, - -0.0559739158243807,0.3387563694841473,0.09867487876932232, - 0.2393267951217032,-0.999553621201999,-0.9653354239158236, - -0.8682642090770526,-0.9597077173597477,-0.8918540989344099, - -0.8573751662344773,-0.2980738893651726,-0.3916343988495664, - -0.4596955428592778,-0.4950341577852201,-0.1432117197792371, - -0.2267418620329016,-0.2909964852939082,0.02097514873862574, - -0.05800679989935065,0.1653145532988453,-0.3786231842883476, - -0.1464197032303796,0.09531724619007391,-0.1924163631703616, - 0.05252803743712917,0.006318730357784829,-0.3534800054422614, - -0.1720548071373146,0.02057294660420643,0.190134278339324, - -0.1169519894866824,0.07636807502743861,0.2529338262925594, - 0.1271908635410245,0.3046134343217798,0.3366066958443542, - 0.6094980941008995,0.7135382519498201,0.7711196978950583, - 0.7870198804193677,0.8705500304441893,0.9132984713369965, - 0.403998910419839,0.62060207699311,0.7967976318501995, - 0.4726965405256068,0.6757048258462731,0.5106167801856609 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + return pointshell; + } - return pointshell; + static vnl_matrix_fixed* DistributePointShell2() + { + double coords[3*30] = { + 0.2837014644823930,-0.2206420544708420,-0.9331830275189480, + 0.6952056236193340,-0.1366087970901870,-0.7057104062188850, + -0.3982427056422320,-0.8946622247526970,-0.2024407345454680, + 0.6912813662578750,0.2350369054844600,0.6832918305709010, + 0.3004304980870820,0.2618613453462440,0.9171532868788080, + -0.8122424463478870,0.2721420733854360,-0.5159466060013130, + 0.9419343376574850,0.3217426374876110,-0.0961320901898529, + 0.7896221636664980,0.5657937790715650,0.2374325971945600, + 0.4752045378048260,-0.5551457462701800,0.6826374203395420, + 0.7035350948936570,-0.6486284012073840,0.2903783177169470, + -0.9657370911439440,0.2516454388878180,-0.0634542660172643, + 0.4335627021602730,0.7069616605804370,-0.5587741885277380, + -0.8057237269560320,0.4981857033689590,0.3203440038128640, + 0.9405564452144110,-0.0095010729465114,-0.3395044962566700, + 0.1927525893653990,0.9455549503304530,-0.2622446857393060, + 0.0977862568275677,-0.8610667582542970,-0.4990008875794600, + -0.9244603975979140,-0.1428771862175540,-0.3534955203841470, + -0.0587838438498267,0.9919184790835770,0.1124374962135020, + 0.0413372764424745,-0.4921846796379190,0.8695087525183610, + -0.0416085831127836,0.5985263605884460,0.8000218256348350, + -0.0355639978656969,-0.0871145642116132,0.9955632851597270, + 0.4117279464778380,0.2997527998928850,-0.8605976743203040, + -0.3489182251383090,0.9011702877335440,-0.2571928938998360, + -0.4466362970172200,0.1524928751735680,-0.8816246033363880, + 0.7474002986676580,0.3366743112988240,-0.5727505579769920, + 0.0459516120636567,-0.8054328299457180,0.5909030426342220, + -0.6709586581555420,-0.7177574233281400,0.1861149115559070, + 0.4102749262480260,0.6499693688374480,0.6396986043952450, + 0.4840608825017460,-0.5520432393197750,-0.6789207052027200, + 0.4932109057185150,-0.8496377203461870,-0.1867049722028180 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 30; c++) + { + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } } - }; + return pointshell; + } + + static vnl_matrix_fixed* DistributePointShell3() + { + double coords[3*45] = { + -0.5319244251302650,-0.0924062555950406,-0.8417348097095310, + -0.1568078023044440,-0.3505682049930730,0.9233164391390330, + -0.0268033601770698,0.1671912039337100,0.9855600850330810, + -0.8635644949706830,0.4302558439150240,-0.2629377717312540, + -0.1232991287092530,-0.6582015219317060,0.7426762965022680, + 0.2376788616301610,0.5073218686335690,0.8283316246168160, + -0.2566320540992200,0.7153437906464810,0.6499409588511380, + -0.2043674419674510,0.6455892128571940,-0.7358318536908470, + 0.4526173742466210,0.8360898783655450,-0.3099858510073980, + 0.6836009409422150,-0.5146343588192300,0.5175337962545400, + -0.2416560443524480,-0.0050416195905518,-0.9703488745290690, + 0.6217071536966980,0.1629149642421430,-0.7661193963530300, + 0.3925487362456630,0.8090879125984540,0.4373582505898420, + 0.9937673576390050,0.0621775579881003,-0.0925223766114162, + -0.6145262933579910,0.6346672434383510,0.4685668841030610, + 0.8259615790179220,0.5617603544414460,-0.0470401335461508, + -0.9322660404149650,-0.3254138676429420,-0.1580691134746520, + 0.1164156506796110,-0.9181409097759250,0.3787672980507660, + 0.3168138266596370,-0.3901334055493560,0.8645374052704360, + 0.2176339314862630,0.9758048396839600,-0.0209853929005879, + -0.8962471871878890,-0.2522993236544900,0.3648095814822890, + -0.6612497786305060,-0.6092040683197140,0.4377432277075390, + 0.6864998437314790,-0.7035766895855040,-0.1835696228371040, + 0.5089165208574290,0.4070575405636090,0.7584906943850230, + -0.8813116916999880,0.4680173236355270,0.0651880882519394, + -0.2012114505332470,-0.8431942495440670,0.4985352642593330, + 0.5022346836643460,-0.7613661632799880,0.4099779115231480, + 0.2920837705654530,0.0626526547841476,-0.9543383654767130, + 0.9371632886212690,-0.1374669688206610,0.3206677454060930, + 0.5505816317240350,0.4677412077906900,-0.6914318689087190, + -0.7167807102053720,0.3777968874482810,0.5860844011845660, + -0.2932320783275170,0.9560381526252190,-0.0024492784000661, + 0.6321152281530360,0.6671359233891630,0.3941573265343710, + 0.8208025699405450,0.0279728493062268,-0.5705266522088930, + -0.2446598581934500,0.4624912733458210,0.8521991409686590, + 0.5981132830055560,-0.3201976866112960,0.7346658711149490, + 0.5635872282435520,-0.8205568040328310,0.0951628473521853, + 0.8170510623081950,0.3573123713720030,0.4524990948560730, + -0.1077825148871900,-0.7347609483441290,-0.6697083531456270, + -0.9500761846368700,0.2288974134306240,0.2120406034480560, + -0.2525195159846320,0.9165943360942510,0.3099818012187580, + -0.1132939165725980,-0.9559551317814730,-0.2707660881430790, + 0.6286490080714330,0.7713217806218580,0.0993133192936744, + 0.8227143106676380,0.0339170261757165,0.5674423304249230, + -0.5076617466917020,0.3007946007639900,0.8073426528415060 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(); - template<> class PointShell<362, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 45; c++) { - double coords[3*362] = { - 0.9756767549555487,0.9966345256373878,0.9881046683022421, - 0.9397937974509782,0.8528238339140162,0.7412214378486838, - 0.6231965669156312,0.9834769262997924,0.9946239689739521, - 0.9675363014408187,0.8953435882073797,0.7874413200090197, - 0.6642104349774659,0.9602286065935876,0.9526601679743949, - 0.9016229543668698,0.8082746868815032,0.68966672282401, - 0.8971014254962764,0.865591182877164,0.7933984257386667, - 0.6899186612252972,0.7970712198937139,0.7447486127431006, - 0.6617902410567804,0.6754324093484999,0.6115790799976598, - 0.5505632701289798,0.4375940376503739,0.3383775196739809, - 0.2130515669413184,0.06907711216819173,-0.07773888316805401, - -0.2106409255960856,-0.3200730131503601,0.5092547181142852, - 0.4023388431564537,0.265404014577164,0.1102235177567159, - -0.04300669133613336,-0.1770183828831563,0.575075565563677, - 0.4585983658816588,0.3107083252171692,0.1482373789939068, - -0.006505365777837463,0.6235168560971455,0.4966123011343984, - 0.3414318272800055,0.178171381919271,0.6463093264667951, - 0.5114333072914884,0.3555189519163455,0.6437455132939696, - 0.5064909697503934,0.3200724178002418,0.4666605048128079, - 0.6201479032959075,0.7616224484252742,0.8717669667532965, - 0.9417225609211535,0.3896493566867455,0.5498790773446007, - 0.7090922337204692,0.8433688828589941,0.9352336066902967, - 0.4569904905821254,0.6220231833138386,0.7744719807282636, - 0.8905764752647638,0.5117469206751248,0.6692307929647209, - 0.8035074327650433,0.5454521871592555,0.6853580997057199, - 0.5566669166856135,0.2502538949373057,0.3059448167491349, - 0.3600408236839538,0.4043068999720242,0.4319414682718342, - 0.441694708443188,0.4034206272561209,0.4730271557866856, - 0.532848297654098,0.5712181400125941,0.5831430197408345, - 0.573108039637807,0.5665551499276381,0.6430548267994817, - 0.697797754038698,0.7197945422057391,0.7103565350090897, - 0.7205836671095895,0.7916313033238946,0.830001177910469, - 0.8306996157029517,0.8449704612165639,0.8994200667307424, - 0.9168712118355732,0.9290744770112713,0.9630120083465428, - -0.4375932291383153,-0.3383769257894378,-0.213051272338593, - -0.069077150725739,0.07773856031405026,0.210640419502912, - -0.2966224671809508,-0.1723655417522876,-0.02500201334267453, - 0.1301781584808292,0.2729791005675229,-0.1245894223683107, - 0.02220568982766716,0.181648017057727,0.3325661017840546, - 0.06640211724156465,0.224593525159963,0.3797737583307059, - 0.2546621526726748,0.4084582460890006,0.4194124862841989, - -0.6231952788307172,-0.5191377313825043,-0.3823142165271753, - -0.2192092047974507,-0.04708691012811009,0.1137784201343049, - -0.5064899646320268,-0.3766634899185586,-0.2148504892229182, - -0.03595624973804722,0.1367370476543766,0.2846552253706529, - -0.3555183995893311,-0.2005508680670486,-0.02217694060430831, - 0.1572376520619428,0.3149362814931866,-0.1781713502362079, - -0.007356907961155389,0.1715373930872541,0.3352293490184234, - 0.006504983859799645,0.1777752170237141,0.3417324928044827, - 0.1770178009419758,0.3352469806136632,-0.2502532651867688, - -0.305944136422603,-0.3600400745299253,-0.4043060780204903, - -0.4319406005716204,-0.4416938460694254,-0.1269352612818317, - -0.1739928009393344,-0.2202529758737042,-0.2586227459701909, - -0.284108486127532,0.01921174674137865,-0.0178650781598001, - -0.05758606025521316,-0.0946046496972474,0.1765178736510398, - 0.1461529703905971,0.1077831731751904,0.3265627679363224, - 0.2967152689909496,0.4533499532981318,-0.9756765814639009, - -0.9966344649740785,-0.988104613901425,-0.9397935597648753, - -0.8528232434185344,-0.7412204556286736,-0.9630117602017364, - -0.9724898559386537,-0.9443983719046766,-0.872205391539895, - 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0.1728397432053184,0.8449014608184471,0.7346429035325667, - 0.5811577408091089,0.4004001175275866,0.2185687785328751, - 0.7389959159190774,0.6053871763277086,0.4382657239603054, - 0.2593815856416469,0.6026910636921159,0.4554759872637936, - 0.2895245326714229,0.4546219464457031,0.3068056829967603, - 0.6149259495773405,0.4836668020692608,0.3245214821530512, - 0.1582018910739125,0.6474451599919397,0.5000325428335932, - 0.329154569384261,0.6520781574644046,0.4929329083973684, - 0.6282220041094108,0.9185503953325266,0.9400278438555837, - 0.9267983622223734,0.8709396068783997,0.7797212987315195, - 0.6715195494525621,0.8589483198537152,0.8608977587445145, - 0.8243822455102904,0.7491802985670569,0.6496025629973337, - 0.7605089118538747,0.7391384910218132,0.6832797730640632, - 0.6002024649156599,0.6307853921801013,0.5905963116881646, - 0.5261125320735169,0.4877738980761407,0.4383677443133593, - 0.3496833143594963,-0.3468072634833415,-0.5296559121107985, - -0.6967772517279487,-0.8264212573361066,-0.4004002676068469, - -0.5811577408091089,-0.734642815176818,-0.4382658852809146, - -0.6053870894221652,-0.4554761269845107,0.5333893556910446, - 0.3559338950225972,0.1542897676170885,-0.04530002222683179, - -0.2202350051083672,0.491677469651672,0.2970021583546204, - 0.08838916973894111,-0.1061134148983228,0.4257769268822734, - 0.2241327483663198,0.02151295276860445,0.3442643233016264, - 0.1482544392795429,0.2600167460395648,-0.998637827838979, - -0.988066142434594,-0.9322073703652781,-0.8383312666748716, - -0.9834332923270373,-0.9498619694604108,-0.8717158495436891, - -0.9229416329138649,-0.8670829638030551,-0.8250355565045274, - -0.3039772599799364,-0.3865262864971092,-0.4552902929786847, - -0.5013199694054605,-0.5243381301130434,-0.1820189194073548, - -0.2568086311939767,-0.319546898969995,-0.3638250562458945, - -0.04627540884770265,-0.1150393837809054,-0.1758296738027379, - 0.08558690678521951,0.01939866440958929,0.1991961595715477, - -0.4397580914639075,-0.2580566866135989,-0.05641266799084353, - 0.1389310087452558,-0.295922215665352,-0.0965434988571485, - 0.107365815243832,-0.1321437542333658,0.06950025525528913, - 0.03026233882278601,-0.4148593732748149,-0.2745272477919344, - -0.1153816305493603,0.04186543327713237,0.1794701997231261, - -0.2291653183673072,-0.07170210104888378,0.08912594410177796, - 0.2326162031595532,-0.02465773800362392,0.134487905062478, - 0.2808952005684321,0.1720476740810845,0.3176193294845107, - 0.3399578552959914,0.5574798958328108,0.6515250645580214, - 0.7202890442609949,0.754822534930785,0.7120168974234773, - 0.7995412648414353,0.8495448706478895,0.841272643210163, - 0.9100366384710021,0.9284251625234463,0.3539783956892765, - 0.5371522584244614,0.7042734954121332,0.8335921603240184, - 0.4153929051801631,0.5965106290979496,0.7496353473630305, - 0.4607548496345096,0.6278760663083329,0.4841605931432954 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } + + return pointshell; + } +}; + +//Distributed Pointshell 22 - 46 - 67 - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); +template<> class ThreeLayerPointShell<22,46,67, vnl_matrix_fixed,vnl_matrix_fixed,vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell1() + { + double coords[3*22] = { + 0.25642497332897700,0.69733994966702500,-0.66930055106179500, + -0.63587617425647900,0.60181880252846700,-0.48319314971980300, + 0.02750479511080110,-0.49812287900990700,-0.86667011235694100, + -0.35667911834084000,-0.89655924253456900,0.26260527634729500, + -0.97064232445283100,-0.10849397816068500,0.21466842963899700, + 0.13668042906880200,-0.37888572303413600,0.91529452592620000, + 0.51081097493717800,0.82410825259274000,0.24478099577432200, + 0.56937377655062700,-0.82148556938178300,-0.03122437948083380, + -0.70712711556887700,0.17758768051548200,-0.68442228058149100, + 0.77448769645207600,-0.17248893945546000,-0.60861841395893200, + -0.10740168736203100,0.99190238197584200,0.06778305232459120, + 0.33092898900280500,0.01295617559776370,-0.94356671293102500, + 0.96250467033690100,-0.16189196397475400,0.21765971510605600, + -0.45033217736158200,0.66660174976094400,0.59400592358024700, + -0.85650276118059000,-0.36171210207403600,-0.36819475186809100, + 0.27465477100258400,0.05835151655784800,0.95977073162340000, + 0.11563788475332800,0.85791228608919200,0.50061401197628500, + -0.54693056940441200,-0.44061696250608900,-0.71184523922189100, + -0.84737370301991400,0.46653338404151400,0.25358314022247300, + 0.81343236730821000,0.56190972107245100,-0.15028389527703900, + -0.18653146496488500,0.84209830314271900,-0.50603997907498000, + -0.63212021995023600,-0.37635030041830100,0.67733631152118100, + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); - return pointshell; - } - }; + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 22; c++) + { + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } + return pointshell; + } - template<> class PointShell<492, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() + static vnl_matrix_fixed* DistributePointShell2() + { + double coords[3*46] = { + -0.23824007219091700,-0.86075578881685600,0.44982345428038400, + -0.51769500181405200,-0.84172584112854800,0.15326282482449900, + 0.44541900890312100,0.24566021345088800,0.86096049040302900, + -0.07063199679231950,-0.74435681728880700,-0.66403618093053200, + 0.28462319785348100,0.44431638677441600,-0.84945428581377100, + -0.64536739671188300,-0.00105803610891677,-0.76387158856768400, + 0.99957798463419400,-0.02741827295649930,0.00959640259292167, + 0.25010658086046200,-0.76013925657241700,-0.59969576355667200, + 0.39532812932947400,-0.74907082575728600,0.53160941315984400, + -0.34325878056226200,-0.92866133182164700,-0.14057574593845400, + -0.26920408631492800,0.17274923523146300,0.94746338274272500, + -0.54467024543405600,0.38808975702695900,-0.74345185737178700, + 0.52496025794034400,0.62807129953803100,-0.57440679860166600, + -0.78050768202914100,-0.24385280423360000,-0.57562450274541400, + -0.71694800106757700,-0.61231043102019300,0.33325890810159900, + -0.79056173292908700,0.40623831712611600,-0.45823855809687000, + -0.01131173053347560,-0.71410951594821100,0.69994260049274700, + 0.51711028616473900,-0.41981678757221700,-0.74588927919307400, + 0.09293538971980670,0.99313719503650500,-0.07100369830262170, + 0.06305806394427750,0.10620573522794300,0.99234269402071500, + -0.33630459418638300,0.16690245213556600,-0.92684561357340800, + -0.91315571223437600,0.04840489638883500,-0.40472658822878600, + 0.93648363925049100,-0.29927660444831100,-0.18284394287491200, + -0.05612562081659480,-0.20305248576816200,0.97755797920702400, + -0.37275429556215800,0.89636189167834400,0.23997832045161700, + -0.67013076748237900,0.05267398640468540,0.74037166722512800, + -0.71746069173368600,-0.55944913994429100,-0.41505037722258700, + 0.32124017988313500,-0.93693212076753000,0.13770601984920100, + 0.28299823115899100,-0.54968353921141900,0.78597710391644900, + 0.15427673771645000,0.42717011000338400,0.89091210863881800, + 0.73177570493927800,-0.66613283838403200,-0.14412272300735500, + -0.75153823442269900,-0.65477491803088400,-0.08037467834125450, + 0.48366214065856300,0.15108779957940700,-0.86211565959088600, + 0.93951136227144300,0.29289842100589400,0.17756383397277200, + -0.87960856796377400,0.45546435899697500,-0.13726246700461500, + -0.64569564311752200,0.72655108088168600,-0.23494821414239600, + -0.78338372249755100,-0.28544299520279600,0.55211614703387900, + -0.21774715968345700,0.47658876151730000,0.85173313123606500, + -0.02304329061227880,-0.94618817341094000,-0.32279551926107200, + -0.57374791604915700,0.69666566365718000,0.43066260797792600, + -0.07108119393689040,0.93003463387864700,-0.36053161255944900, + 0.76657473659095900,-0.39315791656506800,-0.50773026880688800, + -0.92597907090953600,-0.32929755574671300,0.18473191390972800, + 0.91121096468807600,-0.03396316106949220,-0.41053755190286000, + -0.43706646286549800,-0.78947199903364200,-0.43093719934587400, + -0.40196779675371200,-0.59965623521593900,-0.69197853286038600, + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 46; c++) { - double coords[3*492] = { - 0.9756767549555487,0.995129146382046,0.9942990656144199, - 0.9656349505028294,0.906669314667086,0.8226336999568686, - 0.7243638464104109,0.6231965669156312,0.9839703767589784, - 0.997142038124067,0.984428692964357,0.9391662760580684, - 0.862670051560969,0.7648456045484533,0.6590519021583431, - 0.9707167715611407,0.9718838371878742,0.9426229117731289, - 0.8796306184740903,0.7892458129328142,0.6846076300785651, - 0.929183358966584,0.9136522029381524,0.8666502644050813, - 0.7898345918065129,0.693320589737796,0.8580670030245058, - 0.8250351905308677,0.7641558269670571,0.6811699046825979, - 0.7636773150775941,0.7169778531093051,0.6492336193335421, - 0.6574101272386674,0.6032570204852985,0.5505632701289798, - 0.4375940376503738,0.3542026794336651,0.2512745383622963, - 0.1321836977435469,0.005435183516526082,-0.1177256014717769, - -0.2278158095071639,-0.3200730131503601,0.499121216713679, - 0.4104288008617515,0.2993922246212043,0.1713800199472592, - 0.03766821044034947,-0.08889959511906904,-0.1993010113619456, - 0.5575360887326264,0.462310883286662,0.3429526003657482, - 0.2075487278198905,0.06972486181048379,-0.0574641852590465, - 0.6055762148233742,0.5027272059054465,0.3761219220443625, - 0.2365775369888062,0.09858215717061569,0.6366252883681098, - 0.5264243511029411,0.3955623729759449,0.2563797979489069, - 0.647928555739847,0.5327472238507116,0.4019285426857001, - 0.6416958910015911,0.5252922545125212,0.3200724178002418, - 0.4449423089720693,0.5765874507842912,0.7038338496229432, - 0.8135085046154491,0.8958808454008315,0.9485590875281112, - 0.3796302423021757,0.5151344445922483,0.6532516657507655, - 0.7794467577011209,0.879719713309462,0.9471999912418547, - 0.4385611209938041,0.579827292674625,0.7171156368030697, - 0.8342797026222076,0.9195293587283735,0.4904847582024935, - 0.6301148467885526,0.7583069705424822,0.8604123883748889, - 0.529043067100619,0.6594466179023598,0.7726806309784415, - 0.5508150816257275,0.6670356654438421,0.5566867904077125, - 0.2502538949373057,0.2979150767790733,0.345210193321538, - 0.3870703453412754,0.4184100968812649,0.4364489070347424, - 0.4418245296642042,0.3805829325031832,0.4390055479929592, - 0.492568207092815,0.5338014037295256,0.5572819316169835, - 0.5624691657697151,0.5532743164301828,0.5199151685430116, - 0.5855041443032848,0.6393053209231115,0.6727852191382864, - 0.6825747626046904,0.6719797747984303,0.6571141852151331, - 0.7228163905998002,0.7689467902788032,0.7886244561063042, - 0.78247330591778,0.7784686816166657,0.8360899632174316, - 0.8684468597631155,0.8724880558103147,0.8732117959842211, - 0.9170839626929869,0.9340377000206754,0.9378324283560583, - 0.9666143691402809,-0.4375932291383153,-0.354202049210883, - -0.2512741515648044,-0.1321835946181268,-0.005435354322950186, - 0.1177252152663303,0.2278152856398797,-0.318790682468547, - -0.2170414107297249,-0.09666371763400751,0.03477626912480049, - 0.1650597498899593,0.28228599025285,-0.17643804815428, - -0.05685397486912016,0.07657633376040601,0.2119799408472924, - 0.3357313012364012,-0.01650847491202961,0.1157420722211241, - 0.2531713417578513,0.3818912918445931,0.1487980970433173, - 0.2844888970254793,0.4153506930815835,0.3048153313129787, - 0.4341873267571942,0.4402832445658493,-0.6231952788307174, - 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0.7764214244136933,0.8500106167743341,0.8943583778920716, - 0.8725105875877179,0.9304985104221231,0.9362840195367765, - 0.3187873126271887,0.4751176460530464,0.6264663831892676, - 0.7569806648964799,0.8565378137633573,0.3724393069541885, - 0.5311885746144091,0.6770114116120104,0.7952337966915513, - 0.4176372345893317,0.5707694457794332,0.7042664250854263, - 0.4489457715859918,0.5898772631309003,0.4647496441635906 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } + + return pointshell; + } + + static vnl_matrix_fixed* DistributePointShell3() + { + double coords[3*67] = { + 0.56913096982886400,-0.78778656243185400,-0.23554674957098500, + -0.83141868259485000,-0.50643545944750500,-0.22861780255797400, + 0.66520728747741500,0.16406099937578400,-0.72841145870363500, + 0.89843444153226500,-0.32337141111972700,0.29706309891846700, + 0.10682918210921600,-0.98310908722825000,0.14860702695065500, + 0.47695410914339100,0.34004755151800200,-0.81048284403671700, + 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-0.49988083572550200,0.08893492748180820,0.86151594805214000, + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(); - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 67; c++) + { + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } - return pointshell; - } - }; + return pointshell; + } +}; +// Distributed Pointshell 30-60-90 +template<> class ThreeLayerPointShell<30,60,90, vnl_matrix_fixed,vnl_matrix_fixed,vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell1() + { + double coords[3*30] = { + -0.0384531292653293 ,0.0948025501623591 ,-0.9947531519590260, + 0.5110816729083550,0.5146956026128700,0.6883923011395250, + -0.1446942037238470,0.9515456918526300,0.2713381354056610, + -0.4478957210732550,0.8874427193875220,-0.1087880639148770, + 0.0234550198951957,-0.3332336016908820,-0.9425525071558810, + 0.9229881949625620,0.3842551764058190,0.0209940792863651, + -0.6911807120917000,-0.6043864949901590,0.3962148254494260, + -0.0316674103891205,-0.6829866700288160,-0.7297440535435660, + 0.8018580068378580,-0.1378458982057450,0.5813968053041460, + 0.3973142766999960,0.4262411104325310,-0.8126868285555020, + -0.8315080441618440,0.3951380066705710,0.3904616859290430, + -0.8752414233521170,-0.2348057149272050,-0.4228696336769560, + -0.2818275522720080,-0.8725715270267310,-0.3989889234084150, + 0.2217711399465410,0.7995959805053020,-0.5580894457401740, + -0.3678809968698430,-0.0344850464711680,0.9292332073876450, + 0.6642059344014850,0.6635911630050780,0.3442052368680880, + -0.8248962619923230,0.5292990045320030,-0.1984659183651500, + -0.1835415051538410,0.8857989535243100,-0.4262308410017950, + -0.1166555399998580,-0.9878457938197680,0.1027237685247790, + -0.5153844228415700,-0.8501138123201320,0.1080990415997830, + 0.5451858248749490,-0.3086757610614890,-0.7794175330902750, + -0.5671903126002800,0.6003393592309330,-0.5638153980254410, + -0.4890503721480340,-0.1375661511749660,-0.8613392406902020, + 0.3976996460860260,-0.6740608343992310,-0.6224764919513510, + 0.4349956952359570,-0.3316293950165250,0.8371383932702870, + 0.6340600901853650,-0.7334511285536860,-0.2449841710344760, + 0.9845956419603380,-0.1475029048111290,0.0938845828929696, + 0.9610090220995200,0.0558414999946514,-0.2708198410782880, + -0.7632149908465080,-0.1335295186020360,0.6321967616249480, + 0.0826215834627986,-0.6217188595585800,0.7788705499730220, + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); - template<> class PointShell<642, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 30; c++) { - double coords[3*642] = { - 0.9756767549555488,0.9936273045965159,0.9968737649581846, - 0.9799612120178374,0.9397937974509784,0.8775847359538656, - 0.7989268505692991,0.7116707502187636,0.6231965669156312, - 0.9839439883131955,0.997606269193783,0.9928389431247303, - 0.9642927845075879,0.9105363959854476,0.8355633282696746, - 0.7474316403407526,0.6549945735140008,0.9764792677814802, - 0.98203616585628,0.9657129396229355,0.9235205478703636, - 0.8567905682573015,0.7723352820545265,0.679558714000995, - 0.9483175267842808,0.9421385440112533,0.9121470670895898, - 0.8569526200134567,0.7808692882316954,0.6923761132322002, - 0.8971014254962764,0.8773049187483365,0.8343457228904876, - 0.7697920647699087,0.6899186612252972,0.8248449061833976, - 0.7923517869921962,0.7399265426789414,0.6712800260218211, - 0.7377425905504456,0.6958798370509692,0.6387690340353133, - 0.6438863846345996,0.5968935863094567,0.5505632701289798, - 0.4375940376503738,0.3657089664269339,0.2787444080680243, - 0.1782978006253255,0.06907711216819172,-0.04176369281672855, - 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0.6101418466998186,0.7256202393614284,0.8256057937005235, - 0.9026705854615993,0.9545776898360481,0.4242146396073646, - 0.5469136809977159,0.6694499319211135,0.7811234805255704, - 0.8720427891122669,0.9369519951934821,0.4722731360977363, - 0.595952912761318,0.7145554586697968,0.8172157093145741, - 0.8959095653312069,0.5117469206751248,0.6311048134383331, - 0.7406754453578036,0.8310759079383635,0.5392182936767531, - 0.6497579584113991,0.7472675269245613,0.5536544075493044, - 0.6528511281517397,0.5564810307882812,0.2502538949373057, - 0.2918876561725356,0.3336803609057232,0.3723595102048779, - 0.4043068999720243,0.4267717639621923,0.438887490788423, - 0.4417451579814044,0.3636248847448722,0.4137579266740147, - 0.4613876866690337,0.5016743933949674,0.5302454776050456, - 0.5449783839335098,0.5467236437808158,0.5384586718996058, - 0.4847692553550146,0.5414178984405463,0.5913899314506929, - 0.6286876371986284,0.6492812914734455,0.6528721916210272, - 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0.2778578974521733,0.1220490717256491,-0.02894436515050694, - -0.165545217365127,0.5218454423524129,0.3816396895816639, - 0.2274740807377008,0.07139849210836301,-0.07498829123147716, - 0.4727743520975624,0.326855199205205,0.1724763529977552, - 0.02151295276860444,0.4132109394322543,0.2667801205874505, - 0.1175096785325448,0.3486969033343195,0.2066532886754674, - 0.2845988618411943,-0.9915701323913838,-0.9983759139464571, - -0.9821329817122836,-0.9405392168410572,-0.8766846298252051, - -0.7979987142017131,-0.9950116201913212,-0.9915144412787341, - -0.9621574590524813,-0.9072363224101446,-0.8327566769720253, - -0.9752335225013484,-0.9586154363208594,-0.9159090584602802, - -0.8504523952727223,-0.9301899969464084,-0.9002463663906001, - -0.8470026365747616,-0.863227339500068,-0.8226636840857314, - -0.7819440310902068,-0.3091177896659217,-0.3738203674077975, - -0.4345157440029583,-0.4857190441849699,-0.5236263640902669, - -0.5474106128468904,-0.5588885443532919,-0.2253103954606045, - -0.2859350592025221,-0.3423578252345214,-0.3896842610441149, - -0.4250516888435538,-0.4483636748755489,-0.1299537462879293, - -0.1860031284708927,-0.2385761459990237,-0.2835635916740772, - -0.3187738370923436,-0.02887592341002545,-0.0811290830782055, - -0.1312824709082232,-0.175829673802738,0.07041398450649188, - 0.02047868355036482,-0.02876160928094873,0.1612839336168132, - 0.1123805173372347,0.2398380094723457,-0.5092306348673886, - -0.3871271308997349,-0.2468082566335953,-0.09665937383397012, - 0.05216495245602301,0.189540870507144,-0.4146244745670597, - -0.2786093002807504,-0.1281949271302634,0.02562556437243592, - 0.1710982989127918,-0.3031993859046618,-0.1571447546490307, - -0.00297925984664287,0.147247252029971,-0.1812460903983632, - -0.03150492197167008,0.119051661271318,-0.05782450627681404, - 0.08860617741886109,0.05832260658459812,-0.4847695337402862, - -0.3923591556376936,-0.2838184503258238,-0.1653148824643805, - -0.04565210375030839,0.06672910665806144,0.1662653402185898, - -0.3594180507425287,-0.253319097564816,-0.1350560618895416, - -0.01320461850800903,0.1028580486723768,0.2061840662709727, - -0.2162633298539993,-0.1003749112365929,0.02129875586186771, - 0.139247419944916,0.2454372621958313,-0.06398217348632655, - 0.05523623192861417,0.17302500577526,0.2808952005684321, - 0.08611242071710691,0.2016814632806757,0.3097650809527805, - 0.2239251562628219,0.3305631346577989,0.3434314452768145, - 0.4927814627145429,0.5662581542385627,0.6318399645986254, - 0.683043240780333,0.7160640841376876,0.7310741891309572, - 0.6101863849438733,0.6857580324047194,0.7475639112793486, - 0.78950721141067,0.8099276375885235,0.7219272504872226, - 0.7938124902720932,0.8463855099577528,0.8755371018531016, - 0.8181741141101887,0.8807755242176112,0.9205806914487843, - 0.8917768010350154,0.9417121277771469,0.9407006846750625, - 0.2928563777418555,0.4282076937835696,0.5635232482078705, - 0.6879656610506216,0.7922901195775008,0.8719937126447483, - 0.3397879564876633,0.4790578522946484,0.6132791099941464, - 0.7312056921497674,0.8252311496217807,0.3821934817691987, - 0.520188888877212,0.6479602207299933,0.7555206677931847, - 0.415971059154168,0.5474986596025796,0.6648558465528478, - 0.4386113475958364,0.5599721413103722,0.4500523932965443 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + return pointshell; + } - return pointshell; - } - }; + static vnl_matrix_fixed* DistributePointShell2() + { + double coords[3*60] = { + -0.9757323531821020,0.1141645636029930,0.1868497454401630, + -0.3081645385608390,-0.9413175847225490,0.1376801433239040, + 0.2268128430936140,0.3605118823065700,-0.9047580433041550, + 0.0053723381344127,-0.9527141369992010,0.3038205245615180, + 0.4997098468405750,0.8591889901243150,0.1099288325223530, + 0.2826871445408290,-0.5384236997311110,0.7938437490332800, + -0.9169656502561230,0.3927426788378230,0.0701939062145264, + -0.4122096064130160,-0.6082501787985420,0.6783177429290540, + 0.8689901348066610,0.0966091330875035,-0.4853069348492570, + 0.9016117108528340,-0.0311940714365313,0.4314200421401830, + 0.0602430803117106,-0.3322121265937110,0.9412788504044060, + -0.7401273323624760,0.6637816179074090,-0.1077288058887970, + 0.2609246136270950,0.8706803367668190,-0.4169341640729010, + -0.3416095796360020,0.1763315450422400,-0.9231522525152230, + 0.2417187698627780,-0.7721496224459510,-0.5876708235505650, + 0.0613208945746505,0.1158091933659950,0.9913768096039370, + 0.6752331524032520,0.5192825815894980,0.5238375610371130, + 0.1859160712558880,0.0545608595018432,-0.9810496047902950, + -0.8705635614786970,-0.3824245858905910,-0.3096296522168640, + -0.7511998187032470,-0.2098339818012360,-0.6258342691652840, + -0.3238272471878560,0.9093048344891080,0.2613438959560160, + 0.0312467158098265,-0.9020995865833540,-0.4303951424415010, + 0.1997844244448850,-0.2949296496204980,-0.9343996390859500, + 0.0993378318350216,0.6282103369083360,-0.7716759473819500, + 0.7029961904247910,-0.5712633600352550,0.4236207380776580, + 0.6081885222938300,-0.0369636906278732,0.7929315272614730, + -0.8386908835040670,-0.4071869261928720,0.3616578618871240, + -0.6722483496885470,-0.0353283318457414,0.7394822954675930, + 0.0999489360975153,-0.5914665380137460,-0.8001109576696270, + 0.1502553918254090,0.7709976382621730,0.6188585937203620, + -0.2288419561759350,-0.9457701920389410,-0.2305430609326490, + 0.2000892573988740,0.4465173368776440,0.8721161373012560, + 0.6810481798116100,0.7159072717862530,-0.1537860688711920, + -0.9675337290891160,-0.1992515487286990,0.1554905251265250, + -0.6915973408017530,0.2529246583829880,0.6765517240963850, + 0.4051983586769120,-0.6954173613750950,0.5934719737474010, + 0.3828531024787670,0.6364092429998630,0.6696318222327270, + 0.5431852686098420,0.7191354072485380,-0.4333520854994610, + -0.4766435443833670,-0.7756897459394560,-0.4136621201440160, + -0.2634864894153490,0.9592084977706880,-0.1024398735848210, + -0.7706589629193440,0.6046810772525520,0.2011108094677480, + -0.5074055034405280,0.8063323635715170,-0.3039206714513410, + -0.5457935890943380,0.8354998025106060,0.0636351955151979, + 0.3190257966006890,0.1393790695388820,0.9374412067312650, + -0.4883735140357740,-0.2538251441534990,0.8349036513178050, + 0.7814334110960810,-0.3206898482390990,0.5352754853896490, + 0.5674042808667500,-0.3889648144620360,0.7257814789346710, + 0.7365968935987790,0.6532051494950900,0.1753512161740710, + 0.5454313517376770,-0.7269270773618580,-0.4172309489236830, + 0.9213613541912860,-0.2944856448350440,0.2537153128782090, + 0.8605683113688990,0.5039629381095560,-0.0737803393843139, + 0.9884254663736010,0.0653918314621231,0.1368904883553190, + -0.6908004715469640,0.4998012720691420,0.5224877002844740, + 0.6727955231552780,0.3943331152249490,-0.6259772985174470, + -0.4586010376503450,0.1473697927994620,0.8763373964611290, + -0.0145240600324916,0.9964844905654110,0.0825088585714514, + 0.5144395480682960,0.3368539248460700,0.7885945629403520, + 0.4119578382931460,-0.5109788900305280,-0.7544476876576700, + -0.1166393819714400,0.8099047244599660,-0.5748474509561170, + 0.8653655945438620,-0.2118053715810700,-0.4541815411805620, + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 60; c++) + { + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } + + return pointshell; + } + + static vnl_matrix_fixed* DistributePointShell3() + { + double coords[3*90] = { + 0.7830306271444820,0.5716685391117410,-0.2450675791359720, + -0.3870553382696590,0.9200004222080310,0.0615417602445897, + 0.9237963183374240,-0.2584997104179900,-0.2824504592668160, + -0.5842983723039450,-0.7712899205183550,-0.2524029925134570, + 0.3359998847225240,0.7641041306124860,0.5506804473080420, + -0.9783788169663750,-0.2066075720365220,-0.0093915754081947, + -0.0445468908163855,-0.8801917861335100,0.4725230091135180, + 0.8775085322085220,-0.2202272889989130,0.4260031890507770, + -0.5808389302765810,0.4437425367947590,0.6824358564100420, + 0.5331596759297140,0.4366496520639920,-0.7246225509290440, + 0.6151687893470670,-0.1325993633208080,-0.7771645703840200, + 0.4011147552907920,0.8712537751236570,-0.2828848041531790, + 0.7304993029031530,-0.0076263316203289,0.6828708571348050, + -0.5475051350669790,0.6162612183405430,0.5660920754123990, + 0.8023122911715880,0.2709359026259910,-0.5318728458036140, + 0.2336323077450560,-0.6929349377840680,0.6820975859625270, + 0.1689148924284850,-0.9486250397707260,0.2675411987635920, + -0.8314637780782760,0.5554909857699080,0.0098868838455222, + -0.1011517806960660,-0.2148730146317450,0.9713896771353290, + 0.3877486434569820,-0.3420676320990350,-0.8559443466531150, + -0.3648694025982520,0.8893842897839550,-0.2754376592499350, + 0.1726950806932710,0.9829215274686680,0.0635742081586933, + -0.3959729941386110,-0.7643798871495520,0.5088504456460080, + -0.9617290799445310,0.1062410103220330,-0.2525668713723110, + -0.0327316740125812,-0.4982367497870410,-0.8664229790800670, + 0.1706515883535990,-0.2008209194778680,0.9646496740747160, + 0.2501225023053060,0.6910620770273610,-0.6781385843138260, + 0.3654852701417630,0.4920313286800810,0.7901428281688790, + 0.9153163381057960,-0.3852897569037580,0.1172510316442380, + -0.6881847644097410,0.7218125899083820,0.0734051434441835, + -0.6873457829778960,0.2458189841721520,-0.6834682155324220, + -0.3219850147738870,0.8095000604196670,-0.4909534626027350, + -0.5632523312637280,-0.5973559275989310,0.5708876483936170, + -0.9084685052242310,-0.3740631899713040,0.1864449112315510, + -0.7845198100635990,-0.3605738415896990,-0.5044949676448910, + -0.2000039873810240,-0.6330205581036100,-0.7478525108936150, + -0.9148801969792540,0.0534543198667285,0.4001710395103400, + 0.7664323664233560,-0.3341914416639150,-0.5485412546174510, + 0.4872976306941970,-0.8343714235123850,-0.2576147254054740, + -0.6413753405832620,-0.2298206308844890,0.7319973702900570, + 0.7054813742936480,-0.6006428992790810,-0.3761969405382820, + -0.1929691654472430,0.9760562116682670,0.1003851226546300, + -0.9439691512808960,-0.1047955385010510,-0.3129538888403490, + -0.4276451629474120,0.0186575235064224,-0.9037541211105420, + -0.7344812627593790,-0.4734265259198780,0.4862145608790640, + 0.6377710213710160,0.3906960864871740,0.6637806055489840, + 0.0474387462958210,0.9621772979130640,0.2682618361425920, + 0.7913486901745450,-0.0748105169885527,-0.6067706626946760, + -0.0982434620561768,0.1155119940049920,0.9884357345848060, + -0.2883901942644810,0.3703318191063880,-0.8829979839215070, + 0.3295292140825860,0.2147146585289090,-0.9194063913628870, + -0.5210574847572160,-0.0609880081835259,0.8513398618861260, + 0.1729068266771900,0.9459249066560850,-0.2744618375222680, + -0.2062545956858610,0.4593595720405990,0.8639721206920620, + 0.6720182971610780,-0.4607369705129640,0.5797524060176540, + -0.2554108625029320,0.6389014951165470,0.7256515491979250, + 0.4500266667406290,-0.5361016246739610,0.7141925841425810, + -0.9983559681192810,-0.0042300087224308,0.0571617699762653, + -0.8406688842019840,-0.0901045876756096,-0.5340009273535010, + -0.3909575963129450,0.7939675140678560,0.4655832304648770, + -0.9713179118089640,0.2320449947116890,0.0519291308258172, + -0.0612195458720222,0.7850603547539780,0.6163865723689800, + -0.6242925102191230,-0.1774216962215860,-0.7607761848232110, + -0.0802679405745239,-0.4570324492769940,0.8858207482463910, + -0.3609460670444700,-0.2996972708558150,-0.8831191779860200, + 0.1285945459353310,0.8707004556055770,0.4747042862287270, + 0.5951730348219600,-0.7933110389121110,0.1281665095140040, + 0.2033751954557950,0.0131770863036256,0.9790122033304090, + -0.2052893840274300,0.8803381043882250,0.4276226032002800, + -0.3731942266334910,-0.9275730588324440,-0.0182835919789316, + 0.2685955896736170,0.5262799019911600,-0.8067749834793190, + 0.9390948774123210,0.2816262184669510,0.1969453840280110, + -0.9130820847807490,-0.2162790214867180,0.3456942164936930, + -0.7722185508796150,-0.6352920195758570,0.0090862280741177, + 0.1460103850487270,0.2737759341802480,0.9506459410956610, + -0.7668676175868570,-0.5322707367226740,-0.3586110984414160, + 0.5327000875787680,-0.1961334068751380,0.8232632042069670, + -0.8210993253048930,0.4385794796816200,-0.3652997919326650, + -0.6255762780977020,-0.7798597751409450,-0.0217497447925055, + 0.2991048825976350,-0.1334972919760040,-0.9448358281952090, + 0.0606298744362150,-0.9937831824740320,0.0933756100790349, + 0.8564420120030050,-0.4610622959465800,-0.2322254063032560, + -0.5455890340730230,-0.6468991032576630,-0.5327796506096080, + -0.8522969529983180,-0.5007967009121140,-0.1509720777671300, + -0.0228411934161264,-0.7512799112567760,0.6595883373933590, + 0.5854881600260220,0.7616691389056020,-0.2776035614111240, + -0.1213541141003080,0.4896966102871260,-0.8634062826179960, + 0.5356517245344040,-0.7170045054372250,0.4460737261776780, + -0.3912157018163170,-0.8815613582567070,-0.2641966053547140, + -0.6919685152992150,0.6644155090244570,-0.2823678544069240, + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(coords); - template<> class PointShell<812, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 90; c++) { - double coords[3*812] = { - 0.9756767549555487,0.9922508097125681,0.9977223655964853, - 0.9881046683022422,0.9605519470607568,0.9146195529015363, - 0.8528238339140162,0.7799959774035472,0.7017828679367573, - 0.6231965669156313,0.9837002757017411,0.9971982264747434, - 0.9970195212545997,0.9790578176231792,0.9411837637692063, - 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0.8481756214456443,0.7739454978673308,0.6820112173362239, - 0.5756807770328707,0.4607793683387657,0.3441535580133543, - 0.2318936078193602,0.926072164038092,0.8784582627879883, - 0.8124335550546075,0.7268690803364112,0.6236462465254911, - 0.5079539512218285,0.3871116910406285,0.2684634496083129, - 0.1575990472160092,0.8938553783036348,0.8365254960181361, - 0.7592600076242926,0.6622795368519036,0.5494016575639665, - 0.4275712710943025,0.3048730417540333,0.1882241880032878, - 0.8449014608184471,0.7764699938313133,0.6878549375110379, - 0.5811577408091089,0.4620991215146014,0.3386395224598848, - 0.2185687785328751,0.7783789236415784,0.6987988931237948, - 0.6005524285298199,0.4876744928391774,0.3671099975843117, - 0.2467262336464146,0.6961403422326237,0.6071556637949365, - 0.5027238349931351,0.3882403289629487,0.2708181010489455, - 0.602691063692116,0.5075711336386517,0.4012405518966602, - 0.2895245326714229,0.5040323033369615,0.4066733092394736, - 0.3024232018417092,0.4060107420397416,0.3099514873609258, - 0.6335657588222857,0.5613794019471703,0.4736554861193561, - 0.3731523315866652,0.2651882329560032,0.1563562968227162, - 0.05268329572084096,0.665582947801096,0.5867898301880646, - 0.4915853474795021,0.3840946840958189,0.2709312717864595, - 0.159304093053227,0.6881916390051439,0.6022052797777839, - 0.500032542833593,0.387223979093218,0.2712572035078997, - 0.6982061514387302,0.6053345332894541,0.4978439026516569, - 0.3823476853537574,0.694260458246256,0.5959850669993192, - 0.4857933245168793,0.6773738416456014,0.5761181477179906, - 0.6504762420694124,0.9303807852901133,0.9507032776506229, - 0.9587837990451511,0.9503957355401843,0.9230383566605702, - 0.8772253580218827,0.8166238578878361,0.7468180882094819, - 0.6735256647351061,0.90289835288087,0.9168546892221431, - 0.9163949287729053,0.8978540461202875,0.860125673826823, - 0.8055310756657073,0.7391548242370243,0.6670477005822436, - 0.8589483198537152,0.8640713573235344,0.8533431666375708, - 0.8243822455102904,0.7778864433741867,0.7177306948097215, - 0.6496025629973337,0.7974565860481383,0.7922442814347184, - 0.7711039549446601,0.7333755999307914,0.6813804770418425, - 0.6197567932818368,0.7199875994402858,0.704576762533665, - 0.6747371020412667,0.6314064480391776,0.5778277738330908, - 0.6307853921801013,0.6069786776259655,0.5714387199953477, - 0.5261125320735169,0.5356837831672402,0.5062803340418997, - 0.4682979008420118,0.4404811918375181,0.4083743128719785, - 0.3496833143594963,-0.2684635055945434,-0.3871116949027418, - -0.5079539380311434,-0.6236462513912529,-0.7268691253470475, - -0.8124336419036672,-0.8784583757439789,-0.3048731870534707, - -0.4275713388616055,-0.5494016757834509,-0.6622795348064975, - -0.7592600049270052,-0.8365254973182974,-0.3386397327605397, - -0.4620992154744972,-0.5811577408091089,-0.6878548720792258, - -0.7764698875810475,-0.3671102436707482,-0.487674577809656, - -0.6005523742168883,-0.6987987332107705,-0.3882405864046344, - -0.5027238913366621,-0.6071555453420947,-0.4012408083880579, - -0.5075711618348809,-0.4066735651215305,0.590170014682346, - 0.4889529277025601,0.3712641002824293,0.2416109555838913, - 0.1071269463449765,-0.02422904936538466,-0.1458333255362707, - -0.2536932284372023,0.575319376406684,0.4648174146687293, - 0.3383543572464268,0.2021589358241457,0.06461070043643219, - -0.06615813268612159,-0.1843477715691807,0.5490769699623794, - 0.4300389185128004,0.2970021583546204,0.157648053896879, - 0.02080258943368662,-0.1061134148983228,0.5110236542957048, - 0.3855280620563327,0.2493326170112359,0.110816873466397, - -0.02172081454080515,0.4627527059506328,0.3340234043580559, - 0.1986154658537707,0.06464563879740347,0.4076032405543511, - 0.2793076930534321,0.1482544392795429,0.3496322190693472, - 0.2250419477534466,0.2924718882891986,-0.9879747859642711, - -0.9977653310206788,-0.990523615974921,-0.9635714188487002, - -0.9173532159549495,-0.85560536501624,-0.7840895998008963, - -0.994817702995987,-0.997461134800403,-0.9806175623759372, - -0.9428891811827549,-0.886597265826606,-0.8171178418357974, - -0.9844549713337977,-0.9774884174060016,-0.9498619694604108, - -0.9020317021121872,-0.8381143412526206,-0.9543765048804849, - -0.9366308742795815,-0.8989025406729466,-0.8435127700618501, - -0.9052158630007405,-0.8774023054284241,-0.8320456365430426, - -0.8408670789696687,-0.805327187943167,-0.7671794966406347, - -0.3103320171372975,-0.3683216507471385,-0.4241912872571255, - -0.4739672217049487,-0.5142664654627133,-0.5433252645626975, - -0.5613214202090539,-0.5698903038330552,-0.2382044630883786, - -0.2931784077953506,-0.3457618730212876,-0.3922067754962655, - -0.4296555471996706,-0.4569589463091218,-0.4746877559159965, - -0.1563035449296971,-0.2076325381624787,-0.2568086311939766, - -0.300522327960348,-0.336453843995229,-0.3638250562458944, - -0.06807774532319075,-0.1159480367576914,-0.1623929246512774, - -0.2045548436199081,-0.2404752368196474,0.02150927301351948, - -0.02376587784419006,-0.06856585200941642,-0.1103578775111495, - 0.1072612554376189,0.06351038126206604,0.0193986644095893, - 0.1851333868984673,0.142087712340153,0.2529472816242414, - -0.5306278899290351,-0.4266789610910172,-0.3071587951012373, - -0.1768583830726642,-0.0430217688399398,0.08650278658817297, - 0.2053751597977648,-0.4507707926372612,-0.3353113300288001, - -0.2061367616665949,-0.06994142151255993,0.06489515773394869, - 0.1907063885440197,-0.3567595103770218,-0.231712075682342, - -0.09654349885714854,0.04067860126609572,0.171514533036228, - -0.2520107854074638,-0.1210920629807046,0.01510327295162653, - 0.1481956904535304,-0.1422232452547296,-0.01025728491155416, - 0.1219137656087612,-0.03395647625215152,0.09433895004400768, - 0.06716539409874363,-0.5063391876138633,-0.4283153498076878, - -0.3366780195432001,-0.2347914812056201,-0.1282104074092338, - -0.0232916058381637,0.07454407090624685,0.1619078867980062, - -0.3994539622273614,-0.310067650345868,-0.2090689910564566, - -0.101578111712534,0.005791506035575475,0.1068257468493955, - 0.1972675814170221,-0.2772576433388097,-0.1784304214682155, - -0.07170210104888376,0.0365513498207285,0.1396776293169983, - 0.2326162031595532,-0.1447608377351292,-0.04030095729466294, - 0.06718993398467658,0.1710983522944223,0.2658045221403088, - -0.009369596982657442,0.09582219059763358,0.1990980586833061, - 0.2946659462714916,0.1210154650283388,0.2222714245712332, - 0.3176193294845107,0.2401157501920485,0.3340749869695284, - 0.3444220768905359,0.4715398981500615,0.5369261966393798, - 0.5977544079195963,0.6492830104914913,0.6878295422870739, - 0.7119297300805439,0.7225291958412279,0.5754139764385705, - 0.6438104077520811,0.703735439041779,0.7501803284162304, - 0.7802875102236209,0.7941684049065568,0.6769937335137454, - 0.7445931056463463,0.7995412648414352,0.8374828910500066, - 0.8571440245657689,0.7693422116354997,0.8318956310273866, - 0.8783405275925528,0.9058193343789728,0.8463080799206776, - 0.900346626617332,0.936383240514816,0.9043683688324304, - 0.948119268339247,0.9433248910510675,0.2730237834281818, - 0.3918812540743772,0.512863760525918,0.6286055997510109, - 0.7317788088844818,0.817202970027369,0.883018402482024, - 0.3144121837974857,0.4374900830135051,0.559528090412838, - 0.6724058856901879,0.7691785827023693,0.8460642869454081, - 0.3533690330364157,0.4772888327771027,0.5965106290979496, - 0.7030444104060292,0.7911990697093608,0.3869476434981415, - 0.5079274002472546,0.6208051861357136,0.718636116718038, - 0.4127894497989522,0.5275207205127158,0.631704463913464, - 0.4298578384111184,0.536188255170367,0.4385954324163403 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + return pointshell; + } +}; - return pointshell; - } - }; +// Optimal PointDistribution For Multishell Scheme 50 - 100 - 150 +// Generated by Emmanuel Caruyer +template<> class ThreeLayerPointShell<50,100,150, vnl_matrix_fixed,vnl_matrix_fixed,vnl_matrix_fixed > +{ +public: + static vnl_matrix_fixed* DistributePointShell1() + { + + double coords[3*50] = { + 0.913310030405731,-0.305436511654557,-0.269394368368340, + 0.274520611983463,-0.931497424367645,-0.238644048726690, + 0.724295307031846,-0.291296816682609,-0.624933974754310, + 0.179546279617146,0.559467539325302,-0.809171926055848, + 0.333306860790720,0.932650091766363,0.138095412226576, + -0.423224047088266,0.854335111704236,-0.301650332132319, + -0.057337449880758,-0.311676405763001,-0.948456764924911, + -0.167285210491163,0.516195511070583,0.839974911947675, + 0.763325168891534,0.512093536284904,-0.393820894102804, + 0.457619183693223,-0.672231259407514,0.581970632069466, + -0.246793802164352,-0.050216662420050,-0.967766038889902, + 0.927994874653326,0.242210812920042,-0.283124415622830, + 0.613792300977422,0.763214386431347,0.201898022786412, + 0.720951430921191,-0.550579081664088,-0.420822657525251, + -0.566617724460163,-0.603447657535153,-0.561066198360694, + 0.575968738378302,-0.783648913166458,-0.232710965156210, + -0.532150073708023,-0.619733926203769,0.576841537828723, + -0.911227494753416,-0.409216343893830,-0.046972722888692, + 0.243129633174557,0.820980315213879,-0.516603623200345, + 0.429059425848317,0.332137825141317,-0.839995520345857, + -0.862659530206915,0.023610632091113,0.505233681572638, + 0.837291268298631,-0.163164674031590,0.521843483411485, + 0.803588479073049,0.456397841392963,0.382029536388100, + 0.303630079812031,0.840160692576492,0.449375995445604, + 0.558311152322438,-0.044011396373360,-0.828463429598227, + 0.238930415896487,-0.057120162540996,-0.969355220438215, + 0.246985899213630,-0.326331770359038,0.912417416122670, + 0.837050631211904,-0.547095262685976,0.005745810152941, + -0.554571420346131,0.053288087401785,-0.830428154313384, + 0.751372177673996,-0.530499886791399,0.392440722570616, + 0.204389904673926,0.615196807070163,0.761418186963024, + 0.106700970850229,-0.867025439314806,0.486705034287282, + 0.717231391359855,0.239339763160166,-0.654442976139587, + 0.069544882069961,0.220289919002015,-0.972952137036535, + 0.648780744604385,-0.754349357811800,0.100202753452702, + -0.727376323458570,-0.175112683983955,-0.663520332755394, + 0.726060483848279,0.676802250037960,-0.121551997669954, + 0.580156273414571,-0.371836855429485,0.724676514978945, + -0.060890718603115,0.804268669172008,0.591138078773718, + -0.386606299473394,0.736073310034347,0.555636258232458, + 0.171832268210408,-0.620770257189966,0.764930035617617, + 0.030029178348917,0.973024956515624,0.228737147060675, + 0.197806050466708,-0.977284832169067,0.076073143822506, + 0.941717594278340,-0.292439497987513,0.166274209195007, + 0.103620708501302,0.975442422157789,-0.194357479466658, + -0.999930437744010,0.003907201094968,0.011128946611211, + -0.453284936431437,-0.867544703290094,0.204692340349242, + -0.939310554852217,-0.109134901287686,-0.325246452500478, + 0.453912788215515,0.373549749748161,0.808964625405526, + 0.446853673336740,-0.414239447718517,-0.792923372451158 + }; + + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(); + + + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 50; c++) + { + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } + + return pointshell; + } + static vnl_matrix_fixed* DistributePointShell2() + { + double coords[3*100] = { + -0.6783406728914600,-0.6757825732021540,-0.2883952934037510, + -0.7868810762760640,0.3417432912343670,0.5138381989448860, + 0.1812675472397420,0.9341812435603770,0.3073230881298610, + 0.4392152776431420,0.8556891913232610,0.2736529695387940, + -0.6296241987663400,0.2128741188301860,0.7471666332620290, + 0.6170474427091470,0.0980582575477010,-0.7807925662894150, + 0.3935013484893500,0.9192019551005550,0.0149818048438275, + -0.3269299998796330,-0.4401580515926610,0.8362880274145110, + -0.2869929508839660,0.8309767335503890,0.4765634421992920, + 0.5088992607891730,-0.7072946217461350,-0.4906687889169470, + 0.5806843974003410,0.3583450335309360,-0.7310228912691540, + 0.9491724956627390,-0.1834420594707910,0.2557744793650880, + 0.0153560310858227,0.1752309003794950,0.9844076004691760, + -0.0479773456177447,0.9905464575577180,-0.1285141615828030, + 0.0693843127112566,-0.5942844228507240,-0.8012564145806050, + -0.3165721030432440,-0.4164032785066600,-0.8522854059666170, + 0.4896581521634270,0.7211168510820520,0.4901279232051600, + 0.7776461071669160,-0.0320557656217032,-0.6278845115931320, + 0.2300492326525960,0.8027977937856420,0.5500845869944510, + -0.3766021271868230,-0.7564724591162180,0.5347151170455350, + -0.1790056555604940,-0.2983809560973960,0.9375104161105410, + -0.5841988205464850,-0.8089448753434100,-0.0657261494972090, + -0.8551587253793000,0.4448943753338720,0.2660311057074570, + -0.7752975795230930,0.6190258715864510,0.1253819504245550, + -0.6764680634440770,-0.5064314530534920,0.5347131403830920, + 0.7501893689724760,0.6048830482657770,-0.2670812771449510, + -0.5138286280086930,-0.4945630265573110,-0.7009904092076970, + 0.5804145400895790,0.7956021922609330,-0.1735975613947330, + -0.1755232810907650,0.3977545839146920,0.9005458726627870, + 0.0397560432054666,0.4921914390519250,-0.8695786590945290, + 0.5538585716719580,-0.8081611673456340,0.2002903147434720, + 0.8992305597521990,0.1140934067118160,-0.4223352873637700, + 0.7698402757004470,0.6378303091348330,0.0227694237612964, + -0.4412960658520300,0.8971893864056890,0.0175780313033856, + -0.0811198993955311,0.2753962213738170,-0.9579021260938310, + -0.8572077886102190,-0.3790625619618600,0.3485776545690900, + 0.6857756541322800,0.5415157578159610,0.4862843162558790, + 0.8549241931498690,-0.2861863354061220,0.4326684705335710, + -0.4182775751481730,0.7970464185340600,-0.4356155149098700, + 0.3499190445152290,0.8866592889390710,-0.3023110444949170, + -0.0132033510852791,-0.8749575867614390,-0.4840195170535130, + 0.9116379197252770,-0.0091996476760664,0.4108913114214080, + -0.6490542475593910,-0.0530061128719349,-0.7588932307797450, + 0.2036777677589340,-0.7982257583158190,0.5668782988277740, + 0.3791318665509280,0.1705982429677800,-0.9094807679450480, + -0.1470179365181320,0.9220511216311460,-0.3580606868125770, + -0.3344979114418210,-0.6343147268032640,-0.6969619606560740, + -0.6076879381877640,0.5109764367904180,0.6079625406438060, + -0.5844013508588990,-0.7109052658706510,0.3912655927521240, + 0.9862110505381910,-0.1637207304543020,0.0241513191330477, + -0.2051748270057740,0.7136488133907960,0.6697825479281010, + 0.9069081158736650,-0.4209955960690930,0.0167444752950723, + -0.1319432828456750,0.9392959075033450,0.3167241201098720, + 0.7549548594926640,-0.1430122887152190,0.6399926916808070, + 0.2084074643614400,-0.1965342739298880,-0.9580921709153480, + -0.4579812060622150,-0.5603838600979070,0.6900892291838540, + -0.5044451924143650,-0.2283097986021220,-0.8327122454439420, + -0.1632507891313170,0.0595367888203028,-0.9847865507941140, + 0.6304967444231040,-0.7732039721298140,-0.0680402289424677, + -0.4189905487906070,0.2950674433427220,0.8587095690065030, + -0.1064870135377420,-0.0503578524476393,0.9930380670672570, + -0.9594694024759230,-0.2706424081220130,-0.0785566842376365, + 0.6572248348109010,-0.6577047684772120,0.3680760166461810, + 0.8938413333977800,-0.1605095289995250,-0.4186697526810690, + 0.9676575561375490,0.2066292219530930,-0.1447177207012450, + 0.8845432302365500,0.4553528053106210,-0.1011785379338700, + 0.3127824838603270,-0.9329319353982300,0.1783399049687880, + 0.0538977574368990,0.9943600559842480,0.0913406306430770, + -0.8270410405970430,-0.3169506321051900,-0.4642686872666290, + -0.3836295436457290,0.5570493630789800,0.7365625433970090, + -0.4341709114900190,0.8573912849439030,0.2763617269416430, + -0.6794088494430530,-0.3329865853053170,-0.6538528498868610, + -0.3373613680825300,0.6537103259033100,-0.6773847629913670, + 0.3577142489860180,-0.2395141136991300,0.9025926575212580, + 0.0475306676831556,-0.6921666442661880,0.7201709326228570, + -0.9238533114270850,-0.2442810637733990,-0.2946554273162900, + -0.7702042751707540,0.6239784781621260,-0.1320463301238260, + -0.1058068553327490,-0.9342834914303710,0.3404691865723970, + -0.6712641876558270,0.6601081560713440,0.3371373795040410, + -0.9902933383503500,-0.0392378960032633,-0.1333397597723740, + 0.2680611017833540,0.2096519795061000,0.9403134015847410, + -0.2193780563994170,0.9713963546921800,0.0908976922763060, + 0.4259546539557210,-0.0086224931160314,0.9047034239937000, + -0.7126278602910880,0.4094408405402170,-0.5696663328955520, + -0.2175209712545230,0.4840278946263750,-0.8475857622022950, + 0.5687366838665980,-0.5871979617261380,0.5759662647838790, + 0.0944273658455115,0.8302981465345910,-0.5492617412861550, + 0.2132739207069970,0.6628352636620030,-0.7177490146230690, + 0.9572113632369580,-0.2441349912405500,-0.1553850447823740, + -0.8451592214984760,-0.4858715283504990,-0.2227885729889170, + -0.8457073503037060,0.4544256488253640,-0.2797792117580030, + -0.4568229734634650,0.4521433068383050,-0.7660804141846460, + 0.2161513748810380,0.9712225012944180,-0.1000271768893380, + -0.9727568289959310,0.0233660996838811,0.2306473000651490, + 0.0955550598977780,0.4497094877292240,0.8880487639618950, + -0.5803054956345510,0.2185728470394220,-0.7845198801008280, + 0.0802960854964209,0.7085380275275620,0.7010894395163160, + -0.8170365471147090,-0.1054124160886850,-0.5668681532889450, + -0.7903491223400260,-0.2661789011279690,0.5518125201648250, + -0.4240807031724980,0.0532021972358502,0.9040603317290260 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(); - template<> class PointShell<1002, vnl_matrix_fixed > - { - public: - static vnl_matrix_fixed* DistributePointShell() + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 100; c++) { - double coords[3*1002] = { - 0.9756767549555488,0.9910244201339067,0.9977154378498742, - 0.9927800993607139,0.9738192119472443,0.9397937974509784, - 0.8915721200771204,0.8318778673129345,0.7646073555341725, - 0.693869346809198,0.6231965669156312,0.9833704607135893, - 0.9964241736681655,0.9989802553190876,0.987902775761947, - 0.9610864540427623,0.9183225885811028,0.8616492668438125, - 0.7948923552800862,0.7226196323725681,0.6490709211350905, - 0.9817040172417226,0.9905693687720445,0.9870396762453547, - 0.9681598062324672,0.9325589150767597,0.881205326354676, - 0.8173592116492303,0.7456638277324369,0.6708930871960926, - 0.9679134019101711,0.9705588332310378,0.959200825309353, - 0.9315264271335991,0.8872988802116832,0.8287690756632178, - 0.7601362175694236,0.6863342915062906,0.9399233672993689, - 0.934650496070032,0.9144882783890762,0.8781852416959071, - 0.8267930935417315,0.7635949206829796,0.6931818659696647, - 0.8971014254962764,0.8830745457598012,0.8543282347786828, - 0.8108509720355672,0.754782849204541,0.6899186612252973, - 0.8407280774774689,0.8182890571891552,0.782394344826989, - 0.7341199823031558,0.6762337155773353,0.7738549713477869, - 0.7444263912611687,0.7036087793266443,0.6531781708866408, - 0.7005607434301688,0.6661985543964391,0.6228579759074076, - 0.6249824933683414,0.5878380796842572,0.5505632701289798, - 0.4375940376503738,0.3812939184075813,0.3153040621970065, - 0.2399906033000567,0.1569517536476641,0.06907711216819173, - -0.01984099037382634,-0.1058738447453135,-0.1857690950088067, - -0.2574501777461976,-0.3200730131503601,0.4806956770236153, - 0.4221182950629059,0.3527542025586833,0.2732412963568581, - 0.1857299193159225,0.09380763985613347,0.001855404825389049, - -0.08593912303271299,-0.1664330628904374,-0.2378914640002027, - 0.5232435944036425,0.4619857831524665,0.3889403678268736, - 0.305177254463085,0.2135250052622625,0.1182658918935892, - 0.02420694871807206,-0.06444621903648747,-0.1448539951504302, - 0.5629325029626137,0.4984853033494325,0.4215263456365218, - 0.3337322884960374,0.2386638182445053,0.1411593054699449, - 0.04617547921974115,-0.04233031957129997,0.5971534158422009, - 0.5290500940108692,0.4482053228282282,0.3570208135159443, - 0.2597018771197477,0.1613609902081595,0.06677517278138323, - 0.6235168560971456,0.5515679242489461,0.4673132571654228, - 0.3738575901923395,0.2758011201251887,0.1781713819192711, - 0.6404616222418184,0.5649656062523414,0.4782876117785159, - 0.3840417218310146,0.2868761951248767,0.6476575150457713, - 0.5694506961858633,0.481712063543859,0.388259258354853, - 0.6459894362878276,0.566293293292668,0.4789651252338281, - 0.6371661773752719,0.5573232120043787,0.3200724178002418, - 0.4063802566221164,0.4973180497018747,0.5897273522875156, - 0.6793811951363423,0.7616224484252742,0.8323587928990375, - 0.889001584581435,0.9308933612987835,0.9590813334864968, - 0.3615817483188572,0.4535168742898277,0.5491779429163389, - 0.64449992308253,0.7344437631005388,0.8139835008962493, - 0.8793283338489147,0.9287763706314454,0.9627864725173401, - 0.4036036036586492,0.499949320334643,0.5984781165037405, - 0.6942590478190055,0.7817280923310203,0.8559922020830166, - 0.9140795130247613,0.9554674311422222,0.4441835036049274, - 0.5429866860840018,0.6418227066741695,0.7351609508563529, - 0.8174230627001258,0.8844224346157006,0.9343673632346869, - 0.4809905907165384,0.5797158369815773,0.6759621154318279, - 0.7640818148143264,0.8390728924802671,0.897874775015538, - 0.5117469206751248,0.6076796078041039,0.6986831899155831, - 0.7795497616193484,0.8462988042859838,0.5347729120192694, - 0.6255452713743446,0.7094340284155564,0.7820975288082114, - 0.5493993272212266,0.633404689923654,0.7093243648499448, - 0.5560356639783846,0.6325607438661257,0.5558948726075613, - 0.2502538949373057,0.2834596649308375,0.3171352000240629, - 0.3497321770767574,0.3793963897789465,0.4043068999720242, - 0.4231100429674418,0.4352503773152589,0.4410301813437042, - 0.4413950384816501,0.3401627625801983,0.3789979847088327, - 0.4171897539368579,0.4525063773118708,0.4825397797856335, - 0.5052684266816663,0.5196090830694199,0.5256607773912181, - 0.5245227828309349,0.5178400854028183,0.4357529867703999, - 0.479500221024681,0.5208717223808415,0.5569598687552583, - 0.5850086433327374,0.6031754713474787,0.611055499882272, - 0.6096654752354952,0.6009463532173235,0.5339523560360242, - 0.5809954188619362,0.6233304915365264,0.6575940739282847, - 0.6811006607903708,0.6926539121832439,0.6928333109300957, - 0.6836092937706954,0.6305067000562991,0.6783846661286849, - 0.7188806066405239,0.7486166997908829,0.7654898954879897, - 0.7692993175005894,0.7616477696596397,0.7205836671095895, - 0.7663950141411601,0.8022874547238388,0.8253952737866894, - 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0.3620182543235557,0.4726965405256068,0.5791764634315589, - 0.6757048258462731,0.7580000771779366,0.3888887347419664, - 0.4960228623929952,0.5966697046150125,0.685875099677583, - 0.4091542831822379,0.5106167801856609,0.6039998362037971, - 0.422484479771868,0.5169744155067602,0.4294387727293252 }; + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } + + return pointshell; + } + + static vnl_matrix_fixed* DistributePointShell3() + { + double coords[3*150] = { + -0.5818137157755120,-0.5030550053652260,0.6390840803153230, + 0.9670851419246870,0.1662861674810110,0.1926012429165080, + 0.0578846316476645,-0.7976809936025330,0.6002952622370840, + 0.4660628327321890,-0.1511747542980830,0.8717405747173640, + 0.6902368719591830,0.3748091607024440,-0.6189435787222700, + -0.1997955747625600,-0.1526408912355860,0.9678752433181160, + 0.9511193914166630,0.1151598714233260,-0.2865486124289540, + 0.0822444520102396,-0.5510970245321980,0.8303781787025070, + 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-0.8295547427688960,-0.1162092353369240,0.5461999106298320, + -0.0852410700430401,0.9961766497246490,0.0191322377491922, + 0.3131894593955590,-0.5541595443573950,0.7712454615238390, + -0.2053809775103630,-0.8866791538596230,0.4142689128907330, + -0.2803794157477670,0.8920364641234400,0.3544831870471280, + 0.3607197436800900,-0.9212300461377630,-0.1456587402540090, + 0.5099563266151200,0.8025819147395540,-0.3095267598741700, + 0.3434662076553160,-0.3991341139236100,0.8501311212402990, + -0.8525024407450160,0.5081350695533460,0.1226309080689130, + -0.7808884875619300,-0.2500741633167730,-0.5724299807266000, + -0.5053813675827790,-0.8611316666645480,0.0551536577907309, + -0.9210719657807660,0.3672285791438610,0.1294975077471940, + 0.6652607437466560,0.6063117536090580,-0.4356767153121150, + 0.3394557649489950,-0.6705912128459400,-0.6596038272301810 + }; + vnl_matrix_fixed *pointshell + = new vnl_matrix_fixed(); - vnl_matrix_fixed *pointshell - = new vnl_matrix_fixed(coords); + // List sorted for each row [x,y,z] + // pointshell need [x...x + // y...y + // z...z] + int i=0; + for(int c =0; c < 150; c++) + { + for(int r=0; r<3; r++){ + pointshell->put(r,c,coords[i++]); + } + } - return pointshell; - } - }; + return pointshell; + } +}; } #endif //__itkPointShell_txx__