diff --git a/Plugins/org.mitk.gui.qt.fit.inspector/CMakeLists.txt b/Plugins/org.mitk.gui.qt.fit.inspector/CMakeLists.txt index a3af7cd4ef..44f462019a 100644 --- a/Plugins/org.mitk.gui.qt.fit.inspector/CMakeLists.txt +++ b/Plugins/org.mitk.gui.qt.fit.inspector/CMakeLists.txt @@ -1,7 +1,7 @@ project(org_mitk_gui_qt_fit_inspector) mitk_create_plugin( EXPORT_DIRECTIVE MODELFIT_INSPECTOR_EXPORT EXPORTED_INCLUDE_SUFFIXES src - MODULE_DEPENDS MitkQtWidgetsExt MitkModelFit MitkModelFitUI + MODULE_DEPENDS MitkModelFit MitkModelFitUI MitkChart ) diff --git a/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.cpp b/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.cpp index a851bc57c8..f4a2ef8a8b 100644 --- a/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.cpp +++ b/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.cpp @@ -1,909 +1,862 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ - // Blueberry #include -#include #include +#include // mitk #include // Qt -#include -#include #include -#include -#include "QmitkPlotWidget.h" -#include "mitkNodePredicateFunction.h" -#include "mitkScalarListLookupTableProperty.h" -#include "mitkModelFitConstants.h" #include "mitkExtractTimeGrid.h" -#include "mitkModelGenerator.h" +#include "mitkModelFitConstants.h" #include "mitkModelFitException.h" #include "mitkModelFitParameterValueExtraction.h" +#include "mitkModelGenerator.h" +#include "mitkNodePredicateFunction.h" +#include "mitkScalarListLookupTableProperty.h" #include "mitkTimeGridHelper.h" #include "mitkModelFitPlotDataHelper.h" #include "ModelFitInspectorView.h" const std::string ModelFitInspectorView::VIEW_ID = "org.mitk.gui.gt.fit.inspector"; const unsigned int ModelFitInspectorView::INTERPOLATION_STEPS = 10; const std::string DEFAULT_X_AXIS = "Time [s]"; -ModelFitInspectorView::ModelFitInspectorView() : - m_renderWindowPart(nullptr), - m_internalUpdateFlag(false), - m_currentFit(nullptr), - m_currentModelParameterizer(nullptr), - m_currentModelProviderService(nullptr), - m_currentSelectedTimeStep(0), - m_currentSelectedNode(nullptr) +ModelFitInspectorView::ModelFitInspectorView() + : m_renderWindowPart(nullptr), + m_internalUpdateFlag(false), + m_currentFit(nullptr), + m_currentModelParameterizer(nullptr), + m_currentModelProviderService(nullptr), + m_currentSelectedTimeStep(0), + m_currentSelectedNode(nullptr) { m_currentSelectedPosition.Fill(0.0); m_modelfitList.clear(); } -ModelFitInspectorView::~ModelFitInspectorView() -{ -} +ModelFitInspectorView::~ModelFitInspectorView() {} -void ModelFitInspectorView::RenderWindowPartActivated(mitk::IRenderWindowPart* renderWindowPart) +void ModelFitInspectorView::RenderWindowPartActivated(mitk::IRenderWindowPart *renderWindowPart) { if (m_renderWindowPart != renderWindowPart) { m_renderWindowPart = renderWindowPart; } this->m_SliceChangeListener.RenderWindowPartActivated(renderWindowPart); } -void ModelFitInspectorView::RenderWindowPartDeactivated( - mitk::IRenderWindowPart* renderWindowPart) +void ModelFitInspectorView::RenderWindowPartDeactivated(mitk::IRenderWindowPart *renderWindowPart) { m_renderWindowPart = nullptr; this->m_SliceChangeListener.RenderWindowPartDeactivated(renderWindowPart); } -void ModelFitInspectorView::CreateQtPartControl(QWidget* parent) +void ModelFitInspectorView::CreateQtPartControl(QWidget *parent) { m_Controls.setupUi(parent); m_SelectionServiceConnector = std::make_unique(); m_SelectionServiceConnector->AddPostSelectionListener(this->GetSite()->GetWorkbenchWindow()->GetSelectionService()); m_Controls.inputNodeSelector->SetDataStorage(GetDataStorage()); m_Controls.inputNodeSelector->SetEmptyInfo(QString("Please select input data to be viewed.")); m_Controls.inputNodeSelector->SetInvalidInfo(QString("No input data is selected")); m_Controls.inputNodeSelector->SetPopUpTitel(QString("Choose 3D+t input data that should be viewed!")); m_Controls.inputNodeSelector->SetSelectionIsOptional(false); m_Controls.inputNodeSelector->SetSelectOnlyVisibleNodes(true); auto predicate = mitk::NodePredicateFunction::New([](const mitk::DataNode *node) { - bool isModelFitNode = node->GetData() && node->GetData()->GetProperty(mitk::ModelFitConstants::FIT_UID_PROPERTY_NAME().c_str()).IsNotNull(); + bool isModelFitNode = + node->GetData() && + node->GetData()->GetProperty(mitk::ModelFitConstants::FIT_UID_PROPERTY_NAME().c_str()).IsNotNull(); return isModelFitNode || (node && node->GetData() && node->GetData()->GetTimeSteps() > 1); }); m_Controls.inputNodeSelector->SetNodePredicate(predicate); - connect(m_SelectionServiceConnector.get(), &QmitkSelectionServiceConnector::ServiceSelectionChanged, m_Controls.inputNodeSelector, &QmitkSingleNodeSelectionWidget::SetCurrentSelection); - connect(m_Controls.inputNodeSelector, SIGNAL(CurrentSelectionChanged(QList)), this, SLOT(OnInputChanged(const QList&))); + connect(m_SelectionServiceConnector.get(), + &QmitkSelectionServiceConnector::ServiceSelectionChanged, + m_Controls.inputNodeSelector, + &QmitkSingleNodeSelectionWidget::SetCurrentSelection); + connect(m_Controls.inputNodeSelector, + SIGNAL(CurrentSelectionChanged(QList)), + this, + SLOT(OnInputChanged(const QList &))); this->m_SliceChangeListener.RenderWindowPartActivated(this->GetRenderWindowPart()); connect(&m_SliceChangeListener, SIGNAL(SliceChanged()), this, SLOT(OnSliceChanged())); - connect(m_Controls.cmbFit, SIGNAL(currentIndexChanged(int)), this, - SLOT(OnFitSelectionChanged(int))); + connect(m_Controls.cmbFit, SIGNAL(currentIndexChanged(int)), this, SLOT(OnFitSelectionChanged(int))); - connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.sbFixMin, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.sbFixMax, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.labelFixMin, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.labelFixMax, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.btnScaleToData, - SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.sbFixMin_y, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.sbFixMax_y, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.labelFixMin, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.labelFixMax, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), m_Controls.btnScaleToData, SLOT(setEnabled(bool))); connect(m_Controls.radioScaleFixed, SIGNAL(toggled(bool)), this, SLOT(OnScaleFixedYChecked(bool))); connect(m_Controls.btnScaleToData, SIGNAL(clicked()), this, SLOT(OnScaleToDataYClicked())); - connect(m_Controls.sbFixMax, SIGNAL(valueChanged(double)), this, - SLOT(OnFixedScalingYChanged(double))); - connect(m_Controls.sbFixMin, SIGNAL(valueChanged(double)), this, - SLOT(OnFixedScalingYChanged(double))); - - connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.sbFixMin_x, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.sbFixMax_x, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.labelFixMin_x, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.labelFixMax_x, - SLOT(setEnabled(bool))); - connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.btnScaleToData_x, - SLOT(setEnabled(bool))); + connect(m_Controls.sbFixMax_y, SIGNAL(valueChanged(double)), this, SLOT(OnFixedScalingYChanged(double))); + connect(m_Controls.sbFixMin_y, SIGNAL(valueChanged(double)), this, SLOT(OnFixedScalingYChanged(double))); + + connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.sbFixMin_x, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.sbFixMax_x, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.labelFixMin_x, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.labelFixMax_x, SLOT(setEnabled(bool))); + connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), m_Controls.btnScaleToData_x, SLOT(setEnabled(bool))); connect(m_Controls.radioScaleFixed_x, SIGNAL(toggled(bool)), this, SLOT(OnScaleFixedXChecked(bool))); connect(m_Controls.btnScaleToData_x, SIGNAL(clicked()), this, SLOT(OnScaleToDataXClicked())); - connect(m_Controls.sbFixMax_x, SIGNAL(valueChanged(double)), this, - SLOT(OnFixedScalingXChanged(double))); - connect(m_Controls.sbFixMin_x, SIGNAL(valueChanged(double)), this, - SLOT(OnFixedScalingXChanged(double))); + connect(m_Controls.sbFixMax_x, SIGNAL(valueChanged(double)), this, SLOT(OnFixedScalingXChanged(double))); + connect(m_Controls.sbFixMin_x, SIGNAL(valueChanged(double)), this, SLOT(OnFixedScalingXChanged(double))); connect(m_Controls.btnFullPlot, SIGNAL(clicked(bool)), this, SLOT(OnFullPlotClicked(bool))); this->EnsureBookmarkPointSet(); m_Controls.inspectionPositionWidget->SetPositionBookmarkNode(m_PositionBookmarksNode.Lock()); - connect(m_Controls.inspectionPositionWidget, SIGNAL(PositionBookmarksChanged()), this, SLOT(OnPositionBookmarksChanged())); - - // For some reason this needs to be called to set the plot widget's minimum width to an - // acceptable level (since Qwt 6). - // Otherwise it tries to keep both axes equal in length, resulting in a minimum width of - // 400-500px which is way too much. - m_Controls.widgetPlot->GetPlot()->updateAxes(); + connect( + m_Controls.inspectionPositionWidget, SIGNAL(PositionBookmarksChanged()), this, SLOT(OnPositionBookmarksChanged())); m_Controls.cmbFit->clear(); - mitk::IRenderWindowPart* renderWindowPart = GetRenderWindowPart(); + mitk::IRenderWindowPart *renderWindowPart = GetRenderWindowPart(); RenderWindowPartActivated(renderWindowPart); } -void ModelFitInspectorView::SetFocus() -{ -} +void ModelFitInspectorView::SetFocus() {} -void ModelFitInspectorView::NodeRemoved(const mitk::DataNode* node) +void ModelFitInspectorView::NodeRemoved(const mitk::DataNode *node) { if (node == this->m_currentSelectedNode) { QmitkSingleNodeSelectionWidget::NodeList emptylist; this->m_Controls.inputNodeSelector->SetCurrentSelection(emptylist); } } void ModelFitInspectorView::OnScaleFixedYChecked(bool checked) { - m_Controls.widgetPlot->GetPlot()->setAxisAutoScale(QwtPlot::yLeft, !checked); - - if (checked) + if (checked) { OnScaleToDataYClicked(); } - - m_Controls.widgetPlot->GetPlot()->replot(); + m_Controls.chartWidget->Show(); }; void ModelFitInspectorView::OnScaleFixedXChecked(bool checked) { - m_Controls.widgetPlot->GetPlot()->setAxisAutoScale(QwtPlot::xBottom, !checked); - if (checked) { OnScaleToDataXClicked(); } - m_Controls.widgetPlot->GetPlot()->replot(); + m_Controls.chartWidget->Show(); }; void ModelFitInspectorView::OnScaleToDataYClicked() { auto minmax = this->m_PlotCurves.GetYMinMax(); auto min = minmax.first - abs(minmax.first) * 0.01; auto max = minmax.second + abs(minmax.second) * 0.01; - m_Controls.sbFixMin->setValue(min); - m_Controls.sbFixMax->setValue(max); + m_Controls.sbFixMin_y->setValue(min); + m_Controls.sbFixMax_y->setValue(max); }; void ModelFitInspectorView::OnScaleToDataXClicked() { auto minmax = this->m_PlotCurves.GetXMinMax(); auto min = minmax.first - abs(minmax.first) * 0.01; auto max = minmax.second + abs(minmax.second) * 0.01; m_Controls.sbFixMin_x->setValue(min); m_Controls.sbFixMax_x->setValue(max); }; void ModelFitInspectorView::OnFixedScalingYChanged(double /*value*/) { - m_Controls.widgetPlot->GetPlot()->setAxisScale(QwtPlot::yLeft, m_Controls.sbFixMin->value(), - m_Controls.sbFixMax->value()); - m_Controls.widgetPlot->GetPlot()->replot(); + m_Controls.chartWidget->UpdateMinMaxValueYView(m_Controls.sbFixMin_y->value(), m_Controls.sbFixMax_y->value()); }; void ModelFitInspectorView::OnFixedScalingXChanged(double /*value*/) { - m_Controls.widgetPlot->GetPlot()->setAxisScale(QwtPlot::xBottom, m_Controls.sbFixMin_x->value(), - m_Controls.sbFixMax_x->value()); - m_Controls.widgetPlot->GetPlot()->replot(); + m_Controls.chartWidget->UpdateMinMaxValueXView(m_Controls.sbFixMin_x->value(), m_Controls.sbFixMax_x->value()); }; void ModelFitInspectorView::OnFullPlotClicked(bool checked) { m_Controls.tabWidget->setVisible(!checked); + m_Controls.chartWidget->Show(); }; int ModelFitInspectorView::ActualizeFitSelectionWidget() { mitk::NodeUIDType selectedFitUD = ""; bool isModelFitNode = this->m_currentSelectedNode->GetData()->GetPropertyList()->GetStringProperty( mitk::ModelFitConstants::FIT_UID_PROPERTY_NAME().c_str(), selectedFitUD); mitk::DataStorage::Pointer storage = this->GetDataStorage(); - mitk::modelFit::NodeUIDSetType fitUIDs = mitk::modelFit::GetFitUIDsOfNode( - this->m_currentSelectedNode, storage); + mitk::modelFit::NodeUIDSetType fitUIDs = mitk::modelFit::GetFitUIDsOfNode(this->m_currentSelectedNode, storage); this->m_modelfitList.clear(); this->m_Controls.cmbFit->clear(); - for (const auto & fitUID : fitUIDs) + for (const auto &fitUID : fitUIDs) { - mitk::modelFit::ModelFitInfo::ConstPointer info = mitk::modelFit::CreateFitInfoFromNode(fitUID, - storage).GetPointer(); + mitk::modelFit::ModelFitInfo::ConstPointer info = + mitk::modelFit::CreateFitInfoFromNode(fitUID, storage).GetPointer(); if (info.IsNotNull()) { this->m_modelfitList.insert(std::make_pair(info->uid, info)); std::ostringstream nameStrm; if (info->fitName.empty()) { nameStrm << info->uid; } else { nameStrm << info->fitName; } nameStrm << " (" << info->modelName << ")"; QVariant data(info->uid.c_str()); m_Controls.cmbFit->addItem(QString::fromStdString(nameStrm.str()), data); } else { - MITK_ERROR << - "Was not able to extract model fit information from storage. Node properties in storage may be invalid. Failed fit UID:" - << fitUID; + MITK_ERROR << "Was not able to extract model fit information from storage. Node properties in storage may be " + "invalid. Failed fit UID:" + << fitUID; } } int cmbIndex = 0; if (m_modelfitList.empty()) { cmbIndex = -1; }; if (isModelFitNode) { - //model was selected, thus select this one in combobox + // model was selected, thus select this one in combobox QVariant data(selectedFitUD.c_str()); cmbIndex = m_Controls.cmbFit->findData(data); if (cmbIndex == -1) { - MITK_WARN << - "Model fit Inspector in invalid state. Selected fit seems to be not avaible in plugin selection. Failed fit UID:" - << selectedFitUD; + MITK_WARN << "Model fit Inspector in invalid state. Selected fit seems to be not avaible in plugin selection. " + "Failed fit UID:" + << selectedFitUD; } }; m_Controls.cmbFit->setCurrentIndex(cmbIndex); return cmbIndex; } -void ModelFitInspectorView::OnInputChanged(const QList& nodes) +void ModelFitInspectorView::OnInputChanged(const QList &nodes) { if (nodes.size() > 0) { if (nodes.front() != this->m_currentSelectedNode) { - m_internalUpdateFlag = true; this->m_currentSelectedNode = nodes.front(); mitk::NodeUIDType selectedFitUD = ""; bool isModelFitNode = this->m_currentSelectedNode->GetData()->GetPropertyList()->GetStringProperty( - mitk::ModelFitConstants::FIT_UID_PROPERTY_NAME().c_str(), selectedFitUD); + mitk::ModelFitConstants::FIT_UID_PROPERTY_NAME().c_str(), selectedFitUD); if (isModelFitNode) { this->m_currentSelectedNode = this->GetParentNode(this->m_currentSelectedNode); } auto cmbIndex = ActualizeFitSelectionWidget(); m_internalUpdateFlag = false; m_selectedNodeTime.Modified(); if (cmbIndex == -1) { - //only raw 4D data selected. Just update plots for current position + // only raw 4D data selected. Just update plots for current position m_currentFit = nullptr; m_currentFitTime.Modified(); OnSliceChanged(); m_Controls.plotDataWidget->SetXName(DEFAULT_X_AXIS); } else { - //refresh fit selection (and implicitly update plots) + // refresh fit selection (and implicitly update plots) OnFitSelectionChanged(cmbIndex); } } } else { if (this->m_currentSelectedNode.IsNotNull()) { m_internalUpdateFlag = true; this->m_currentSelectedNode = nullptr; this->m_currentFit = nullptr; this->m_modelfitList.clear(); this->m_Controls.cmbFit->clear(); m_internalUpdateFlag = false; m_selectedNodeTime.Modified(); OnFitSelectionChanged(0); RefreshPlotData(); m_Controls.plotDataWidget->SetPlotData(&(this->m_PlotCurves)); m_Controls.fitParametersWidget->setFits(QmitkFitParameterModel::FitVectorType()); RenderPlot(); } } - } -mitk::DataNode::ConstPointer -ModelFitInspectorView::GetParentNode(mitk::DataNode::ConstPointer node) +mitk::DataNode::ConstPointer ModelFitInspectorView::GetParentNode(mitk::DataNode::ConstPointer node) { if (node.IsNotNull()) { - mitk::DataStorage::SetOfObjects::ConstPointer parentNodeList = - GetDataStorage()->GetSources(node); + mitk::DataStorage::SetOfObjects::ConstPointer parentNodeList = GetDataStorage()->GetSources(node); if (parentNodeList->size() > 0) { return parentNodeList->front().GetPointer(); } } return mitk::DataNode::ConstPointer(); } - void ModelFitInspectorView::ValidateAndSetCurrentPosition() { mitk::Point3D currentSelectedPosition = GetRenderWindowPart()->GetSelectedPosition(nullptr); - unsigned int currentSelectedTimestep = m_renderWindowPart->GetTimeNavigationController()->GetTime()-> - GetPos(); + unsigned int currentSelectedTimestep = m_renderWindowPart->GetTimeNavigationController()->GetTime()->GetPos(); - if (m_currentSelectedPosition != currentSelectedPosition - || m_currentSelectedTimeStep != currentSelectedTimestep - || m_selectedNodeTime > m_currentPositionTime) + if (m_currentSelectedPosition != currentSelectedPosition || m_currentSelectedTimeStep != currentSelectedTimestep || + m_selectedNodeTime > m_currentPositionTime) { - //the current position has been changed or the selected node has been changed since the last position validation -> check position + // the current position has been changed or the selected node has been changed since the last position validation -> + // check position m_currentSelectedPosition = currentSelectedPosition; m_currentSelectedTimeStep = currentSelectedTimestep; m_currentPositionTime.Modified(); m_validSelectedPosition = false; mitk::Image::Pointer inputImage = this->GetCurrentInputImage(); if (inputImage.IsNull()) { return; } - mitk::BaseGeometry::Pointer geometry = inputImage->GetTimeGeometry()->GetGeometryForTimeStep( - m_currentSelectedTimeStep); + mitk::BaseGeometry::Pointer geometry = + inputImage->GetTimeGeometry()->GetGeometryForTimeStep(m_currentSelectedTimeStep); // check for invalid time step if (geometry.IsNull()) { geometry = inputImage->GetTimeGeometry()->GetGeometryForTimeStep(0); } if (geometry.IsNull()) { return; } m_validSelectedPosition = geometry->IsInside(m_currentSelectedPosition); - } } -mitk::Image::Pointer ModelFitInspectorView::GetCurrentInputImage() const +mitk::Image::Pointer ModelFitInspectorView::GetCurrentInputImage() const { mitk::Image::Pointer result = nullptr; if (this->m_currentFit.IsNotNull()) { result = m_currentFit->inputImage; } else if (this->m_currentSelectedNode.IsNotNull()) { - result = dynamic_cast(this->m_currentSelectedNode->GetData()); + result = dynamic_cast(this->m_currentSelectedNode->GetData()); if (result.IsNotNull() && result->GetTimeSteps() <= 1) { - //if the image is not dynamic, we can't use it. + // if the image is not dynamic, we can't use it. result = nullptr; } } return result; }; const mitk::ModelBase::TimeGridType ModelFitInspectorView::GetCurrentTimeGrid() const { if (m_currentModelProviderService && m_currentFit.IsNotNull()) { return m_currentModelProviderService->GetVariableGrid(m_currentFit); } else - { //fall back if there is no model provider we assume to use the normal time grid. + { // fall back if there is no model provider we assume to use the normal time grid. return ExtractTimeGrid(GetCurrentInputImage()); } }; void ModelFitInspectorView::OnSliceChanged() { ValidateAndSetCurrentPosition(); - m_Controls.widgetPlot->setEnabled(m_validSelectedPosition); - if (m_currentSelectedNode.IsNotNull()) { m_Controls.inspectionPositionWidget->SetCurrentPosition(m_currentSelectedPosition); if (RefreshPlotData()) { RenderPlot(); m_Controls.plotDataWidget->SetPlotData(&m_PlotCurves); RenderFitInfo(); } } } void ModelFitInspectorView::OnPositionBookmarksChanged() { - if (RefreshPlotData()) - { - RenderPlot(); - m_Controls.plotDataWidget->SetPlotData(&m_PlotCurves); - RenderFitInfo(); - } + if (RefreshPlotData()) + { + RenderPlot(); + m_Controls.plotDataWidget->SetPlotData(&m_PlotCurves); + RenderFitInfo(); + } } void ModelFitInspectorView::OnFitSelectionChanged(int index) { if (!m_internalUpdateFlag) { MITK_DEBUG << "selected fit index: " << index; std::string uid = ""; - if (m_Controls.cmbFit->count() > index) { uid = m_Controls.cmbFit->itemData(index).toString().toStdString(); } mitk::modelFit::ModelFitInfo::ConstPointer newFit = nullptr; ModelFitInfoListType::iterator finding = m_modelfitList.find(uid); if (finding != m_modelfitList.end()) { newFit = finding->second; } if (m_currentFit != newFit) { m_currentModelParameterizer = nullptr; m_currentModelProviderService = nullptr; if (newFit.IsNotNull()) { m_currentModelParameterizer = mitk::ModelGenerator::GenerateModelParameterizer(*newFit); m_currentModelProviderService = mitk::ModelGenerator::GetProviderService(newFit->functionClassID); } m_currentFit = newFit; m_currentFitTime.Modified(); auto name = m_currentFit->xAxisName; if (!m_currentFit->xAxisUnit.empty()) { name += " [" + m_currentFit->xAxisUnit + "]"; } m_Controls.plotDataWidget->SetXName(name); OnSliceChanged(); } } } -mitk::PlotDataCurveCollection::Pointer ModelFitInspectorView::RefreshPlotDataCurveCollection(const mitk::Point3D& position, - const mitk::Image* input, const mitk::modelFit::ModelFitInfo* fitInfo, - const mitk::ModelBase::TimeGridType& timeGrid, mitk::ModelParameterizerBase* parameterizer) +mitk::PlotDataCurveCollection::Pointer ModelFitInspectorView::RefreshPlotDataCurveCollection( + const mitk::Point3D &position, + const mitk::Image *input, + const mitk::modelFit::ModelFitInfo *fitInfo, + const mitk::ModelBase::TimeGridType &timeGrid, + mitk::ModelParameterizerBase *parameterizer) { mitk::PlotDataCurveCollection::Pointer result = mitk::PlotDataCurveCollection::New(); - //sample curve + // sample curve if (input) { result->InsertElement(mitk::MODEL_FIT_PLOT_SAMPLE_NAME(), GenerateImageSamplePlotData(position, input, timeGrid)); } - //model signal curve + // model signal curve if (fitInfo) { // Interpolate time grid (x values) so the curve looks smooth - const mitk::ModelBase::TimeGridType interpolatedTimeGrid = mitk::GenerateSupersampledTimeGrid(timeGrid, INTERPOLATION_STEPS); + const mitk::ModelBase::TimeGridType interpolatedTimeGrid = + mitk::GenerateSupersampledTimeGrid(timeGrid, INTERPOLATION_STEPS); auto hires_curve = mitk::GenerateModelSignalPlotData(position, fitInfo, interpolatedTimeGrid, parameterizer); result->InsertElement(mitk::MODEL_FIT_PLOT_INTERPOLATED_SIGNAL_NAME(), hires_curve); auto curve = mitk::GenerateModelSignalPlotData(position, fitInfo, timeGrid, parameterizer); result->InsertElement(mitk::MODEL_FIT_PLOT_SIGNAL_NAME(), curve); } return result; }; +const std::map ModelFitInspectorView::ConvertToMap(const std::vector> vec) +{ + std::map returnMap; + for (auto part : vec) + { + returnMap.insert(part); + } + + return returnMap; +} + bool ModelFitInspectorView::RefreshPlotData() { bool changed = false; if (m_currentSelectedNode.IsNull()) { this->m_PlotCurves = mitk::ModelFitPlotData(); changed = m_selectedNodeTime > m_lastRefreshTime; m_lastRefreshTime.Modified(); } else { assert(GetRenderWindowPart() != NULL); - const mitk::Image* input = GetCurrentInputImage(); + const mitk::Image *input = GetCurrentInputImage(); const mitk::ModelBase::TimeGridType timeGrid = GetCurrentTimeGrid(); if (m_currentFitTime > m_lastRefreshTime || m_currentPositionTime > m_lastRefreshTime) { if (m_validSelectedPosition) { - m_PlotCurves.currentPositionPlots = RefreshPlotDataCurveCollection(m_currentSelectedPosition,input,m_currentFit, timeGrid, m_currentModelParameterizer); + m_PlotCurves.currentPositionPlots = RefreshPlotDataCurveCollection( + m_currentSelectedPosition, input, m_currentFit, timeGrid, m_currentModelParameterizer); } else { m_PlotCurves.currentPositionPlots = mitk::PlotDataCurveCollection::New(); } changed = true; } auto bookmarks = m_PositionBookmarks.Lock(); if (bookmarks.IsNotNull()) { if (m_currentFitTime > m_lastRefreshTime || bookmarks->GetMTime() > m_lastRefreshTime) { m_PlotCurves.positionalPlots.clear(); auto endIter = bookmarks->End(); for (auto iter = bookmarks->Begin(); iter != endIter; iter++) { - auto collection = RefreshPlotDataCurveCollection(iter.Value(), input, m_currentFit, timeGrid, m_currentModelParameterizer); + auto collection = + RefreshPlotDataCurveCollection(iter.Value(), input, m_currentFit, timeGrid, m_currentModelParameterizer); m_PlotCurves.positionalPlots.emplace(iter.Index(), std::make_pair(iter.Value(), collection)); } changed = true; } } else { m_PlotCurves.positionalPlots.clear(); } // input data curve if (m_currentFitTime > m_lastRefreshTime) { m_PlotCurves.staticPlots->clear(); if (m_currentFit.IsNotNull()) { - m_PlotCurves.staticPlots = GenerateAdditionalModelFitPlotData(m_currentSelectedPosition, m_currentFit, timeGrid); + m_PlotCurves.staticPlots = + GenerateAdditionalModelFitPlotData(m_currentSelectedPosition, m_currentFit, timeGrid); } changed = true; } m_lastRefreshTime.Modified(); } return changed; } void ModelFitInspectorView::RenderFitInfo() { - assert(m_renderWindowPart != nullptr); + assert(m_renderWindowPart != nullptr); - // configure fit information + // configure fit information - if (m_currentFit.IsNull()) - { - m_Controls.lFitType->setText(""); - m_Controls.lFitUID->setText(""); - m_Controls.lModelName->setText(""); - m_Controls.lModelType->setText(""); - } - else - { - m_Controls.lFitType->setText(QString::fromStdString(m_currentFit->fitType)); - m_Controls.lFitUID->setText(QString::fromStdString(m_currentFit->uid)); - m_Controls.lModelName->setText(QString::fromStdString(m_currentFit->modelName)); - m_Controls.lModelType->setText(QString::fromStdString(m_currentFit->modelType)); - } + if (m_currentFit.IsNull()) + { + m_Controls.lFitType->setText(""); + m_Controls.lFitUID->setText(""); + m_Controls.lModelName->setText(""); + m_Controls.lModelType->setText(""); + } + else + { + m_Controls.lFitType->setText(QString::fromStdString(m_currentFit->fitType)); + m_Controls.lFitUID->setText(QString::fromStdString(m_currentFit->uid)); + m_Controls.lModelName->setText(QString::fromStdString(m_currentFit->modelName)); + m_Controls.lModelType->setText(QString::fromStdString(m_currentFit->modelType)); + } - // print results - std::stringstream infoOutput; + // print results + std::stringstream infoOutput; m_Controls.fitParametersWidget->setVisible(false); - m_Controls.groupSettings->setVisible(false); + m_Controls.groupSettings->setVisible(false); - if (m_currentFit.IsNull()) - { - infoOutput << "No fit selected. Only raw image data is plotted."; - } - else if (!m_validSelectedPosition) - { - infoOutput << - "Current position is outside of the input image of the selected fit.\nInspector is deactivated."; - } - else - { - m_Controls.fitParametersWidget->setVisible(true); - m_Controls.fitParametersWidget->setFits({ m_currentFit }); + if (m_currentFit.IsNull()) + { + infoOutput << "No fit selected. Only raw image data is plotted."; + } + else if (!m_validSelectedPosition) + { + infoOutput << "Current position is outside of the input image of the selected fit.\nInspector is deactivated."; + } + else + { + m_Controls.fitParametersWidget->setVisible(true); + m_Controls.fitParametersWidget->setFits({m_currentFit}); m_Controls.fitParametersWidget->setPositionBookmarks(m_PositionBookmarks.Lock()); m_Controls.fitParametersWidget->setCurrentPosition(m_currentSelectedPosition); - } + } - // configure data table - m_Controls.tableInputData->clearContents(); + // configure data table + m_Controls.tableInputData->clearContents(); - if (m_currentFit.IsNull()) - { - infoOutput << "No fit selected. Only raw image data is plotted."; - } - else - { - m_Controls.groupSettings->setVisible(true); - m_Controls.tableInputData->setRowCount(m_PlotCurves.staticPlots->size()); + if (m_currentFit.IsNull()) + { + infoOutput << "No fit selected. Only raw image data is plotted."; + } + else + { + m_Controls.groupSettings->setVisible(true); + m_Controls.tableInputData->setRowCount(m_PlotCurves.staticPlots->size()); - unsigned int rowIndex = 0; + unsigned int rowIndex = 0; for (mitk::PlotDataCurveCollection::const_iterator pos = m_PlotCurves.staticPlots->begin(); - pos != m_PlotCurves.staticPlots->end(); ++pos, ++rowIndex) - { - QColor dataColor; - - if (pos->first == "ROI") - { - dataColor = QColor(0, 190, 0); - } - else - { - //Use HSV schema of QColor to calculate a different color depending on the - //number of already existing free iso lines. - dataColor.setHsv(((rowIndex + 1) * 85) % 360, 255, 255); - } - - QTableWidgetItem* newItem = new QTableWidgetItem(QString::fromStdString(pos->first)); - m_Controls.tableInputData->setItem(rowIndex, 0, newItem); - newItem = new QTableWidgetItem(); - newItem->setBackgroundColor(dataColor); - m_Controls.tableInputData->setItem(rowIndex, 1, newItem); - } + pos != m_PlotCurves.staticPlots->end(); + ++pos, ++rowIndex) + { + QColor dataColor; + + if (pos->first == "ROI") + { + dataColor = QColor(0, 190, 0); + } + else + { + // Use HSV schema of QColor to calculate a different color depending on the + // number of already existing free iso lines. + dataColor.setHsv(((rowIndex + 1) * 85) % 360, 255, 255); + } + + QTableWidgetItem *newItem = new QTableWidgetItem(QString::fromStdString(pos->first)); + m_Controls.tableInputData->setItem(rowIndex, 0, newItem); + newItem = new QTableWidgetItem(); + newItem->setBackgroundColor(dataColor); + m_Controls.tableInputData->setItem(rowIndex, 1, newItem); } + } - m_Controls.lInfo->setText(QString::fromStdString(infoOutput.str())); + m_Controls.lInfo->setText(QString::fromStdString(infoOutput.str())); } -void ModelFitInspectorView::RenderPlotCurve(const mitk::PlotDataCurveCollection* curveCollection, const QColor& sampleColor, const QColor& signalColor, const std::string& posString) +void ModelFitInspectorView::RenderPlotCurve(const mitk::PlotDataCurveCollection *curveCollection, + const QColor &sampleColor, + const QColor &signalColor, + const std::string &posString) { auto sampleCurve = mitk::ModelFitPlotData::GetSamplePlot(curveCollection); if (sampleCurve) { std::string name = mitk::MODEL_FIT_PLOT_SAMPLE_NAME() + posString; - unsigned int curveId = m_Controls.widgetPlot->InsertCurve(name.c_str()); - m_Controls.widgetPlot->SetCurveData(curveId, sampleCurve->GetValues()); - m_Controls.widgetPlot->SetCurvePen(curveId, QPen(Qt::NoPen)); - // QwtSymbol needs to passed as a real pointer from MITK v2013.09.0 on - // (QwtPlotCurve deletes it on destruction and assignment). - QwtSymbol* dataSymbol = new QwtSymbol(QwtSymbol::Diamond, sampleColor, sampleColor, QSize(8, 8)); - m_Controls.widgetPlot->SetCurveSymbol(curveId, dataSymbol); + auto sampleCurveMap = ConvertToMap(sampleCurve->GetValues()); - // Again, there is no way to set a curve's legend attributes via QmitkPlotWidget so this - // gets unnecessarily complicated. - QwtPlotCurve* measurementCurve = dynamic_cast(m_Controls.widgetPlot-> - GetPlot()->itemList(QwtPlotItem::Rtti_PlotCurve).back()); - measurementCurve->setLegendAttribute(QwtPlotCurve::LegendShowSymbol); - measurementCurve->setLegendIconSize(QSize(8, 8)); + m_Controls.chartWidget->AddData2D(sampleCurveMap, name, QmitkChartWidget::ChartType::scatter); + m_Controls.chartWidget->SetColor(name, sampleColor.name().toStdString()); } - //draw model curve + // draw model curve auto signalCurve = mitk::ModelFitPlotData::GetInterpolatedSignalPlot(curveCollection); if (signalCurve) { std::string name = mitk::MODEL_FIT_PLOT_SIGNAL_NAME() + posString; QPen pen; pen.setColor(signalColor); pen.setWidth(2); - unsigned int curveId = m_Controls.widgetPlot->InsertCurve(name.c_str()); - m_Controls.widgetPlot->SetCurveData(curveId, signalCurve->GetValues()); - m_Controls.widgetPlot->SetCurvePen(curveId, pen); - // Manually set the legend attribute to use the symbol as the legend icon and alter its - // size. Otherwise it would revert to default which is drawing a square which is the color - // of the curve's pen, so in this case none which defaults to black. - // Unfortunately, QmitkPlotWidget offers no way to set the legend attribute and icon size so - // this looks a bit hacky. - QwtPlotCurve* fitCurve = dynamic_cast(m_Controls.widgetPlot->GetPlot()-> - itemList(QwtPlotItem::Rtti_PlotCurve).back()); - fitCurve->setLegendAttribute(QwtPlotCurve::LegendShowLine); - } + auto signalCurveMap = ConvertToMap(signalCurve->GetValues()); + m_Controls.chartWidget->AddData2D(signalCurveMap, name, QmitkChartWidget::ChartType::line); + m_Controls.chartWidget->SetColor(name, signalColor.name().toStdString()); + } } void ModelFitInspectorView::RenderPlot() { - m_Controls.widgetPlot->Clear(); + m_Controls.chartWidget->Clear(); std::string xAxis = DEFAULT_X_AXIS; std::string yAxis = "Intensity"; std::string plotTitle = "Raw data plot: no data"; if (m_currentSelectedNode.IsNotNull()) { plotTitle = "Raw data plot: " + m_currentSelectedNode->GetName(); } if (m_currentFit.IsNotNull()) { plotTitle = m_currentFit->modelName.c_str(); xAxis = m_currentFit->xAxisName; if (!m_currentFit->xAxisUnit.empty()) { xAxis += " [" + m_currentFit->xAxisUnit + "]"; } yAxis = m_currentFit->yAxisName; if (!m_currentFit->yAxisUnit.empty()) { yAxis += " [" + m_currentFit->yAxisUnit + "]"; } } - m_Controls.widgetPlot->SetAxisTitle(QwtPlot::xBottom, xAxis.c_str()); - m_Controls.widgetPlot->SetAxisTitle(QwtPlot::yLeft, yAxis.c_str()); - m_Controls.widgetPlot->SetPlotTitle(plotTitle.c_str()); + m_Controls.chartWidget->SetYAxisLabel(yAxis); + m_Controls.chartWidget->SetXAxisLabel(xAxis); + m_Controls.chartWidget->SetTitle(plotTitle); // Draw static curves unsigned int colorIndex = 0; for (mitk::PlotDataCurveCollection::const_iterator pos = m_PlotCurves.staticPlots->begin(); - pos != m_PlotCurves.staticPlots->end(); ++pos) + pos != m_PlotCurves.staticPlots->end(); + ++pos) { QColor dataColor; - unsigned int curveId = m_Controls.widgetPlot->InsertCurve(pos->first.c_str()); - m_Controls.widgetPlot->SetCurveData(curveId, pos->second->GetValues()); + auto staticCurveMap = ConvertToMap(pos->second->GetValues()); + + std::string name = pos->first.c_str(); + m_Controls.chartWidget->AddData2D(staticCurveMap, name, QmitkChartWidget::ChartType::line); if (pos->first == "ROI") { dataColor = QColor(0, 190, 0); QPen pen; pen.setColor(dataColor); pen.setStyle(Qt::SolidLine); - m_Controls.widgetPlot->SetCurvePen(curveId, pen); + m_Controls.chartWidget->SetColor(name, dataColor.name().toStdString()); } else { - //Use HSV schema of QColor to calculate a different color depending on the - //number of already existing curves. + // Use HSV schema of QColor to calculate a different color depending on the + // number of already existing curves. dataColor.setHsv((++colorIndex * 85) % 360, 255, 150); - m_Controls.widgetPlot->SetCurvePen(curveId, QPen(Qt::NoPen)); } - // QwtSymbol needs to passed as a real pointer from MITK v2013.09.0 on - // (QwtPlotCurve deletes it on destruction and assignment). - QwtSymbol* dataSymbol = new QwtSymbol(QwtSymbol::Triangle, dataColor, dataColor, - QSize(8, 8)); - m_Controls.widgetPlot->SetCurveSymbol(curveId, dataSymbol); - // Again, there is no way to set a curve's legend attributes via QmitkPlotWidget so this - // gets unnecessarily complicated. - QwtPlotCurve* measurementCurve = dynamic_cast(m_Controls.widgetPlot-> - GetPlot()->itemList(QwtPlotItem::Rtti_PlotCurve).back()); - measurementCurve->setLegendAttribute(QwtPlotCurve::LegendShowSymbol); - measurementCurve->setLegendIconSize(QSize(8, 8)); + m_Controls.chartWidget->SetColor(name, dataColor.name().toStdString()); } // Draw positional curves - for (const auto& posIter : this->m_PlotCurves.positionalPlots) + for (const auto &posIter : this->m_PlotCurves.positionalPlots) { QColor dataColor; dataColor.setHsv((++colorIndex * 85) % 360, 255, 150); - this->RenderPlotCurve(posIter.second.second, dataColor, dataColor, " @ "+mitk::ModelFitPlotData::GetPositionalCollectionName(posIter)); + this->RenderPlotCurve(posIter.second.second, + dataColor, + dataColor, + " @ " + mitk::ModelFitPlotData::GetPositionalCollectionName(posIter)); } // Draw current pos curve this->RenderPlotCurve(m_PlotCurves.currentPositionPlots, QColor(Qt::red), QColor(Qt::black), ""); - QwtLegend* legend = new QwtLegend(); - legend->setFrameShape(QFrame::Box); - legend->setFrameShadow(QFrame::Sunken); - legend->setLineWidth(1); - m_Controls.widgetPlot->SetLegend(legend, QwtPlot::BottomLegend); + m_Controls.chartWidget->SetLegendPosition(QmitkChartWidget::LegendPosition::bottomRight); - m_Controls.widgetPlot->Replot(); + m_Controls.chartWidget->Show(); } void ModelFitInspectorView::EnsureBookmarkPointSet() { if (m_PositionBookmarks.IsExpired() || m_PositionBookmarksNode.IsExpired()) { - const char* nodeName = "org.mitk.gui.qt.fit.inspector.positions"; + const char *nodeName = "org.mitk.gui.qt.fit.inspector.positions"; mitk::DataNode::Pointer node = this->GetDataStorage()->GetNamedNode(nodeName); if (!node) { node = mitk::DataNode::New(); node->SetName(nodeName); node->SetBoolProperty("helper object", true); this->GetDataStorage()->Add(node); } m_PositionBookmarksNode = node; - mitk::PointSet::Pointer pointSet = dynamic_cast(node->GetData()); + mitk::PointSet::Pointer pointSet = dynamic_cast(node->GetData()); if (pointSet.IsNull()) { pointSet = mitk::PointSet::New(); node->SetData(pointSet); } m_PositionBookmarks = pointSet; } } diff --git a/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.h b/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.h index 8be8155ee7..7ae7c1a178 100644 --- a/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.h +++ b/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorView.h @@ -1,205 +1,190 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef ModelFitInspectorView_h #define ModelFitInspectorView_h // Blueberry -//#include #include // mitk #include #include #include "QmitkSliceNavigationListener.h" #include "mitkModelFitStaticParameterMap.h" #include "mitkModelParameterizerBase.h" #include "mitkModelFitInfo.h" #include "mitkIModelFitProvider.h" #include "mitkModelFitPlotDataHelper.h" #include "QmitkSelectionServiceConnector.h" #include "QmitkFitParameterModel.h" // Qt #include "ui_ModelFitInspectorViewControls.h" /** * @brief View class defining the UI part of the ModelFitInspector plug-in. */ class ModelFitInspectorView : public QmitkAbstractView, public mitk::IRenderWindowPartListener { // this is needed for all Qt objects that should have a Qt meta-object // (everything that derives from QObject and wants to have signal/slots) Q_OBJECT public: ModelFitInspectorView(); ~ModelFitInspectorView(); static const std::string VIEW_ID; protected slots: void OnSliceChanged(); /** * @brief Triggered when the selection of the "Modelfit" combo box changes. * Sets the selected fit as the current one. * @param index The index (in the combo box) of the selected item. */ void OnFitSelectionChanged(int index); void OnInputChanged(const QList& nodes); void OnPositionBookmarksChanged(); /** Triggered when the selection of "fixed" y axis scaling changes*/ void OnScaleFixedYChecked(bool checked); void OnScaleToDataYClicked(); void OnFixedScalingYChanged(double value); /** Triggered when the selection of "fixed" x axis scaling changes*/ void OnScaleFixedXChecked(bool checked); void OnScaleToDataXClicked(); void OnFixedScalingXChanged(double value); void OnFullPlotClicked(bool checked); protected: virtual void CreateQtPartControl(QWidget* parent) override; virtual void SetFocus() override; virtual void NodeRemoved(const mitk::DataNode* node) override; /** Helper that actualizes the fit selection widget and returns the index of the currently selected * fit.*/ int ActualizeFitSelectionWidget(); virtual void RenderWindowPartActivated(mitk::IRenderWindowPart* renderWindowPart); virtual void RenderWindowPartDeactivated(mitk::IRenderWindowPart* renderWindowPart); - /** - * @brief Calculates the curve data using the current fit's model and parameterizer. - * @param position Indicating the point in the input image for which the model curve should be calculated. - * @return A vector of points for the curve data. - */ - QmitkPlotWidget::XYDataVector CalcCurveFromModel(const mitk::Point3D& position); - - /** - * @brief Calculates the curve data using the current fit's function string. - * @param timeGrid The time grid containing the (interpolated) x values for the curve data. - * @return A vector of points for the curve data. - */ - QmitkPlotWidget::XYDataVector CalcCurveFromFunction(const mitk::Point3D& position, - const mitk::ModelBase::TimeGridType& - timeGrid); - /** * @brief Returns the parent node of the given node if it exists. * @param node The node whose parent node should be returned. * @return The parent node of the given node or NULL if it doesn't exist. */ mitk::DataNode::ConstPointer GetParentNode(mitk::DataNode::ConstPointer node); /** Sets m_currentSelectedPosition to the current selection and validates if this position is valid * for the input image of the currently selected fit. If it is valid, m_validSelectedPosition is set to true. * If the fit, his input image or geometry is not specified, it will also handled as invalid.*/ void ValidateAndSetCurrentPosition(); /** Returns the current input image. If a current fit is set it will be its input image. * Otherwise it will be the image stored in the currently selected node. If the node is not set, contains no image * or the image is not 4D, NULL will be returned.*/ mitk::Image::Pointer GetCurrentInputImage() const; /** Returns the variable/time grid of the GetCurrentInputImage(). If a model fit is selected its provider will be used to get the correct grid, otherwise just a simple time grid will be extracted.*/ const mitk::ModelBase::TimeGridType GetCurrentTimeGrid() const; Ui::ModelFitInspectorViewControls m_Controls; mitk::IRenderWindowPart* m_renderWindowPart; /** @brief Is a visualization currently running? */ bool m_internalUpdateFlag; /** @brief List of modelfits currently in the data manager */ typedef std::map ModelFitInfoListType; ModelFitInfoListType m_modelfitList; /** @brief The currently selected modelfit */ mitk::modelFit::ModelFitInfo::ConstPointer m_currentFit; /** @brief Pointer to the instance of the model parameterizer for the current fit */ mitk::ModelParameterizerBase::Pointer m_currentModelParameterizer; mitk::IModelFitProvider* m_currentModelProviderService; /** @brief currently valid selected position in the inspector*/ mitk::Point3D m_currentSelectedPosition; /** @brief indicates if the currently selected position is valid for the currently selected fit. * This it is within the input image */ bool m_validSelectedPosition; /** @brief currently selected time step of the selected node for the visualization logic*/ unsigned int m_currentSelectedTimeStep; /** @brief currently selected node for the visualization logic*/ mitk::DataNode::ConstPointer m_currentSelectedNode; mitk::WeakPointer m_PositionBookmarksNode; mitk::WeakPointer m_PositionBookmarks; /** @brief Number of interpolation steps between two x values */ static const unsigned int INTERPOLATION_STEPS; /*************************************/ /* Members for visualizing the model */ itk::TimeStamp m_selectedNodeTime; itk::TimeStamp m_currentFitTime; itk::TimeStamp m_currentPositionTime; itk::TimeStamp m_lastRefreshTime; mitk::ModelFitPlotData m_PlotCurves; std::unique_ptr m_SelectionServiceConnector; QmitkFitParameterModel* m_FitParameterModel; QmitkSliceNavigationListener m_SliceChangeListener; /** Check and updates the plot data if needed. * @return indicates if something was refreshed (true)*/ bool RefreshPlotData(); void RenderPlot(); void RenderPlotCurve(const mitk::PlotDataCurveCollection* curveCollection, const QColor& sampleColor, const QColor& signalColor, const std::string& posString); void RenderFitInfo(); void EnsureBookmarkPointSet(); static mitk::PlotDataCurveCollection::Pointer RefreshPlotDataCurveCollection(const mitk::Point3D& position, const mitk::Image* input, const mitk::modelFit::ModelFitInfo* fitInfo, const mitk::ModelBase::TimeGridType& timeGrid, mitk::ModelParameterizerBase* parameterizer); + + const std::map ConvertToMap(const std::vector > vec); }; #endif // ModelFitInspectorView_h diff --git a/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorViewControls.ui b/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorViewControls.ui index 28f81f5577..ff478a4e35 100644 --- a/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorViewControls.ui +++ b/Plugins/org.mitk.gui.qt.fit.inspector/src/internal/ModelFitInspectorViewControls.ui @@ -1,762 +1,759 @@ ModelFitInspectorViewControls 0 0 721 - 865 + 1070 0 0 QmitkTemplate 5 5 5 5 5 6 6 Modelfit: Input - - - true - + 0 0 0 400 Qt::Horizontal 40 20 Full screen plot true false true - 0 + 3 Fit info 50 16777215 Fit type 0 0 Fit uid: 0 0 Model name: Model type: Fit parameter Parameter used for the fit. 3 5 5 5 5 Inspection positions 3 5 5 5 5 View settings Settings for the visualization of fittings 3 5 5 5 5 X-axis scaling: true automatic true true fixed false false 40 16777215 min: false -9999.000000000000000 9999.000000000000000 Qt::Horizontal 40 20 false 40 16777215 max: false -9999.000000000000000 9999.000000000000000 Qt::Horizontal 40 20 false Sets the min and max to the current range of data +-10% Scale to data Y-axis scaling: true automatic true true fixed false false 40 16777215 min: - + false -9999.000000000000000 9999.000000000000000 Qt::Horizontal 40 20 false 40 16777215 max: - + false -9999.000000000000000 9999.000000000000000 Qt::Horizontal 40 20 false Sets the min and max to the current range of data +-10% Scale to data Additional input data visibility: 5 5 5 5 5 8 150 false true false 20 20 Name Color Qt::Vertical 20 40 Plot data export Display and export option for the current data samples, model signals and additinal fitting informations of the plot. 3 5 5 5 5 80 0 - QmitkSingleNodeSelectionWidget + QmitkChartWidget QWidget -
QmitkSingleNodeSelectionWidget.h
- 1 +
QmitkChartWidget.h
 - QmitkPlotWidget + QmitkSingleNodeSelectionWidget QWidget -
QmitkPlotWidget.h
+
QmitkSingleNodeSelectionWidget.h
+ 1 QmitkFitParameterWidget QWidget
QmitkFitParameterWidget.h
 QmitkInspectionPositionWidget QWidget
QmitkInspectionPositionWidget.h
 QmitkFitPlotDataWidget QWidget
QmitkFitPlotDataWidget.h
 radioScaleFixed clicked(bool) - sbFixMin + sbFixMin_y setEnabled(bool) 66 528 86 559 radioScaleFixed clicked(bool) - sbFixMax + sbFixMax_y setEnabled(bool) 208 535 195 559 radioScaleFixed clicked(bool) btnScaleToData setEnabled(bool) 299 530 292 557