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Diffusion MITK 23b07c9a6b5f

First draft of the flow bench
23b07c9a6b5f
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Description

First draft of the flow bench

Summary:
Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Fixed typos

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Added Feature to SceneIO to read unzipped scene directories.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Added feature to FlowBench to load unzipped scenes passed by the command line.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

First draft with segmentation control

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Optimized/cleaned segmentation perspective

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Added whitelist

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Moved perspective to flow segementation plugin to correct dependencies

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Fixed flow segmentation whitelist.

missing plugins and modules

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Renamed flowbench plugins into flow plugins. Finished dependency inversion between flow application and control plugin.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Fixed gcc compiler errors

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Removed unnecessary out commented code

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Quickfix / hack to avoid parsing errors for flow arguments under linux.

Correct solution has to be discussed.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Added system independent output path generation.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Corrected command line argument name

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Patched problem due to T26903 in order to allow storing of DICOM seg again.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Added some documentation.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Merge remote-tracking branch 'origin/master' into T26820-slick_segmentation_workbench

  1. Conflicts:
  2. Modules/Multilabel/autoload/DICOMSegIO/mitkDICOMSegIOMimeTypes.cpp

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Test Plan: Code review / manual testing

Reviewers: MITK Reviewer Group I, gaoh, kislinsk

Reviewed By: MITK Reviewer Group I, gaoh, kislinsk

Subscribers: gaoh, kislinsk

Maniphest Tasks: T26820

Differential Revision: https://phabricator.mitk.org/D249

Details

Provenance
flocaAuthored on Mar 2 2020, 10:56 AM
flocaPushed on Mar 2 2020, 10:58 AM
Reviewer
MITK Reviewer Group I
Differential Revision
Restricted Differential Revision
Parents
rMITK21171260f247: Merge remote-tracking branch 'origin/master' into T26820…
rMITK4325a085b302: Merge branch 'T27170-MinimalBuild'
Branches
Unknown
Tags
Unknown
Tasks
Restricted Maniphest Task

Event Timeline

floca committed rMITK23b07c9a6b5f: First draft of the flow bench (authored by floca).Mar 2 2020, 10:58 AM
floca added a task: Restricted Maniphest Task.
floca added an edge: Restricted Differential Revision.Apr 30 2020, 11:42 PM

Merged Changes

Changes (73)

PathSizePackages
Applications/
FlowBench/
icons/
Workbench/
icons/
CMake/
BuildConfigurations/
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Whitelists/
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Documentation/
Doxygen/
3-DeveloperManual/
Application/
BlueBerry/
Modules/
SceneSerialization/
include/
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src/
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Plugins/
org.blueberry.ui.qt/
src/
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org.mitk.gui.qt.flow.segmentation/
resources/
org.mitk.gui.qt.extapplication/
resources/
icon.svg/
perspectives/
viewer_icon.svg
O3: MITK Reviewer Group II
perspectives/
segmentation_icon.svg
viewer_icon.svg
O3: MITK Reviewer Group II
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org.mitk.gui.qt.flowapplication/
org.mitk.gui.qt.extapplication/
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resources/
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rMITK23b07c9a6b5f

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Applications/AppList.cmake

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Applications/FlowBench/CMakeLists.txt

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Applications/FlowBench/MitkFlowBench.cpp

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Documentation/Doxygen/3-DeveloperManual/Application/BlueBerry/BlueBerryIntro.dox

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Modules/SceneSerialization/include/mitkSceneIO.h

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Modules/SceneSerialization/src/mitkSceneIO.cpp

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Plugins/PluginList.cmake

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Plugins/org.mitk.gui.qt.flow.segmentation/CMakeLists.txt

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Plugins/org.mitk.gui.qt.flow.segmentation/src/internal/org_mitk_gui_qt_flow_segmentation_Activator.cpp

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Plugins/org.mitk.gui.qt.flow.segmentation/src/internal/perspectives/QmitkFlowSegmentationPerspective.cpp

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkExtFileSaveProjectAction.cpp

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkExtFileSaveProjectAction.h

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkFlowApplicationPlugin.h

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkFlowApplicationWorkbenchAdvisor.cpp

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkFlowApplicationWorkbenchAdvisor.h

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkFlowApplicationWorkbenchWindowAdvisor.cpp

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkFlowApplicationWorkbenchWindowAdvisor.h

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Plugins/org.mitk.gui.qt.flowapplication/src/internal/QmitkFlowApplicationWorkbenchWindowAdvisorHack.h

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