diff --git a/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.cpp b/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.cpp index bf680c8c44..5966915b23 100644 --- a/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.cpp +++ b/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.cpp @@ -1,627 +1,626 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "QmitkImageStatisticsView.h" #include // berry includes #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include "mitkImageStatisticsContainerManager.h" #include const std::string QmitkImageStatisticsView::VIEW_ID = "org.mitk.views.imagestatistics"; QmitkImageStatisticsView::QmitkImageStatisticsView(QObject * /*parent*/, const char * /*name*/) { this->m_CalculationJob = new QmitkImageStatisticsCalculationJob(); } QmitkImageStatisticsView::~QmitkImageStatisticsView() { if (m_selectedPlanarFigure) { m_selectedPlanarFigure->RemoveObserver(m_PlanarFigureObserverTag); } if (!m_CalculationJob->isFinished()) { m_CalculationJob->terminate(); m_CalculationJob->wait(); } this->m_CalculationJob->deleteLater(); } void QmitkImageStatisticsView::CreateQtPartControl(QWidget *parent) { m_Controls.setupUi(parent); m_Controls.widget_histogram->SetTheme(this->GetColorTheme()); m_Controls.widget_intensityProfile->SetTheme(this->GetColorTheme()); m_Controls.groupBox_histogram->setVisible(true); m_Controls.groupBox_intensityProfile->setVisible(false); m_Controls.label_currentlyComputingStatistics->setVisible(false); m_Controls.sliderWidget_histogram->setPrefix("Time: "); m_Controls.sliderWidget_histogram->setDecimals(0); m_Controls.sliderWidget_histogram->setVisible(false); m_Controls.sliderWidget_intensityProfile->setPrefix("Time: "); m_Controls.sliderWidget_intensityProfile->setDecimals(0); m_Controls.sliderWidget_intensityProfile->setVisible(false); ResetGUI(); PrepareDataStorageComboBoxes(); m_Controls.widget_statistics->SetDataStorage(this->GetDataStorage()); CreateConnections(); } void QmitkImageStatisticsView::CreateConnections() { connect(this->m_CalculationJob, &QmitkImageStatisticsCalculationJob::finished, this, &QmitkImageStatisticsView::OnStatisticsCalculationEnds, Qt::QueuedConnection); connect(this->m_Controls.checkBox_ignoreZero, &QCheckBox::stateChanged, this, &QmitkImageStatisticsView::OnCheckBoxIgnoreZeroStateChanged); connect(this->m_Controls.sliderWidget_histogram, &ctkSliderWidget::valueChanged, this, &QmitkImageStatisticsView::OnSliderWidgetHistogramChanged); connect(this->m_Controls.sliderWidget_intensityProfile, &ctkSliderWidget::valueChanged, this, &QmitkImageStatisticsView::OnSliderWidgetIntensityProfileChanged); connect(this->m_Controls.imageSelector, static_cast(&QComboBox::currentIndexChanged), this, &QmitkImageStatisticsView::OnImageSelectorChanged); connect(this->m_Controls.maskImageSelector, static_cast(&QComboBox::currentIndexChanged), this, &QmitkImageStatisticsView::OnMaskSelectorChanged); } void QmitkImageStatisticsView::OnCheckBoxIgnoreZeroStateChanged(int state) { m_ForceRecompute = true; if (state != Qt::Unchecked) { this->m_CalculationJob->SetIgnoreZeroValueVoxel(true); } else { this->m_CalculationJob->SetIgnoreZeroValueVoxel(false); } CalculateOrGetStatistics(); } void QmitkImageStatisticsView::OnSliderWidgetHistogramChanged(double value) { unsigned int timeStep = static_cast(value); auto mask = m_selectedMaskNode ? m_selectedMaskNode->GetData() : nullptr; auto imageStatistics = mitk::ImageStatisticsContainerManager::GetImageStatistics( this->GetDataStorage(), m_selectedImageNode->GetData(), mask); HistogramType::ConstPointer histogram = nullptr; if (imageStatistics->TimeStepExists(timeStep)) { histogram = imageStatistics->GetStatisticsForTimeStep(timeStep).m_Histogram; } if (this->m_CalculationJob->GetStatisticsUpdateSuccessFlag()) { if (histogram.IsNotNull()) { this->FillHistogramWidget({histogram}, {m_selectedImageNode->GetName()}); } else { HistogramType::Pointer emptyHistogram = HistogramType::New(); this->FillHistogramWidget({emptyHistogram}, {m_selectedImageNode->GetName()}); } } } void QmitkImageStatisticsView::OnSliderWidgetIntensityProfileChanged() { // intensity profile is always computed on request, not stored as node in DataStorage auto image = dynamic_cast(m_selectedImageNode->GetData()); auto planarFigure = dynamic_cast(m_selectedMaskNode->GetData()); if (image && planarFigure && this->m_CalculationJob->GetStatisticsUpdateSuccessFlag()) { this->ComputeAndDisplayIntensityProfile(image, planarFigure); } } void QmitkImageStatisticsView::PartClosed(const berry::IWorkbenchPartReference::Pointer &) {} void QmitkImageStatisticsView::FillHistogramWidget(const std::vector &histogram, const std::vector &dataLabels) { m_Controls.groupBox_histogram->setVisible(true); m_Controls.widget_histogram->SetTheme(this->GetColorTheme()); m_Controls.widget_histogram->Reset(); m_Controls.widget_histogram->SetHistogram(histogram.front(), dataLabels.front()); connect(m_Controls.widget_histogram, &QmitkHistogramVisualizationWidget::RequestHistogramUpdate, this, &QmitkImageStatisticsView::OnRequestHistogramUpdate); } QmitkChartWidget::ColorTheme QmitkImageStatisticsView::GetColorTheme() const { ctkPluginContext *context = berry::WorkbenchPlugin::GetDefault()->GetPluginContext(); ctkServiceReference styleManagerRef = context->getServiceReference(); if (styleManagerRef) { auto styleManager = context->getService(styleManagerRef); if (styleManager->GetStyle().name == "Dark") { return QmitkChartWidget::ColorTheme::darkstyle; } else { return QmitkChartWidget::ColorTheme::lightstyle; } } return QmitkChartWidget::ColorTheme::darkstyle; } void QmitkImageStatisticsView::OnImageSelectorChanged() { auto selectedImageNode = m_Controls.imageSelector->GetSelectedNode(); if (selectedImageNode != m_selectedImageNode) { m_selectedImageNode = selectedImageNode; if (m_selectedImageNode.IsNotNull()) { ResetGUIDefault(); auto isPlanarFigurePredicate = mitk::GetImageStatisticsPlanarFigurePredicate(); auto isMaskPredicate = mitk::GetImageStatisticsMaskPredicate(); auto hasSameGeometry = mitk::NodePredicateGeometry::New(m_selectedImageNode->GetData()->GetGeometry()); hasSameGeometry->SetCheckPrecision(1e-10); auto isMaskWithGeometryPredicate = mitk::NodePredicateAnd::New(isMaskPredicate, hasSameGeometry); auto isMaskOrPlanarFigureWithGeometryPredicate = mitk::NodePredicateOr::New(isPlanarFigurePredicate, isMaskWithGeometryPredicate); // prevent triggering of computation as the predicate triggers a signalChanged event m_Controls.maskImageSelector->disconnect(); m_Controls.maskImageSelector->SetPredicate(isMaskOrPlanarFigureWithGeometryPredicate); // reset mask to m_Controls.maskImageSelector->SetZeroEntryText(""); m_Controls.checkBox_ignoreZero->setEnabled(true); m_selectedMaskNode = nullptr; m_Controls.widget_statistics->SetMaskNodes({}); CalculateOrGetStatistics(); m_Controls.widget_statistics->SetImageNodes({m_selectedImageNode}); connect(this->m_Controls.maskImageSelector, static_cast(&QComboBox::currentIndexChanged), this, &QmitkImageStatisticsView::OnMaskSelectorChanged); } else { m_Controls.widget_statistics->SetImageNodes({}); m_Controls.widget_statistics->SetMaskNodes({}); m_Controls.widget_statistics->Reset(); m_Controls.widget_histogram->Reset(); ResetGUI(); } } } void QmitkImageStatisticsView::OnMaskSelectorChanged() { auto selectedMaskNode = m_Controls.maskImageSelector->GetSelectedNode(); if (selectedMaskNode != m_selectedMaskNode) { m_selectedMaskNode = selectedMaskNode; if (m_selectedMaskNode.IsNotNull()) { m_Controls.widget_statistics->SetMaskNodes({m_selectedMaskNode}); } else { m_Controls.widget_statistics->SetMaskNodes({}); } CalculateOrGetStatistics(); } } void QmitkImageStatisticsView::CalculateOrGetStatistics() { if (this->m_selectedPlanarFigure) { this->m_selectedPlanarFigure->RemoveObserver(this->m_PlanarFigureObserverTag); this->m_selectedPlanarFigure = nullptr; } m_Controls.groupBox_intensityProfile->setVisible(false); m_Controls.widget_statistics->setEnabled(m_selectedImageNode.IsNotNull()); if (m_selectedImageNode != nullptr) { auto image = dynamic_cast(m_selectedImageNode->GetData()); mitk::Image *mask = nullptr; mitk::PlanarFigure *maskPlanarFigure = nullptr; if (image->GetDimension() == 4) { m_Controls.sliderWidget_histogram->setVisible(true); unsigned int maxTimestep = image->GetTimeSteps(); m_Controls.sliderWidget_histogram->setMaximum(maxTimestep - 1); } else { m_Controls.sliderWidget_histogram->setVisible(false); } if (m_selectedMaskNode != nullptr) { mask = dynamic_cast(m_selectedMaskNode->GetData()); if (mask == nullptr) { maskPlanarFigure = dynamic_cast(m_selectedMaskNode->GetData()); } } mitk::ImageStatisticsContainer::ConstPointer imageStatistics; if (mask) { imageStatistics = mitk::ImageStatisticsContainerManager::GetImageStatistics(this->GetDataStorage(), image, mask); } else if (maskPlanarFigure) { m_selectedPlanarFigure = maskPlanarFigure; ITKCommandType::Pointer changeListener = ITKCommandType::New(); changeListener->SetCallbackFunction(this, &QmitkImageStatisticsView::CalculateOrGetStatistics); this->m_PlanarFigureObserverTag = m_selectedPlanarFigure->AddObserver(mitk::EndInteractionPlanarFigureEvent(), changeListener); if (!maskPlanarFigure->IsClosed()) { ComputeAndDisplayIntensityProfile(image, maskPlanarFigure); } imageStatistics = mitk::ImageStatisticsContainerManager::GetImageStatistics(this->GetDataStorage(), image, maskPlanarFigure); } else { imageStatistics = mitk::ImageStatisticsContainerManager::GetImageStatistics(this->GetDataStorage(), image); } bool imageStatisticsOlderThanInputs = false; if (imageStatistics && (imageStatistics->GetMTime() < image->GetMTime() || (mask && imageStatistics->GetMTime() < mask->GetMTime()) || (maskPlanarFigure && imageStatistics->GetMTime() < maskPlanarFigure->GetMTime()))) { imageStatisticsOlderThanInputs = true; } if (imageStatistics) { // triggers recomputation when switched between images and the newest one has not 100 bins (default) auto calculatedBins = imageStatistics->GetStatisticsForTimeStep(0).m_Histogram.GetPointer()->Size(); if (calculatedBins != 100) { OnRequestHistogramUpdate(m_Controls.widget_histogram->GetBins()); } } // statistics need to be computed if (!imageStatistics || imageStatisticsOlderThanInputs || m_ForceRecompute) { CalculateStatistics(image, mask, maskPlanarFigure); } // statistics already computed else { // Not an open planar figure: show histogram (intensity profile already shown) if (!(maskPlanarFigure && !maskPlanarFigure->IsClosed())) { if (imageStatistics->TimeStepExists(0)) { auto histogram = imageStatistics->GetStatisticsForTimeStep(0).m_Histogram.GetPointer(); std::string imageNodeName = m_selectedImageNode->GetName(); this->FillHistogramWidget({histogram}, {imageNodeName}); } } } } else { ResetGUI(); } m_ForceRecompute = false; } void QmitkImageStatisticsView::ComputeAndDisplayIntensityProfile(mitk::Image *image, mitk::PlanarFigure *maskPlanarFigure) { mitk::Image::Pointer inputImage; if (image->GetDimension() == 4) { m_Controls.sliderWidget_intensityProfile->setVisible(true); unsigned int maxTimestep = image->GetTimeSteps(); m_Controls.sliderWidget_intensityProfile->setMaximum(maxTimestep - 1); // Intensity profile can only be calculated on 3D, so extract if 4D mitk::ImageTimeSelector::Pointer timeSelector = mitk::ImageTimeSelector::New(); int currentTimestep = static_cast(m_Controls.sliderWidget_intensityProfile->value()); timeSelector->SetInput(image); timeSelector->SetTimeNr(currentTimestep); timeSelector->Update(); inputImage = timeSelector->GetOutput(); } else { m_Controls.sliderWidget_intensityProfile->setVisible(false); inputImage = image; } auto intensityProfile = mitk::ComputeIntensityProfile(inputImage, maskPlanarFigure); // Don't show histogram for intensity profiles m_Controls.groupBox_histogram->setVisible(false); m_Controls.groupBox_intensityProfile->setVisible(true); m_Controls.widget_intensityProfile->Reset(); m_Controls.widget_intensityProfile->SetIntensityProfile(intensityProfile.GetPointer(), "Intensity Profile of " + m_selectedImageNode->GetName()); } void QmitkImageStatisticsView::ResetGUI() { m_Controls.widget_statistics->Reset(); m_Controls.widget_statistics->setEnabled(false); m_Controls.widget_histogram->Reset(); m_Controls.widget_histogram->setEnabled(false); m_Controls.checkBox_ignoreZero->setEnabled(false); } void QmitkImageStatisticsView::ResetGUIDefault() { m_Controls.widget_histogram->ResetDefault(); m_Controls.checkBox_ignoreZero->setChecked(false); } -std::string QmitkImageStatisticsView::GenerateStatisticsNodeName(mitk::DataNode::ConstPointer image, - mitk::DataNode::ConstPointer mask) +std::string QmitkImageStatisticsView::GenerateStatisticsNodeName() { auto statisticsNodeName = m_selectedImageNode->GetName(); if (m_selectedMaskNode) { statisticsNodeName += "_" + m_selectedMaskNode->GetName(); } statisticsNodeName += "_statistics"; return statisticsNodeName; } mitk::DataNode::Pointer QmitkImageStatisticsView::GetNodeForStatisticsContainer( mitk::ImageStatisticsContainer::ConstPointer container) { if (!container) { mitkThrow() << "Given container is null!"; } auto allDataNodes = this->GetDataStorage()->GetAll()->CastToSTLConstContainer(); for (auto node : allDataNodes) { auto nodeData = node->GetData(); if (nodeData && nodeData->GetUID() == container->GetUID()) { return node; } } mitkThrow() << "No DataNode is found which holds the given statistics container!"; } void QmitkImageStatisticsView::HandleExistingStatistics(mitk::Image::ConstPointer image, mitk::BaseData::ConstPointer mask, mitk::ImageStatisticsContainer::Pointer statistic) { auto imageStatistics = mitk::ImageStatisticsContainerManager::GetImageStatistics( this->GetDataStorage(), image, mask); // if statistics base data already exist: add to existing node if (imageStatistics) { auto node = GetNodeForStatisticsContainer(imageStatistics); node->SetData(statistic); } // statistics base data does not exist: add new node else { - auto statisticsNodeName = GenerateStatisticsNodeName(m_selectedImageNode, m_selectedMaskNode); + auto statisticsNodeName = GenerateStatisticsNodeName(); auto statisticsNode = mitk::CreateImageStatisticsNode(statistic, statisticsNodeName); this->GetDataStorage()->Add(statisticsNode); } } void QmitkImageStatisticsView::SetupRelationRules(mitk::ImageStatisticsContainer::Pointer statistic, mitk::BaseData::ConstPointer mask) { auto imageRule = mitk::StatisticsToImageRelationRule::New(); imageRule->Connect(statistic, m_CalculationJob->GetStatisticsImage()); if (mask) { auto maskRule = mitk::StatisticsToMaskRelationRule::New(); maskRule->Connect(statistic, mask); } } void QmitkImageStatisticsView::OnStatisticsCalculationEnds() { mitk::StatusBar::GetInstance()->Clear(); auto image = m_CalculationJob->GetStatisticsImage(); // get mask mitk::BaseData::ConstPointer mask = nullptr; if (m_CalculationJob->GetMaskImage()) { mask = m_CalculationJob->GetMaskImage(); } else if (m_CalculationJob->GetPlanarFigure()) { mask = m_CalculationJob->GetPlanarFigure(); } // get current statistics auto currentImageStatistics = mitk::ImageStatisticsContainerManager::GetImageStatistics(this->GetDataStorage(), image, mask); if (this->m_CalculationJob->GetStatisticsUpdateSuccessFlag()) // case: calculation was successfull { auto statistic = m_CalculationJob->GetStatisticsData(); SetupRelationRules(statistic, mask); // checks for existing statistic, and add it to data manager HandleExistingStatistics(image, mask, statistic); if (!m_selectedPlanarFigure || m_selectedPlanarFigure->IsClosed()) { this->FillHistogramWidget({m_CalculationJob->GetTimeStepHistogram()}, {m_selectedImageNode->GetName()}); } } else // case: calculation was not successfull { // handle histogram - HistogramType::ConstPointer emptyHistogram = HistogramType::New(); + const HistogramType* emptyHistogram = HistogramType::New(); this->FillHistogramWidget({emptyHistogram}, {m_selectedImageNode->GetName()}); // handle statistics mitk::ImageStatisticsContainer::Pointer statistic = mitk::ImageStatisticsContainer::New(); statistic->SetTimeGeometry(const_cast(image->GetTimeGeometry())); // add empty histogram to stastistics for all timesteps for (unsigned int i = 0; i < image->GetTimeSteps(); ++i) { auto statisticObject = mitk::ImageStatisticsContainer::ImageStatisticsObject(); statisticObject.m_Histogram = emptyHistogram; statistic->SetStatisticsForTimeStep(i, statisticObject); } SetupRelationRules(statistic, mask); HandleExistingStatistics(image, mask, statistic); mitk::StatusBar::GetInstance()->DisplayErrorText(m_CalculationJob->GetLastErrorMessage().c_str()); m_Controls.widget_histogram->setEnabled(false); } m_Controls.label_currentlyComputingStatistics->setVisible(false); } void QmitkImageStatisticsView::OnRequestHistogramUpdate(unsigned int nBins) { m_CalculationJob->SetHistogramNBins(nBins); m_CalculationJob->start(); } void QmitkImageStatisticsView::CalculateStatistics(const mitk::Image *image, const mitk::Image *mask, const mitk::PlanarFigure *maskPlanarFigure) { this->m_CalculationJob->Initialize(image, mask, maskPlanarFigure); try { // Compute statistics this->m_CalculationJob->start(); m_Controls.label_currentlyComputingStatistics->setVisible(true); } catch (const mitk::Exception &e) { mitk::StatusBar::GetInstance()->DisplayErrorText(e.GetDescription()); m_Controls.label_currentlyComputingStatistics->setVisible(false); } catch (const std::runtime_error &e) { mitk::StatusBar::GetInstance()->DisplayErrorText(e.what()); m_Controls.label_currentlyComputingStatistics->setVisible(false); } catch (const std::exception &e) { mitk::StatusBar::GetInstance()->DisplayErrorText(e.what()); m_Controls.label_currentlyComputingStatistics->setVisible(false); } } void QmitkImageStatisticsView::OnSelectionChanged(berry::IWorkbenchPart::Pointer part, const QList &nodes) { Q_UNUSED(part); Q_UNUSED(nodes); } void QmitkImageStatisticsView::PrepareDataStorageComboBoxes() { auto isPlanarFigurePredicate = mitk::GetImageStatisticsPlanarFigurePredicate(); auto isMaskPredicate = mitk::GetImageStatisticsMaskPredicate(); auto isImagePredicate = mitk::GetImageStatisticsImagePredicate(); auto isMaskOrPlanarFigurePredicate = mitk::NodePredicateOr::New(isPlanarFigurePredicate, isMaskPredicate); m_Controls.imageSelector->SetDataStorage(GetDataStorage()); m_Controls.imageSelector->SetPredicate(isImagePredicate); m_Controls.maskImageSelector->SetDataStorage(GetDataStorage()); m_Controls.maskImageSelector->SetPredicate(isMaskOrPlanarFigurePredicate); m_Controls.maskImageSelector->SetZeroEntryText(""); } void QmitkImageStatisticsView::Activated() {} void QmitkImageStatisticsView::Deactivated() {} void QmitkImageStatisticsView::Visible() { connect(this->m_Controls.imageSelector, static_cast(&QComboBox::currentIndexChanged), this, &QmitkImageStatisticsView::OnImageSelectorChanged); connect(this->m_Controls.maskImageSelector, static_cast(&QComboBox::currentIndexChanged), this, &QmitkImageStatisticsView::OnMaskSelectorChanged); OnImageSelectorChanged(); OnMaskSelectorChanged(); } void QmitkImageStatisticsView::Hidden() { m_Controls.imageSelector->disconnect(); m_Controls.maskImageSelector->disconnect(); } void QmitkImageStatisticsView::SetFocus() {} diff --git a/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.h b/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.h index 12a0516112..4f2bfef54a 100644 --- a/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.h +++ b/Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.h @@ -1,124 +1,124 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef QmitkImageStatisticsView_H__INCLUDED #define QmitkImageStatisticsView_H__INCLUDED #include "ui_QmitkImageStatisticsViewControls.h" // Qmitk includes #include #include #include #include #include #include /*! \brief QmitkImageStatisticsView is a bundle that allows statistics calculation from images. Three modes are supported: 1. Statistics of one image, 2. Statistics of an image and a segmentation, 3. Statistics of an image and a Planar Figure. The statistics calculation is realized in a separate thread to keep the gui accessible during calculation. \ingroup Plugins/org.mitk.gui.qt.measurementtoolbox */ class QmitkImageStatisticsView : public QmitkAbstractView, public mitk::ILifecycleAwarePart, public berry::IPartListener { Q_OBJECT public: /*! \brief default constructor */ QmitkImageStatisticsView(QObject *parent = nullptr, const char *name = nullptr); /*! \brief default destructor */ virtual ~QmitkImageStatisticsView(); /*! \brief method for creating the widget containing the application controls, like sliders, buttons etc. */ virtual void CreateQtPartControl(QWidget *parent) override; /*! \brief Is called from the selection mechanism once the data manager selection has changed*/ void OnSelectionChanged(berry::IWorkbenchPart::Pointer part, const QList &selectedNodes) override; static const std::string VIEW_ID; protected: using HistogramType = mitk::ImageStatisticsContainer::HistogramType; virtual void Activated() override; virtual void Deactivated() override; virtual void Visible() override; virtual void Hidden() override; virtual void SetFocus() override; /** \brief Is called right before the view closes (before the destructor) */ virtual void PartClosed(const berry::IWorkbenchPartReference::Pointer&) override; /** \brief Required for berry::IPartListener */ virtual Events::Types GetPartEventTypes() const override { return Events::CLOSED; } void OnImageSelectorChanged(); void OnMaskSelectorChanged(); void CalculateOrGetStatistics(); void CalculateStatistics(const mitk::Image* image, const mitk::Image* mask = nullptr, const mitk::PlanarFigure* maskPlanarFigure = nullptr); void ComputeAndDisplayIntensityProfile(mitk::Image * image, mitk::PlanarFigure* maskPlanarFigure); void FillHistogramWidget(const std::vector &histogram, const std::vector &dataLabels); QmitkChartWidget::ColorTheme GetColorTheme() const; void ResetGUI(); void ResetGUIDefault(); void PrepareDataStorageComboBoxes(); /*! \brief method for creating the connections of main and control widget */ virtual void CreateConnections(); void OnStatisticsCalculationEnds(); void OnRequestHistogramUpdate(unsigned int nBins); void OnCheckBoxIgnoreZeroStateChanged(int state); void OnSliderWidgetHistogramChanged(double value); void OnSliderWidgetIntensityProfileChanged(); // member variable Ui::QmitkImageStatisticsViewControls m_Controls; private: - std::string GenerateStatisticsNodeName(mitk::DataNode::ConstPointer image, mitk::DataNode::ConstPointer mask); + std::string GenerateStatisticsNodeName(); void HandleExistingStatistics(mitk::Image::ConstPointer image, mitk::BaseData::ConstPointer mask, mitk::ImageStatisticsContainer::Pointer); void SetupRelationRules(mitk::ImageStatisticsContainer::Pointer, mitk::BaseData::ConstPointer mask); mitk::DataNode::Pointer GetNodeForStatisticsContainer(mitk::ImageStatisticsContainer::ConstPointer container); typedef itk::SimpleMemberCommand< QmitkImageStatisticsView > ITKCommandType; QmitkImageStatisticsCalculationJob * m_CalculationJob = nullptr; mitk::DataNode::ConstPointer m_selectedImageNode = nullptr, m_selectedMaskNode = nullptr; mitk::PlanarFigure::Pointer m_selectedPlanarFigure=nullptr; long m_PlanarFigureObserverTag; bool m_ForceRecompute = false; }; #endif // QmitkImageStatisticsView_H__INCLUDED