diff --git a/Modules/Core/include/mitkLookupTable.h b/Modules/Core/include/mitkLookupTable.h index ccb18e3cd0..52908c3fe9 100644 --- a/Modules/Core/include/mitkLookupTable.h +++ b/Modules/Core/include/mitkLookupTable.h @@ -1,278 +1,276 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef mitkLookupTable_h #define mitkLookupTable_h #include "mitkCommon.h" #include #include #include #include #include class vtkColorTransferFunction; class vtkPiecewiseFunction; namespace mitk { /** * @brief The LookupTable class mitk wrapper for a vtkLookupTable * @ingroup DataManagement * * This class can be used to color images with a LookupTable, such as the * vtkLookupTable. * @note If you want to use this as a property for an mitk::Image, make sure * to use the mitk::LookupTableProperty and set the mitk::RenderingModeProperty * to a mode which supports lookup tables (e.g. LOOKUPTABLE_COLOR). Make * sure to check the documentation of the mitk::RenderingModeProperty. For a * code example how to use the mitk::LookupTable check the * mitkImageVtkMapper2DLookupTableTest.cpp in Core\Code\Testing. */ class MITKCORE_EXPORT LookupTable : public itk::DataObject { public: /** * @brief RawLookupTableType raw lookuptable typedef for convenience. */ typedef unsigned char RawLookupTableType; mitkClassMacroItkParent(LookupTable, itk::DataObject); itkFactorylessNewMacro(Self) itkCloneMacro(Self) /** * @brief GetVtkLookupTable Getter for the internally wrapped vtkLookupTable. */ virtual vtkSmartPointer GetVtkLookupTable() const; /** * @brief GetRawLookupTable Getter for the raw lookuptable array. */ virtual RawLookupTableType *GetRawLookupTable() const; /** * @brief SetVtkLookupTable Setter for the internal lookuptable. * @param lut The lookuptable. */ virtual void SetVtkLookupTable(vtkSmartPointer lut); /** * @brief ChangeOpacityForAll Set the opacity for all table values. * @param opacity Opacity between 0.0 and 1.0. */ virtual void ChangeOpacityForAll(float opacity); /** * @brief ChangeOpacity Set the opacity for a specific table index. * @param index The lookuptable index. * @param opacity Opacity between 0.0 and 1.0. */ virtual void ChangeOpacity(int index, float opacity); /** * @brief GetColor convenience method wrapping the vtkLookupTable::GetColor() method. * * Map one value through the lookup table and return the color as an RGB array of doubles between 0 and 1. * @param value The value you want to map. * @param rgb RGB values between 0 and 1. */ virtual void GetColor(double value, double rgb[3]); /** * @brief GetTableValue convenience method wrapping the vtkLookupTable::GetTableValue() method. * @param index The index you want to get. * @param rgba RGB values between 0 and 1. */ virtual void GetTableValue(int index, double rgba[4]); /** * @brief SetTableValue convenience method wrapping the vtkLookupTable::SetTableValue() method. * @param index The index you want to set. * @param rgba RGB values between 0 and 1. */ virtual void SetTableValue(int index, double rgba[4]); itkSetMacro(Window, float); itkSetMacro(Level, float); itkSetMacro(Opacity, float); /** * @brief equality operator implementation */ virtual bool operator==(const mitk::LookupTable &LookupTable) const; /** * @brief non equality operator implementation */ virtual bool operator!=(const LookupTable &LookupTable) const; /** * @brief implementation necessary because operator made * private in itk::Object */ virtual LookupTable &operator=(const LookupTable &LookupTable); /** * @brief Updates the output information of the current object by calling * updateOutputInformation of the data objects source object. */ void UpdateOutputInformation() override; /** * @brief Sets the requested Region to the largest possible region. * This method is not implemented, since this is the default * behavior of the itk pipeline and we do not support the * requested-region mechanism for lookup-tables */ void SetRequestedRegionToLargestPossibleRegion() override; /** * @brief Checks, if the requested region lies outside of the buffered region by * calling verifyRequestedRegion(). */ bool RequestedRegionIsOutsideOfTheBufferedRegion() override; /** * @brief Checks if the requested region is completely contained in * the buffered region. Since we always want to process the lookup * table as a whole, this method always returns true */ bool VerifyRequestedRegion() override; /** * @brief This method has no effect for lookup tables, since we do * not support the region-mechanism */ void SetRequestedRegion(const itk::DataObject *data) override; LookupTable(); ~LookupTable() override; /** * \deprecatedSince{2014_03} Please use CreateColorTransferFunction() instead */ DEPRECATED(void CreateColorTransferFunction(vtkColorTransferFunction *&colorFunction)); /** * \deprecatedSince{2014_03} Please use CreateOpacityTransferFunction() instead */ DEPRECATED(void CreateOpacityTransferFunction(vtkPiecewiseFunction *&opacityFunction)); /** * \deprecatedSince{2014_03} Please use CreateGradientTransferFunction() instead */ DEPRECATED(void CreateGradientTransferFunction(vtkPiecewiseFunction *&gradientFunction)); vtkSmartPointer CreateColorTransferFunction(); vtkSmartPointer CreateOpacityTransferFunction(); vtkSmartPointer CreateGradientTransferFunction(); /** * @brief The LookupTableType enum for different predefined lookup tables. * * \li GRAYSCALE Our default level-window (sometimes referred to as window-level by other sources) setup for a test * image looks like this: * \image html ExampleLevelWindowColor.png * \li INVERSE_GRAYSCALE Inverse LookupTable of GRAYSCALE. * \li HOT_IRON A LookupTable for red colors. * \li JET A LookupTable for JET color rendering. * \li LEGACY_BINARY A LookupTable for binary images. * \li LEGACY_RAINBOW_COLOR A rainbow-like LookupTable. * \li MULTILABEL A LookupTable for multilabel images. * \li PET_COLOR A LookupTable for PET color rendering. * \li PET_20 A LookupTable for PET_20 color rendering. * * The different LookupTableTypes can be applied in the MitkWorkbench via right-clicking * on an image and choosing a color map. */ enum LookupTableType { GRAYSCALE, INVERSE_GRAYSCALE, HOT_IRON, JET, JET_TRANSPARENT, PLASMA, INFERNO, VIRIDIS, MAGMA, LEGACY_BINARY, LEGACY_RAINBOW_COLOR, MULTILABEL, PET_COLOR, PET_20 }; static std::vector typenameList; /** * @brief Set the look-up table type by enum (or integer). * @details Returns if the given type doesn't exist. Only changes the type if it is different * from the current one. */ virtual void SetType(const LookupTableType type); /** * @brief Set the look-up table type by string. * @details Returns if the given type doesn't exist. Only changes the type if it is different * from the current one. */ virtual void SetType(const std::string &typeName); /** * @brief Return the current look-up table type. */ virtual LookupTableType GetActiveType() const; /** * @brief Return the current look-up table type as a string. */ virtual std::string GetActiveTypeAsString() const; protected: void PrintSelf(std::ostream &os, itk::Indent indent) const override; LookupTable(const LookupTable &other); virtual void BuildGrayScaleLookupTable(); virtual void BuildLegacyBinaryLookupTable(); virtual void BuildLegacyRainbowColorLookupTable(); virtual void BuildInverseGrayScaleLookupTable(); virtual void BuildHotIronLookupTable(); virtual void BuildPlasmaLookupTable(); virtual void BuildInfernoLookupTable(); virtual void BuildViridisLookupTable(); virtual void BuildMagmaLookupTable(); virtual void BuildJetLookupTable(bool transparent = false); virtual void BuildPETColorLookupTable(); virtual void BuildPET20LookupTable(); virtual void BuildMultiLabelLookupTable(); vtkSmartPointer m_LookupTable; float m_Window; - float m_Level; - float m_Opacity; LookupTableType m_Type; private: itk::LightObject::Pointer InternalClone() const override; }; } // namespace mitk #endif /* mitkLookupTable_h */ diff --git a/Modules/Core/src/DataManagement/mitkLookupTable.cpp b/Modules/Core/src/DataManagement/mitkLookupTable.cpp index 88cd6becd8..8c54985a34 100644 --- a/Modules/Core/src/DataManagement/mitkLookupTable.cpp +++ b/Modules/Core/src/DataManagement/mitkLookupTable.cpp @@ -1,643 +1,651 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "mitkLookupTable.h" #include #include #include #include #include #include #include #include #include #include #include #include #include std::vector mitk::LookupTable::typenameList = { "Grayscale", "Inverse Grayscale", "Hot Iron", "Jet", "Jet Transparent", "Plasma", "Inferno", "Viridis", "Magma", "Legacy Binary", "Legacy Rainbow Color", "Multilabel", "PET Color", "PET 20" }; -mitk::LookupTable::LookupTable() : m_Window(0.0), m_Level(0.0), m_Opacity(1.0), m_Type(mitk::LookupTable::GRAYSCALE) +mitk::LookupTable::LookupTable() + : m_LookupTable(vtkSmartPointer::New()) + , m_Window(0.0) + , m_Level(0.0) + , m_Opacity(1.0) + , m_Type(mitk::LookupTable::GRAYSCALE) { - m_LookupTable = vtkSmartPointer::New(); this->BuildGrayScaleLookupTable(); } mitk::LookupTable::LookupTable(const LookupTable &other) - : itk::DataObject(), m_LookupTable(vtkSmartPointer::New()) + : itk::DataObject() + , m_LookupTable(vtkSmartPointer::New()) + , m_Window(other.m_Window) + , m_Level(other.m_Level) + , m_Opacity(other.m_Opacity) + , m_Type(other.m_Type) { m_LookupTable->DeepCopy(other.m_LookupTable); } mitk::LookupTable::~LookupTable() { } void mitk::LookupTable::SetVtkLookupTable(vtkSmartPointer lut) { if ((!lut) || (m_LookupTable == lut)) { return; } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::SetType(const mitk::LookupTable::LookupTableType type) { if (m_Type == type) return; switch (type) { case (mitk::LookupTable::GRAYSCALE): this->BuildGrayScaleLookupTable(); break; case (mitk::LookupTable::INVERSE_GRAYSCALE): this->BuildInverseGrayScaleLookupTable(); break; case (mitk::LookupTable::HOT_IRON): this->BuildHotIronLookupTable(); break; case (mitk::LookupTable::JET): this->BuildJetLookupTable(); break; case (mitk::LookupTable::JET_TRANSPARENT): this->BuildJetLookupTable(true); break; case (mitk::LookupTable::PLASMA): this->BuildPlasmaLookupTable(); break; case (mitk::LookupTable::INFERNO): this->BuildInfernoLookupTable(); break; case (mitk::LookupTable::VIRIDIS): this->BuildViridisLookupTable(); break; case (mitk::LookupTable::MAGMA): this->BuildMagmaLookupTable(); break; case (mitk::LookupTable::LEGACY_BINARY): this->BuildLegacyBinaryLookupTable(); break; case (mitk::LookupTable::MULTILABEL): this->BuildMultiLabelLookupTable(); break; case (mitk::LookupTable::PET_COLOR): this->BuildPETColorLookupTable(); break; case (mitk::LookupTable::PET_20): this->BuildPET20LookupTable(); break; case (mitk::LookupTable::LEGACY_RAINBOW_COLOR): this->BuildLegacyRainbowColorLookupTable(); break; default: MITK_ERROR << "non-existing colormap"; return; } m_Type = type; } void mitk::LookupTable::SetType(const std::string &typeName) { for (size_t i = 0; i < typenameList.size(); ++i) { if (typenameList.at(i) == typeName) { this->SetType(static_cast(i)); } - } } mitk::LookupTable::LookupTableType mitk::LookupTable::GetActiveType() const { return m_Type; } std::string mitk::LookupTable::GetActiveTypeAsString() const { if (static_cast(m_Type) < typenameList.size()) { return typenameList.at(m_Type); } return ""; } void mitk::LookupTable::ChangeOpacityForAll(float opacity) { int noValues = m_LookupTable->GetNumberOfTableValues(); double rgba[4]; for (int i = 0; i < noValues; i++) { m_LookupTable->GetTableValue(i, rgba); rgba[3] = opacity; m_LookupTable->SetTableValue(i, rgba); } this->Modified(); // need to call modified, since LookupTableProperty seems to be unchanged so no widget-update is // executed } void mitk::LookupTable::ChangeOpacity(int index, float opacity) { int noValues = m_LookupTable->GetNumberOfTableValues(); if (index > noValues) { MITK_INFO << "could not change opacity. index exceed size of lut ... " << std::endl; return; } double rgba[4]; m_LookupTable->GetTableValue(index, rgba); rgba[3] = opacity; m_LookupTable->SetTableValue(index, rgba); this->Modified(); // need to call modified, since LookupTableProperty seems to be unchanged so no widget-update is // executed } void mitk::LookupTable::GetColor(double value, double rgb[3]) { this->GetVtkLookupTable()->GetColor(value, rgb); } void mitk::LookupTable::GetTableValue(int index, double rgba[4]) { this->GetVtkLookupTable()->GetTableValue(index, rgba); } void mitk::LookupTable::SetTableValue(int index, double rgba[4]) { this->GetVtkLookupTable()->SetTableValue(index, rgba); } vtkSmartPointer mitk::LookupTable::GetVtkLookupTable() const { return m_LookupTable; } mitk::LookupTable::RawLookupTableType *mitk::LookupTable::GetRawLookupTable() const { return m_LookupTable->GetPointer(0); } bool mitk::LookupTable::operator==(const mitk::LookupTable &other) const { if (m_LookupTable == other.GetVtkLookupTable()) return true; vtkLookupTable *olut = other.GetVtkLookupTable(); if (olut == nullptr) return false; bool equal = (m_LookupTable->GetNumberOfColors() == olut->GetNumberOfColors()) && (m_LookupTable->GetTableRange()[0] == olut->GetTableRange()[0]) && (m_LookupTable->GetTableRange()[1] == olut->GetTableRange()[1]) && (m_LookupTable->GetHueRange()[0] == olut->GetHueRange()[0]) && (m_LookupTable->GetHueRange()[1] == olut->GetHueRange()[1]) && (m_LookupTable->GetSaturationRange()[0] == olut->GetSaturationRange()[0]) && (m_LookupTable->GetSaturationRange()[1] == olut->GetSaturationRange()[1]) && (m_LookupTable->GetValueRange()[0] == olut->GetValueRange()[0]) && (m_LookupTable->GetValueRange()[1] == olut->GetValueRange()[1]) && (m_LookupTable->GetAlphaRange()[0] == olut->GetAlphaRange()[0]) && (m_LookupTable->GetAlphaRange()[1] == olut->GetAlphaRange()[1]) && (m_LookupTable->GetRamp() == olut->GetRamp()) && (m_LookupTable->GetScale() == olut->GetScale()) && (m_LookupTable->GetAlpha() == olut->GetAlpha()) && (m_LookupTable->GetTable()->GetNumberOfTuples() == olut->GetTable()->GetNumberOfTuples()); if (equal == false) return false; for (vtkIdType i = 0; i < m_LookupTable->GetNumberOfTableValues(); i++) { bool tvequal = (m_LookupTable->GetTableValue(i)[0] == olut->GetTableValue(i)[0]) && (m_LookupTable->GetTableValue(i)[1] == olut->GetTableValue(i)[1]) && (m_LookupTable->GetTableValue(i)[2] == olut->GetTableValue(i)[2]) && (m_LookupTable->GetTableValue(i)[3] == olut->GetTableValue(i)[3]); if (tvequal == false) return false; } return true; } bool mitk::LookupTable::operator!=(const mitk::LookupTable &other) const { return !(*this == other); } mitk::LookupTable &mitk::LookupTable::operator=(const mitk::LookupTable &LookupTable) { if (this == &LookupTable) { return *this; } else { m_LookupTable = LookupTable.GetVtkLookupTable(); return *this; } } void mitk::LookupTable::UpdateOutputInformation() { if (this->GetSource()) { this->GetSource()->UpdateOutputInformation(); } } void mitk::LookupTable::SetRequestedRegionToLargestPossibleRegion() { } bool mitk::LookupTable::RequestedRegionIsOutsideOfTheBufferedRegion() { return false; } bool mitk::LookupTable::VerifyRequestedRegion() { // normally we should check if the requested region lies within the // largest possible region. Since for lookup-tables we assume, that the // requested region is always the largest possible region, we can always // return true! return true; } void mitk::LookupTable::SetRequestedRegion(const itk::DataObject *) { // not implemented, since we always want to have the RequestedRegion // to be set to LargestPossibleRegion } vtkSmartPointer mitk::LookupTable::CreateColorTransferFunction() { vtkSmartPointer colorFunction = vtkSmartPointer::New(); mitk::LookupTable::RawLookupTableType *rawLookupTable = this->GetRawLookupTable(); int num_of_values = m_LookupTable->GetNumberOfTableValues(); auto cols = new double[3 * num_of_values]; double *colsHead = cols; for (int i = 0; i < num_of_values; ++i) { *cols = static_cast(*rawLookupTable) / 255.0; ++cols; ++rawLookupTable; *cols = static_cast(*rawLookupTable) / 255.0; ++cols; ++rawLookupTable; *cols = static_cast(*rawLookupTable) / 255.0; ++cols; ++rawLookupTable; ++rawLookupTable; } colorFunction->BuildFunctionFromTable( m_LookupTable->GetTableRange()[0], m_LookupTable->GetTableRange()[1], num_of_values, colsHead); return colorFunction; } void mitk::LookupTable::CreateColorTransferFunction(vtkColorTransferFunction *&colorFunction) { colorFunction = this->CreateColorTransferFunction(); } vtkSmartPointer mitk::LookupTable::CreateOpacityTransferFunction() { vtkSmartPointer opacityFunction = vtkSmartPointer::New(); mitk::LookupTable::RawLookupTableType *rgba = this->GetRawLookupTable(); int num_of_values = m_LookupTable->GetNumberOfTableValues(); auto alphas = new double[num_of_values]; double *alphasHead = alphas; rgba += 3; for (int i = 0; i < num_of_values; ++i) { *alphas = static_cast(*rgba) / 255.0; ++alphas; rgba += 4; } opacityFunction->BuildFunctionFromTable( m_LookupTable->GetTableRange()[0], m_LookupTable->GetTableRange()[1], num_of_values, alphasHead); return opacityFunction; } void mitk::LookupTable::CreateOpacityTransferFunction(vtkPiecewiseFunction *&opacityFunction) { opacityFunction = this->CreateOpacityTransferFunction(); } vtkSmartPointer mitk::LookupTable::CreateGradientTransferFunction() { vtkSmartPointer gradientFunction = vtkSmartPointer::New(); mitk::LookupTable::RawLookupTableType *rgba = this->GetRawLookupTable(); int num_of_values = m_LookupTable->GetNumberOfTableValues(); auto alphas = new double[num_of_values]; double *alphasHead = alphas; rgba += 3; for (int i = 0; i < num_of_values; ++i) { *alphas = static_cast(*rgba) / 255.0; ++alphas; rgba += 4; } gradientFunction->BuildFunctionFromTable( m_LookupTable->GetTableRange()[0], m_LookupTable->GetTableRange()[1], num_of_values, alphasHead); return gradientFunction; } void mitk::LookupTable::CreateGradientTransferFunction(vtkPiecewiseFunction *&gradientFunction) { gradientFunction = this->CreateGradientTransferFunction(); } void mitk::LookupTable::PrintSelf(std::ostream &os, itk::Indent indent) const { os << indent; m_LookupTable->PrintHeader(os, vtkIndent()); } itk::LightObject::Pointer mitk::LookupTable::InternalClone() const { itk::LightObject::Pointer result(new Self(*this)); result->UnRegister(); return result; } void mitk::LookupTable::BuildGrayScaleLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetRampToLinear(); lut->SetSaturationRange(0.0, 0.0); lut->SetHueRange(0.0, 0.0); lut->SetValueRange(0.0, 1.0); lut->Build(); m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildLegacyBinaryLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetRampToLinear(); lut->SetSaturationRange(0.0, 0.0); lut->SetHueRange(0.0, 0.0); lut->SetValueRange(0.0, 1.0); lut->Build(); lut->SetTableValue(0, 0.0, 0.0, 0.0, 0.0); m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildInverseGrayScaleLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetTableRange(0, 1); lut->SetSaturationRange(0, 0); lut->SetHueRange(0, 0); lut->SetValueRange(1, 0); lut->SetAlphaRange(1, 0); lut->Build(); m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildHotIronLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->Build(); for (int i = 0; i < 256; i++) { lut->SetTableValue( i, (double)HotIron[i][0] / 255.0, (double)HotIron[i][1] / 255.0, (double)HotIron[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildJetLookupTable(bool transparent) { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->Build(); int i = 0; if (transparent) { // Lowest intensity is transparent lut->SetTableValue(0, (double)Jet[0][0] / 255.0, (double)Jet[0][1] / 255.0, (double)Jet[0][2] / 255.0, 0.0); i = 1; } for (; i < 256; i++) { lut->SetTableValue(i, (double)Jet[i][0] / 255.0, (double)Jet[i][1] / 255.0, (double)Jet[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildPETColorLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->SetTableRange((m_Level - m_Window / 2.0), (m_Level + m_Window / 2.0)); lut->Build(); for (int i = 0; i < 256; i++) { lut->SetTableValue( i, (double)PETColor[i][0] / 255.0, (double)PETColor[i][1] / 255.0, (double)PETColor[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildPET20LookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->SetTableRange((m_Level - m_Window / 2.0), (m_Level + m_Window / 2.0)); lut->Build(); for (int i = 0; i < 256; i++) { lut->SetTableValue(i, (double)PET20[i][0] / 255.0, (double)PET20[i][1] / 255.0, (double)PET20[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildMultiLabelLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(65536); lut->SetTableRange(0, 65536); lut->Build(); lut->SetTableValue(0, 0.0, 0.0, 0.0, 0.0); // background for (int i = 0; i < 25; i++) { lut->SetTableValue(i+1, Multilabel[i][0], Multilabel[i][1], Multilabel[i][2], 0.4); } for (int i = 26; i < 65536; i++) { if (i % 12 == 0) lut->SetTableValue(i, 1.0, 0.0, 0.0, 0.4); else if (i % 12 == 1) lut->SetTableValue(i, 0.0, 1.0, 0.0, 0.4); else if (i % 12 == 2) lut->SetTableValue(i, 0.0, 0.0, 1.0, 0.4); else if (i % 12 == 3) lut->SetTableValue(i, 1.0, 1.0, 0.0, 0.4); else if (i % 12 == 4) lut->SetTableValue(i, 0.0, 1.0, 1.0, 0.4); else if (i % 12 == 5) lut->SetTableValue(i, 1.0, 0.0, 1.0, 0.4); else if (i % 12 == 6) lut->SetTableValue(i, 1.0, 0.5, 0.0, 0.4); else if (i % 12 == 7) lut->SetTableValue(i, 0.0, 1.0, 0.5, 0.4); else if (i % 12 == 8) lut->SetTableValue(i, 0.5, 0.0, 1.0, 0.4); else if (i % 12 == 9) lut->SetTableValue(i, 1.0, 1.0, 0.5, 0.4); else if (i % 12 == 10) lut->SetTableValue(i, 0.5, 1.0, 1.0, 0.4); else if (i % 12 == 11) lut->SetTableValue(i, 1.0, 0.5, 1.0, 0.4); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildLegacyRainbowColorLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetRampToLinear(); lut->SetHueRange(0.6667, 0.0); lut->SetTableRange(0.0, 20.0); lut->Build(); m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildPlasmaLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->Build(); for (int i = 0; i < 256; i++) { lut->SetTableValue( i, (double)Plasma[i][0] / 255.0, (double)Plasma[i][1] / 255.0, (double)Plasma[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildInfernoLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->Build(); for (int i = 0; i < 256; i++) { lut->SetTableValue( i, (double)Inferno[i][0] / 255.0, (double)Inferno[i][1] / 255.0, (double)Inferno[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildViridisLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->Build(); for (int i = 0; i < 256; i++) { lut->SetTableValue( i, (double)Viridis[i][0] / 255.0, (double)Viridis[i][1] / 255.0, (double)Viridis[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } void mitk::LookupTable::BuildMagmaLookupTable() { vtkSmartPointer lut = vtkSmartPointer::New(); lut->SetNumberOfTableValues(256); lut->Build(); for (int i = 0; i < 256; i++) { lut->SetTableValue( i, (double)Magma[i][0] / 255.0, (double)Magma[i][1] / 255.0, (double)Magma[i][2] / 255.0, 1.0); } m_LookupTable = lut; this->Modified(); } diff --git a/Plugins/org.mitk.gui.qt.application/src/QmitkDataNodeColorMapAction.cpp b/Plugins/org.mitk.gui.qt.application/src/QmitkDataNodeColorMapAction.cpp index 46da8c754f..f085fe0793 100644 --- a/Plugins/org.mitk.gui.qt.application/src/QmitkDataNodeColorMapAction.cpp +++ b/Plugins/org.mitk.gui.qt.application/src/QmitkDataNodeColorMapAction.cpp @@ -1,162 +1,162 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include // mitk core #include #include #include #include #include // mitk gui common plugin #include // qt #include QmitkDataNodeColorMapAction::QmitkDataNodeColorMapAction(QWidget* parent, berry::IWorkbenchPartSite::Pointer workbenchpartSite) : QAction(parent) , QmitkAbstractDataNodeAction(workbenchpartSite) { setText(tr("Colormap")); InitializeAction(); } QmitkDataNodeColorMapAction::QmitkDataNodeColorMapAction(QWidget* parent, berry::IWorkbenchPartSite* workbenchpartSite) : QAction(parent) , QmitkAbstractDataNodeAction(berry::IWorkbenchPartSite::Pointer(workbenchpartSite)) { setText(tr("Colormap")); InitializeAction(); } void QmitkDataNodeColorMapAction::InitializeAction() { setCheckable(true); setMenu(new QMenu); connect(menu(), &QMenu::aboutToShow, this, &QmitkDataNodeColorMapAction::OnMenuAboutShow); } void QmitkDataNodeColorMapAction::OnMenuAboutShow() { auto dataNode = GetSelectedNode(); if (dataNode.IsNull()) { return; } mitk::BaseRenderer::Pointer baseRenderer = GetBaseRenderer(); mitk::LookupTableProperty::Pointer lookupTableProperty = dynamic_cast(dataNode->GetProperty("LookupTable", baseRenderer)); if (lookupTableProperty.IsNull()) { mitk::LookupTable::Pointer mitkLut = mitk::LookupTable::New(); lookupTableProperty = mitk::LookupTableProperty::New(); lookupTableProperty->SetLookupTable(mitkLut); dataNode->SetProperty("LookupTable", lookupTableProperty, baseRenderer); } mitk::LookupTable::Pointer lookupTable = lookupTableProperty->GetValue(); if (lookupTable.IsNull()) { return; } menu()->clear(); QAction* lutAction; for (const auto& lutTypeString : lookupTable->typenameList) { lutAction = menu()->addAction(QString::fromStdString(lutTypeString)); lutAction->setCheckable(true); if (lutTypeString == lookupTable->GetActiveTypeAsString()) { lutAction->setChecked(true); } connect(lutAction, &QAction::triggered, this, &QmitkDataNodeColorMapAction::OnActionTriggered); } } void QmitkDataNodeColorMapAction::OnActionTriggered(bool /*checked*/) { mitk::BaseRenderer::Pointer baseRenderer = GetBaseRenderer(); auto selectedNodes = GetSelectedNodes(); for (auto& dataNode : selectedNodes) { if (dataNode.IsNull()) { continue; } mitk::LookupTableProperty::Pointer lookupTableProperty = dynamic_cast(dataNode->GetProperty("LookupTable", baseRenderer)); if (lookupTableProperty.IsNull()) { continue; } mitk::LookupTable::Pointer lookupTable = lookupTableProperty->GetValue(); if (lookupTable.IsNull()) { continue; } - mitk::LookupTable::Pointer renderWindowSpecificLutTab = lookupTable->Clone(); + mitk::LookupTable::Pointer renderWindowSpecificLuT = lookupTable->Clone(); QAction* senderAction = qobject_cast(QObject::sender()); if (nullptr == senderAction) { continue; } // set lookup table type defined by the action string std::string activatedItem = senderAction->text().toStdString(); - renderWindowSpecificLutTab->SetType(activatedItem); - dataNode->SetProperty("LookupTable", mitk::LookupTableProperty::New(renderWindowSpecificLutTab), baseRenderer); + renderWindowSpecificLuT->SetType(activatedItem); + dataNode->SetProperty("LookupTable", mitk::LookupTableProperty::New(renderWindowSpecificLuT), baseRenderer); if (mitk::LookupTable::LookupTableType::MULTILABEL == lookupTable->GetActiveType()) { // special case: multilabel => set the level window to include the whole pixel range UseWholePixelRange(dataNode); } mitk::RenderingModeProperty::Pointer renderingMode = dynamic_cast(dataNode->GetProperty("Image Rendering.Mode", baseRenderer)); renderingMode->SetValue(mitk::RenderingModeProperty::LOOKUPTABLE_LEVELWINDOW_COLOR); if (nullptr == baseRenderer) { mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } else { mitk::RenderingManager::GetInstance()->RequestUpdate(baseRenderer->GetRenderWindow()); } } } void QmitkDataNodeColorMapAction::UseWholePixelRange(mitk::DataNode* node) { auto image = dynamic_cast(node->GetData()); if (nullptr != image) { mitk::LevelWindow levelWindow; levelWindow.SetToImageRange(image); node->SetLevelWindow(levelWindow); } }