diff --git a/Modules/DiffusionImaging/DiffusionCore/Rendering/mitkOdfVtkMapper2D.txx b/Modules/DiffusionImaging/DiffusionCore/Rendering/mitkOdfVtkMapper2D.txx index c6bc7b0d53..91bb189c78 100644 --- a/Modules/DiffusionImaging/DiffusionCore/Rendering/mitkOdfVtkMapper2D.txx +++ b/Modules/DiffusionImaging/DiffusionCore/Rendering/mitkOdfVtkMapper2D.txx @@ -1,881 +1,882 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef __mitkOdfVtkMapper2D_txx__ #define __mitkOdfVtkMapper2D_txx__ #include "mitkOdfVtkMapper2D.h" #include "mitkDataNode.h" #include "mitkBaseRenderer.h" #include "mitkMatrixConvert.h" #include "mitkGeometry3D.h" #include "mitkTimeGeometry.h" #include "mitkOdfNormalizationMethodProperty.h" #include "mitkOdfScaleByProperty.h" #include "mitkProperties.h" #include "mitkTensorImage.h" #include "vtkSphereSource.h" #include "vtkPropCollection.h" #include "vtkMaskedGlyph3D.h" #include "vtkGlyph2D.h" #include "vtkGlyph3D.h" #include "vtkMaskedProgrammableGlyphFilter.h" #include "vtkImageData.h" #include "vtkLinearTransform.h" #include "vtkCamera.h" #include "vtkPointData.h" #include "vtkTransformPolyDataFilter.h" #include "vtkTransform.h" #include "vtkOdfSource.h" #include "vtkDoubleArray.h" #include "vtkLookupTable.h" #include "vtkProperty.h" #include "vtkPolyDataNormals.h" #include "vtkLight.h" #include "vtkLightCollection.h" #include "vtkMath.h" #include "vtkFloatArray.h" #include "vtkDelaunay2D.h" #include "vtkMapper.h" #include "vtkRenderer.h" #include "itkOrientationDistributionFunction.h" #include "itkFixedArray.h" #include #include "vtkOpenGLRenderer.h" #define _USE_MATH_DEFINES #include template vtkSmartPointer mitk::OdfVtkMapper2D::m_OdfTransform = vtkSmartPointer::New(); template vtkSmartPointer mitk::OdfVtkMapper2D::m_OdfSource = vtkSmartPointer::New(); template float mitk::OdfVtkMapper2D::m_Scaling; template int mitk::OdfVtkMapper2D::m_Normalization; template int mitk::OdfVtkMapper2D::m_ScaleBy; template float mitk::OdfVtkMapper2D::m_IndexParam1; template float mitk::OdfVtkMapper2D::m_IndexParam2; #define ODF_MAPPER_PI M_PI template mitk::OdfVtkMapper2D::LocalStorage::LocalStorage() { m_PropAssemblies.push_back(vtkPropAssembly::New()); m_PropAssemblies.push_back(vtkPropAssembly::New()); m_PropAssemblies.push_back(vtkPropAssembly::New()); m_OdfsPlanes.push_back(vtkAppendPolyData::New()); m_OdfsPlanes.push_back(vtkAppendPolyData::New()); m_OdfsPlanes.push_back(vtkAppendPolyData::New()); m_OdfsPlanes[0]->AddInputData(vtkPolyData::New()); m_OdfsPlanes[1]->AddInputData(vtkPolyData::New()); m_OdfsPlanes[2]->AddInputData(vtkPolyData::New()); m_OdfsActors.push_back(vtkActor::New()); m_OdfsActors.push_back(vtkActor::New()); m_OdfsActors.push_back(vtkActor::New()); m_OdfsActors[0]->GetProperty()->SetInterpolationToGouraud(); m_OdfsActors[1]->GetProperty()->SetInterpolationToGouraud(); m_OdfsActors[2]->GetProperty()->SetInterpolationToGouraud(); m_OdfsMappers.push_back(vtkPolyDataMapper::New()); m_OdfsMappers.push_back(vtkPolyDataMapper::New()); m_OdfsMappers.push_back(vtkPolyDataMapper::New()); vtkLookupTable *lut = vtkLookupTable::New(); m_OdfsMappers[0]->SetLookupTable(lut); m_OdfsMappers[1]->SetLookupTable(lut); m_OdfsMappers[2]->SetLookupTable(lut); m_OdfsActors[0]->SetMapper(m_OdfsMappers[0]); m_OdfsActors[1]->SetMapper(m_OdfsMappers[1]); m_OdfsActors[2]->SetMapper(m_OdfsMappers[2]); } template mitk::OdfVtkMapper2D ::OdfVtkMapper2D() { m_Planes.push_back(vtkPlane::New()); m_Planes.push_back(vtkPlane::New()); m_Planes.push_back(vtkPlane::New()); m_Cutters.push_back(vtkCutter::New()); m_Cutters.push_back(vtkCutter::New()); m_Cutters.push_back(vtkCutter::New()); m_Cutters[0]->SetCutFunction( m_Planes[0] ); m_Cutters[0]->GenerateValues( 1, 0, 1 ); m_Cutters[1]->SetCutFunction( m_Planes[1] ); m_Cutters[1]->GenerateValues( 1, 0, 1 ); m_Cutters[2]->SetCutFunction( m_Planes[2] ); m_Cutters[2]->GenerateValues( 1, 0, 1 ); // Windowing the cutted planes in direction 1 m_ThickPlanes1.push_back(vtkThickPlane::New()); m_ThickPlanes1.push_back(vtkThickPlane::New()); m_ThickPlanes1.push_back(vtkThickPlane::New()); m_Clippers1.push_back(vtkClipPolyData::New()); m_Clippers1.push_back(vtkClipPolyData::New()); m_Clippers1.push_back(vtkClipPolyData::New()); m_Clippers1[0]->SetClipFunction( m_ThickPlanes1[0] ); m_Clippers1[1]->SetClipFunction( m_ThickPlanes1[1] ); m_Clippers1[2]->SetClipFunction( m_ThickPlanes1[2] ); // Windowing the cutted planes in direction 2 m_ThickPlanes2.push_back(vtkThickPlane::New()); m_ThickPlanes2.push_back(vtkThickPlane::New()); m_ThickPlanes2.push_back(vtkThickPlane::New()); m_Clippers2.push_back(vtkClipPolyData::New()); m_Clippers2.push_back(vtkClipPolyData::New()); m_Clippers2.push_back(vtkClipPolyData::New()); m_Clippers2[0]->SetClipFunction( m_ThickPlanes2[0] ); m_Clippers2[1]->SetClipFunction( m_ThickPlanes2[1] ); m_Clippers2[2]->SetClipFunction( m_ThickPlanes2[2] ); m_ShowMaxNumber = 500; } template mitk::OdfVtkMapper2D ::~OdfVtkMapper2D() { } template mitk::Image* mitk::OdfVtkMapper2D ::GetInput() { return static_cast ( m_DataNode->GetData() ); } template vtkProp* mitk::OdfVtkMapper2D ::GetVtkProp(mitk::BaseRenderer* renderer) { LocalStorage *localStorage = m_LSH.GetLocalStorage(renderer); return localStorage->m_PropAssemblies[GetIndex(renderer)]; } template int mitk::OdfVtkMapper2D ::GetIndex(mitk::BaseRenderer* renderer) { if(!strcmp(renderer->GetName(),"stdmulti.widget1")) return 0; if(!strcmp(renderer->GetName(),"stdmulti.widget2")) return 1; if(!strcmp(renderer->GetName(),"stdmulti.widget3")) return 2; return 0; } template void mitk::OdfVtkMapper2D ::GlyphMethod(void *arg) { vtkMaskedProgrammableGlyphFilter* pfilter=(vtkMaskedProgrammableGlyphFilter*)arg; double point[3]; double debugpoint[3]; pfilter->GetPoint(point); pfilter->GetPoint(debugpoint); itk::Point p(point); Vector3D spacing = pfilter->GetGeometry()->GetSpacing(); p[0] /= spacing[0]; p[1] /= spacing[1]; p[2] /= spacing[2]; mitk::Point3D p2; pfilter->GetGeometry()->IndexToWorld( p, p2 ); point[0] = p2[0]; point[1] = p2[1]; point[2] = p2[2]; vtkPointData* data = pfilter->GetPointData(); vtkDataArray* odfvals = data->GetArray("vector"); vtkIdType id = pfilter->GetPointId(); m_OdfTransform->Identity(); m_OdfTransform->Translate(point[0],point[1],point[2]); typedef itk::OrientationDistributionFunction OdfType; OdfType odf; if(odfvals->GetNumberOfComponents()==6) { float tensorelems[6] = { (float)odfvals->GetComponent(id,0), (float)odfvals->GetComponent(id,1), (float)odfvals->GetComponent(id,2), (float)odfvals->GetComponent(id,3), (float)odfvals->GetComponent(id,4), (float)odfvals->GetComponent(id,5), }; itk::DiffusionTensor3D tensor(tensorelems); odf.InitFromTensor(tensor); } else { for(int i=0; iGetComponent(id,i); } switch(m_ScaleBy) { case ODFSB_NONE: m_OdfSource->SetScale(m_Scaling); break; case ODFSB_GFA: m_OdfSource->SetScale(m_Scaling*odf.GetGeneralizedGFA(m_IndexParam1, m_IndexParam2)); break; case ODFSB_PC: m_OdfSource->SetScale(m_Scaling*odf.GetPrincipleCurvature(m_IndexParam1, m_IndexParam2, 0)); break; } m_OdfSource->SetNormalization(m_Normalization); m_OdfSource->SetOdf(odf); m_OdfSource->Modified(); } template typename mitk::OdfVtkMapper2D::OdfDisplayGeometry mitk::OdfVtkMapper2D ::MeasureDisplayedGeometry(mitk::BaseRenderer* renderer) { PlaneGeometry::ConstPointer worldPlaneGeometry = renderer->GetCurrentWorldPlaneGeometry(); // set up the cutter orientation according to the current geometry of // the renderers plane double vp[ 3 ], vnormal[ 3 ]; Point3D point = worldPlaneGeometry->GetOrigin(); Vector3D normal = worldPlaneGeometry->GetNormal(); normal.Normalize(); vnl2vtk( point.GetVnlVector(), vp ); vnl2vtk( normal.GetVnlVector(), vnormal ); mitk::DisplayGeometry::Pointer dispGeometry = renderer->GetDisplayGeometry(); mitk::Vector2D size = dispGeometry->GetSizeInMM(); mitk::Vector2D origin = dispGeometry->GetOriginInMM(); // // |------O------| // | d2 | // L d1 M | // | | // |-------------| // mitk::Vector2D M; mitk::Vector2D L; mitk::Vector2D O; M[0] = origin[0] + size[0]/2; M[1] = origin[1] + size[1]/2; L[0] = origin[0]; L[1] = origin[1] + size[1]/2; O[0] = origin[0] + size[0]/2; O[1] = origin[1] + size[1]; mitk::Point2D point1; point1[0] = M[0]; point1[1] = M[1]; mitk::Point3D M3D; dispGeometry->Map(point1, M3D); point1[0] = L[0]; point1[1] = L[1]; mitk::Point3D L3D; dispGeometry->Map(point1, L3D); point1[0] = O[0]; point1[1] = O[1]; mitk::Point3D O3D; dispGeometry->Map(point1, O3D); double d1 = sqrt((M3D[0]-L3D[0])*(M3D[0]-L3D[0]) + (M3D[1]-L3D[1])*(M3D[1]-L3D[1]) + (M3D[2]-L3D[2])*(M3D[2]-L3D[2])); double d2 = sqrt((M3D[0]-O3D[0])*(M3D[0]-O3D[0]) + (M3D[1]-O3D[1])*(M3D[1]-O3D[1]) + (M3D[2]-O3D[2])*(M3D[2]-O3D[2])); double d = d1>d2 ? d1 : d2; d = d2; OdfDisplayGeometry retval; retval.vp[0] = vp[0]; retval.vp[1] = vp[1]; retval.vp[2] = vp[2]; retval.vnormal[0] = vnormal[0]; retval.vnormal[1] = vnormal[1]; retval.vnormal[2] = vnormal[2]; retval.normal[0] = normal[0]; retval.normal[1] = normal[1]; retval.normal[2] = normal[2]; retval.d = d; retval.d1 = d1; retval.d2 = d2; retval.M3D[0] = M3D[0]; retval.M3D[1] = M3D[1]; retval.M3D[2] = M3D[2]; retval.L3D[0] = L3D[0]; retval.L3D[1] = L3D[1]; retval.L3D[2] = L3D[2]; retval.O3D[0] = O3D[0]; retval.O3D[1] = O3D[1]; retval.O3D[2] = O3D[2]; retval.vp_original[0] = vp[0]; retval.vp_original[1] = vp[1]; retval.vp_original[2] = vp[2]; retval.vnormal_original[0] = vnormal[0]; retval.vnormal_original[1] = vnormal[1]; retval.vnormal_original[2] = vnormal[2]; retval.size[0] = size[0]; retval.size[1] = size[1]; retval.origin[0] = origin[0]; retval.origin[1] = origin[1]; return retval; } template void mitk::OdfVtkMapper2D ::Slice(mitk::BaseRenderer* renderer, OdfDisplayGeometry dispGeo) { LocalStorage *localStorage = m_LSH.GetLocalStorage(renderer); vtkLinearTransform * vtktransform = this->GetDataNode()->GetVtkTransform(this->GetTimestep()); int index = GetIndex(renderer); vtkSmartPointer inversetransform = vtkSmartPointer::New(); inversetransform->Identity(); inversetransform->Concatenate(vtktransform->GetLinearInverse()); double myscale[3]; ((vtkTransform*)vtktransform)->GetScale(myscale); inversetransform->PostMultiply(); inversetransform->Scale(1*myscale[0],1*myscale[1],1*myscale[2]); inversetransform->TransformPoint( dispGeo.vp, dispGeo.vp ); inversetransform->TransformNormalAtPoint( dispGeo.vp, dispGeo.vnormal, dispGeo.vnormal ); // vtk works in axis align coords // thus the normal also must be axis align, since // we do not allow arbitrary cutting through volume // // vnormal should already be axis align, but in order // to get rid of precision effects, we set the two smaller // components to zero here int dims[3]; m_VtkImage->GetDimensions(dims); double spac[3]; m_VtkImage->GetSpacing(spac); if(fabs(dispGeo.vnormal[0]) > fabs(dispGeo.vnormal[1]) && fabs(dispGeo.vnormal[0]) > fabs(dispGeo.vnormal[2]) ) { if(fabs(dispGeo.vp[0]/spac[0]) < 0.4) dispGeo.vp[0] = 0.4*spac[0]; if(fabs(dispGeo.vp[0]/spac[0]) > (dims[0]-1)-0.4) dispGeo.vp[0] = ((dims[0]-1)-0.4)*spac[0]; dispGeo.vnormal[1] = 0; dispGeo.vnormal[2] = 0; } if(fabs(dispGeo.vnormal[1]) > fabs(dispGeo.vnormal[0]) && fabs(dispGeo.vnormal[1]) > fabs(dispGeo.vnormal[2]) ) { if(fabs(dispGeo.vp[1]/spac[1]) < 0.4) dispGeo.vp[1] = 0.4*spac[1]; if(fabs(dispGeo.vp[1]/spac[1]) > (dims[1]-1)-0.4) dispGeo.vp[1] = ((dims[1]-1)-0.4)*spac[1]; dispGeo.vnormal[0] = 0; dispGeo.vnormal[2] = 0; } if(fabs(dispGeo.vnormal[2]) > fabs(dispGeo.vnormal[1]) && fabs(dispGeo.vnormal[2]) > fabs(dispGeo.vnormal[0]) ) { if(fabs(dispGeo.vp[2]/spac[2]) < 0.4) dispGeo.vp[2] = 0.4*spac[2]; if(fabs(dispGeo.vp[2]/spac[2]) > (dims[2]-1)-0.4) dispGeo.vp[2] = ((dims[2]-1)-0.4)*spac[2]; dispGeo.vnormal[0] = 0; dispGeo.vnormal[1] = 0; } m_Planes[index]->SetTransform( (vtkAbstractTransform*)NULL ); m_Planes[index]->SetOrigin( dispGeo.vp ); m_Planes[index]->SetNormal( dispGeo.vnormal ); vtkSmartPointer points; vtkSmartPointer tmppoints; vtkSmartPointer polydata; vtkSmartPointer pointdata; vtkSmartPointer delaunay; vtkSmartPointer cuttedPlane; // the cutter only works if we do not have a 2D-image // or if we have a 2D-image and want to see the whole image. // // for side views of 2D-images, we need some special treatment if(!( (dims[0] == 1 && dispGeo.vnormal[0] != 0) || (dims[1] == 1 && dispGeo.vnormal[1] != 0) || (dims[2] == 1 && dispGeo.vnormal[2] != 0) )) { m_Cutters[index]->SetCutFunction( m_Planes[index] ); m_Cutters[index]->SetInputData( m_VtkImage ); m_Cutters[index]->Update(); cuttedPlane = m_Cutters[index]->GetOutput(); } else { // cutting of a 2D-Volume does not work, // so we have to build up our own polydata object cuttedPlane = vtkPolyData::New(); points = vtkPoints::New(); points->SetNumberOfPoints(m_VtkImage->GetNumberOfPoints()); for(int i=0; iGetNumberOfPoints(); i++) { points->SetPoint(i, m_VtkImage->GetPoint(i)); } cuttedPlane->SetPoints(points); pointdata = vtkFloatArray::New(); int comps = m_VtkImage->GetPointData()->GetScalars()->GetNumberOfComponents(); pointdata->SetNumberOfComponents(comps); int tuples = m_VtkImage->GetPointData()->GetScalars()->GetNumberOfTuples(); pointdata->SetNumberOfTuples(tuples); for(int i=0; iSetTuple(i,m_VtkImage->GetPointData()->GetScalars()->GetTuple(i)); pointdata->SetName( "vector" ); cuttedPlane->GetPointData()->AddArray(pointdata); int nZero1, nZero2; if(dims[0]==1) { nZero1 = 1; nZero2 = 2; } else if(dims[1]==1) { nZero1 = 0; nZero2 = 2; } else { nZero1 = 0; nZero2 = 1; } tmppoints = vtkPoints::New(); for(int j=0; jGetNumberOfPoints(); j++){ double pt[3]; m_VtkImage->GetPoint(j,pt); tmppoints->InsertNextPoint(pt[nZero1],pt[nZero2],0); } polydata = vtkPolyData::New(); polydata->SetPoints( tmppoints ); delaunay = vtkDelaunay2D::New(); delaunay->SetInputData( polydata ); delaunay->Update(); vtkCellArray* polys = delaunay->GetOutput()->GetPolys(); cuttedPlane->SetPolys(polys); } if(cuttedPlane->GetNumberOfPoints()) { // WINDOWING HERE inversetransform = vtkTransform::New(); inversetransform->Identity(); inversetransform->Concatenate(vtktransform->GetLinearInverse()); double myscale[3]; ((vtkTransform*)vtktransform)->GetScale(myscale); inversetransform->PostMultiply(); inversetransform->Scale(1*myscale[0],1*myscale[1],1*myscale[2]); dispGeo.vnormal[0] = dispGeo.M3D[0]-dispGeo.O3D[0]; dispGeo.vnormal[1] = dispGeo.M3D[1]-dispGeo.O3D[1]; dispGeo.vnormal[2] = dispGeo.M3D[2]-dispGeo.O3D[2]; vtkMath::Normalize(dispGeo.vnormal); dispGeo.vp[0] = dispGeo.M3D[0]; dispGeo.vp[1] = dispGeo.M3D[1]; dispGeo.vp[2] = dispGeo.M3D[2]; inversetransform->TransformPoint( dispGeo.vp, dispGeo.vp ); inversetransform->TransformNormalAtPoint( dispGeo.vp, dispGeo.vnormal, dispGeo.vnormal ); m_ThickPlanes1[index]->count = 0; m_ThickPlanes1[index]->SetTransform((vtkAbstractTransform*)NULL ); m_ThickPlanes1[index]->SetPose( dispGeo.vnormal, dispGeo.vp ); m_ThickPlanes1[index]->SetThickness(dispGeo.d2); m_Clippers1[index]->SetClipFunction( m_ThickPlanes1[index] ); m_Clippers1[index]->SetInputData( cuttedPlane ); m_Clippers1[index]->SetInsideOut(1); m_Clippers1[index]->Update(); dispGeo.vnormal[0] = dispGeo.M3D[0]-dispGeo.L3D[0]; dispGeo.vnormal[1] = dispGeo.M3D[1]-dispGeo.L3D[1]; dispGeo.vnormal[2] = dispGeo.M3D[2]-dispGeo.L3D[2]; vtkMath::Normalize(dispGeo.vnormal); dispGeo.vp[0] = dispGeo.M3D[0]; dispGeo.vp[1] = dispGeo.M3D[1]; dispGeo.vp[2] = dispGeo.M3D[2]; inversetransform->TransformPoint( dispGeo.vp, dispGeo.vp ); inversetransform->TransformNormalAtPoint( dispGeo.vp, dispGeo.vnormal, dispGeo.vnormal ); m_ThickPlanes2[index]->count = 0; m_ThickPlanes2[index]->SetTransform((vtkAbstractTransform*)NULL ); m_ThickPlanes2[index]->SetPose( dispGeo.vnormal, dispGeo.vp ); m_ThickPlanes2[index]->SetThickness(dispGeo.d1); m_Clippers2[index]->SetClipFunction( m_ThickPlanes2[index] ); m_Clippers2[index]->SetInputData( m_Clippers1[index]->GetOutput() ); m_Clippers2[index]->SetInsideOut(1); m_Clippers2[index]->Update(); cuttedPlane = m_Clippers2[index]->GetOutput (); if(cuttedPlane->GetNumberOfPoints()) { localStorage->m_OdfsPlanes[index]->RemoveAllInputs(); vtkSmartPointer normals = vtkSmartPointer::New(); normals->SetInputConnection( m_OdfSource->GetOutputPort() ); normals->SplittingOff(); normals->ConsistencyOff(); normals->AutoOrientNormalsOff(); normals->ComputePointNormalsOn(); normals->ComputeCellNormalsOff(); normals->FlipNormalsOff(); normals->NonManifoldTraversalOff(); vtkSmartPointer trans = vtkSmartPointer::New(); trans->SetInputConnection( normals->GetOutputPort() ); trans->SetTransform(m_OdfTransform); vtkSmartPointer glyphGenerator = vtkSmartPointer::New(); glyphGenerator->SetMaximumNumberOfPoints(std::min(m_ShowMaxNumber,(int)cuttedPlane->GetNumberOfPoints())); glyphGenerator->SetRandomMode(0); glyphGenerator->SetUseMaskPoints(1); glyphGenerator->SetSourceConnection(trans->GetOutputPort() ); glyphGenerator->SetInput(cuttedPlane); glyphGenerator->SetColorModeToColorBySource(); glyphGenerator->SetInputArrayToProcess(0,0,0, vtkDataObject::FIELD_ASSOCIATION_POINTS , "vector"); glyphGenerator->SetGeometry(this->GetDataNode()->GetData()->GetGeometry()); glyphGenerator->SetGlyphMethod(&(GlyphMethod),(void *)glyphGenerator); try { glyphGenerator->Update(); } catch( itk::ExceptionObject& err ) { std::cout << err << std::endl; } localStorage->m_OdfsPlanes[index]->AddInputConnection(glyphGenerator->GetOutputPort()); localStorage->m_OdfsPlanes[index]->Update(); } } localStorage->m_PropAssemblies[index]->VisibilityOn(); if(localStorage->m_PropAssemblies[index]->GetParts()->IsItemPresent(localStorage->m_OdfsActors[index])) localStorage->m_PropAssemblies[index]->RemovePart(localStorage->m_OdfsActors[index]); localStorage->m_OdfsMappers[index]->SetInputData(localStorage->m_OdfsPlanes[index]->GetOutput()); localStorage->m_PropAssemblies[index]->AddPart(localStorage->m_OdfsActors[index]); } template bool mitk::OdfVtkMapper2D ::IsVisibleOdfs(mitk::BaseRenderer* renderer) { mitk::Image::Pointer input = const_cast(this->GetInput()); const TimeGeometry *inputTimeGeometry = input->GetTimeGeometry(); if(inputTimeGeometry==NULL || inputTimeGeometry->CountTimeSteps()==0 || !inputTimeGeometry->IsValidTimeStep(this->GetTimestep())) return false; if(this->IsPlaneRotated(renderer)) return false; bool retval = false; switch(GetIndex(renderer)) { case 0: GetDataNode()->GetVisibility(retval, renderer, "VisibleOdfs_T"); break; case 1: GetDataNode()->GetVisibility(retval, renderer, "VisibleOdfs_S"); break; case 2: GetDataNode()->GetVisibility(retval, renderer, "VisibleOdfs_C"); break; } return retval; } template void mitk::OdfVtkMapper2D ::MitkRenderOverlay(mitk::BaseRenderer* renderer) { if ( this->IsVisibleOdfs(renderer)==false ) return; if ( this->GetVtkProp(renderer)->GetVisibility() ) this->GetVtkProp(renderer)->RenderOverlay(renderer->GetVtkRenderer()); } template void mitk::OdfVtkMapper2D ::MitkRenderOpaqueGeometry(mitk::BaseRenderer* renderer) { if ( this->IsVisibleOdfs( renderer )==false ) return; if ( this->GetVtkProp(renderer)->GetVisibility() ) { // adapt cam pos this->GetVtkProp(renderer)->RenderOpaqueGeometry( renderer->GetVtkRenderer() ); } } template void mitk::OdfVtkMapper2D ::MitkRenderTranslucentGeometry(mitk::BaseRenderer* renderer) { if ( this->IsVisibleOdfs(renderer)==false ) return; if ( this->GetVtkProp(renderer)->GetVisibility() ) this->GetVtkProp(renderer)->RenderTranslucentPolygonalGeometry(renderer->GetVtkRenderer()); } template void mitk::OdfVtkMapper2D ::Update(mitk::BaseRenderer* renderer) { bool visible = true; GetDataNode()->GetVisibility(visible, renderer, "visible"); if ( !visible ) return; mitk::Image::Pointer input = const_cast( this->GetInput() ); if ( input.IsNull() ) return ; std::string classname("TensorImage"); if(classname.compare(input->GetNameOfClass())==0) m_VtkImage = dynamic_cast( this->GetInput() )->GetNonRgbVtkImageData(); std::string qclassname("QBallImage"); if(qclassname.compare(input->GetNameOfClass())==0) m_VtkImage = dynamic_cast( this->GetInput() )->GetNonRgbVtkImageData(); if( m_VtkImage ) { // make sure, that we have point data with more than 1 component (as vectors) vtkPointData* pointData = m_VtkImage->GetPointData(); if ( pointData == NULL ) { itkWarningMacro( << "m_VtkImage->GetPointData() returns NULL!" ); return ; } if ( pointData->GetNumberOfArrays() == 0 ) { itkWarningMacro( << "m_VtkImage->GetPointData()->GetNumberOfArrays() is 0!" ); return ; } else if ( pointData->GetArray(0)->GetNumberOfComponents() != N && pointData->GetArray(0)->GetNumberOfComponents() != 6 /*for tensor visualization*/) { itkWarningMacro( << "number of components != number of directions in ODF!" ); return; } else if ( pointData->GetArrayName( 0 ) == NULL ) { m_VtkImage->GetPointData()->GetArray(0)->SetName("vector"); } GenerateDataForRenderer(renderer); } else { itkWarningMacro( << "m_VtkImage is NULL!" ); return ; } } template void mitk::OdfVtkMapper2D ::GenerateDataForRenderer( mitk::BaseRenderer *renderer ) { LocalStorage *localStorage = m_LSH.GetLocalStorage(renderer); OdfDisplayGeometry dispGeo = MeasureDisplayedGeometry( renderer); if ( (localStorage->m_LastUpdateTime >= m_DataNode->GetMTime()) //was the node modified? && (localStorage->m_LastUpdateTime >= m_DataNode->GetPropertyList()->GetMTime()) //was a property modified? && (localStorage->m_LastUpdateTime >= m_DataNode->GetPropertyList(renderer)->GetMTime()) && dispGeo.Equals(m_LastDisplayGeometry)) return; localStorage->m_LastUpdateTime.Modified(); if(!IsVisibleOdfs(renderer)) { localStorage->m_OdfsActors[0]->VisibilityOff(); localStorage->m_OdfsActors[1]->VisibilityOff(); localStorage->m_OdfsActors[2]->VisibilityOff(); } else { localStorage->m_OdfsActors[0]->VisibilityOn(); localStorage->m_OdfsActors[1]->VisibilityOn(); localStorage->m_OdfsActors[2]->VisibilityOn(); m_OdfSource->SetAdditionalScale(GetMinImageSpacing(GetIndex(renderer))); ApplyPropertySettings(); Slice(renderer, dispGeo); m_LastDisplayGeometry = dispGeo; } } template double mitk::OdfVtkMapper2D::GetMinImageSpacing( int index ) { // Spacing adapted scaling double spacing[3]; m_VtkImage->GetSpacing(spacing); double min = spacing[0]; if(index==0) { min = spacing[0]; min = min > spacing[1] ? spacing[1] : min; } if(index==1) { min = spacing[1]; min = min > spacing[2] ? spacing[2] : min; } if(index==2) { min = spacing[0]; min = min > spacing[2] ? spacing[2] : min; } return min; } template void mitk::OdfVtkMapper2D ::ApplyPropertySettings() { this->GetDataNode()->GetFloatProperty( "Scaling", m_Scaling ); this->GetDataNode()->GetIntProperty( "ShowMaxNumber", m_ShowMaxNumber ); OdfNormalizationMethodProperty* nmp = dynamic_cast(this->GetDataNode()->GetProperty( "Normalization" )); if(nmp) m_Normalization = nmp->GetNormalization(); OdfScaleByProperty* sbp = dynamic_cast(this->GetDataNode()->GetProperty( "ScaleBy" )); if(sbp) m_ScaleBy = sbp->GetScaleBy(); this->GetDataNode()->GetFloatProperty( "IndexParam1", m_IndexParam1); this->GetDataNode()->GetFloatProperty( "IndexParam2", m_IndexParam2); } template bool mitk::OdfVtkMapper2D ::IsPlaneRotated(mitk::BaseRenderer* renderer) { - PlaneGeometry::ConstPointer worldPlaneGeometry = - renderer->GetCurrentWorldPlaneGeometry(); + PlaneGeometry::ConstPointer worldPlaneGeometry = renderer->GetCurrentWorldPlaneGeometry(); double vnormal[ 3 ]; Vector3D normal = worldPlaneGeometry->GetNormal(); normal.Normalize(); vnl2vtk( normal.GetVnlVector(), vnormal ); - vtkLinearTransform * vtktransform = - this->GetDataNode()->GetVtkTransform(this->GetTimestep()); - - vtkSmartPointer inversetransform = vtkSmartPointer::New(); - inversetransform->Identity(); - inversetransform->Concatenate(vtktransform->GetLinearInverse()); - double* n = inversetransform->TransformNormal(vnormal); - - int nonZeros = 0; - for (int j=0; j<3; j++) - { - if (fabs(n[j])>mitk::eps){ - nonZeros++; - } - } - if(nonZeros>1) + mitk::Image* currentImage = dynamic_cast( this->GetDataNode()->GetData() ); + if( currentImage == NULL ) + return false; + mitk::Vector3D imageNormal0 = currentImage->GetSlicedGeometry()->GetAxisVector(0); + mitk::Vector3D imageNormal1 = currentImage->GetSlicedGeometry()->GetAxisVector(1); + mitk::Vector3D imageNormal2 = currentImage->GetSlicedGeometry()->GetAxisVector(2); + imageNormal0.Normalize(); + imageNormal1.Normalize(); + imageNormal2.Normalize(); + + double eps = 0.000001; + int test = 0; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal0.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal1.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal2.GetVnlVector()))-1) > eps ) + test++; + if (test==3) return true; - return false; } template void mitk::OdfVtkMapper2D ::SetDefaultProperties(mitk::DataNode* node, mitk::BaseRenderer* /*renderer*/, bool /*overwrite*/) { node->SetProperty( "ShowMaxNumber", mitk::IntProperty::New( 150 ) ); node->SetProperty( "Scaling", mitk::FloatProperty::New( 1.0 ) ); node->SetProperty( "Normalization", mitk::OdfNormalizationMethodProperty::New()); node->SetProperty( "ScaleBy", mitk::OdfScaleByProperty::New()); node->SetProperty( "IndexParam1", mitk::FloatProperty::New(2)); node->SetProperty( "IndexParam2", mitk::FloatProperty::New(1)); node->SetProperty( "visible", mitk::BoolProperty::New( true ) ); node->SetProperty( "VisibleOdfs_T", mitk::BoolProperty::New( false ) ); node->SetProperty( "VisibleOdfs_C", mitk::BoolProperty::New( false ) ); node->SetProperty( "VisibleOdfs_S", mitk::BoolProperty::New( false ) ); node->SetProperty ("layer", mitk::IntProperty::New(100)); node->SetProperty( "DoRefresh", mitk::BoolProperty::New( true ) ); } #endif // __mitkOdfVtkMapper2D_txx__ diff --git a/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.cpp b/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.cpp index cc6b0cb384..5519f43796 100644 --- a/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.cpp +++ b/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.cpp @@ -1,1869 +1,1022 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "QmitkControlVisualizationPropertiesView.h" #include "mitkNodePredicateDataType.h" #include "mitkDataNodeObject.h" #include "mitkOdfNormalizationMethodProperty.h" #include "mitkOdfScaleByProperty.h" #include "mitkResliceMethodProperty.h" #include "mitkRenderingManager.h" #include "mitkTbssImage.h" #include "mitkPlanarFigure.h" #include "mitkFiberBundleX.h" #include "QmitkDataStorageComboBox.h" #include "QmitkStdMultiWidget.h" #include "mitkFiberBundleInteractor.h" #include "mitkPlanarFigureInteractor.h" #include #include #include #include #include #include "mitkGlobalInteraction.h" #include "usModuleRegistry.h" #include "mitkPlaneGeometry.h" #include "berryIWorkbenchWindow.h" #include "berryIWorkbenchPage.h" #include "berryISelectionService.h" #include "berryConstants.h" #include "berryPlatformUI.h" #include "itkRGBAPixel.h" #include #include "qwidgetaction.h" #include "qcolordialog.h" #include #include #define ROUND(a) ((a)>0 ? (int)((a)+0.5) : -(int)(0.5-(a))) -static bool DetermineAffectedImageSlice( const mitk::Image* image, const mitk::PlaneGeometry* plane, int& affectedDimension, int& affectedSlice ) -{ - assert(image); - assert(plane); - - // compare normal of plane to the three axis vectors of the image - mitk::Vector3D normal = plane->GetNormal(); - mitk::Vector3D imageNormal0 = image->GetSlicedGeometry()->GetAxisVector(0); - mitk::Vector3D imageNormal1 = image->GetSlicedGeometry()->GetAxisVector(1); - mitk::Vector3D imageNormal2 = image->GetSlicedGeometry()->GetAxisVector(2); - - normal.Normalize(); - imageNormal0.Normalize(); - imageNormal1.Normalize(); - imageNormal2.Normalize(); - - imageNormal0.SetVnlVector( vnl_cross_3d(normal.GetVnlVector(),imageNormal0.GetVnlVector()) ); - imageNormal1.SetVnlVector( vnl_cross_3d(normal.GetVnlVector(),imageNormal1.GetVnlVector()) ); - imageNormal2.SetVnlVector( vnl_cross_3d(normal.GetVnlVector(),imageNormal2.GetVnlVector()) ); - - double eps( 0.00001 ); - // axial - if ( imageNormal2.GetNorm() <= eps ) - { - affectedDimension = 2; - } - // sagittal - else if ( imageNormal1.GetNorm() <= eps ) - { - affectedDimension = 1; - } - // frontal - else if ( imageNormal0.GetNorm() <= eps ) - { - affectedDimension = 0; - } - else - { - affectedDimension = -1; // no idea - return false; - } - - // determine slice number in image - mitk::BaseGeometry* imageGeometry = image->GetGeometry(0); - mitk::Point3D testPoint = imageGeometry->GetCenter(); - mitk::Point3D projectedPoint; - plane->Project( testPoint, projectedPoint ); - - mitk::Point3D indexPoint; - - imageGeometry->WorldToIndex( projectedPoint, indexPoint ); - affectedSlice = ROUND( indexPoint[affectedDimension] ); - MITK_DEBUG << "indexPoint " << indexPoint << " affectedDimension " << affectedDimension << " affectedSlice " << affectedSlice; - - // check if this index is still within the image - if ( affectedSlice < 0 || affectedSlice >= static_cast(image->GetDimension(affectedDimension)) ) return false; - - return true; -} - const std::string QmitkControlVisualizationPropertiesView::VIEW_ID = "org.mitk.views.controlvisualizationpropertiesview"; using namespace berry; -struct CvpSelListener : ISelectionListener -{ - - berryObjectMacro(CvpSelListener); - - CvpSelListener(QmitkControlVisualizationPropertiesView* view) - { - m_View = view; - } - - void ApplySettings(mitk::DataNode::Pointer node) - { - bool tex_int; - node->GetBoolProperty("texture interpolation", tex_int); - if(tex_int) - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexON); - m_View->m_Controls->m_TextureIntON->setChecked(true); - m_View->m_TexIsOn = true; - } - else - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexOFF); - m_View->m_Controls->m_TextureIntON->setChecked(false); - m_View->m_TexIsOn = false; - } - - int val; - node->GetIntProperty("ShowMaxNumber", val); - m_View->m_Controls->m_ShowMaxNumber->setValue(val); - - m_View->m_Controls->m_NormalizationDropdown->setCurrentIndex(dynamic_cast(node->GetProperty("Normalization"))->GetValueAsId()); - - float fval; - node->GetFloatProperty("Scaling",fval); - m_View->m_Controls->m_ScalingFactor->setValue(fval); - - m_View->m_Controls->m_AdditionalScaling->setCurrentIndex(dynamic_cast(node->GetProperty("ScaleBy"))->GetValueAsId()); - - node->GetFloatProperty("IndexParam1",fval); - m_View->m_Controls->m_IndexParam1->setValue(fval); - - node->GetFloatProperty("IndexParam2",fval); - m_View->m_Controls->m_IndexParam2->setValue(fval); - } - - void DoSelectionChanged(ISelection::ConstPointer selection) - { - // save current selection in member variable - m_View->m_CurrentSelection = selection.Cast(); - - m_View->m_Controls->m_VisibleOdfsON_T->setVisible(false); - m_View->m_Controls->m_VisibleOdfsON_S->setVisible(false); - m_View->m_Controls->m_VisibleOdfsON_C->setVisible(false); - m_View->m_Controls->m_TextureIntON->setVisible(false); - - m_View->m_Controls->m_ImageControlsFrame->setVisible(false); - m_View->m_Controls->m_PlanarFigureControlsFrame->setVisible(false); - m_View->m_Controls->m_BundleControlsFrame->setVisible(false); - m_View->m_SelectedNode = 0; - - if(m_View->m_CurrentSelection.IsNull()) - return; - - if(m_View->m_CurrentSelection->Size() == 1) - { - mitk::DataNodeObject::Pointer nodeObj = m_View->m_CurrentSelection->Begin()->Cast(); - if(nodeObj.IsNotNull()) - { - mitk::DataNode::Pointer node = nodeObj->GetDataNode(); - - // check if node has data, - // if some helper nodes are shown in the DataManager, the GetData() returns 0x0 which would lead to SIGSEV - mitk::BaseData* nodeData = node->GetData(); - - if(nodeData != NULL ) - { - if(dynamic_cast(nodeData) != 0) - { - m_View->m_Controls->m_PlanarFigureControlsFrame->setVisible(true); - m_View->m_SelectedNode = node; - - float val; - node->GetFloatProperty("planarfigure.line.width", val); - m_View->m_Controls->m_PFWidth->setValue((int)(val*10.0)); - - QString label = "Width %1"; - label = label.arg(val); - m_View->m_Controls->label_pfwidth->setText(label); - - float color[3]; - node->GetColor( color, NULL, "planarfigure.default.line.color"); - QString styleSheet = "background-color:rgb("; - styleSheet.append(QString::number(color[0]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[1]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[2]*255.0)); - styleSheet.append(")"); - m_View->m_Controls->m_PFColor->setAutoFillBackground(true); - m_View->m_Controls->m_PFColor->setStyleSheet(styleSheet); - - node->GetColor( color, NULL, "color"); - styleSheet = "background-color:rgb("; - styleSheet.append(QString::number(color[0]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[1]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[2]*255.0)); - styleSheet.append(")"); - - m_View->PlanarFigureFocus(); - } - - if(dynamic_cast(nodeData) != 0) - { - m_View->m_Controls->m_BundleControlsFrame->setVisible(true); - m_View->m_SelectedNode = node; - - if(m_View->m_CurrentPickingNode != 0 && node.GetPointer() != m_View->m_CurrentPickingNode) - { - m_View->m_Controls->m_Crosshair->setEnabled(false); - } - else - { - m_View->m_Controls->m_Crosshair->setEnabled(true); - } - - int width; - node->GetIntProperty("LineWidth", width); - m_View->m_Controls->m_LineWidth->setValue(width); - - float range; - node->GetFloatProperty("Fiber2DSliceThickness",range); - mitk::FiberBundleX::Pointer fib = dynamic_cast(node->GetData()); - mitk::BaseGeometry::Pointer geo = fib->GetGeometry(); - mitk::ScalarType max = geo->GetExtentInMM(0); - max = std::max(max, geo->GetExtentInMM(1)); - max = std::max(max, geo->GetExtentInMM(2)); - - m_View->m_Controls->m_FiberThicknessSlider->setMaximum(max * 10); - - m_View->m_Controls->m_FiberThicknessSlider->setValue(range * 10); - } - - } // check node data != NULL - } - } - - if(m_View->m_CurrentSelection->Size() > 0 && m_View->m_SelectedNode == 0) - { - m_View->m_Controls->m_ImageControlsFrame->setVisible(true); - - bool foundDiffusionImage = false; - bool foundQBIVolume = false; - bool foundTensorVolume = false; - bool foundImage = false; - bool foundMultipleOdfImages = false; - bool foundRGBAImage = false; - bool foundTbssImage = false; - - // do something with the selected items - if(m_View->m_CurrentSelection) - { - // iterate selection - for (IStructuredSelection::iterator i = m_View->m_CurrentSelection->Begin(); - i != m_View->m_CurrentSelection->End(); ++i) - { - - // extract datatree node - if (mitk::DataNodeObject::Pointer nodeObj = i->Cast()) - { - mitk::DataNode::Pointer node = nodeObj->GetDataNode(); - - mitk::BaseData* nodeData = node->GetData(); - - if(nodeData != NULL ) - { - // only look at interesting types - if(QString("DiffusionImage").compare(nodeData->GetNameOfClass())==0) - { - foundDiffusionImage = true; - bool tex_int; - node->GetBoolProperty("texture interpolation", tex_int); - if(tex_int) - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexON); - m_View->m_Controls->m_TextureIntON->setChecked(true); - m_View->m_TexIsOn = true; - } - else - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexOFF); - m_View->m_Controls->m_TextureIntON->setChecked(false); - m_View->m_TexIsOn = false; - } - int val; - node->GetIntProperty("DisplayChannel", val); - m_View->m_Controls->m_DisplayIndex->setValue(val); - m_View->m_Controls->m_DisplayIndexSpinBox->setValue(val); - - QString label = "Channel %1"; - label = label.arg(val); - m_View->m_Controls->label_channel->setText(label); - - mitk::DiffusionPropertyHelper::ImageType::Pointer itkVectorImagePointer = mitk::DiffusionPropertyHelper::ImageType::New(); - mitk::CastToItkImage(dynamic_cast(nodeData), itkVectorImagePointer); - - int maxVal = itkVectorImagePointer->GetVectorLength(); - m_View->m_Controls->m_DisplayIndex->setMaximum(maxVal-1); - m_View->m_Controls->m_DisplayIndexSpinBox->setMaximum(maxVal-1); - } - - if(QString("TbssImage").compare(nodeData->GetNameOfClass())==0) - { - foundTbssImage = true; - bool tex_int; - node->GetBoolProperty("texture interpolation", tex_int); - if(tex_int) - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexON); - m_View->m_Controls->m_TextureIntON->setChecked(true); - m_View->m_TexIsOn = true; - } - else - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexOFF); - m_View->m_Controls->m_TextureIntON->setChecked(false); - m_View->m_TexIsOn = false; - } - int val; - node->GetIntProperty("DisplayChannel", val); - m_View->m_Controls->m_DisplayIndex->setValue(val); - m_View->m_Controls->m_DisplayIndexSpinBox->setValue(val); - - QString label = "Channel %1"; - label = label.arg(val); - m_View->m_Controls->label_channel->setText(label); - - int maxVal = (dynamic_cast(nodeData))->GetImage()->GetVectorLength(); - m_View->m_Controls->m_DisplayIndex->setMaximum(maxVal-1); - m_View->m_Controls->m_DisplayIndexSpinBox->setMaximum(maxVal-1); - } - - - else if(QString("QBallImage").compare(nodeData->GetNameOfClass())==0) - { - foundMultipleOdfImages = foundQBIVolume || foundTensorVolume; - foundQBIVolume = true; - ApplySettings(node); - } - - else if(QString("TensorImage").compare(nodeData->GetNameOfClass())==0) - { - foundMultipleOdfImages = foundQBIVolume || foundTensorVolume; - foundTensorVolume = true; - ApplySettings(node); - } - - else if(QString("Image").compare(nodeData->GetNameOfClass())==0) - { - foundImage = true; - mitk::Image::Pointer img = dynamic_cast(nodeData); - if(img.IsNotNull() - && img->GetPixelType().GetPixelType() == itk::ImageIOBase::RGBA - && img->GetPixelType().GetComponentType() == itk::ImageIOBase::UCHAR ) - { - foundRGBAImage = true; - } - - bool tex_int; - node->GetBoolProperty("texture interpolation", tex_int); - if(tex_int) - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexON); - m_View->m_Controls->m_TextureIntON->setChecked(true); - m_View->m_TexIsOn = true; - } - else - { - m_View->m_Controls->m_TextureIntON->setIcon(*m_View->m_IconTexOFF); - m_View->m_Controls->m_TextureIntON->setChecked(false); - m_View->m_TexIsOn = false; - } - } - - } // END CHECK node != NULL - } - } - } - - m_View->m_FoundSingleOdfImage = (foundQBIVolume || foundTensorVolume) - && !foundMultipleOdfImages; - m_View->m_Controls->m_NumberGlyphsFrame->setVisible(m_View->m_FoundSingleOdfImage); - - m_View->m_Controls->m_NormalizationDropdown->setVisible(m_View->m_FoundSingleOdfImage); - m_View->m_Controls->label->setVisible(m_View->m_FoundSingleOdfImage); - m_View->m_Controls->m_ScalingFactor->setVisible(m_View->m_FoundSingleOdfImage); - m_View->m_Controls->m_AdditionalScaling->setVisible(m_View->m_FoundSingleOdfImage); - m_View->m_Controls->m_NormalizationScalingFrame->setVisible(m_View->m_FoundSingleOdfImage); - - m_View->m_Controls->OpacMinFrame->setVisible(foundRGBAImage || m_View->m_FoundSingleOdfImage); - - // changed for SPIE paper, Principle curvature scaling - //m_View->m_Controls->params_frame->setVisible(m_View->m_FoundSingleOdfImage); - m_View->m_Controls->params_frame->setVisible(false); - - m_View->m_Controls->m_VisibleOdfsON_T->setVisible(m_View->m_FoundSingleOdfImage); - m_View->m_Controls->m_VisibleOdfsON_S->setVisible(m_View->m_FoundSingleOdfImage); - m_View->m_Controls->m_VisibleOdfsON_C->setVisible(m_View->m_FoundSingleOdfImage); - - bool foundAnyImage = foundDiffusionImage || - foundQBIVolume || foundTensorVolume || foundImage || foundTbssImage; - - m_View->m_Controls->m_Reinit->setVisible(foundAnyImage); - m_View->m_Controls->m_TextureIntON->setVisible(foundAnyImage); - m_View->m_Controls->m_TSMenu->setVisible(foundAnyImage); - - } - } - - void SelectionChanged(IWorkbenchPart::Pointer part, ISelection::ConstPointer selection) - { - // check, if selection comes from datamanager - if (part) - { - QString partname(part->GetPartName().c_str()); - if(partname.compare("Data Manager")==0) - { - - // apply selection - DoSelectionChanged(selection); - - } - } - } - - QmitkControlVisualizationPropertiesView* m_View; -}; - QmitkControlVisualizationPropertiesView::QmitkControlVisualizationPropertiesView() : QmitkFunctionality(), m_Controls(NULL), m_MultiWidget(NULL), m_NodeUsedForOdfVisualization(NULL), m_IconTexOFF(new QIcon(":/QmitkDiffusionImaging/texIntOFFIcon.png")), m_IconTexON(new QIcon(":/QmitkDiffusionImaging/texIntONIcon.png")), m_IconGlyOFF_T(new QIcon(":/QmitkDiffusionImaging/glyphsoff_T.png")), m_IconGlyON_T(new QIcon(":/QmitkDiffusionImaging/glyphson_T.png")), m_IconGlyOFF_C(new QIcon(":/QmitkDiffusionImaging/glyphsoff_C.png")), m_IconGlyON_C(new QIcon(":/QmitkDiffusionImaging/glyphson_C.png")), m_IconGlyOFF_S(new QIcon(":/QmitkDiffusionImaging/glyphsoff_S.png")), m_IconGlyON_S(new QIcon(":/QmitkDiffusionImaging/glyphson_S.png")), m_CurrentSelection(0), m_CurrentPickingNode(0), m_GlyIsOn_S(false), m_GlyIsOn_C(false), m_GlyIsOn_T(false), m_FiberBundleObserverTag(0), m_FiberBundleObserveOpacityTag(0), m_Color(NULL) { currentThickSlicesMode = 1; m_MyMenu = NULL; int numThread = itk::MultiThreader::GetGlobalMaximumNumberOfThreads(); if (numThread > 12) numThread = 12; itk::MultiThreader::SetGlobalDefaultNumberOfThreads(numThread); } QmitkControlVisualizationPropertiesView::QmitkControlVisualizationPropertiesView(const QmitkControlVisualizationPropertiesView& other) { Q_UNUSED(other) throw std::runtime_error("Copy constructor not implemented"); } QmitkControlVisualizationPropertiesView::~QmitkControlVisualizationPropertiesView() { if(m_SlicesRotationObserverTag1 ) { mitk::SlicesCoordinator::Pointer coordinator = m_MultiWidget->GetSlicesRotator(); if( coordinator.IsNotNull() ) coordinator->RemoveObserver(m_SlicesRotationObserverTag1); } if( m_SlicesRotationObserverTag2) { mitk::SlicesCoordinator::Pointer coordinator = m_MultiWidget->GetSlicesRotator(); if( coordinator.IsNotNull() ) coordinator->RemoveObserver(m_SlicesRotationObserverTag1); } this->GetSite()->GetWorkbenchWindow()->GetSelectionService()->RemovePostSelectionListener(/*"org.mitk.views.datamanager",*/ m_SelListener); } void QmitkControlVisualizationPropertiesView::OnThickSlicesModeSelected( QAction* action ) { currentThickSlicesMode = action->data().toInt(); switch(currentThickSlicesMode) { default: case 1: this->m_Controls->m_TSMenu->setText("MIP"); break; case 2: this->m_Controls->m_TSMenu->setText("SUM"); break; case 3: this->m_Controls->m_TSMenu->setText("WEIGH"); break; } mitk::DataNode* n; n = this->m_MultiWidget->GetWidgetPlane1(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( currentThickSlicesMode ) ); n = this->m_MultiWidget->GetWidgetPlane2(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( currentThickSlicesMode ) ); n = this->m_MultiWidget->GetWidgetPlane3(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( currentThickSlicesMode ) ); mitk::BaseRenderer::Pointer renderer = this->GetActiveStdMultiWidget()->GetRenderWindow1()->GetRenderer(); if(renderer.IsNotNull()) { renderer->SendUpdateSlice(); } renderer = this->GetActiveStdMultiWidget()->GetRenderWindow2()->GetRenderer(); if(renderer.IsNotNull()) { renderer->SendUpdateSlice(); } renderer = this->GetActiveStdMultiWidget()->GetRenderWindow3()->GetRenderer(); if(renderer.IsNotNull()) { renderer->SendUpdateSlice(); } renderer->GetRenderingManager()->RequestUpdateAll(); } void QmitkControlVisualizationPropertiesView::OnTSNumChanged(int num) { if(num==0) { mitk::DataNode* n; n = this->m_MultiWidget->GetWidgetPlane1(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( 0 ) ); if(n) n->SetProperty( "reslice.thickslices.num", mitk::IntProperty::New( num ) ); if(n) n->SetProperty( "reslice.thickslices.showarea", mitk::BoolProperty::New( false ) ); n = this->m_MultiWidget->GetWidgetPlane2(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( 0 ) ); if(n) n->SetProperty( "reslice.thickslices.num", mitk::IntProperty::New( num ) ); if(n) n->SetProperty( "reslice.thickslices.showarea", mitk::BoolProperty::New( false ) ); n = this->m_MultiWidget->GetWidgetPlane3(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( 0 ) ); if(n) n->SetProperty( "reslice.thickslices.num", mitk::IntProperty::New( num ) ); if(n) n->SetProperty( "reslice.thickslices.showarea", mitk::BoolProperty::New( false ) ); } else { mitk::DataNode* n; n = this->m_MultiWidget->GetWidgetPlane1(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( currentThickSlicesMode ) ); if(n) n->SetProperty( "reslice.thickslices.num", mitk::IntProperty::New( num ) ); if(n) n->SetProperty( "reslice.thickslices.showarea", mitk::BoolProperty::New( (num>0) ) ); n = this->m_MultiWidget->GetWidgetPlane2(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( currentThickSlicesMode ) ); if(n) n->SetProperty( "reslice.thickslices.num", mitk::IntProperty::New( num ) ); if(n) n->SetProperty( "reslice.thickslices.showarea", mitk::BoolProperty::New( (num>0) ) ); n = this->m_MultiWidget->GetWidgetPlane3(); if(n) n->SetProperty( "reslice.thickslices", mitk::ResliceMethodProperty::New( currentThickSlicesMode ) ); if(n) n->SetProperty( "reslice.thickslices.num", mitk::IntProperty::New( num ) ); if(n) n->SetProperty( "reslice.thickslices.showarea", mitk::BoolProperty::New( (num>0) ) ); } m_TSLabel->setText(QString::number(num*2+1)); mitk::BaseRenderer::Pointer renderer = this->GetActiveStdMultiWidget()->GetRenderWindow1()->GetRenderer(); if(renderer.IsNotNull()) renderer->SendUpdateSlice(); renderer = this->GetActiveStdMultiWidget()->GetRenderWindow2()->GetRenderer(); if(renderer.IsNotNull()) renderer->SendUpdateSlice(); renderer = this->GetActiveStdMultiWidget()->GetRenderWindow3()->GetRenderer(); if(renderer.IsNotNull()) renderer->SendUpdateSlice(); renderer->GetRenderingManager()->RequestUpdateAll(mitk::RenderingManager::REQUEST_UPDATE_2DWINDOWS); } void QmitkControlVisualizationPropertiesView::CreateQtPartControl(QWidget *parent) { if (!m_Controls) { // create GUI widgets m_Controls = new Ui::QmitkControlVisualizationPropertiesViewControls; m_Controls->setupUi(parent); this->CreateConnections(); // hide warning (ODFs in rotated planes) m_Controls->m_lblRotatedPlanesWarning->hide(); m_MyMenu = new QMenu(parent); - - // button for changing rotation mode m_Controls->m_TSMenu->setMenu( m_MyMenu ); - //m_CrosshairModeButton->setIcon( QIcon( iconCrosshairMode_xpm ) ); - - m_Controls->params_frame->setVisible(false); - - QIcon icon5(":/QmitkDiffusionImaging/Refresh_48.png"); - m_Controls->m_Reinit->setIcon(icon5); - m_Controls->m_Focus->setIcon(icon5); - - QIcon iconColor(":/QmitkDiffusionImaging/color24.gif"); - m_Controls->m_PFColor->setIcon(iconColor); - m_Controls->m_Color->setIcon(iconColor); - - QIcon iconReset(":/QmitkDiffusionImaging/reset.png"); - m_Controls->m_ResetColoring->setIcon(iconReset); - - m_Controls->m_PFColor->setToolButtonStyle(Qt::ToolButtonTextBesideIcon); - - QIcon iconCrosshair(":/QmitkDiffusionImaging/crosshair.png"); - m_Controls->m_Crosshair->setIcon(iconCrosshair); - // was is los - QIcon iconPaint(":/QmitkDiffusionImaging/paint2.png"); - m_Controls->m_TDI->setIcon(iconPaint); QIcon iconFiberFade(":/QmitkDiffusionImaging/MapperEfx2D.png"); m_Controls->m_FiberFading2D->setIcon(iconFiberFade); - m_Controls->m_TextureIntON->setCheckable(true); - #ifndef DIFFUSION_IMAGING_EXTENDED int size = m_Controls->m_AdditionalScaling->count(); for(int t=0; tm_AdditionalScaling->itemText(t).toStdString() == "Scale by ASR") { m_Controls->m_AdditionalScaling->removeItem(t); } } #endif - m_Controls->m_OpacitySlider->setRange(0.0,1.0); - m_Controls->m_OpacitySlider->setMinimumValue(0.0); - m_Controls->m_OpacitySlider->setMaximumValue(0.0); - m_Controls->m_ScalingFrame->setVisible(false); m_Controls->m_NormalizationFrame->setVisible(false); } - - m_IsInitialized = false; - m_SelListener = berry::ISelectionListener::Pointer(new CvpSelListener(this)); - this->GetSite()->GetWorkbenchWindow()->GetSelectionService()->AddPostSelectionListener(/*"org.mitk.views.datamanager",*/ m_SelListener); - berry::ISelection::ConstPointer sel( - this->GetSite()->GetWorkbenchWindow()->GetSelectionService()->GetSelection("org.mitk.views.datamanager")); - m_CurrentSelection = sel.Cast(); - m_SelListener.Cast()->DoSelectionChanged(sel); - m_IsInitialized = true; } void QmitkControlVisualizationPropertiesView::StdMultiWidgetAvailable (QmitkStdMultiWidget &stdMultiWidget) { m_MultiWidget = &stdMultiWidget; if (m_MultiWidget) { mitk::SlicesCoordinator* coordinator = m_MultiWidget->GetSlicesRotator(); if (coordinator) { itk::ReceptorMemberCommand::Pointer command2 = itk::ReceptorMemberCommand::New(); command2->SetCallbackFunction( this, &QmitkControlVisualizationPropertiesView::SliceRotation ); m_SlicesRotationObserverTag1 = coordinator->AddObserver( mitk::SliceRotationEvent(), command2 ); } coordinator = m_MultiWidget->GetSlicesSwiveller(); if (coordinator) { itk::ReceptorMemberCommand::Pointer command2 = itk::ReceptorMemberCommand::New(); command2->SetCallbackFunction( this, &QmitkControlVisualizationPropertiesView::SliceRotation ); m_SlicesRotationObserverTag2 = coordinator->AddObserver( mitk::SliceRotationEvent(), command2 ); } } } void QmitkControlVisualizationPropertiesView::SliceRotation(const itk::EventObject&) { // test if plane rotated if( m_GlyIsOn_T || m_GlyIsOn_C || m_GlyIsOn_S ) { if( this->IsPlaneRotated() ) { // show label m_Controls->m_lblRotatedPlanesWarning->show(); } else { //hide label m_Controls->m_lblRotatedPlanesWarning->hide(); } } } - void QmitkControlVisualizationPropertiesView::StdMultiWidgetNotAvailable() { m_MultiWidget = NULL; } void QmitkControlVisualizationPropertiesView::NodeRemoved(const mitk::DataNode* node) { } #include void QmitkControlVisualizationPropertiesView::CreateConnections() { if ( m_Controls ) { - connect( (QObject*)(m_Controls->m_DisplayIndex), SIGNAL(valueChanged(int)), this, SLOT(DisplayIndexChanged(int)) ); - connect( (QObject*)(m_Controls->m_DisplayIndexSpinBox), SIGNAL(valueChanged(int)), this, SLOT(DisplayIndexChanged(int)) ); - connect( (QObject*)(m_Controls->m_TextureIntON), SIGNAL(clicked()), this, SLOT(TextIntON()) ); - connect( (QObject*)(m_Controls->m_Reinit), SIGNAL(clicked()), this, SLOT(Reinit()) ); connect( (QObject*)(m_Controls->m_VisibleOdfsON_T), SIGNAL(clicked()), this, SLOT(VisibleOdfsON_T()) ); connect( (QObject*)(m_Controls->m_VisibleOdfsON_S), SIGNAL(clicked()), this, SLOT(VisibleOdfsON_S()) ); connect( (QObject*)(m_Controls->m_VisibleOdfsON_C), SIGNAL(clicked()), this, SLOT(VisibleOdfsON_C()) ); connect( (QObject*)(m_Controls->m_ShowMaxNumber), SIGNAL(editingFinished()), this, SLOT(ShowMaxNumberChanged()) ); connect( (QObject*)(m_Controls->m_NormalizationDropdown), SIGNAL(currentIndexChanged(int)), this, SLOT(NormalizationDropdownChanged(int)) ); connect( (QObject*)(m_Controls->m_ScalingFactor), SIGNAL(valueChanged(double)), this, SLOT(ScalingFactorChanged(double)) ); connect( (QObject*)(m_Controls->m_AdditionalScaling), SIGNAL(currentIndexChanged(int)), this, SLOT(AdditionalScaling(int)) ); - connect( (QObject*)(m_Controls->m_IndexParam1), SIGNAL(valueChanged(double)), this, SLOT(IndexParam1Changed(double)) ); - connect( (QObject*)(m_Controls->m_IndexParam2), SIGNAL(valueChanged(double)), this, SLOT(IndexParam2Changed(double)) ); connect( (QObject*)(m_Controls->m_ScalingCheckbox), SIGNAL(clicked()), this, SLOT(ScalingCheckbox()) ); - connect( (QObject*)(m_Controls->m_OpacitySlider), SIGNAL(spanChanged(double,double)), this, SLOT(OpacityChanged(double,double)) ); - connect((QObject*) m_Controls->m_Color, SIGNAL(clicked()), (QObject*) this, SLOT(BundleRepresentationColor())); connect((QObject*) m_Controls->m_ResetColoring, SIGNAL(clicked()), (QObject*) this, SLOT(BundleRepresentationResetColoring())); - connect((QObject*) m_Controls->m_Focus, SIGNAL(clicked()), (QObject*) this, SLOT(PlanarFigureFocus())); connect((QObject*) m_Controls->m_FiberFading2D, SIGNAL(clicked()), (QObject*) this, SLOT( Fiber2DfadingEFX() ) ); connect((QObject*) m_Controls->m_FiberThicknessSlider, SIGNAL(sliderReleased()), (QObject*) this, SLOT( FiberSlicingThickness2D() ) ); connect((QObject*) m_Controls->m_FiberThicknessSlider, SIGNAL(valueChanged(int)), (QObject*) this, SLOT( FiberSlicingUpdateLabel(int) )); connect((QObject*) m_Controls->m_Crosshair, SIGNAL(clicked()), (QObject*) this, SLOT(SetInteractor())); - connect((QObject*) m_Controls->m_PFWidth, SIGNAL(valueChanged(int)), (QObject*) this, SLOT(PFWidth(int))); - connect((QObject*) m_Controls->m_PFColor, SIGNAL(clicked()), (QObject*) this, SLOT(PFColor())); - connect((QObject*) m_Controls->m_TDI, SIGNAL(clicked()), (QObject*) this, SLOT(GenerateTdi())); connect((QObject*) m_Controls->m_LineWidth, SIGNAL(editingFinished()), (QObject*) this, SLOT(LineWidthChanged())); } } void QmitkControlVisualizationPropertiesView::Activated() { - berry::ISelection::ConstPointer sel( - this->GetSite()->GetWorkbenchWindow()->GetSelectionService()->GetSelection("org.mitk.views.datamanager")); - m_CurrentSelection = sel.Cast(); - m_SelListener.Cast()->DoSelectionChanged(sel); - QmitkFunctionality::Activated(); + } void QmitkControlVisualizationPropertiesView::Deactivated() { - QmitkFunctionality::Deactivated(); -} -int QmitkControlVisualizationPropertiesView::GetSizeFlags(bool width) -{ - if(!width) - { - return berry::Constants::MIN | berry::Constants::MAX | berry::Constants::FILL; - } - else - { - return 0; - } -} - -int QmitkControlVisualizationPropertiesView::ComputePreferredSize(bool width, int /*availableParallel*/, int /*availablePerpendicular*/, int preferredResult) -{ - if(width==false) - { - return m_FoundSingleOdfImage ? 120 : 80; - } - else - { - return preferredResult; - } } // set diffusion image channel to b0 volume void QmitkControlVisualizationPropertiesView::NodeAdded(const mitk::DataNode *node) { mitk::DataNode* notConst = const_cast(node); bool isDiffusionImage( mitk::DiffusionPropertyHelper::IsDiffusionWeightedImage( dynamic_cast(node->GetData())) ); if (isDiffusionImage) { mitk::Image::Pointer dimg = dynamic_cast(notConst->GetData()); // if there is no b0 image in the dataset, the GetB0Indices() returns a vector of size 0 // and hence we cannot set the Property directly to .front() int displayChannelPropertyValue = 0; mitk::BValueMapProperty* bmapproperty = static_cast(dimg->GetProperty(mitk::DiffusionPropertyHelper::BVALUEMAPPROPERTYNAME.c_str()).GetPointer() ); mitk::DiffusionPropertyHelper::BValueMapType map = bmapproperty->GetBValueMap(); if( map[0].size() > 0) displayChannelPropertyValue = map[0].front(); notConst->SetIntProperty("DisplayChannel", displayChannelPropertyValue ); } } /* OnSelectionChanged is registered to SelectionService, therefore no need to implement SelectionService Listener explicitly */ void QmitkControlVisualizationPropertiesView::OnSelectionChanged( std::vector nodes ) { + m_Controls->m_BundleControlsFrame->setVisible(false); + m_Controls->m_ImageControlsFrame->setVisible(false); + + if (nodes.size()>1) // only do stuff if one node is selected + return; - // deactivate channel slider if no diffusion weighted image or tbss image is selected - m_Controls->m_DisplayIndex->setVisible(false); - m_Controls->m_DisplayIndexSpinBox->setVisible(false); - m_Controls->label_channel->setVisible(false); + m_Controls->m_NumberGlyphsFrame->setVisible(false); + m_Controls->m_GlyphFrame->setVisible(false); + m_Controls->m_TSMenu->setVisible(false); + m_SelectedNode = NULL; + + int numOdfImages = 0; for( std::vector::iterator it = nodes.begin(); it != nodes.end(); ++it ) { mitk::DataNode::Pointer node = *it; + if(node.IsNull()) + continue; - float color[3]; - node->GetColor(color); - m_Controls->m_Color->setAutoFillBackground(true); - QString styleSheet = "background-color:rgb("; - styleSheet.append(QString::number(color[0]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[1]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[2]*255.0)); - styleSheet.append(")"); - m_Controls->m_Color->setStyleSheet(styleSheet); - - // check if node has data, - // if some helper nodes are shown in the DataManager, the GetData() returns 0x0 which would lead to SIGSEV mitk::BaseData* nodeData = node->GetData(); if(nodeData == NULL) continue; - bool isDiffusionImage( mitk::DiffusionPropertyHelper::IsDiffusionWeightedImage( dynamic_cast(node->GetData())) ); + m_SelectedNode = node; - - if (node.IsNotNull() && (dynamic_cast(nodeData) || - isDiffusionImage)) - { - m_Controls->m_DisplayIndex->setVisible(true); - m_Controls->m_DisplayIndexSpinBox->setVisible(true); - m_Controls->label_channel->setVisible(true); - } - else if (node.IsNotNull() && dynamic_cast(node->GetData())) + if (dynamic_cast(nodeData)) { + // handle fiber bundle property observers if (m_Color.IsNotNull()) m_Color->RemoveObserver(m_FiberBundleObserverTag); - itk::ReceptorMemberCommand::Pointer command = itk::ReceptorMemberCommand::New(); command->SetCallbackFunction( this, &QmitkControlVisualizationPropertiesView::SetFiberBundleCustomColor ); m_Color = dynamic_cast(node->GetProperty("color", NULL)); if (m_Color.IsNotNull()) m_FiberBundleObserverTag = m_Color->AddObserver( itk::ModifiedEvent(), command ); if (m_Opacity.IsNotNull()) m_Opacity->RemoveObserver(m_FiberBundleObserveOpacityTag); itk::ReceptorMemberCommand::Pointer command2 = itk::ReceptorMemberCommand::New(); command2->SetCallbackFunction( this, &QmitkControlVisualizationPropertiesView::SetFiberBundleOpacity ); m_Opacity = dynamic_cast(node->GetProperty("opacity", NULL)); if (m_Opacity.IsNotNull()) m_FiberBundleObserveOpacityTag = m_Opacity->AddObserver( itk::ModifiedEvent(), command2 ); - } - } - - for( std::vector::iterator it = nodes.begin(); it != nodes.end(); ++it ) - { - mitk::DataNode::Pointer node = *it; - // check if node has data, - // if some helper nodes are shown in the DataManager, the GetData() returns 0x0 which would lead to SIGSEV - mitk::BaseData* nodeData = node->GetData(); - if(nodeData == NULL) - continue; + m_Controls->m_BundleControlsFrame->setVisible(true); - if( node.IsNotNull() && (dynamic_cast(nodeData) || dynamic_cast(nodeData)) ) + // ??? + if(m_CurrentPickingNode != 0 && node.GetPointer() != m_CurrentPickingNode) + m_Controls->m_Crosshair->setEnabled(false); + else + m_Controls->m_Crosshair->setEnabled(true); + + int width; + node->GetIntProperty("LineWidth", width); + m_Controls->m_LineWidth->setValue(width); + + float range; + node->GetFloatProperty("Fiber2DSliceThickness",range); + mitk::FiberBundleX::Pointer fib = dynamic_cast(node->GetData()); + mitk::BaseGeometry::Pointer geo = fib->GetGeometry(); + mitk::ScalarType max = geo->GetExtentInMM(0); + max = std::max(max, geo->GetExtentInMM(1)); + max = std::max(max, geo->GetExtentInMM(2)); + + m_Controls->m_FiberThicknessSlider->setMaximum(max * 10); + m_Controls->m_FiberThicknessSlider->setValue(range * 10); + m_Controls->m_FiberThicknessSlider->setFocus(); + } + else if(dynamic_cast(nodeData) || dynamic_cast(nodeData)) { + m_Controls->m_ImageControlsFrame->setVisible(true); + m_Controls->m_NumberGlyphsFrame->setVisible(true); + m_Controls->m_GlyphFrame->setVisible(true); + if(m_NodeUsedForOdfVisualization.IsNotNull()) { m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_S", false); m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_C", false); m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_T", false); } m_NodeUsedForOdfVisualization = node; m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_S", m_GlyIsOn_S); m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_C", m_GlyIsOn_C); m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_T", m_GlyIsOn_T); - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); - m_Controls->m_TSMenu->setVisible(false); // deactivate mip etc. for tensor and q-ball images - break; + int val; + node->GetIntProperty("ShowMaxNumber", val); + m_Controls->m_ShowMaxNumber->setValue(val); + + m_Controls->m_NormalizationDropdown->setCurrentIndex(dynamic_cast(node->GetProperty("Normalization"))->GetValueAsId()); + + float fval; + node->GetFloatProperty("Scaling",fval); + m_Controls->m_ScalingFactor->setValue(fval); + + m_Controls->m_AdditionalScaling->setCurrentIndex(dynamic_cast(node->GetProperty("ScaleBy"))->GetValueAsId()); + + numOdfImages++; } - else if( node.IsNotNull() && dynamic_cast(nodeData) ) - m_Controls->m_TSMenu->setVisible(false); - else + else if(dynamic_cast(nodeData)) + { + PlanarFigureFocus(); + } + else if( dynamic_cast(nodeData) ) + { + m_Controls->m_ImageControlsFrame->setVisible(true); m_Controls->m_TSMenu->setVisible(true); + } } - // if selection changes, set the current selction member and call SellListener::DoSelectionChanged - berry::ISelection::ConstPointer sel( - this->GetSite()->GetWorkbenchWindow()->GetSelectionService()->GetSelection("org.mitk.views.datamanager")); - m_CurrentSelection = sel.Cast(); - m_SelListener.Cast()->DoSelectionChanged(sel); - - // adapt thick slice controls - // THICK SLICE SUPPORT - - if( nodes.size() < 1) + if( nodes.empty() ) return; mitk::DataNode::Pointer node = nodes.at(0); if( node.IsNull() ) return; QMenu *myMenu = m_MyMenu; myMenu->clear(); QActionGroup* thickSlicesActionGroup = new QActionGroup(myMenu); thickSlicesActionGroup->setExclusive(true); int currentTSMode = 0; { mitk::ResliceMethodProperty::Pointer m = dynamic_cast(node->GetProperty( "reslice.thickslices" )); if( m.IsNotNull() ) currentTSMode = m->GetValueAsId(); } int maxTS = 30; for( std::vector::iterator it = nodes.begin(); it != nodes.end(); ++it ) { mitk::Image* image = dynamic_cast((*it)->GetData()); if (image) { int size = std::max(image->GetDimension(0), std::max(image->GetDimension(1), image->GetDimension(2))); if (size>maxTS) maxTS=size; } } maxTS /= 2; int currentNum = 0; { mitk::IntProperty::Pointer m = dynamic_cast(node->GetProperty( "reslice.thickslices.num" )); if( m.IsNotNull() ) { currentNum = m->GetValue(); if(currentNum < 0) currentNum = 0; if(currentNum > maxTS) currentNum = maxTS; } } if(currentTSMode==0) currentNum=0; QSlider *m_TSSlider = new QSlider(myMenu); m_TSSlider->setMinimum(0); m_TSSlider->setMaximum(maxTS-1); m_TSSlider->setValue(currentNum); m_TSSlider->setOrientation(Qt::Horizontal); connect( m_TSSlider, SIGNAL( valueChanged(int) ), this, SLOT( OnTSNumChanged(int) ) ); QHBoxLayout* _TSLayout = new QHBoxLayout; _TSLayout->setContentsMargins(4,4,4,4); _TSLayout->addWidget(m_TSSlider); _TSLayout->addWidget(m_TSLabel=new QLabel(QString::number(currentNum*2+1),myMenu)); QWidget* _TSWidget = new QWidget; _TSWidget->setLayout(_TSLayout); QActionGroup* thickSliceModeActionGroup = new QActionGroup(myMenu); thickSliceModeActionGroup->setExclusive(true); QWidgetAction *m_TSSliderAction = new QWidgetAction(myMenu); m_TSSliderAction->setDefaultWidget(_TSWidget); myMenu->addAction(m_TSSliderAction); QAction* mipThickSlicesAction = new QAction(myMenu); mipThickSlicesAction->setActionGroup(thickSliceModeActionGroup); mipThickSlicesAction->setText("MIP (max. intensity proj.)"); mipThickSlicesAction->setCheckable(true); mipThickSlicesAction->setChecked(currentThickSlicesMode==1); mipThickSlicesAction->setData(1); myMenu->addAction( mipThickSlicesAction ); QAction* sumThickSlicesAction = new QAction(myMenu); sumThickSlicesAction->setActionGroup(thickSliceModeActionGroup); sumThickSlicesAction->setText("SUM (sum intensity proj.)"); sumThickSlicesAction->setCheckable(true); sumThickSlicesAction->setChecked(currentThickSlicesMode==2); sumThickSlicesAction->setData(2); myMenu->addAction( sumThickSlicesAction ); QAction* weightedThickSlicesAction = new QAction(myMenu); weightedThickSlicesAction->setActionGroup(thickSliceModeActionGroup); weightedThickSlicesAction->setText("WEIGHTED (gaussian proj.)"); weightedThickSlicesAction->setCheckable(true); weightedThickSlicesAction->setChecked(currentThickSlicesMode==3); weightedThickSlicesAction->setData(3); myMenu->addAction( weightedThickSlicesAction ); connect( thickSliceModeActionGroup, SIGNAL(triggered(QAction*)), this, SLOT(OnThickSlicesModeSelected(QAction*)) ); - -} - -mitk::DataStorage::SetOfObjects::Pointer -QmitkControlVisualizationPropertiesView::ActiveSet(std::string classname) -{ - if (m_CurrentSelection) - { - mitk::DataStorage::SetOfObjects::Pointer set = - mitk::DataStorage::SetOfObjects::New(); - - int at = 0; - for (IStructuredSelection::iterator i = m_CurrentSelection->Begin(); - i != m_CurrentSelection->End(); - ++i) - { - - if (mitk::DataNodeObject::Pointer nodeObj = i->Cast()) - { - mitk::DataNode::Pointer node = nodeObj->GetDataNode(); - - // check if node has data, - // if some helper nodes are shown in the DataManager, the GetData() returns 0x0 which would lead to SIGSEV - const mitk::BaseData* nodeData = node->GetData(); - if(nodeData == NULL) - continue; - - if(QString(classname.c_str()).compare(nodeData->GetNameOfClass())==0) - { - set->InsertElement(at++, node); - } - } - } - - return set; - } - - return 0; -} - -void QmitkControlVisualizationPropertiesView::SetBoolProp( - mitk::DataStorage::SetOfObjects::Pointer set, - std::string name, bool value) -{ - if(set.IsNotNull()) - { - - mitk::DataStorage::SetOfObjects::const_iterator itemiter( set->begin() ); - mitk::DataStorage::SetOfObjects::const_iterator itemiterend( set->end() ); - while ( itemiter != itemiterend ) - { - (*itemiter)->SetBoolProperty(name.c_str(), value); - ++itemiter; - } - } -} - -void QmitkControlVisualizationPropertiesView::SetIntProp( - mitk::DataStorage::SetOfObjects::Pointer set, - std::string name, int value) -{ - if(set.IsNotNull()) - { - - mitk::DataStorage::SetOfObjects::const_iterator itemiter( set->begin() ); - mitk::DataStorage::SetOfObjects::const_iterator itemiterend( set->end() ); - while ( itemiter != itemiterend ) - { - (*itemiter)->SetIntProperty(name.c_str(), value); - ++itemiter; - } - } -} - -void QmitkControlVisualizationPropertiesView::SetFloatProp( - mitk::DataStorage::SetOfObjects::Pointer set, - std::string name, float value) -{ - if(set.IsNotNull()) - { - - mitk::DataStorage::SetOfObjects::const_iterator itemiter( set->begin() ); - mitk::DataStorage::SetOfObjects::const_iterator itemiterend( set->end() ); - while ( itemiter != itemiterend ) - { - (*itemiter)->SetFloatProperty(name.c_str(), value); - ++itemiter; - } - } -} - -void QmitkControlVisualizationPropertiesView::SetLevelWindowProp( - mitk::DataStorage::SetOfObjects::Pointer set, - std::string name, mitk::LevelWindow value) -{ - if(set.IsNotNull()) - { - - mitk::LevelWindowProperty::Pointer prop = mitk::LevelWindowProperty::New(value); - - mitk::DataStorage::SetOfObjects::const_iterator itemiter( set->begin() ); - mitk::DataStorage::SetOfObjects::const_iterator itemiterend( set->end() ); - while ( itemiter != itemiterend ) - { - (*itemiter)->SetProperty(name.c_str(), prop); - ++itemiter; - } - } -} - -void QmitkControlVisualizationPropertiesView::SetEnumProp( - mitk::DataStorage::SetOfObjects::Pointer set, - std::string name, mitk::EnumerationProperty::Pointer value) -{ - if(set.IsNotNull()) - { - mitk::DataStorage::SetOfObjects::const_iterator itemiter( set->begin() ); - mitk::DataStorage::SetOfObjects::const_iterator itemiterend( set->end() ); - while ( itemiter != itemiterend ) - { - (*itemiter)->SetProperty(name.c_str(), value); - ++itemiter; - } - } -} - - - -void QmitkControlVisualizationPropertiesView::DisplayIndexChanged(int dispIndex) -{ - - m_Controls->m_DisplayIndex->setValue(dispIndex); - m_Controls->m_DisplayIndexSpinBox->setValue(dispIndex); - - QString label = "Channel %1"; - label = label.arg(dispIndex); - m_Controls->label_channel->setText(label); - - std::vector sets; - sets.push_back("TbssImage"); - - std::vector::iterator it = sets.begin(); - while(it != sets.end()) - { - std::string s = *it; - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet(s); - - if(set.IsNotNull()) - { - - mitk::DataStorage::SetOfObjects::const_iterator itemiter( set->begin() ); - mitk::DataStorage::SetOfObjects::const_iterator itemiterend( set->end() ); - while ( itemiter != itemiterend ) - { - (*itemiter)->SetIntProperty("DisplayChannel", dispIndex); - ++itemiter; - } - - //m_MultiWidget->RequestUpdate(); - mitk::RenderingManager::GetInstance()->RequestUpdateAll(); - } - - it++; - } - - -} - -void QmitkControlVisualizationPropertiesView::Reinit() -{ - if (m_CurrentSelection) - { - mitk::DataNodeObject::Pointer nodeObj = - m_CurrentSelection->Begin()->Cast(); - mitk::DataNode::Pointer node = nodeObj->GetDataNode(); - mitk::BaseData::Pointer basedata = node->GetData(); - if (basedata.IsNotNull()) - { - mitk::RenderingManager::GetInstance()->InitializeViews( - basedata->GetTimeGeometry(), mitk::RenderingManager::REQUEST_UPDATE_ALL, true ); - mitk::RenderingManager::GetInstance()->RequestUpdateAll(); - } - } -} - -void QmitkControlVisualizationPropertiesView::TextIntON() -{ - if(m_TexIsOn) - { - m_Controls->m_TextureIntON->setIcon(*m_IconTexOFF); - } - else - { - m_Controls->m_TextureIntON->setIcon(*m_IconTexON); - } - - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("DiffusionImage"); - SetBoolProp(set,"texture interpolation", !m_TexIsOn); - - set = ActiveSet("TensorImage"); - SetBoolProp(set,"texture interpolation", !m_TexIsOn); - - set = ActiveSet("QBallImage"); - SetBoolProp(set,"texture interpolation", !m_TexIsOn); - - set = ActiveSet("Image"); - SetBoolProp(set,"texture interpolation", !m_TexIsOn); - - m_TexIsOn = !m_TexIsOn; - - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); - } void QmitkControlVisualizationPropertiesView::VisibleOdfsON_S() { m_GlyIsOn_S = m_Controls->m_VisibleOdfsON_S->isChecked(); if (m_NodeUsedForOdfVisualization.IsNull()) { MITK_WARN << "ODF visualization activated but m_NodeUsedForOdfVisualization is NULL"; return; } m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_S", m_GlyIsOn_S); - VisibleOdfsON(0); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } void QmitkControlVisualizationPropertiesView::VisibleOdfsON_T() { m_GlyIsOn_T = m_Controls->m_VisibleOdfsON_T->isChecked(); if (m_NodeUsedForOdfVisualization.IsNull()) { MITK_WARN << "ODF visualization activated but m_NodeUsedForOdfVisualization is NULL"; return; } m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_T", m_GlyIsOn_T); - VisibleOdfsON(1); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } void QmitkControlVisualizationPropertiesView::VisibleOdfsON_C() { m_GlyIsOn_C = m_Controls->m_VisibleOdfsON_C->isChecked(); if (m_NodeUsedForOdfVisualization.IsNull()) { MITK_WARN << "ODF visualization activated but m_NodeUsedForOdfVisualization is NULL"; return; } m_NodeUsedForOdfVisualization->SetBoolProperty("VisibleOdfs_C", m_GlyIsOn_C); - VisibleOdfsON(2); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } bool QmitkControlVisualizationPropertiesView::IsPlaneRotated() { - - // for all 2D renderwindows of m_MultiWidget check alignment - mitk::PlaneGeometry::ConstPointer displayPlane = dynamic_cast( m_MultiWidget->GetRenderWindow1()->GetRenderer()->GetCurrentWorldGeometry2D() ); - if (displayPlane.IsNull()) return false; - mitk::Image* currentImage = dynamic_cast( m_NodeUsedForOdfVisualization->GetData() ); if( currentImage == NULL ) { MITK_ERROR << " Casting problems. Returning false"; return false; } - int affectedDimension(-1); - int affectedSlice(-1); - return !(DetermineAffectedImageSlice( currentImage, displayPlane, affectedDimension, affectedSlice )); - -} - -void QmitkControlVisualizationPropertiesView::VisibleOdfsON(int view) -{ - - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); + mitk::Vector3D imageNormal0 = currentImage->GetSlicedGeometry()->GetAxisVector(0); + mitk::Vector3D imageNormal1 = currentImage->GetSlicedGeometry()->GetAxisVector(1); + mitk::Vector3D imageNormal2 = currentImage->GetSlicedGeometry()->GetAxisVector(2); + imageNormal0.Normalize(); + imageNormal1.Normalize(); + imageNormal2.Normalize(); + double eps = 0.000001; + // for all 2D renderwindows of m_MultiWidget check alignment + { + mitk::PlaneGeometry::ConstPointer displayPlane = dynamic_cast( m_MultiWidget->GetRenderWindow1()->GetRenderer()->GetCurrentWorldGeometry2D() ); + if (displayPlane.IsNull()) return false; + mitk::Vector3D normal = displayPlane->GetNormal(); + normal.Normalize(); + int test = 0; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal0.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal1.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal2.GetVnlVector()))-1) > eps ) + test++; + if (test==3) + return true; + } + { + mitk::PlaneGeometry::ConstPointer displayPlane = dynamic_cast( m_MultiWidget->GetRenderWindow2()->GetRenderer()->GetCurrentWorldGeometry2D() ); + if (displayPlane.IsNull()) return false; + mitk::Vector3D normal = displayPlane->GetNormal(); + normal.Normalize(); + int test = 0; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal0.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal1.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal2.GetVnlVector()))-1) > eps ) + test++; + if (test==3) + return true; + } + { + mitk::PlaneGeometry::ConstPointer displayPlane = dynamic_cast( m_MultiWidget->GetRenderWindow3()->GetRenderer()->GetCurrentWorldGeometry2D() ); + if (displayPlane.IsNull()) return false; + mitk::Vector3D normal = displayPlane->GetNormal(); + normal.Normalize(); + int test = 0; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal0.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal1.GetVnlVector()))-1) > eps ) + test++; + if( fabs(fabs(dot_product(normal.GetVnlVector(),imageNormal2.GetVnlVector()))-1) > eps ) + test++; + if (test==3) + return true; + } + + return false; } void QmitkControlVisualizationPropertiesView::ShowMaxNumberChanged() { int maxNr = m_Controls->m_ShowMaxNumber->value(); if ( maxNr < 1 ) { m_Controls->m_ShowMaxNumber->setValue( 1 ); maxNr = 1; } - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("QBallImage"); - SetIntProp(set,"ShowMaxNumber", maxNr); - - set = ActiveSet("TensorImage"); - SetIntProp(set,"ShowMaxNumber", maxNr); - - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); + if (dynamic_cast(m_SelectedNode->GetData()) || dynamic_cast(m_SelectedNode->GetData())) + m_SelectedNode->SetIntProperty("ShowMaxNumber", maxNr); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } void QmitkControlVisualizationPropertiesView::NormalizationDropdownChanged(int normDropdown) { typedef mitk::OdfNormalizationMethodProperty PropType; PropType::Pointer normMeth = PropType::New(); switch(normDropdown) { case 0: normMeth->SetNormalizationToMinMax(); break; case 1: normMeth->SetNormalizationToMax(); break; case 2: normMeth->SetNormalizationToNone(); break; case 3: normMeth->SetNormalizationToGlobalMax(); break; default: normMeth->SetNormalizationToMinMax(); } - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("QBallImage"); - SetEnumProp(set,"Normalization", normMeth.GetPointer()); + if (dynamic_cast(m_SelectedNode->GetData()) || dynamic_cast(m_SelectedNode->GetData())) + m_SelectedNode->SetProperty("Normalization", normMeth.GetPointer()); - set = ActiveSet("TensorImage"); - SetEnumProp(set,"Normalization", normMeth.GetPointer()); - - // if(m_MultiWidget) - // m_MultiWidget->RequestUpdate(); mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } void QmitkControlVisualizationPropertiesView::ScalingFactorChanged(double scalingFactor) { - - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("QBallImage"); - SetFloatProp(set,"Scaling", scalingFactor); - - set = ActiveSet("TensorImage"); - SetFloatProp(set,"Scaling", scalingFactor); + if (dynamic_cast(m_SelectedNode->GetData()) || dynamic_cast(m_SelectedNode->GetData())) + m_SelectedNode->SetFloatProperty("Scaling", scalingFactor); if(m_MultiWidget) m_MultiWidget->RequestUpdate(); - } void QmitkControlVisualizationPropertiesView::AdditionalScaling(int additionalScaling) { typedef mitk::OdfScaleByProperty PropType; PropType::Pointer scaleBy = PropType::New(); switch(additionalScaling) { case 0: scaleBy->SetScaleByNothing(); break; case 1: scaleBy->SetScaleByGFA(); //m_Controls->params_frame->setVisible(true); break; #ifdef DIFFUSION_IMAGING_EXTENDED case 2: scaleBy->SetScaleByPrincipalCurvature(); // commented in for SPIE paper, Principle curvature scaling //m_Controls->params_frame->setVisible(true); break; #endif default: scaleBy->SetScaleByNothing(); } - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("QBallImage"); - SetEnumProp(set,"ScaleBy", scaleBy.GetPointer()); - - set = ActiveSet("TensorImage"); - SetEnumProp(set,"ScaleBy", scaleBy.GetPointer()); - - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); - -} - -void QmitkControlVisualizationPropertiesView::IndexParam1Changed(double param1) -{ - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("QBallImage"); - SetFloatProp(set,"IndexParam1", param1); - - set = ActiveSet("TensorImage"); - SetFloatProp(set,"IndexParam1", param1); - - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); -} - -void QmitkControlVisualizationPropertiesView::IndexParam2Changed(double param2) -{ - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("QBallImage"); - SetFloatProp(set,"IndexParam2", param2); - - set = ActiveSet("TensorImage"); - SetFloatProp(set,"IndexParam2", param2); - - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); -} - -void QmitkControlVisualizationPropertiesView::OpacityChanged(double l, double u) -{ - mitk::LevelWindow olw; - olw.SetRangeMinMax(l*255, u*255); - - mitk::DataStorage::SetOfObjects::Pointer set = - ActiveSet("QBallImage"); - SetLevelWindowProp(set,"opaclevelwindow", olw); - - set = ActiveSet("TensorImage"); - SetLevelWindowProp(set,"opaclevelwindow", olw); - - set = ActiveSet("Image"); - SetLevelWindowProp(set,"opaclevelwindow", olw); - - m_Controls->m_OpacityMinFaLabel->setText(QString::number(l,'f',2) + " : " + QString::number(u,'f',2)); - - if(m_MultiWidget) - m_MultiWidget->RequestUpdate(); + if (dynamic_cast(m_SelectedNode->GetData()) || dynamic_cast(m_SelectedNode->GetData())) + m_SelectedNode->SetProperty("Normalization", scaleBy.GetPointer()); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } void QmitkControlVisualizationPropertiesView::ScalingCheckbox() { m_Controls->m_ScalingFrame->setVisible( m_Controls->m_ScalingCheckbox->isChecked()); if(!m_Controls->m_ScalingCheckbox->isChecked()) { m_Controls->m_AdditionalScaling->setCurrentIndex(0); m_Controls->m_ScalingFactor->setValue(1.0); } } void QmitkControlVisualizationPropertiesView::Fiber2DfadingEFX() { if (m_SelectedNode && dynamic_cast(m_SelectedNode->GetData()) ) { bool currentMode; m_SelectedNode->GetBoolProperty("Fiber2DfadeEFX", currentMode); m_SelectedNode->SetProperty("Fiber2DfadeEFX", mitk::BoolProperty::New(!currentMode)); dynamic_cast(m_SelectedNode->GetData())->RequestUpdate2D(); - mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } - } void QmitkControlVisualizationPropertiesView::FiberSlicingThickness2D() { if (m_SelectedNode && dynamic_cast(m_SelectedNode->GetData())) { float fibThickness = m_Controls->m_FiberThicknessSlider->value() * 0.1; float currentThickness = 0; m_SelectedNode->GetFloatProperty("Fiber2DSliceThickness", currentThickness); if (fabs(fibThickness-currentThickness)<0.001) return; m_SelectedNode->SetProperty("Fiber2DSliceThickness", mitk::FloatProperty::New(fibThickness)); dynamic_cast(m_SelectedNode->GetData())->RequestUpdate2D(); - mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } } void QmitkControlVisualizationPropertiesView::FiberSlicingUpdateLabel(int value) { QString label = "Range %1 mm"; label = label.arg(value * 0.1); m_Controls->label_range->setText(label); - this->FiberSlicingThickness2D(); + FiberSlicingThickness2D(); } void QmitkControlVisualizationPropertiesView::SetFiberBundleOpacity(const itk::EventObject& /*e*/) { if(m_SelectedNode) { mitk::FiberBundleX::Pointer fib = dynamic_cast(m_SelectedNode->GetData()); fib->RequestUpdate(); - mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } } void QmitkControlVisualizationPropertiesView::SetFiberBundleCustomColor(const itk::EventObject& /*e*/) { if(m_SelectedNode && dynamic_cast(m_SelectedNode->GetData())) { float color[3]; m_SelectedNode->GetColor(color); - m_Controls->m_Color->setAutoFillBackground(true); - QString styleSheet = "background-color:rgb("; - styleSheet.append(QString::number(color[0]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[1]*255.0)); - styleSheet.append(","); - styleSheet.append(QString::number(color[2]*255.0)); - styleSheet.append(")"); - m_Controls->m_Color->setStyleSheet(styleSheet); - -// m_SelectedNode->SetProperty("color",mitk::ColorProperty::New(color[0], color[1], color[2])); mitk::FiberBundleX::Pointer fib = dynamic_cast(m_SelectedNode->GetData()); fib->SetFiberColors(color[0]*255, color[1]*255, color[2]*255); - mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); - } -} - -void QmitkControlVisualizationPropertiesView::BundleRepresentationColor() -{ - if(m_SelectedNode && dynamic_cast(m_SelectedNode->GetData())) - { - QColor color; - color.setRgba(QColorDialog::getRgba()); - if (!color.isValid()) - return; - - m_Controls->m_Color->setAutoFillBackground(true); - QString styleSheet = "background-color:rgb("; - styleSheet.append(QString::number(color.red())); - styleSheet.append(","); - styleSheet.append(QString::number(color.green())); - styleSheet.append(","); - styleSheet.append(QString::number(color.blue())); - styleSheet.append(")"); - m_Controls->m_Color->setStyleSheet(styleSheet); - - mitk::FiberBundleX::Pointer fib = dynamic_cast(m_SelectedNode->GetData()); - m_SelectedNode->SetOpacity(color.alpha()/255.0); - fib->SetFiberColors(color.red(), color.green(), color.blue(), color.alpha()); - mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } } void QmitkControlVisualizationPropertiesView::BundleRepresentationResetColoring() { if(m_SelectedNode && dynamic_cast(m_SelectedNode->GetData())) { - m_Controls->m_Color->setAutoFillBackground(true); - QString styleSheet = "background-color:rgb(255,255,255)"; - m_Controls->m_Color->setStyleSheet(styleSheet); mitk::FiberBundleX::Pointer fib = dynamic_cast(m_SelectedNode->GetData()); fib->DoColorCodingOrientationBased(); - mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } } void QmitkControlVisualizationPropertiesView::PlanarFigureFocus() { if(m_SelectedNode) { mitk::PlanarFigure* _PlanarFigure = 0; _PlanarFigure = dynamic_cast (m_SelectedNode->GetData()); if (_PlanarFigure && _PlanarFigure->GetPlaneGeometry()) { QmitkRenderWindow* selectedRenderWindow = 0; bool PlanarFigureInitializedWindow = false; QmitkRenderWindow* RenderWindow1 = this->GetActiveStdMultiWidget()->GetRenderWindow1(); if (m_SelectedNode->GetBoolProperty("PlanarFigureInitializedWindow", PlanarFigureInitializedWindow, RenderWindow1->GetRenderer())) { selectedRenderWindow = RenderWindow1; } QmitkRenderWindow* RenderWindow2 = this->GetActiveStdMultiWidget()->GetRenderWindow2(); if (!selectedRenderWindow && m_SelectedNode->GetBoolProperty( "PlanarFigureInitializedWindow", PlanarFigureInitializedWindow, RenderWindow2->GetRenderer())) { selectedRenderWindow = RenderWindow2; } QmitkRenderWindow* RenderWindow3 = this->GetActiveStdMultiWidget()->GetRenderWindow3(); if (!selectedRenderWindow && m_SelectedNode->GetBoolProperty( "PlanarFigureInitializedWindow", PlanarFigureInitializedWindow, RenderWindow3->GetRenderer())) { selectedRenderWindow = RenderWindow3; } QmitkRenderWindow* RenderWindow4 = this->GetActiveStdMultiWidget()->GetRenderWindow4(); if (!selectedRenderWindow && m_SelectedNode->GetBoolProperty( "PlanarFigureInitializedWindow", PlanarFigureInitializedWindow, RenderWindow4->GetRenderer())) { selectedRenderWindow = RenderWindow4; } const mitk::PlaneGeometry* _PlaneGeometry = _PlanarFigure->GetPlaneGeometry(); mitk::VnlVector normal = _PlaneGeometry->GetNormalVnl(); mitk::Geometry2D::ConstPointer worldGeometry1 = RenderWindow1->GetRenderer()->GetCurrentWorldGeometry2D(); mitk::PlaneGeometry::ConstPointer _Plane1 = dynamic_cast( worldGeometry1.GetPointer() ); mitk::VnlVector normal1 = _Plane1->GetNormalVnl(); mitk::Geometry2D::ConstPointer worldGeometry2 = RenderWindow2->GetRenderer()->GetCurrentWorldGeometry2D(); mitk::PlaneGeometry::ConstPointer _Plane2 = dynamic_cast( worldGeometry2.GetPointer() ); mitk::VnlVector normal2 = _Plane2->GetNormalVnl(); mitk::Geometry2D::ConstPointer worldGeometry3 = RenderWindow3->GetRenderer()->GetCurrentWorldGeometry2D(); mitk::PlaneGeometry::ConstPointer _Plane3 = dynamic_cast( worldGeometry3.GetPointer() ); mitk::VnlVector normal3 = _Plane3->GetNormalVnl(); normal[0] = fabs(normal[0]); normal[1] = fabs(normal[1]); normal[2] = fabs(normal[2]); normal1[0] = fabs(normal1[0]); normal1[1] = fabs(normal1[1]); normal1[2] = fabs(normal1[2]); normal2[0] = fabs(normal2[0]); normal2[1] = fabs(normal2[1]); normal2[2] = fabs(normal2[2]); normal3[0] = fabs(normal3[0]); normal3[1] = fabs(normal3[1]); normal3[2] = fabs(normal3[2]); double ang1 = angle(normal, normal1); double ang2 = angle(normal, normal2); double ang3 = angle(normal, normal3); if(ang1 < ang2 && ang1 < ang3) { selectedRenderWindow = RenderWindow1; } else { if(ang2 < ang3) { selectedRenderWindow = RenderWindow2; } else { selectedRenderWindow = RenderWindow3; } } // make node visible if (selectedRenderWindow) { const mitk::Point3D& centerP = _PlaneGeometry->GetOrigin(); selectedRenderWindow->GetSliceNavigationController()->ReorientSlices( centerP, _PlaneGeometry->GetNormal()); } } // set interactor for new node (if not already set) mitk::PlanarFigureInteractor::Pointer figureInteractor = dynamic_cast(m_SelectedNode->GetDataInteractor().GetPointer()); if(figureInteractor.IsNull()) { figureInteractor = mitk::PlanarFigureInteractor::New(); us::Module* planarFigureModule = us::ModuleRegistry::GetModule( "MitkPlanarFigure" ); figureInteractor->LoadStateMachine("PlanarFigureInteraction.xml", planarFigureModule ); figureInteractor->SetEventConfig( "PlanarFigureConfig.xml", planarFigureModule ); figureInteractor->SetDataNode( m_SelectedNode ); } m_SelectedNode->SetProperty("planarfigure.iseditable",mitk::BoolProperty::New(true)); } } void QmitkControlVisualizationPropertiesView::SetInteractor() { typedef std::vector Container; Container _NodeSet = this->GetDataManagerSelection(); mitk::DataNode* node = 0; mitk::FiberBundleX* bundle = 0; mitk::FiberBundleInteractor::Pointer bundleInteractor = 0; // finally add all nodes to the model for(Container::const_iterator it=_NodeSet.begin(); it!=_NodeSet.end() ; it++) { node = const_cast(*it); bundle = dynamic_cast(node->GetData()); if(bundle) { bundleInteractor = dynamic_cast(node->GetInteractor()); if(bundleInteractor.IsNotNull()) mitk::GlobalInteraction::GetInstance()->RemoveInteractor(bundleInteractor); if(!m_Controls->m_Crosshair->isChecked()) { m_Controls->m_Crosshair->setChecked(false); this->GetActiveStdMultiWidget()->GetRenderWindow4()->setCursor(Qt::ArrowCursor); m_CurrentPickingNode = 0; } else { m_Controls->m_Crosshair->setChecked(true); bundleInteractor = mitk::FiberBundleInteractor::New("FiberBundleInteractor", node); mitk::GlobalInteraction::GetInstance()->AddInteractor(bundleInteractor); this->GetActiveStdMultiWidget()->GetRenderWindow4()->setCursor(Qt::CrossCursor); m_CurrentPickingNode = node; } } } - -} - -void QmitkControlVisualizationPropertiesView::PFWidth(int w) -{ - - double width = w/10.0; - m_SelectedNode->SetProperty("planarfigure.line.width", mitk::FloatProperty::New(width) ); - m_SelectedNode->SetProperty("planarfigure.shadow.widthmodifier", mitk::FloatProperty::New(width) ); - m_SelectedNode->SetProperty("planarfigure.outline.width", mitk::FloatProperty::New(width) ); - m_SelectedNode->SetProperty("planarfigure.helperline.width", mitk::FloatProperty::New(width) ); - - mitk::RenderingManager::GetInstance()->RequestUpdateAll(); - - QString label = "Width %1"; - label = label.arg(width); - m_Controls->label_pfwidth->setText(label); - -} - -void QmitkControlVisualizationPropertiesView::PFColor() -{ - - QColor color = QColorDialog::getColor(); - if (!color.isValid()) - return; - - m_Controls->m_PFColor->setAutoFillBackground(true); - QString styleSheet = "background-color:rgb("; - styleSheet.append(QString::number(color.red())); - styleSheet.append(","); - styleSheet.append(QString::number(color.green())); - styleSheet.append(","); - styleSheet.append(QString::number(color.blue())); - styleSheet.append(")"); - m_Controls->m_PFColor->setStyleSheet(styleSheet); - - m_SelectedNode->SetProperty( "planarfigure.default.line.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0)); - m_SelectedNode->SetProperty( "planarfigure.default.outline.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0)); - m_SelectedNode->SetProperty( "planarfigure.default.helperline.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0)); - m_SelectedNode->SetProperty( "planarfigure.default.markerline.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0)); - m_SelectedNode->SetProperty( "planarfigure.default.marker.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0)); - - m_SelectedNode->SetProperty( "planarfigure.hover.line.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0) ); - m_SelectedNode->SetProperty( "planarfigure.hover.outline.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0) ); - m_SelectedNode->SetProperty( "planarfigure.hover.helperline.color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0) ); - m_SelectedNode->SetProperty( "color", mitk::ColorProperty::New(color.red()/255.0, color.green()/255.0, color.blue()/255.0)); - - mitk::RenderingManager::GetInstance()->RequestUpdateAll(); -} - -void QmitkControlVisualizationPropertiesView::GenerateTdi() -{ - if(m_SelectedNode) - { - mitk::FiberBundleX* bundle = dynamic_cast(m_SelectedNode->GetData()); - if(!bundle) - return; - - typedef float OutPixType; - typedef itk::Image OutImageType; - - // run generator - itk::TractDensityImageFilter< OutImageType >::Pointer generator = itk::TractDensityImageFilter< OutImageType >::New(); - generator->SetFiberBundle(bundle); - generator->SetOutputAbsoluteValues(true); - generator->SetUpsamplingFactor(1); - generator->Update(); - - // get result - OutImageType::Pointer outImg = generator->GetOutput(); - - mitk::Image::Pointer img = mitk::Image::New(); - img->InitializeByItk(outImg.GetPointer()); - img->SetVolume(outImg->GetBufferPointer()); - - // to datastorage - mitk::DataNode::Pointer node = mitk::DataNode::New(); - node->SetData(img); - QString name(m_SelectedNode->GetName().c_str()); - name += "_TDI"; - node->SetName(name.toStdString()); - node->SetVisibility(true); - - GetDataStorage()->Add(node); - } } void QmitkControlVisualizationPropertiesView::LineWidthChanged() { if(m_SelectedNode && dynamic_cast(m_SelectedNode->GetData())) { int newWidth = m_Controls->m_LineWidth->value(); int currentWidth = 0; m_SelectedNode->GetIntProperty("LineWidth", currentWidth); if (currentWidth==newWidth) return; m_SelectedNode->SetIntProperty("LineWidth", newWidth); dynamic_cast(m_SelectedNode->GetData())->RequestUpdate2D(); dynamic_cast(m_SelectedNode->GetData())->RequestUpdate3D(); - mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); + mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } } void QmitkControlVisualizationPropertiesView::Welcome() { berry::PlatformUI::GetWorkbench()->GetIntroManager()->ShowIntro( GetSite()->GetWorkbenchWindow(), false); } diff --git a/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.h b/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.h index 0a470ec63b..9c42cd9d08 100644 --- a/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.h +++ b/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesView.h @@ -1,180 +1,153 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef _QMITKControlVisualizationPropertiesView_H_INCLUDED #define _QMITKControlVisualizationPropertiesView_H_INCLUDED #include #include #include "berryISelectionListener.h" #include "berryIStructuredSelection.h" #include "berryISizeProvider.h" #include "ui_QmitkControlVisualizationPropertiesViewControls.h" #include "mitkEnumerationProperty.h" /*! * \ingroup org_mitk_gui_qt_diffusionquantification_internal * * \brief QmitkControlVisualizationPropertiesView * * Document your class here. * * \sa QmitkFunctionality */ class QmitkControlVisualizationPropertiesView : public QmitkFunctionality//, public berry::ISizeProvider { friend struct CvpSelListener; // this is needed for all Qt objects that should have a MOC object (everything that derives from QObject) Q_OBJECT public: static const std::string VIEW_ID; QmitkControlVisualizationPropertiesView(); QmitkControlVisualizationPropertiesView(const QmitkControlVisualizationPropertiesView& other); virtual ~QmitkControlVisualizationPropertiesView(); virtual void CreateQtPartControl(QWidget *parent); /// \brief Creation of the connections of main and control widget virtual void CreateConnections(); /// \brief Called when the functionality is activated virtual void Activated(); virtual void Deactivated(); virtual void StdMultiWidgetAvailable (QmitkStdMultiWidget &stdMultiWidget); virtual void StdMultiWidgetNotAvailable(); - mitk::DataStorage::SetOfObjects::Pointer ActiveSet(std::string); - - void SetBoolProp (mitk::DataStorage::SetOfObjects::Pointer,std::string,bool); - void SetIntProp (mitk::DataStorage::SetOfObjects::Pointer,std::string,int); - void SetFloatProp(mitk::DataStorage::SetOfObjects::Pointer,std::string,float); - void SetLevelWindowProp(mitk::DataStorage::SetOfObjects::Pointer,std::string,mitk::LevelWindow); - void SetEnumProp (mitk::DataStorage::SetOfObjects::Pointer,std::string,mitk::EnumerationProperty::Pointer); - - virtual int GetSizeFlags(bool width); - virtual int ComputePreferredSize(bool width, int availableParallel, int availablePerpendicular, int preferredResult); - protected slots: - void DisplayIndexChanged(int); - void TextIntON(); - void Reinit(); - - void VisibleOdfsON(int view); void VisibleOdfsON_S(); void VisibleOdfsON_T(); void VisibleOdfsON_C(); void ShowMaxNumberChanged(); void NormalizationDropdownChanged(int); void ScalingFactorChanged(double); void AdditionalScaling(int); - void IndexParam1Changed(double); - void IndexParam2Changed(double); - void OpacityChanged(double,double); void ScalingCheckbox(); void OnThickSlicesModeSelected( QAction* action ); void OnTSNumChanged(int num); - void BundleRepresentationColor(); void BundleRepresentationResetColoring(); void PlanarFigureFocus(); void Fiber2DfadingEFX(); void FiberSlicingThickness2D(); void FiberSlicingUpdateLabel(int); + void LineWidthChanged(); void SetInteractor(); - void PFWidth(int); - void PFColor(); - - void LineWidthChanged(); - - void GenerateTdi(); void Welcome(); protected: virtual void NodeRemoved(const mitk::DataNode* node); /// \brief called by QmitkFunctionality when DataManager's selection has changed virtual void OnSelectionChanged( std::vector nodes ); virtual void NodeAdded(const mitk::DataNode *node); void SetFiberBundleCustomColor(const itk::EventObject& /*e*/); void SetFiberBundleOpacity(const itk::EventObject& /*e*/); bool IsPlaneRotated(); void SliceRotation(const itk::EventObject&); Ui::QmitkControlVisualizationPropertiesViewControls* m_Controls; QmitkStdMultiWidget* m_MultiWidget; berry::ISelectionListener::Pointer m_SelListener; berry::IStructuredSelection::ConstPointer m_CurrentSelection; - bool m_FoundSingleOdfImage; - bool m_IsInitialized; mitk::DataNode::Pointer m_NodeUsedForOdfVisualization; QIcon* m_IconTexOFF; QIcon* m_IconTexON; QIcon* m_IconGlyOFF_T; QIcon* m_IconGlyON_T; QIcon* m_IconGlyOFF_C; QIcon* m_IconGlyON_C; QIcon* m_IconGlyOFF_S; QIcon* m_IconGlyON_S; bool m_TexIsOn; bool m_GlyIsOn_T; bool m_GlyIsOn_C; bool m_GlyIsOn_S; int currentThickSlicesMode; QLabel* m_TSLabel; QMenu* m_MyMenu; // for planarfigure and bundle handling: - mitk::DataNode* m_SelectedNode; + mitk::DataNode::Pointer m_SelectedNode; mitk::DataNode* m_CurrentPickingNode; unsigned long m_SlicesRotationObserverTag1; unsigned long m_SlicesRotationObserverTag2; unsigned long m_FiberBundleObserverTag; unsigned long m_FiberBundleObserveOpacityTag; mitk::ColorProperty::Pointer m_Color; mitk::FloatProperty::Pointer m_Opacity; }; #endif // _QMITKControlVisualizationPropertiesView_H_INCLUDED diff --git a/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesViewControls.ui b/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesViewControls.ui index 01ef2755f9..b9366d9c7d 100644 --- a/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesViewControls.ui +++ b/Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkControlVisualizationPropertiesViewControls.ui @@ -1,965 +1,702 @@ QmitkControlVisualizationPropertiesViewControls 0 0 567 619 0 100 0 0 QmitkTemplate 0 0 0 0 QFrame::NoFrame QFrame::Raised 0 0 0 0 0 0 QFrame::NoFrame QFrame::Raised 0 0 0 0 - - - - Reinit view - - - - - - - - - - - - false - - - false - - - - - - - Texture interpolation ON - - - - - - - - - - - - true - - - false - - - - - - - Toggle visibility of ODF glyphs (axial) - - - - - - - - - - - - - :/QmitkDiffusionImaging/glyphsoff_T.png - :/QmitkDiffusionImaging/glyphson_T.png:/QmitkDiffusionImaging/glyphsoff_T.png - - - true - - - false - - - - - - - Toggle visibility of ODF glyphs (sagittal) - - - - - - - - - - - - - :/QmitkDiffusionImaging/glyphsoff_S.png - :/QmitkDiffusionImaging/glyphson_S.png:/QmitkDiffusionImaging/glyphsoff_S.png - - - true - - - false - - - - - - - Toggle visibility of ODF glyphs (coronal) - - - - - - - - - - - - - :/QmitkDiffusionImaging/glyphsoff_C.png - :/QmitkDiffusionImaging/glyphson_C.png:/QmitkDiffusionImaging/glyphsoff_C.png - - - true - - - false - - - Multislice Projection MIP QToolButton::MenuButtonPopup Qt::NoArrow - - - - Channel - - - - - - - 300 - - - Qt::Horizontal - - - - - - QFrame::NoFrame QFrame::Plain 0 0 0 0 - - - Qt::Horizontal + + + Toggle visibility of ODF glyphs (axial) - - - 20 - 20 - + + - + + + + + + + + + :/QmitkDiffusionImaging/glyphsoff_T.png + :/QmitkDiffusionImaging/glyphson_T.png:/QmitkDiffusionImaging/glyphsoff_T.png + + + true + + + false + + + + + + + Toggle visibility of ODF glyphs (sagittal) + + + + + + + + + + + + + :/QmitkDiffusionImaging/glyphsoff_S.png + :/QmitkDiffusionImaging/glyphson_S.png:/QmitkDiffusionImaging/glyphsoff_S.png + + + true + + + false + + + + + + + Toggle visibility of ODF glyphs (coronal) + + + + + + + + + + + + + :/QmitkDiffusionImaging/glyphsoff_C.png + :/QmitkDiffusionImaging/glyphson_C.png:/QmitkDiffusionImaging/glyphsoff_C.png + + + true + + + false + + #Glyphs 9999 + + + + Qt::Horizontal + + + + 20 + 20 + + + + - - - QFrame::NoFrame - - - QFrame::Plain - - - - 0 - - - 0 - - - 0 - - - 0 - - - - - Opacity - - - - - - - 100 - - - Qt::Horizontal - - - - - - - - 80 - 0 - - - - 0.0 : 0.0 - - - - - - - - + QFrame::NoFrame QFrame::Raised 0 0 0 0 0 QFrame::NoFrame QFrame::Raised 0 0 0 0 6 0 QFrame::NoFrame QFrame::Plain 0 0 0 0 false None By GFA By ASR * Additional scaling factor + + 3 + + + 999999999.000000000000000 + + + 0.100000000000000 + + + 1.000000000000000 + Scaling QFrame::NoFrame QFrame::Plain 0 0 0 0 0 ODF normalization false Min-Max Max None - - - - QFrame::NoFrame - - - QFrame::Raised - - - - 0 - - - 0 - - - 0 - - - 0 - - - - - Param1 - - - - - - - 9999.989999999999782 - - - - - - - Param2 - - - - - - - 9999.989999999999782 - - - - - - QFrame::NoFrame QFrame::Raised 0 0 0 0 QFrame::NoFrame QFrame::Raised 0 0 0 0 - - - - Uniform Color for Bundle - - - - - - Reset to Default Coloring + + + :/QmitkDiffusionImaging/reset.png:/QmitkDiffusionImaging/reset.png + Position Crosshair by 3D-Click + + + :/QmitkDiffusionImaging/crosshair.png:/QmitkDiffusionImaging/crosshair.png + true false - - - - Generate Tract Density Image - - - - - - - - - 2D Fiberfading on/off Qt::Horizontal 40 20 QFrame::NoFrame QFrame::Raised 0 0 0 0 2D Clipping 100 10 10 10 Qt::Horizontal 90 0 10000 16777215 Range QFrame::NoFrame QFrame::Raised 0 0 0 0 Line Width 1 10 - - - - QFrame::NoFrame - - - QFrame::Raised - - - - 0 - - - 0 - - - 0 - - - 0 - - - - - Focus Planar Figure - - - - - - - - - - - 0 - 0 - - - - Select ROI color. - - - - - - - - - - Adjust 2D line width. - - - 1 - - - 100 - - - 20 - - - Qt::Horizontal - - - - - - - - 80 - 0 - - - - Width - - - Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter - - - - - - 50 false false <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'Ubuntu'; font-size:11pt; font-weight:400; font-style:normal;"> -<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" color:#ff0000;"> ODF Visualisation not possible in rotated planes. </span></p> -<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" color:#ff0000;"> Use 'Reinit' on the image node to reset. </span></p></body></html> +<p align="center" style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" color:#ff0000;">One or more slices are rotated. ODF Visualisation is not possible in rotated planes. Use 'Reinit' on the image node to reset. </span></p></body></html> Qt::AutoText + + true + Qt::Vertical 20 40 - - - ctkRangeSlider - QWidget -
ctkRangeSlider.h
- - QmitkDataStorageComboBox.h