diff --git a/Core/Code/DataManagement/mitkVector.h b/Core/Code/DataManagement/mitkVector.h index 598c2a5411..95a3d66bea 100644 --- a/Core/Code/DataManagement/mitkVector.h +++ b/Core/Code/DataManagement/mitkVector.h @@ -1,448 +1,448 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef MITKVECTOR_H_HEADER_INCLUDED_C1EBD0AD #define MITKVECTOR_H_HEADER_INCLUDED_C1EBD0AD // this is needed for memcopy in ITK // can be removed when fixed in ITK #include #include #include #include #include #include #include #include #include #include #ifndef DOXYGEN_SKIP namespace mitk { typedef float ScalarType; typedef itk::Matrix Matrix3D; typedef itk::Matrix Matrix4D; typedef vnl_matrix_fixed VnlMatrix3D; typedef itk::Transform Transform3D; typedef vnl_vector VnlVector; typedef vnl_vector_ref VnlVectorRef; typedef itk::Point Point2D; typedef itk::Point Point3D; typedef itk::Point Point4D; typedef itk::Point Point2I; typedef itk::Point Point3I; typedef itk::Point Point4I; typedef itk::Vector Vector2D; typedef itk::Vector Vector3D; typedef itk::Index<3> Index3D; typedef itk::ContinuousIndex ContinuousIndex3D; typedef vnl_quaternion Quaternion; //##Documentation //##@brief enumeration of the type a point can be enum PointSpecificationType { PTUNDEFINED = 0, PTSTART, PTCORNER, PTEDGE, PTEND }; typedef itk::NumericTraits ScalarTypeNumericTraits; MITK_CORE_EXPORT extern const ScalarType eps; MITK_CORE_EXPORT extern const ScalarType sqrteps; MITK_CORE_EXPORT extern const double large; template class VectorTraits { public: typedef T ValueType; }; template <> class VectorTraits { public: typedef ScalarType ValueType; }; template<> class VectorTraits { public: typedef double ValueType; }; template<> class VectorTraits< itk::Index<5> > { public: typedef itk::Index<5>::IndexValueType ValueType; }; template<> class VectorTraits< itk::Index<3> > { public: typedef itk::Index<3>::IndexValueType ValueType; }; template<> class VectorTraits< long int [3]> { public: typedef long int ValueType; }; template<> class VectorTraits< float [3]> { public: typedef float ValueType; }; template<> class VectorTraits< double [3]> { public: typedef double ValueType; }; template<> class VectorTraits< vnl_vector_fixed > { public: typedef ScalarType ValueType; }; template<> class VectorTraits< long unsigned int[3]> { public: typedef long unsigned int ValueType; }; template<> class VectorTraits< unsigned int *> { public: typedef unsigned int ValueType; }; template<> class VectorTraits< ScalarType[4] > { public: typedef ScalarType ValueType; }; template<> class VectorTraits< itk::Vector > { public: typedef float ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef float ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef float ValueType; }; template<> class VectorTraits< itk::Vector > { public: typedef double ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef double ValueType; }; template<> class VectorTraits< itk::Vector > { public: typedef int ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef int ValueType; }; template inline void itk2vtk(const Tin& in, Tout& out) { out[0]=(typename VectorTraits::ValueType)(in[0]); out[1]=(typename VectorTraits::ValueType)(in[1]); out[2]=(typename VectorTraits::ValueType)(in[2]); } template inline void vtk2itk(const Tin& in, Tout& out) { out[0]=(typename VectorTraits::ValueType)(in[0]); out[1]=(typename VectorTraits::ValueType)(in[1]); out[2]=(typename VectorTraits::ValueType)(in[2]); } template inline void FillVector3D(Tout& out, ScalarType x, ScalarType y, ScalarType z) { out[0] = (typename VectorTraits::ValueType)x; out[1] = (typename VectorTraits::ValueType)y; out[2] = (typename VectorTraits::ValueType)z; } template inline void FillVector4D(Tout& out, ScalarType x, ScalarType y, ScalarType z, ScalarType t) { out[0] = (typename VectorTraits::ValueType)x; out[1] = (typename VectorTraits::ValueType)y; out[2] = (typename VectorTraits::ValueType)z; out[3] = (typename VectorTraits::ValueType)t; } template inline void vnl2vtk(const vnl_vector& in, Tout *out) { unsigned int i; for(i=0; i inline void vtk2vnl(const Tin *in, vnl_vector& out) { unsigned int i; for(i=0; i inline void vtk2vnlref(const Tin *in, vnl_vector_ref& out) { unsigned int i; for(i=0; i inline void vnl2vtk(const vnl_vector_fixed& in, Tout *out) { unsigned int i; for(i=0; i inline void vtk2vnl(const Tin *in, vnl_vector_fixed& out) { unsigned int i; for(i=0; i itk::Vector operator+(const itk::Vector &vector, const itk::Point &point) { itk::Vector sub; for( unsigned int i=0; i inline itk::Vector& operator+=(itk::Vector &vector, const itk::Point &point) { for( unsigned int i=0; i itk::Vector operator-(const itk::Vector &vector, const itk::Point &point) { itk::Vector sub; for( unsigned int i=0; i inline itk::Vector& operator-=(itk::Vector &vector, const itk::Point &point) { for( unsigned int i=0; i inline bool MatrixEqualRMS(const vnl_matrix_fixed& matrix1,const vnl_matrix_fixed& matrix2,mitk::ScalarType epsilon=mitk::eps) { if ( (matrix1.rows() == matrix2.rows()) && (matrix1.cols() == matrix2.cols()) ) { vnl_matrix_fixed differenceMatrix = matrix1-matrix2; if (differenceMatrix.rms() inline bool MatrixEqualRMS(const itk::Matrix& matrix1,const itk::Matrix& matrix2,mitk::ScalarType epsilon=mitk::eps) { return mitk::MatrixEqualRMS(matrix1.GetVnlMatrix(),matrix2.GetVnlMatrix(),epsilon); } /*! \brief Check for element-wise matrix equality with a user defined accuracy. \param matrix1 first vnl matrix \param matrix2 second vnl matrix \epsilon user defined accuracy bounds */ template inline bool MatrixEqualElementWise(const vnl_matrix_fixed& matrix1,const vnl_matrix_fixed& matrix2,mitk::ScalarType epsilon=mitk::eps) { if ( (matrix1.rows() == matrix2.rows()) && (matrix1.cols() == matrix2.cols()) ) { for( unsigned int r=0; repsilon) { return false; } } } return true; } else { return false; } } /*! \brief Check for element-wise matrix equality with a user defined accuracy. \param matrix1 first itk matrix \param matrix2 second itk matrix \epsilon user defined accuracy bounds */ template inline bool MatrixEqualElementWise(const itk::Matrix& matrix1,const itk::Matrix& matrix2,mitk::ScalarType epsilon=mitk::eps) { return mitk::MatrixEqualElementWise(matrix1.GetVnlMatrix(),matrix2.GetVnlMatrix(),epsilon); } template inline bool Equal(const itk::Vector& vector1, const itk::Vector& vector2, TCoordRep eps=mitk::eps) { typename itk::Vector::VectorType diff = vector1-vector2; for (unsigned int i=0; ieps || diff[i]<-eps) return false; return true; } template inline bool Equal(const itk::Point& vector1, const itk::Point& vector2, TCoordRep eps=mitk::eps) { typename itk::Point::VectorType diff = vector1-vector2; for (unsigned int i=0; ieps || diff[i]<-eps) return false; return true; } inline bool Equal(const mitk::VnlVector& vector1, const mitk::VnlVector& vector2, ScalarType eps=mitk::eps) { mitk::VnlVector diff = vector1-vector2; for (unsigned int i=0; ieps || diff[i]<-eps) return false; return true; } inline bool Equal(double scalar1, double scalar2, ScalarType eps=mitk::eps) { return fabs(scalar1-scalar2) < eps; } template inline bool Equal(const vnl_vector_fixed & vector1, const vnl_vector_fixed& vector2, TCoordRep eps=mitk::eps) { vnl_vector_fixed diff = vector1-vector2; - return diff.squared_magnitude() < mitk::eps; + return diff.squared_magnitude() < eps; } template inline void TransferMatrix(const itk::Matrix& in, itk::Matrix& out) { for (unsigned int i = 0; i < in.RowDimensions; ++i) for (unsigned int j = 0; j < in.ColumnDimensions; ++j) out[i][j] = in[i][j]; } } // namespace mitk #endif //DOXYGEN_SKIP /* * This part of the code has been shifted here to avoid compiler clashes * caused by including before the declaration of * the Equal() methods above. This problem occurs when using MSVC and is * probably related to a compiler bug. */ #include namespace mitk { typedef itk::AffineGeometryFrame::TransformType AffineTransform3D; } #define mitkSetConstReferenceMacro(name,type) \ virtual void Set##name (const type & _arg) \ { \ itkDebugMacro("setting " << #name " to " << _arg ); \ if (this->m_##name != _arg) \ { \ this->m_##name = _arg; \ this->Modified(); \ } \ } #define mitkSetVectorMacro(name,type) \ mitkSetConstReferenceMacro(name,type) #define mitkGetVectorMacro(name,type) \ itkGetConstReferenceMacro(name,type) #endif /* MITKVECTOR_H_HEADER_INCLUDED_C1EBD0AD */