diff --git a/Plugins/org.mitk.gui.qt.multilabelsegmentation/documentation/UserManual/QmitkMultiLabelSegmentationUtilities.dox b/Plugins/org.mitk.gui.qt.multilabelsegmentation/documentation/UserManual/QmitkMultiLabelSegmentationUtilities.dox index 4d3bd6539f..3d0e2a4fc7 100644 --- a/Plugins/org.mitk.gui.qt.multilabelsegmentation/documentation/UserManual/QmitkMultiLabelSegmentationUtilities.dox +++ b/Plugins/org.mitk.gui.qt.multilabelsegmentation/documentation/UserManual/QmitkMultiLabelSegmentationUtilities.dox @@ -1,82 +1,82 @@ /** \page org_mitk_views_multilabelsegmentationutilities The Multilabel Segmentation Utilities View \imageMacro{multilabelsegmentation_utilities.svg,"Icon of the Multilabel Segmentation Utilities View",5.00} \imageMacro{QmitkMultiLabelSegmentationUtilities_Overview.png, "The Multilabel Segmentation Utilities View",16.00} \tableofcontents \section org_mitk_views_multilabelSegmentationUtilitiesOverview Overview The Multilabel Segmentation Utilities View allows to postprocess existing segmentations. Currently five different operations exist: \section org_mitk_views_multilabelSegmentationUtilitiesDataSelection Data Selection All postprocessing operations provide one or more selection widgets, which allow to select the data for the operation. \section org_mitk_views_multilabelSegmentationUtilitiesBooleanOperations Boolean operations Boolean operations allows to perform the following fundamental operations on two segmentations: The selected segmentations must have the same geometry (size, spacing, ...) in order for the operations to work correctly. The result will be stored in a new data node as a child node of the first selected segmentation. \imageMacro{QmitkMultiLabelSegmentationUtilities_BooleanOperations.png,"Boolean operations",6.00} \section org_mitk_views_multilabelSegmentationUtilitiesMorphologicalOperations Morphological operations Morphological operations are applied to a single segmentation image. Based on a given structuring element the underlying segmentation will be modfied. The plugin provides a ball and a cross as structuring elements. The follow operations are available: \imageMacro{QmitkMultiLabelSegmentationUtilities_MorphologicalOperations.png,"Morphological operations",6.00} \section org_mitk_views_multilabelSegmentationUtilitiesSurfaceToImage Surface to image Surface to image allows to create a segmentation out of a given surface. The operation requires a surface and a reference image. The created segmentation image will have the same geometrical properties like the reference image (dimension, size and Geometry3D). Depending on the selected mode ("make output binary" or "overwrite background") the result will be a simple image or a binary image. \imageMacro{QmitkMultiLabelSegmentationUtilities_SurfaceToImage.png,"Surface to image",6.00} \section org_mitk_views_multilabelSegmentationUtilitiesImageMasking Image masking Image masking allows to mask an image with either an existing segmentation or a surface. The operation requires an image and a binary image mask or a surface. The result will be an image containing only the pixels that are covered by the respective mask. Depending on the selected mode ("make output binary" or "overwrite foreground" / "overwrite background") the result will be a simple image or a binary image. \imageMacro{QmitkMultiLabelSegmentationUtilities_ImageMasking.png,"Image masking",6.00} \section org_mitk_views_multilabelSegmentationUtilitiesConvertToMultiLabel Convert to Multilabel Convert to multilabel allows to interpret the pixel values of a given image as label IDs and convert the image content into the respective MultiLabel image. The new segmentation will contain one layer with as many labels as the original image contains different pixel values. \imageMacro{QmitkMultiLabelSegmentationUtilities_ConvertToMultilabel.png,"Convert to Multilabel",6.00} **/