diff --git a/CMake/mitkFunctionCreatePlugin.cmake b/CMake/mitkFunctionCreatePlugin.cmake
index 8044c5b978..4a871ce61e 100644
--- a/CMake/mitkFunctionCreatePlugin.cmake
+++ b/CMake/mitkFunctionCreatePlugin.cmake
@@ -1,342 +1,338 @@
 
 #! \brief Creates a MITK CTK plugin.
 #!
 #! This function should be called from the plugins CMakeLists.txt file.
 #! The target name is available after the macro call as ${PLUGIN_TARGET}
 #! to add additional libraries in your CMakeLists.txt. Include paths and link
 #! libraries are set depending on the value of the Required-Plugins header
 #! in your manifest_headers.cmake file.
 #!
 #! This function internally calls ctkMacroBuildPlugin() and adds support
 #! for Qt Help files and installers.
 #!
 #! Options:
 #! \param TEST_PLUGIN Mark this plug-in as a testing plug-in.
 #! \param NO_INSTALL  Don't install this plug-in.
 #!
 #! Parameters:
 #!
 #! \param EXPORT_DIRECTIVE (required) The export directive to use in the generated
 #!        <plugin_target>_Exports.h file.
 #!
 #! Multi-value parameters (all optional):
 #!
 #! \param EXPORTED_INCLUDE_SUFFIXES A list of sub-directories which should
 #!        be added to the current source directory. The resulting directories
 #!        will be available in the set of include directories of depending plug-ins.
 #! \param MODULE_DEPENDS (optional) A list of Modules this plug-in depends on.
 #! \param PACKAGE_DEPENDS (optional) A list of external packages this plug-in depends on.
 #! \param TARGET_DEPENDS (optional) A list of CMake targets this plug-in depends on.
 #! \param DOXYGEN_TAGFILES (optional) Which external tag files should be available for the plugin documentation
 #! \param MOC_OPTIONS (optional) Additional options to pass to the Qt MOC compiler
 #! \param WARNINGS_NO_ERRORS (optional) Do not handle compiler warnings as errors
 function(mitk_create_plugin)
 
   # options
   set(arg_options
     TEST_PLUGIN # Mark this plug-in as a testing plug-in
     NO_INSTALL  # Don't install this plug-in
     WARNINGS_NO_ERRORS
   )
 
   # single value arguments
   set(arg_single
     EXPORT_DIRECTIVE # (required) TODO: could be generated via CMake as it is done for MITK modules already
   )
 
   # multiple value arguments
   set(arg_multiple
     EXPORTED_INCLUDE_SUFFIXES # (optional) additional public include directories
     MODULE_DEPENDS            # (optional)
     PACKAGE_DEPENDS
     TARGET_DEPENDS
     DOXYGEN_TAGFILES
     MOC_OPTIONS
     SUBPROJECTS # deprecated
   )
 
   cmake_parse_arguments(_PLUGIN "${arg_options}" "${arg_single}" "${arg_multiple}" ${ARGN})
 
   if(_PLUGIN_TEST_PLUGIN)
     set(_PLUGIN_NO_INSTALL 1)
     set(is_test_plugin "TEST_PLUGIN")
   else()
     set(is_test_plugin)
   endif()
 
   set(_PLUGIN_MOC_OPTIONS "-DBOOST_NO_TEMPLATE_PARTIAL_SPECIALIZATION -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED ${_PLUGIN_MOC_OPTIONS}")
 
   set(PLUGIN_TARGET ${PROJECT_NAME})
 
   mitk_check_module_dependencies(MODULES ${_PLUGIN_MODULE_DEPENDS}
                                  PACKAGES ${_PLUGIN_PACKAGE_DEPENDS}
                                  MISSING_DEPENDENCIES_VAR _missing_deps
                                  MODULE_DEPENDENCIES_VAR _module_deps
                                  PACKAGE_DEPENDENCIES_VAR _package_deps)
 
   if(_missing_deps)
     if(NOT MITK_BUILD_ALL_PLUGINS)
       message(SEND_ERROR "${PROJECT_NAME} is missing requirements and won't be built. Missing: ${_missing_deps}")
     else()
       message(STATUS "${PROJECT_NAME} is missing requirements and won't be built. Missing: ${_missing_deps}")
     endif()
     return()
   endif()
 
   foreach(_module_dep ${_PLUGIN_MODULE_DEPENDS})
     if(TARGET ${_module_dep})
       get_target_property(AUTLOAD_DEP ${_module_dep} MITK_AUTOLOAD_DIRECTORY)
       if (AUTLOAD_DEP)
         message(SEND_ERROR "Plugin \"${PROJECT_NAME}\" has an invalid dependency on autoload module \"${_module_dep}\". Check MITK_CREATE_PLUGIN usage for \"${PROJECT_NAME}\".")
       endif()
     endif()
   endforeach()
 
   # -------------- All dependencies are resolved ------------------
 
   message(STATUS "Creating CTK plugin ${PROJECT_NAME}")
 
   include(files.cmake)
 
   set(_PLUGIN_CPP_FILES ${CPP_FILES})
   set(_PLUGIN_MOC_H_FILES ${MOC_H_FILES})
   set(_PLUGIN_UI_FILES ${UI_FILES})
   set(_PLUGIN_CACHED_RESOURCE_FILES ${CACHED_RESOURCE_FILES})
   set(_PLUGIN_TRANSLATION_FILES ${TRANSLATION_FILES})
   set(_PLUGIN_QRC_FILES ${QRC_FILES})
   set(_PLUGIN_H_FILES ${H_FILES})
   set(_PLUGIN_TXX_FILES ${TXX_FILES})
   set(_PLUGIN_DOX_FILES ${DOX_FILES})
   set(_PLUGIN_CMAKE_FILES ${CMAKE_FILES} files.cmake)
   set(_PLUGIN_FILE_DEPENDENCIES ${FILE_DEPENDENCIES})
 
   if(CTK_PLUGINS_OUTPUT_DIR)
     set(_output_dir "${CTK_PLUGINS_OUTPUT_DIR}")
   else()
     set(_output_dir "")
   endif()
 
   # Compute the plugin dependencies
   ctkFunctionGetTargetLibraries(_PLUGIN_target_libraries "")
 
   #------------------------------------------------------------#
   #------------------ Qt Help support -------------------------#
 
   set(PLUGIN_GENERATED_QCH_FILES )
   if(BLUEBERRY_USE_QT_HELP AND
       EXISTS "${CMAKE_CURRENT_SOURCE_DIR}/documentation/UserManual")
     set(PLUGIN_DOXYGEN_INPUT_DIR "${CMAKE_CURRENT_SOURCE_DIR}/documentation/UserManual")
     set(PLUGIN_DOXYGEN_OUTPUT_DIR "${CMAKE_CURRENT_BINARY_DIR}/documentation/UserManual")
 
     # Create a list of Doxygen tag files from the plug-in dependencies
     set(PLUGIN_DOXYGEN_TAGFILES)
     foreach(_dep_target ${_PLUGIN_target_libraries})
       string(REPLACE _ . _dep ${_dep_target})
 
       get_target_property(_is_imported ${_dep_target} IMPORTED)
       if(_is_imported)
         get_target_property(_import_loc_debug ${_dep_target} IMPORTED_LOCATION_DEBUG)
         get_target_property(_import_loc_release ${_dep_target} IMPORTED_LOCATION_RELEASE)
         # There is not necessarily a debug and release build
         if(_import_loc_release)
           set(_import_loc ${_import_loc_release})
         else()
           set(_import_loc ${_import_loc_debug})
         endif()
         get_filename_component(_target_filename "${_import_loc}" NAME)
         # on windows there might be a Debug or Release subdirectory
         string(REGEX REPLACE "/bin/plugins/(Debug/|Release/)?${_target_filename}" "/Plugins/${_dep}/documentation/UserManual" plugin_tag_dir "${_import_loc}" )
       else()
         set(plugin_tag_dir "${CMAKE_BINARY_DIR}/Plugins/${_dep}/documentation/UserManual")
       endif()
 
       set(_tag_file "${plugin_tag_dir}/${_dep_target}.tag")
       if(EXISTS ${_tag_file})
         set(PLUGIN_DOXYGEN_TAGFILES "${PLUGIN_DOXYGEN_TAGFILES} \"${_tag_file}=qthelp://${_dep}/bundle/\"")
       endif()
     endforeach()
     if(_PLUGIN_DOXYGEN_TAGFILES)
       set(PLUGIN_DOXYGEN_TAGFILES "${PLUGIN_DOXYGEN_TAGFILES} ${_PLUGIN_DOXYGEN_TAGFILES}")
     endif()
     #message("PLUGIN_DOXYGEN_TAGFILES: ${PLUGIN_DOXYGEN_TAGFILES}")
 
     _FUNCTION_CREATE_CTK_QT_COMPRESSED_HELP(PLUGIN_GENERATED_QCH_FILES)
     list(APPEND _PLUGIN_CACHED_RESOURCE_FILES ${PLUGIN_GENERATED_QCH_FILES})
   endif()
 
   #------------------------------------------------------------#
   #------------------ Create Plug-in --------------------------#
 
   mitkFunctionOrganizeSources(
     SOURCE ${_PLUGIN_CPP_FILES}
     HEADER ${_PLUGIN_H_FILES}
     TXX ${_PLUGIN_TXX_FILES}
     DOC ${_PLUGIN_DOX_FILES}
     UI ${_PLUGIN_UI_FILES}
     QRC ${_PLUGIN_QRC_FILES} ${_PLUGIN_CACHED_RESOURCE_FILES}
     META ${_PLUGIN_META_FILES}
     MOC ${MY_MOC_CPP}
     GEN_UI ${MY_UI_CPP}
     GEN_QRC ${MY_QRC_SRCS}
   )
 
   ctkMacroBuildPlugin(
     NAME ${PLUGIN_TARGET}
     EXPORT_DIRECTIVE ${_PLUGIN_EXPORT_DIRECTIVE}
     SRCS ${_PLUGIN_CPP_FILES} ${_PLUGIN_H_FILES} ${CORRESPONDING__H_FILES} ${GLOBBED__H_FILES}
     MOC_SRCS ${_PLUGIN_MOC_H_FILES}
     MOC_OPTIONS ${_PLUGIN_MOC_OPTIONS}
     UI_FORMS ${_PLUGIN_UI_FILES}
     EXPORTED_INCLUDE_SUFFIXES ${_PLUGIN_EXPORTED_INCLUDE_SUFFIXES}
     RESOURCES ${_PLUGIN_QRC_FILES}
     TARGET_LIBRARIES ${_PLUGIN_target_libraries}
     CACHED_RESOURCEFILES ${_PLUGIN_CACHED_RESOURCE_FILES}
     TRANSLATIONS ${_PLUGIN_TRANSLATION_FILES}
     OUTPUT_DIR ${_output_dir}
     NO_INSTALL # we install the plug-in ourselves
     ${is_test_plugin}
   )
 
   mitk_use_modules(TARGET ${PLUGIN_TARGET}
     MODULES ${_PLUGIN_MODULE_DEPENDS}
     PACKAGES ${_PLUGIN_PACKAGE_DEPENDS}
   )
 
   if(_PLUGIN_TARGET_DEPENDS)
     target_link_libraries(${PLUGIN_TARGET} ${_PLUGIN_TARGET_DEPENDS})
   endif()
 
   set_property(TARGET ${PLUGIN_TARGET} APPEND PROPERTY COMPILE_DEFINITIONS US_MODULE_NAME=${PLUGIN_TARGET})
   set_property(TARGET ${PLUGIN_TARGET} PROPERTY US_MODULE_NAME ${PLUGIN_TARGET})
 
   if(NOT CMAKE_CURRENT_SOURCE_DIR MATCHES "^${CMAKE_SOURCE_DIR}/.*")
     foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
       if("${CMAKE_CURRENT_SOURCE_DIR}/" MATCHES "^${MITK_EXTENSION_DIR}/.*")
         get_filename_component(MITK_EXTENSION_ROOT_FOLDER "${MITK_EXTENSION_DIR}" NAME)
         set_property(TARGET ${PLUGIN_TARGET} PROPERTY FOLDER "${MITK_EXTENSION_ROOT_FOLDER}/Plugins")
         break()
       endif()
     endforeach()
   else()
     set_property(TARGET ${PLUGIN_TARGET} PROPERTY FOLDER "${MITK_ROOT_FOLDER}/Plugins")
   endif()
 
   set(plugin_c_flags)
   set(plugin_cxx_flags)
 
   if(NOT _PLUGIN_WARNINGS_NO_ERRORS)
     if(MSVC_VERSION)
       mitkFunctionCheckCAndCXXCompilerFlags("/WX" plugin_c_flags plugin_cxx_flags)
     else()
       mitkFunctionCheckCAndCXXCompilerFlags(-Werror plugin_c_flags plugin_cxx_flags)
       mitkFunctionCheckCAndCXXCompilerFlags("-Wno-error=c++0x-static-nonintegral-init" plugin_c_flags plugin_cxx_flags)
       mitkFunctionCheckCAndCXXCompilerFlags("-Wno-error=static-member-init" plugin_c_flags plugin_cxx_flags)
       mitkFunctionCheckCAndCXXCompilerFlags("-Wno-error=unknown-warning" plugin_c_flags plugin_cxx_flags)
       mitkFunctionCheckCAndCXXCompilerFlags("-Wno-error=gnu" plugin_c_flags plugin_cxx_flags)
       mitkFunctionCheckCAndCXXCompilerFlags("-Wno-error=cast-function-type" plugin_c_flags plugin_cxx_flags)
       mitkFunctionCheckCAndCXXCompilerFlags("-Wno-error=inconsistent-missing-override" plugin_c_flags plugin_cxx_flags)
       mitkFunctionCheckCAndCXXCompilerFlags("-Wno-error=deprecated-declarations" plugin_c_flags plugin_cxx_flags)
     endif()
   endif()
 
   if(plugin_c_flags)
     string(REPLACE " " ";" plugin_c_flags "${plugin_c_flags}")
     target_compile_options(${PLUGIN_TARGET} PRIVATE ${plugin_c_flags})
   endif()
 
   if(plugin_cxx_flags)
     string(REPLACE " " ";" plugin_cxx_flags "${plugin_cxx_flags}")
     target_compile_options(${PLUGIN_TARGET} PRIVATE ${plugin_cxx_flags})
   endif()
 
   if(_PLUGIN_TEST_PLUGIN)
     find_package(CppUnit REQUIRED)
     target_include_directories(${PLUGIN_TARGET} PRIVATE ${CppUnit_INCLUDE_DIRS})
     target_link_libraries(${PLUGIN_TARGET} PRIVATE ${CppUnit_LIBRARIES})
   endif()
 
   if(TARGET MitkLog)
     target_link_libraries(${PLUGIN_TARGET} PRIVATE MitkLog)
   endif()
 
   set(_PLUGIN_META_FILES "${CMAKE_CURRENT_SOURCE_DIR}/manifest_headers.cmake")
   if(EXISTS "${CMAKE_CURRENT_SOURCE_DIR}/plugin.xml")
     list(APPEND _PLUGIN_META_FILES "${CMAKE_CURRENT_SOURCE_DIR}/plugin.xml")
   endif()
 
   set(PLUGIN_TARGET ${PLUGIN_TARGET} PARENT_SCOPE)
 
   #------------------------------------------------------------#
   #------------------ Installer support -----------------------#
   if(NOT _PLUGIN_NO_INSTALL)
     set(install_directories "")
     if(NOT MACOSX_BUNDLE_NAMES)
       set(install_directories bin/plugins)
     else(NOT MACOSX_BUNDLE_NAMES)
       foreach(bundle_name ${MACOSX_BUNDLE_NAMES})
         list(APPEND install_directories ${bundle_name}.app/Contents/MacOS/plugins)
       endforeach(bundle_name)
     endif(NOT MACOSX_BUNDLE_NAMES)
 
     foreach(install_subdir ${install_directories})
 
       mitkFunctionInstallCTKPlugin(TARGETS ${PLUGIN_TARGET}
                                    DESTINATION ${install_subdir})
 
     endforeach()
 
     set(_autoload_targets )
     foreach(_dependency ${_module_deps})
       get_target_property(_dep_autoloads ${_dependency} MITK_AUTOLOAD_TARGETS)
       if (_dep_autoloads)
         list(APPEND _autoload_targets ${_dep_autoloads})
       endif()
     endforeach()
 
     # The MITK_AUTOLOAD_TARGETS property is used in the mitkFunctionInstallAutoLoadModules
     # macro which expects a list of plug-in targets.
     if (_autoload_targets)
       list(REMOVE_DUPLICATES _autoload_targets)
       set_target_properties(${PLUGIN_TARGET} PROPERTIES MITK_AUTOLOAD_TARGETS "${_autoload_targets}")
     endif()
   endif()
 
 endfunction()
 
 
 function(_FUNCTION_CREATE_CTK_QT_COMPRESSED_HELP qch_file)
 
   set(_manifest_path "${CMAKE_CURRENT_SOURCE_DIR}/manifest_headers.cmake")
   if(NOT EXISTS ${_manifest_path})
     message(FATAL_ERROR "${_manifest_path} not found")
   endif()
 
   include(${_manifest_path})
   string(REPLACE "_" "." Plugin-SymbolicName "${PLUGIN_TARGET}")
 
   configure_file(${MITK_SOURCE_DIR}/Documentation/doxygen_plugin_manual.conf.in
                  ${PLUGIN_DOXYGEN_OUTPUT_DIR}/doxygen.conf
                  )
 
   set(_generated_qhp_file "${PLUGIN_DOXYGEN_OUTPUT_DIR}/html/index.qhp")
   set(${qch_file} "${CMAKE_CURRENT_BINARY_DIR}/resources/${PLUGIN_TARGET}.qch")
 
   file(GLOB _file_dependencies "${PLUGIN_DOXYGEN_INPUT_DIR}/*")
 
   add_custom_command(OUTPUT ${${qch_file}}
                      # Generate a Qt help project (index.qhp) with doxygen
                      COMMAND ${DOXYGEN_EXECUTABLE} ${PLUGIN_DOXYGEN_OUTPUT_DIR}/doxygen.conf
                      # Generate the final Qt compressed help file (.qch)
                      COMMAND ${QT_HELPGENERATOR_EXECUTABLE} ${_generated_qhp_file} -o ${${qch_file}}
                      DEPENDS ${PLUGIN_DOXYGEN_OUTPUT_DIR}/doxygen.conf ${_file_dependencies}
                      )
 
   #set_source_files_properties(${qch_file} PROPERTIES GENERATED 1)
 
   set(${qch_file} ${${qch_file}} PARENT_SCOPE)
 
 endfunction()
-
-function(MACRO_CREATE_MITK_CTK_PLUGIN)
-  message(SEND_ERROR "The function MACRO_CREATE_MITK_CTK_PLUGIN was renamed to mitk_create_plugin in MITK 2015.05.")
-endfunction()
diff --git a/CMake/mitkMacroCreateCTKPlugin.cmake b/CMake/mitkMacroCreateCTKPlugin.cmake
deleted file mode 100644
index c9e80e7bba..0000000000
--- a/CMake/mitkMacroCreateCTKPlugin.cmake
+++ /dev/null
@@ -1,7 +0,0 @@
-macro(MACRO_CREATE_MITK_CTK_PLUGIN)
-
-  message(WARNING "The MACRO_CREATE_MITK_CTK_PLUGIN macro is deprecated since 2015.05. Use mitk_create_plugin instead.")
-
-  mitk_create_plugin(${ARGN})
-
-endmacro()
diff --git a/CMakeLists.txt b/CMakeLists.txt
index 93ad529af3..adb7e97452 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -1,1416 +1,1413 @@
 #[[ When increasing the minimum required version, check if Boost_ADDITIONAL_VERSIONS
     in CMake/PackageDepends/MITK_Boost_Config.cmake can be removed. See the first
     long comment in CMakeExternals/Boost.cmake for details. ]]
 
 set(MITK_CMAKE_MINIMUM_REQUIRED_VERSION 3.18)
 cmake_minimum_required(VERSION ${MITK_CMAKE_MINIMUM_REQUIRED_VERSION})
 
 if(CMAKE_VERSION VERSION_GREATER_EQUAL 3.19 AND CMAKE_VERSION VERSION_LESS 3.19.2)
   message(FATAL_ERROR "\
 CMake v${CMAKE_VERSION} is defective [1]. \
 Please either downgrade to v3.18 or upgrade to at least v3.19.2.\n\
 [1] https://gitlab.kitware.com/cmake/cmake/-/issues/21529")
 endif()
 
 #-----------------------------------------------------------------------------
 # Policies
 #-----------------------------------------------------------------------------
 
 #[[ T28060
 
     https://cmake.org/cmake/help/v3.18/policy/CMP0091.html
     https://cmake.org/cmake/help/v3.18/variable/CMAKE_MSVC_RUNTIME_LIBRARY.html
 
     We pass CMP0091 to all external projects as command-line argument:
       -DCMAKE_POLICY_DEFAULT_CMP0091:STRING=OLD
  ]]
 cmake_policy(SET CMP0091 OLD)
 
 if(POLICY CMP0135)
   cmake_policy(SET CMP0135 NEW) # https://cmake.org/cmake/help/v3.24/policy/CMP0135.html
 endif()
 
 #-----------------------------------------------------------------------------
 # Superbuild Option - Enabled by default
 #-----------------------------------------------------------------------------
 
 option(MITK_USE_SUPERBUILD "Build MITK and the projects it depends on via SuperBuild.cmake." ON)
 
 if(MITK_USE_SUPERBUILD)
   project(MITK-superbuild)
   set(MITK_SOURCE_DIR ${PROJECT_SOURCE_DIR})
   set(MITK_BINARY_DIR ${PROJECT_BINARY_DIR})
 else()
   project(MITK VERSION 2023.12.99)
   include_directories(SYSTEM ${MITK_SUPERBUILD_BINARY_DIR})
 endif()
 
 #-----------------------------------------------------------------------------
 # MITK Extension Feature
 #-----------------------------------------------------------------------------
 
 set(MITK_EXTENSION_DIRS "" CACHE STRING "")
 
 unset(MITK_ABSOLUTE_EXTENSION_DIRS)
 
 foreach(MITK_EXTENSION_DIR ${MITK_EXTENSION_DIRS})
   get_filename_component(MITK_ABSOLUTE_EXTENSION_DIR "${MITK_EXTENSION_DIR}" ABSOLUTE)
   list(APPEND MITK_ABSOLUTE_EXTENSION_DIRS "${MITK_ABSOLUTE_EXTENSION_DIR}")
 endforeach()
 
 set(MITK_DIR_PLUS_EXTENSION_DIRS "${MITK_SOURCE_DIR}" ${MITK_ABSOLUTE_EXTENSION_DIRS})
 
 #-----------------------------------------------------------------------------
 # Update CMake module path
 #-----------------------------------------------------------------------------
 
 set(MITK_CMAKE_DIR ${MITK_SOURCE_DIR}/CMake)
 
 set(CMAKE_MODULE_PATH ${MITK_CMAKE_DIR})
 
 foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
   set(MITK_CMAKE_EXTENSION_DIR "${MITK_EXTENSION_DIR}/CMake")
   if(EXISTS "${MITK_CMAKE_EXTENSION_DIR}")
     list(APPEND CMAKE_MODULE_PATH "${MITK_CMAKE_EXTENSION_DIR}")
   endif()
 endforeach()
 
 #-----------------------------------------------------------------------------
 # CMake function(s) and macro(s)
 #-----------------------------------------------------------------------------
 
 # Standard CMake macros
 include(FeatureSummary)
 include(CTest)
 include(CMakeParseArguments)
 include(FindPackageHandleStandardArgs)
 
 # MITK macros
 include(mitkFunctionGetGccVersion)
 include(mitkFunctionCheckCompilerFlags)
 include(mitkFunctionSuppressWarnings) # includes several functions
 include(mitkMacroEmptyExternalProject)
 include(mitkFunctionEnableBuildConfiguration)
 include(mitkFunctionWhitelists)
 include(mitkFunctionAddExternalProject)
 include(mitkFunctionAddLibrarySearchPaths)
 
 SUPPRESS_VC_DEPRECATED_WARNINGS()
 
 #-----------------------------------------------------------------------------
 # Set a default build type if none was specified
 #-----------------------------------------------------------------------------
 
 if(NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
   message(STATUS "Setting build type to 'Debug' as none was specified.")
   set(CMAKE_BUILD_TYPE Debug CACHE STRING "Choose the type of build." FORCE)
 
   # Set the possible values of build type for cmake-gui
   set_property(CACHE CMAKE_BUILD_TYPE PROPERTY
                STRINGS "Debug" "Release" "MinSizeRel" "RelWithDebInfo")
 endif()
 
 if(CMAKE_COMPILER_IS_GNUCXX)
   mitkFunctionGetGccVersion(${CMAKE_CXX_COMPILER} GCC_VERSION)
 else()
   set(GCC_VERSION 0)
 endif()
 
 set(MITK_CXX_STANDARD 17)
 
 set(CMAKE_CXX_EXTENSIONS 0)
 set(CMAKE_CXX_STANDARD ${MITK_CXX_STANDARD})
 set(CMAKE_CXX_STANDARD_REQUIRED 1)
 
 # This is necessary to avoid problems with compile feature checks.
 # CMAKE_CXX_STANDARD seems to only set the -std=c++<std> flag for targets.
 # However, compile flag checks also need to be done with -std=c++<std>.
 # The MITK_CXX<std>_FLAG variable is also used for external projects
 # build during the MITK super-build.
 mitkFunctionCheckCompilerFlags("-std=c++${MITK_CXX_STANDARD}" MITK_CXX${MITK_CXX_STANDARD}_FLAG)
 
 #-----------------------------------------------------------------------------
 # Warn if source or build path is too long
 #-----------------------------------------------------------------------------
 
 if(WIN32)
   set(_src_dir_length_max 50)
   set(_bin_dir_length_max 50)
   if(MITK_USE_SUPERBUILD)
     set(_src_dir_length_max 34) # _src_dir_length_max - strlen(ep/src/ITK-build)
     set(_bin_dir_length_max 40) # _bin_dir_length_max - strlen(MITK-build)
   endif()
 
   string(LENGTH "${MITK_SOURCE_DIR}" _src_n)
   string(LENGTH "${MITK_BINARY_DIR}" _bin_n)
 
   # The warnings should be converted to errors
   if(_src_n GREATER _src_dir_length_max)
     message(WARNING "MITK source code directory path length is too long (${_src_n} > ${_src_dir_length_max})."
                     "Please move the MITK source code directory to a directory with a shorter path." )
   endif()
   if(_bin_n GREATER _bin_dir_length_max)
     message(WARNING "MITK build directory path length is too long (${_bin_n} > ${_bin_dir_length_max})."
                     "Please move the MITK build directory to a directory with a shorter path." )
   endif()
 endif()
 
 #-----------------------------------------------------------------------------
 # Additional MITK Options (also shown during superbuild)
 #-----------------------------------------------------------------------------
 
 # -----------------------------------------
 # General build options
 option(BUILD_SHARED_LIBS "Build MITK with shared libraries" ON)
 option(WITH_COVERAGE "Enable/Disable coverage" OFF)
 option(BUILD_TESTING "Test the project" ON)
 option(MITK_FAST_TESTING "Disable long-running tests like packaging" OFF)
 option(MITK_XVFB_TESTING "Execute test drivers through xvfb-run" OFF)
 
 option(MITK_BUILD_ALL_APPS "Build all MITK applications" OFF)
 option(MITK_BUILD_EXAMPLES "Build the MITK Examples" OFF)
 
 mark_as_advanced(
   MITK_XVFB_TESTING
   MITK_FAST_TESTING
   MITK_BUILD_ALL_APPS
 )
 
 #-----------------------------------------------------------------------------
 # Set UI testing flags
 #-----------------------------------------------------------------------------
 if(MITK_XVFB_TESTING)
   set(MITK_XVFB_TESTING_COMMAND "xvfb-run" "--auto-servernum" CACHE STRING "Command and options to test through Xvfb")
   mark_as_advanced(MITK_XVFB_TESTING_COMMAND)
 endif(MITK_XVFB_TESTING)
 
 # -----------------------------------------
 # Other options
 set(MITK_CUSTOM_REVISION_DESC "" CACHE STRING "Override MITK revision description")
 mark_as_advanced(MITK_CUSTOM_REVISION_DESC)
 
 set_property(GLOBAL PROPERTY MITK_EXTERNAL_PROJECTS "")
 
 include(CMakeExternals/ExternalProjectList.cmake)
 
 foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
   set(MITK_CMAKE_EXTERNALS_EXTENSION_DIR "${MITK_EXTENSION_DIR}/CMakeExternals")
   if(EXISTS "${MITK_CMAKE_EXTERNALS_EXTENSION_DIR}/ExternalProjectList.cmake")
     include("${MITK_CMAKE_EXTERNALS_EXTENSION_DIR}/ExternalProjectList.cmake")
   endif()
 endforeach()
 
 # -----------------------------------------
 # Other MITK_USE_* options not related to
 # external projects build via the
 # MITK superbuild
 
 option(MITK_USE_BLUEBERRY "Build the BlueBerry platform" ON)
 option(MITK_USE_OpenMP "Use OpenMP" OFF)
 option(MITK_USE_Python3 "Use Python 3" OFF)
 
 #-----------------------------------------------------------------------------
 # Build configurations
 #-----------------------------------------------------------------------------
 
 set(_buildConfigs "Custom")
 
 file(GLOB _buildConfigFiles CMake/BuildConfigurations/*.cmake)
 
 foreach(_buildConfigFile ${_buildConfigFiles})
   get_filename_component(_buildConfigFile ${_buildConfigFile} NAME_WE)
   list(APPEND _buildConfigs ${_buildConfigFile})
 endforeach()
 
 foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
   file(GLOB _extBuildConfigFiles "${MITK_EXTENSION_DIR}/CMake/BuildConfigurations/*.cmake")
 
   foreach(_extBuildConfigFile ${_extBuildConfigFiles})
     get_filename_component(_extBuildConfigFile "${_extBuildConfigFile}" NAME_WE)
     list(APPEND _buildConfigs "${_extBuildConfigFile}")
   endforeach()
 
   list(REMOVE_DUPLICATES _buildConfigs)
 endforeach()
 
 set(MITK_BUILD_CONFIGURATION "Custom" CACHE STRING "Use pre-defined MITK configurations")
 set_property(CACHE MITK_BUILD_CONFIGURATION PROPERTY STRINGS ${_buildConfigs})
 
 mitkFunctionEnableBuildConfiguration()
 
 mitkFunctionCreateWhitelistPaths(MITK)
 mitkFunctionFindWhitelists(MITK)
 
 # -----------------------------------------
 # Qt version related variables
 
 option(MITK_USE_Qt6 "Use Qt 6 library" ON)
 
 if(MITK_USE_Qt6)
   set(MITK_QT6_MINIMUM_VERSION 6.6)
   set(MITK_QT6_COMPONENTS
     Concurrent
     Core
     Core5Compat
     CoreTools
     Designer
     DesignerComponentsPrivate
     Gui
     Help
     LinguistTools
     Network
     OpenGL
     OpenGLWidgets
     Qml
     Sql
     StateMachine
     Svg
     ToolsTools
     UiTools
     WebEngineCore
     WebEngineWidgets
     Widgets
     Xml
   )
   if(APPLE)
     list(APPEND MITK_QT6_COMPONENTS DBus)
   endif()
 
   # Hint at default install locations of Qt
   if(NOT Qt6_DIR)
     if(MSVC)
       set(_dir_candidates "C:/Qt")
 
       if(CMAKE_GENERATOR MATCHES "^Visual Studio [0-9]+ ([0-9]+)")
         set(_compilers "msvc${CMAKE_MATCH_1}")
       elseif(CMAKE_GENERATOR MATCHES "Ninja")
         include(mitkFunctionGetMSVCVersion)
         mitkFunctionGetMSVCVersion()
         if(VISUAL_STUDIO_PRODUCT_NAME MATCHES "^Visual Studio ([0-9]+)")
           set(_compilers "msvc${CMAKE_MATCH_1}")
         endif()
       endif()
 
       if(_compilers MATCHES "[0-9]+")
         if (CMAKE_MATCH_0 EQUAL 2022)
           list(APPEND _compilers "msvc2019") # Binary compatible
         endif()
       endif()
     else()
       set(_dir_candidates ~/Qt)
 
       if(APPLE)
         set(_compilers clang)
       else()
         list(APPEND _dir_candidates /opt/Qt)
         set(_compilers gcc)
       endif()
     endif()
 
     if(CMAKE_SIZEOF_VOID_P EQUAL 8)
       foreach(_compiler ${_compilers})
         list(APPEND _compilers64 "${_compiler}_64")
       endforeach()
       set(_compilers ${_compilers64})
     endif()
 
     if(APPLE)
       list(APPEND _compilers macos)
     endif()
 
     foreach(_dir_candidate ${_dir_candidates})
       get_filename_component(_dir_candidate ${_dir_candidate} REALPATH)
       foreach(_compiler ${_compilers})
         set(_glob_expression "${_dir_candidate}/6.*/${_compiler}")
         file(GLOB _hints ${_glob_expression})
         list(SORT _hints)
         list(APPEND MITK_QT6_HINTS ${_hints})
       endforeach()
     endforeach()
   endif()
 
   find_package(Qt6 ${MITK_QT6_MINIMUM_VERSION} COMPONENTS ${MITK_QT6_COMPONENTS} REQUIRED HINTS ${MITK_QT6_HINTS})
 
   get_target_property(QT_QMAKE_EXECUTABLE Qt6::qmake LOCATION)
   get_target_property(QT_HELPGENERATOR_EXECUTABLE Qt6::qhelpgenerator LOCATION)
 endif()
 
 if(Qt6_DIR)
   list(APPEND CMAKE_PREFIX_PATH "${Qt6_DIR}/../../..")
   list(REMOVE_DUPLICATES CMAKE_PREFIX_PATH)
 endif()
 
 # -----------------------------------------
 # Custom dependency logic
 
 if(WIN32 AND Qt6_DIR)
   set(_dir_candidate "${Qt6_DIR}/../../../../../Tools/OpenSSLv3/Win_x64")
   get_filename_component(_dir_candidate ${_dir_candidate} ABSOLUTE)
   if(EXISTS "${_dir_candidate}")
     set(OPENSSL_ROOT_DIR "${_dir_candidate}")
   endif()
 endif()
 
 find_package(OpenSSL 3)
 
 if(NOT OpenSSL_FOUND)
   find_package(OpenSSL 1.1.1)
 endif()
 
 option(MITK_USE_SYSTEM_Boost "Use the system Boost" OFF)
 
 set(MITK_USE_Boost_LIBRARIES "" CACHE STRING "A semi-colon separated list of required Boost libraries")
 
 if(MITK_USE_cpprestsdk)
   if(NOT OpenSSL_FOUND)
     set(openssl_message "Could not find OpenSSL (dependency of C++ REST SDK).\n")
     if(UNIX)
       if(APPLE)
         set(openssl_message "${openssl_message}Please install it using your favorite package management "
                             "system (i.e. Homebrew or MacPorts).\n")
       else()
         set(openssl_message "${openssl_message}Please install the dev package of OpenSSL (i.e. libssl-dev).\n")
       endif()
     else()
       set(openssl_message "${openssl_message}Please either install Win32 OpenSSL:\n"
                           "  https://slproweb.com/products/Win32OpenSSL.html\n"
                           "Or use the Qt Maintenance tool to install:\n"
                           "  Developer and Designer Tools > OpenSSL Toolkit > OpenSSL 64-bit binaries\n")
     endif()
     set(openssl_message "${openssl_message}If it still cannot be found, you can hint CMake to find OpenSSL by "
                         "adding/setting the OPENSSL_ROOT_DIR variable to the root directory of an "
                         "OpenSSL installation. Make sure to clear variables of partly found "
                         "versions of OpenSSL before, or they will be mixed up.")
     message(FATAL_ERROR ${openssl_message})
   endif()
 
   list(APPEND MITK_USE_Boost_LIBRARIES date_time regex system)
   if(UNIX)
     list(APPEND MITK_USE_Boost_LIBRARIES atomic chrono filesystem random thread)
   endif()
   list(REMOVE_DUPLICATES MITK_USE_Boost_LIBRARIES)
   set(MITK_USE_Boost_LIBRARIES ${MITK_USE_Boost_LIBRARIES} CACHE STRING "A semi-colon separated list of required Boost libraries" FORCE)
 endif()
 
 if(MITK_USE_Python3)
   set(MITK_USE_ZLIB ON CACHE BOOL "" FORCE)
 
   if(APPLE)
     set(python3_mininum_version 3.11)
   else()
     set(python3_mininum_version 3.8)
   endif()
 
   find_package(Python3 ${python3_mininum_version} REQUIRED COMPONENTS Interpreter Development NumPy)
 
   if(WIN32)
     string(REPLACE "\\" "/" Python3_STDARCH "${Python3_STDARCH}")
     string(REPLACE "\\" "/" Python3_STDLIB "${Python3_STDLIB}")
     string(REPLACE "\\" "/" Python3_SITELIB "${Python3_SITELIB}")
   endif()
 endif()
 
 if(BUILD_TESTING AND NOT MITK_USE_CppUnit)
   message("> Forcing MITK_USE_CppUnit to ON because BUILD_TESTING=ON")
   set(MITK_USE_CppUnit ON CACHE BOOL "Use CppUnit for unit tests" FORCE)
 endif()
 
 if(MITK_USE_BLUEBERRY)
   option(MITK_BUILD_ALL_PLUGINS "Build all MITK plugins" OFF)
   mark_as_advanced(MITK_BUILD_ALL_PLUGINS)
 
   if(NOT MITK_USE_CTK)
     message("> Forcing MITK_USE_CTK to ON because of MITK_USE_BLUEBERRY")
     set(MITK_USE_CTK ON CACHE BOOL "Use CTK in MITK" FORCE)
   endif()
 endif()
 
 #-----------------------------------------------------------------------------
 # Pixel type multiplexing
 #-----------------------------------------------------------------------------
 
 # Customize the default pixel types for multiplex macros
 
 set(MITK_ACCESSBYITK_INTEGRAL_PIXEL_TYPES
     "int, unsigned int, short, unsigned short, char, unsigned char"
     CACHE STRING "List of integral pixel types used in AccessByItk and InstantiateAccessFunction macros")
 
 set(MITK_ACCESSBYITK_FLOATING_PIXEL_TYPES
     "double, float"
     CACHE STRING "List of floating pixel types used in AccessByItk and InstantiateAccessFunction macros")
 
 set(MITK_ACCESSBYITK_COMPOSITE_PIXEL_TYPES
     "itk::RGBPixel<unsigned char>, itk::RGBAPixel<unsigned char>"
     CACHE STRING "List of composite pixel types used in AccessByItk and InstantiateAccessFunction macros")
 
 set(MITK_ACCESSBYITK_DIMENSIONS
     "2,3"
     CACHE STRING "List of dimensions used in AccessByItk and InstantiateAccessFunction macros")
 
 mark_as_advanced(MITK_ACCESSBYITK_INTEGRAL_PIXEL_TYPES
                  MITK_ACCESSBYITK_FLOATING_PIXEL_TYPES
                  MITK_ACCESSBYITK_COMPOSITE_PIXEL_TYPES
                  MITK_ACCESSBYITK_DIMENSIONS
                 )
 
 # consistency checks
 
 if(NOT MITK_ACCESSBYITK_INTEGRAL_PIXEL_TYPES)
   set(MITK_ACCESSBYITK_INTEGRAL_PIXEL_TYPES
       "int, unsigned int, short, unsigned short, char, unsigned char"
       CACHE STRING "List of integral pixel types used in AccessByItk and InstantiateAccessFunction macros" FORCE)
 endif()
 
 if(NOT MITK_ACCESSBYITK_FLOATING_PIXEL_TYPES)
   set(MITK_ACCESSBYITK_FLOATING_PIXEL_TYPES
       "double, float"
       CACHE STRING "List of floating pixel types used in AccessByItk and InstantiateAccessFunction macros" FORCE)
 endif()
 
 if(NOT MITK_ACCESSBYITK_COMPOSITE_PIXEL_TYPES)
   set(MITK_ACCESSBYITK_COMPOSITE_PIXEL_TYPES
     "itk::RGBPixel<unsigned char>, itk::RGBAPixel<unsigned char>"
     CACHE STRING "List of composite pixel types used in AccessByItk and InstantiateAccessFunction macros" FORCE)
 endif()
 
 if(NOT MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES)
   string(REPLACE "," ";" _integral_types ${MITK_ACCESSBYITK_INTEGRAL_PIXEL_TYPES})
   string(REPLACE "," ";" _floating_types ${MITK_ACCESSBYITK_FLOATING_PIXEL_TYPES})
   foreach(_scalar_type ${_integral_types} ${_floating_types})
     set(MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES
         "${MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES}itk::VariableLengthVector<${_scalar_type}>,")
   endforeach()
   string(LENGTH "${MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES}" _length)
   math(EXPR _length "${_length} - 1")
   string(SUBSTRING "${MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES}" 0 ${_length} MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES)
   set(MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES ${MITK_ACCESSBYITK_VECTOR_PIXEL_TYPES}
       CACHE STRING "List of vector pixel types used in AccessByItk and InstantiateAccessFunction macros for itk::VectorImage types" FORCE)
 endif()
 
 if(NOT MITK_ACCESSBYITK_DIMENSIONS)
   set(MITK_ACCESSBYITK_DIMENSIONS
       "2,3"
       CACHE STRING "List of dimensions used in AccessByItk and InstantiateAccessFunction macros")
 endif()
 
 find_package(Git REQUIRED)
 
 #-----------------------------------------------------------------------------
 # Superbuild script
 #-----------------------------------------------------------------------------
 
 if(MITK_USE_SUPERBUILD)
   include("${CMAKE_CURRENT_SOURCE_DIR}/SuperBuild.cmake")
 
   # Print configuration summary
   message("\n\n")
   feature_summary(
     DESCRIPTION "------- FEATURE SUMMARY FOR ${PROJECT_NAME} -------"
     WHAT ALL)
   return()
 endif()
 
 #*****************************************************************************
 #****************************  END OF SUPERBUILD  ****************************
 #*****************************************************************************
 
 #-----------------------------------------------------------------------------
 # Organize MITK targets in folders
 #-----------------------------------------------------------------------------
 
 set_property(GLOBAL PROPERTY USE_FOLDERS ON)
 set(MITK_ROOT_FOLDER "MITK" CACHE STRING "")
 mark_as_advanced(MITK_ROOT_FOLDER)
 
 #-----------------------------------------------------------------------------
 # CMake function(s) and macro(s)
 #-----------------------------------------------------------------------------
 
 include(WriteBasicConfigVersionFile)
 include(CheckCXXSourceCompiles)
 include(GenerateExportHeader)
 
 include(mitkFunctionAddManifest)
 include(mitkFunctionAddCustomModuleTest)
 include(mitkFunctionCheckModuleDependencies)
 include(mitkFunctionCompileSnippets)
 include(mitkFunctionConfigureVisualStudioUserProjectFile)
 include(mitkFunctionCreateBlueBerryApplication)
 include(mitkFunctionCreateCommandLineApp)
 include(mitkFunctionCreateModule)
 include(mitkFunctionCreatePlugin)
 include(mitkFunctionCreateProvisioningFile)
 include(mitkFunctionGetLibrarySearchPaths)
 include(mitkFunctionGetVersion)
 include(mitkFunctionGetVersionDescription)
 include(mitkFunctionInstallAutoLoadModules)
 include(mitkFunctionInstallCTKPlugin)
 include(mitkFunctionInstallProvisioningFiles)
 include(mitkFunctionInstallThirdPartyCTKPlugins)
 include(mitkFunctionOrganizeSources)
 include(mitkFunctionUseModules)
 if( ${MITK_USE_MatchPoint} )
   include(mitkFunctionCreateMatchPointDeployedAlgorithm)
 endif()
 include(mitkMacroConfigureItkPixelTypes)
 include(mitkMacroCreateExecutable)
 include(mitkMacroCreateModuleTests)
 include(mitkMacroGenerateToolsLibrary)
 include(mitkMacroGetLinuxDistribution)
 include(mitkMacroGetPMDPlatformString)
 include(mitkMacroInstall)
 include(mitkMacroInstallHelperApp)
 include(mitkMacroInstallTargets)
 include(mitkMacroMultiplexPicType)
 
-# Deprecated
-include(mitkMacroCreateCTKPlugin)
-
 #-----------------------------------------------------------------------------
 # Global CMake variables
 #-----------------------------------------------------------------------------
 
 if(NOT DEFINED CMAKE_DEBUG_POSTFIX)
   # We can't do this yet because the CTK Plugin Framework
   # cannot cope with a postfix yet.
   #set(CMAKE_DEBUG_POSTFIX d)
 endif()
 
 #-----------------------------------------------------------------------------
 # Output directories.
 #-----------------------------------------------------------------------------
 
 set(_default_LIBRARY_output_dir lib)
 set(_default_RUNTIME_output_dir bin)
 set(_default_ARCHIVE_output_dir lib)
 
 foreach(type LIBRARY RUNTIME ARCHIVE)
   # Make sure the directory exists
   if(MITK_CMAKE_${type}_OUTPUT_DIRECTORY
      AND NOT EXISTS ${MITK_CMAKE_${type}_OUTPUT_DIRECTORY})
     message("Creating directory MITK_CMAKE_${type}_OUTPUT_DIRECTORY: ${MITK_CMAKE_${type}_OUTPUT_DIRECTORY}")
     file(MAKE_DIRECTORY "${MITK_CMAKE_${type}_OUTPUT_DIRECTORY}")
   endif()
 
   if(MITK_CMAKE_${type}_OUTPUT_DIRECTORY)
     set(CMAKE_${type}_OUTPUT_DIRECTORY ${MITK_CMAKE_${type}_OUTPUT_DIRECTORY})
   else()
     set(CMAKE_${type}_OUTPUT_DIRECTORY ${PROJECT_BINARY_DIR}/${_default_${type}_output_dir})
     set(MITK_CMAKE_${type}_OUTPUT_DIRECTORY ${CMAKE_${type}_OUTPUT_DIRECTORY})
   endif()
 
   set(CMAKE_${type}_OUTPUT_DIRECTORY ${CMAKE_${type}_OUTPUT_DIRECTORY} CACHE INTERNAL "Output directory for ${type} files.")
   mark_as_advanced(CMAKE_${type}_OUTPUT_DIRECTORY)
 endforeach()
 
 #-----------------------------------------------------------------------------
 # Set MITK specific options and variables (NOT available during superbuild)
 #-----------------------------------------------------------------------------
 
 if(OpenSSL_FOUND AND WIN32)
   #[[ On Windows, CMake is able to locate the link libraries for OpenSSL but it
       does not look for the corresponding DLLs that we need to copy to our
       binary directories and include in packaging.
 
       Setting these paths manually is cumbersome so we try to use a simple
       heuristic to automatically set them:
 
         - Based on the link libraries (usually located in a lib folder),
           try to find the "../bin" binary directory.
         - Use the base file names of the link libraries to find corresponding
           DLLs like "<base name>*.dll", that usually are named like
           "<base name>-1_1-x64.dll" or similar.
    ]]
   set(openssl_ssl_dll "")
   set(openssl_crypto_dll "")
 
   if(OPENSSL_SSL_LIBRARY AND EXISTS "${OPENSSL_SSL_LIBRARY}")
     get_filename_component(openssl_bin_dir "${OPENSSL_SSL_LIBRARY}" DIRECTORY)
     get_filename_component(openssl_bin_dir "${openssl_bin_dir}" DIRECTORY)
     set(openssl_bin_dir "${openssl_bin_dir}/bin")
 
     if(EXISTS "${openssl_bin_dir}")
       get_filename_component(openssl_ssl_basename "${OPENSSL_SSL_LIBRARY}" NAME_WE)
       file(GLOB openssl_ssl_dll "${openssl_bin_dir}/${openssl_ssl_basename}*.dll")
       list(LENGTH openssl_ssl_dll num_findings)
       if(num_findings GREATER 1)
         set(openssl_ssl_dll "")
       endif()
 
       get_filename_component(openssl_crypto_basename "${OPENSSL_CRYPTO_LIBRARY}" NAME_WE)
       file(GLOB openssl_crypto_dll "${openssl_bin_dir}/${openssl_crypto_basename}*.dll")
       list(LENGTH openssl_crypto_dll num_findings)
       if(num_findings GREATER 1)
         set(openssl_crypto_dll "")
       endif()
     endif()
   endif()
 
   set(MITK_OPENSSL_SSL_DLL "${openssl_ssl_dll}" CACHE FILEPATH "")
 
   if(DEFINED CACHE{MITK_OPENSSL_SSL_DLL} AND NOT MITK_OPENSSL_SSL_DLL AND openssl_ssl_dll)
     set(MITK_OPENSSL_SSL_DLL "${openssl_ssl_dll}" CACHE FILEPATH "" FORCE)
   endif()
 
   set(MITK_OPENSSL_CRYPTO_DLL "${openssl_crypto_dll}" CACHE FILEPATH "")
 
   if(DEFINED CACHE{MITK_OPENSSL_CRYPTO_DLL} AND NOT MITK_OPENSSL_CRYPTO_DLL AND openssl_crypto_dll)
     set(MITK_OPENSSL_CRYPTO_DLL "${openssl_crypto_dll}" CACHE FILEPATH "" FORCE)
   endif()
 
   if(MITK_OPENSSL_SSL_DLL AND EXISTS "${MITK_OPENSSL_SSL_DLL}" AND MITK_OPENSSL_CRYPTO_DLL AND EXISTS "${MITK_OPENSSL_CRYPTO_DLL}")
     foreach(config_type ${CMAKE_CONFIGURATION_TYPES})
       execute_process(COMMAND "${CMAKE_COMMAND}" -E make_directory "${MITK_BINARY_DIR}/bin/${config_type}")
       configure_file("${MITK_OPENSSL_SSL_DLL}" "${MITK_BINARY_DIR}/bin/${config_type}/" COPYONLY)
       configure_file("${MITK_OPENSSL_CRYPTO_DLL}" "${MITK_BINARY_DIR}/bin/${config_type}/" COPYONLY)
     endforeach()
 
     MITK_INSTALL(FILES
       "${MITK_OPENSSL_SSL_DLL}"
       "${MITK_OPENSSL_CRYPTO_DLL}"
     )
   endif()
 endif()
 
 # Look for optional Doxygen package
 find_package(Doxygen)
 
 option(BLUEBERRY_DEBUG_SMARTPOINTER "Enable code for debugging smart pointers" OFF)
 mark_as_advanced(BLUEBERRY_DEBUG_SMARTPOINTER)
 
 # Ask the user to show the console window for applications
 option(MITK_SHOW_CONSOLE_WINDOW "Use this to enable or disable the console window when starting MITK GUI Applications" ON)
 mark_as_advanced(MITK_SHOW_CONSOLE_WINDOW)
 
 if(NOT MITK_FAST_TESTING)
   if(MITK_CTEST_SCRIPT_MODE STREQUAL "Continuous" OR MITK_CTEST_SCRIPT_MODE STREQUAL "Experimental")
     set(MITK_FAST_TESTING ON)
   endif()
 endif()
 
 if(NOT UNIX)
   set(MITK_WIN32_FORCE_STATIC "STATIC" CACHE INTERNAL "Use this variable to always build static libraries on non-unix platforms")
 endif()
 
 if(MITK_BUILD_ALL_PLUGINS)
   set(MITK_BUILD_ALL_PLUGINS_OPTION "FORCE_BUILD_ALL")
 endif()
 
 # Configure pixel types used for ITK image access multiplexing
 mitkMacroConfigureItkPixelTypes()
 
 # Configure module naming conventions
 set(MITK_MODULE_NAME_REGEX_MATCH "^[A-Z].*$")
 set(MITK_MODULE_NAME_REGEX_NOT_MATCH "^[Mm][Ii][Tt][Kk].*$")
 set(MITK_DEFAULT_MODULE_NAME_PREFIX "Mitk")
 set(MITK_MODULE_NAME_PREFIX ${MITK_DEFAULT_MODULE_NAME_PREFIX})
 set(MITK_MODULE_NAME_DEFAULTS_TO_DIRECTORY_NAME 1)
 
 #-----------------------------------------------------------------------------
 # Get MITK version info
 #-----------------------------------------------------------------------------
 
 mitkFunctionGetVersion(${MITK_SOURCE_DIR} MITK)
 mitkFunctionGetVersionDescription(${MITK_SOURCE_DIR} MITK)
 
 # MITK_VERSION
 set(MITK_VERSION_STRING "${MITK_VERSION_MAJOR}.${MITK_VERSION_MINOR}.${MITK_VERSION_PATCH}")
 if(MITK_VERSION_PATCH STREQUAL "99")
   set(MITK_VERSION_STRING "${MITK_VERSION_STRING}-${MITK_REVISION_SHORTID}")
 endif()
 
 #-----------------------------------------------------------------------------
 # Installation preparation
 #
 # These should be set before any MITK install macros are used
 #-----------------------------------------------------------------------------
 
 # on macOS all BlueBerry plugins get copied into every
 # application bundle (.app directory) specified here
 if(MITK_USE_BLUEBERRY AND APPLE)
 
   foreach(MITK_EXTENSION_DIR ${MITK_DIR_PLUS_EXTENSION_DIRS})
     set(MITK_APPLICATIONS_EXTENSION_DIR "${MITK_EXTENSION_DIR}/Applications")
     if(EXISTS "${MITK_APPLICATIONS_EXTENSION_DIR}/AppList.cmake")
       set(MITK_APPS "")
       include("${MITK_APPLICATIONS_EXTENSION_DIR}/AppList.cmake")
       foreach(mitk_app ${MITK_APPS})
         # extract option_name
         string(REPLACE "^^" "\\;" target_info ${mitk_app})
         set(target_info_list ${target_info})
         list(GET target_info_list 1 option_name)
         list(GET target_info_list 0 app_name)
         # check if the application is enabled
         if(${option_name} OR MITK_BUILD_ALL_APPS)
           set(MACOSX_BUNDLE_NAMES ${MACOSX_BUNDLE_NAMES} Mitk${app_name})
         endif()
       endforeach()
     endif()
   endforeach()
 
 endif()
 
 #-----------------------------------------------------------------------------
 # Set coverage Flags
 #-----------------------------------------------------------------------------
 
 if(WITH_COVERAGE)
   if("${CMAKE_CXX_COMPILER_ID}" STREQUAL "GNU")
     set(coverage_flags "-g -fprofile-arcs -ftest-coverage -O0 -DNDEBUG")
     set(COVERAGE_CXX_FLAGS ${coverage_flags})
     set(COVERAGE_C_FLAGS ${coverage_flags})
   endif()
 endif()
 
 #-----------------------------------------------------------------------------
 # MITK C/CXX Flags
 #-----------------------------------------------------------------------------
 
 set(MITK_C_FLAGS "${COVERAGE_C_FLAGS}")
 set(MITK_C_FLAGS_DEBUG )
 set(MITK_C_FLAGS_RELEASE )
 set(MITK_CXX_FLAGS "${COVERAGE_CXX_FLAGS} ${MITK_CXX${MITK_CXX_STANDARD}_FLAG}")
 set(MITK_CXX_FLAGS_DEBUG )
 set(MITK_CXX_FLAGS_RELEASE )
 
 set(MITK_EXE_LINKER_FLAGS )
 set(MITK_SHARED_LINKER_FLAGS )
 
 if(WIN32)
   set(MITK_CXX_FLAGS "${MITK_CXX_FLAGS} -DWIN32_LEAN_AND_MEAN -DNOMINMAX")
   mitkFunctionCheckCompilerFlags("/wd4005" MITK_CXX_FLAGS) # warning C4005: macro redefinition
   mitkFunctionCheckCompilerFlags("/wd4231" MITK_CXX_FLAGS) # warning C4231: nonstandard extension used : 'extern' before template explicit instantiation
   # the following line should be removed after fixing bug 17637
   mitkFunctionCheckCompilerFlags("/wd4316" MITK_CXX_FLAGS) # warning C4316: object alignment on heap
   mitkFunctionCheckCompilerFlags("/wd4180" MITK_CXX_FLAGS) # warning C4180: qualifier applied to function type has no meaning
   mitkFunctionCheckCompilerFlags("/wd4251" MITK_CXX_FLAGS) # warning C4251: 'identifier' : class 'type' needs to have dll-interface to be used by clients of class 'type2'
 endif()
 
 if(APPLE)
   set(MITK_CXX_FLAGS "${MITK_CXX_FLAGS} -DGL_SILENCE_DEPRECATION") # Apple deprecated OpenGL in macOS 10.14
 endif()
 
 if(NOT MSVC_VERSION)
   foreach(_flag
     -Wall
     -Wextra
     -Wpointer-arith
     -Winvalid-pch
     -Wcast-align
     -Wwrite-strings
     -Wno-error=gnu
     -Wno-error=unknown-pragmas
     # The strict-overflow warning is generated by ITK template code
     -Wno-error=strict-overflow
     -Woverloaded-virtual
     -Wstrict-null-sentinel
     #-Wold-style-cast
     #-Wsign-promo
     -Wno-deprecated-copy
     -Wno-array-bounds
     -Wno-cast-function-type
     -Wno-maybe-uninitialized
     -Wno-error=stringop-overread
     -fdiagnostics-show-option
     )
     mitkFunctionCheckCAndCXXCompilerFlags(${_flag} MITK_C_FLAGS MITK_CXX_FLAGS)
   endforeach()
 endif()
 
 if(CMAKE_COMPILER_IS_GNUCXX AND NOT APPLE)
   mitkFunctionCheckCompilerFlags("-Wl,--no-undefined" MITK_SHARED_LINKER_FLAGS)
   mitkFunctionCheckCompilerFlags("-Wl,--as-needed" MITK_SHARED_LINKER_FLAGS)
 endif()
 
 if(CMAKE_COMPILER_IS_GNUCXX)
   mitkFunctionCheckCAndCXXCompilerFlags("-fstack-protector-all" MITK_C_FLAGS MITK_CXX_FLAGS)
   set(MITK_CXX_FLAGS_RELEASE "-U_FORTIFY_SOURCES -D_FORTIFY_SOURCE=2 ${MITK_CXX_FLAGS_RELEASE}")
 endif()
 
 set(MITK_MODULE_LINKER_FLAGS ${MITK_SHARED_LINKER_FLAGS})
 set(MITK_EXE_LINKER_FLAGS ${MITK_SHARED_LINKER_FLAGS})
 
 #-----------------------------------------------------------------------------
 # MITK Packages
 #-----------------------------------------------------------------------------
 
 set(MITK_MODULES_PACKAGE_DEPENDS_DIR ${MITK_SOURCE_DIR}/CMake/PackageDepends)
 set(MODULES_PACKAGE_DEPENDS_DIRS ${MITK_MODULES_PACKAGE_DEPENDS_DIR})
 
 foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
   set(MITK_PACKAGE_DEPENDS_EXTENSION_DIR "${MITK_EXTENSION_DIR}/CMake/PackageDepends")
   if(EXISTS "${MITK_PACKAGE_DEPENDS_EXTENSION_DIR}")
     list(APPEND MODULES_PACKAGE_DEPENDS_DIRS "${MITK_PACKAGE_DEPENDS_EXTENSION_DIR}")
   endif()
 endforeach()
 
 if(NOT MITK_USE_SYSTEM_Boost)
   set(Boost_NO_SYSTEM_PATHS 1)
 endif()
 
 set(Boost_USE_MULTITHREADED 1)
 set(Boost_USE_STATIC_LIBS 0)
 set(Boost_USE_STATIC_RUNTIME 0)
 set(Boost_ADDITIONAL_VERSIONS 1.74 1.74.0)
 
 # We need this later for a DCMTK workaround
 set(_dcmtk_dir_orig ${DCMTK_DIR})
 
 # This property is populated at the top half of this file
 get_property(MITK_EXTERNAL_PROJECTS GLOBAL PROPERTY MITK_EXTERNAL_PROJECTS)
 foreach(ep ${MITK_EXTERNAL_PROJECTS})
   get_property(_package GLOBAL PROPERTY MITK_${ep}_PACKAGE)
   get_property(_components GLOBAL PROPERTY MITK_${ep}_COMPONENTS)
   if(MITK_USE_${ep} AND _package)
     if(_components)
       find_package(${_package} COMPONENTS ${_components} REQUIRED CONFIG)
     else()
       # Prefer config mode first because it finds external
       # <proj>Config.cmake files pointed at by <proj>_DIR variables.
       # Otherwise, existing Find<proj>.cmake files could fail.
 
       if(DEFINED ${_package}_DIR)
         #we store the information because it will be overwritten by find_package
         #and would get lost for all EPs that use on Find<proj>.cmake instead of config
         #files.
         set(_temp_EP_${_package}_dir ${${_package}_DIR})
       endif(DEFINED ${_package}_DIR)
 
       find_package(${_package} QUIET CONFIG)
       string(TOUPPER "${_package}" _package_uc)
       if(NOT (${_package}_FOUND OR ${_package_uc}_FOUND))
         if(DEFINED _temp_EP_${_package}_dir)
             set(${_package}_DIR ${_temp_EP_${_package}_dir} CACHE PATH "externaly set dir of the package ${_package}" FORCE)
         endif(DEFINED _temp_EP_${_package}_dir)
 
         find_package(${_package} REQUIRED)
       endif()
     endif()
   endif()
 endforeach()
 
 # Ensure that the MITK CMake module path comes first
 set(CMAKE_MODULE_PATH
   ${MITK_CMAKE_DIR}
   ${CMAKE_MODULE_PATH}
   )
 
 if(MITK_USE_DCMTK)
   if(${_dcmtk_dir_orig} MATCHES "${MITK_EXTERNAL_PROJECT_PREFIX}.*")
     # Help our FindDCMTK.cmake script find our super-build DCMTK
     set(DCMTK_DIR ${MITK_EXTERNAL_PROJECT_PREFIX})
   else()
     # Use the original value
     set(DCMTK_DIR ${_dcmtk_dir_orig})
   endif()
 endif()
 
 if(MITK_USE_DCMQI)
   # Due to the preferred CONFIG mode in find_package calls above,
   # the DCMQIConfig.cmake file is read, which does not provide useful
   # package information. We explictly need MODULE mode to find DCMQI.
     # Help our FindDCMQI.cmake script find our super-build DCMQI
   set(DCMQI_DIR ${MITK_EXTERNAL_PROJECT_PREFIX})
   find_package(DCMQI REQUIRED)
 endif()
 
 if(MITK_USE_OpenMP)
   find_package(OpenMP REQUIRED COMPONENTS CXX)
 else()
   find_package(OpenMP QUIET COMPONENTS CXX)
 
   if(OpenMP_FOUND)
     set(MITK_USE_OpenMP ON CACHE BOOL "" FORCE)
   elseif(APPLE AND OpenMP_libomp_LIBRARY AND NOT OpenMP_CXX_LIB_NAMES)
     set(OpenMP_CXX_LIB_NAMES libomp CACHE STRING "" FORCE)
     get_filename_component(openmp_lib_dir "${OpenMP_libomp_LIBRARY}" DIRECTORY)
     set(openmp_include_dir "${openmp_lib_dir}/../include")
     if(EXISTS "${openmp_include_dir}")
       get_filename_component(openmp_include_dir "${openmp_include_dir}" REALPATH)
       set(OpenMP_CXX_FLAGS "-Xpreprocessor -fopenmp -I${openmp_include_dir}" CACHE STRING "" FORCE)
       find_package(OpenMP QUIET COMPONENTS CXX)
       if(OpenMP_FOUND)
         set(MITK_USE_OpenMP ON CACHE BOOL "" FORCE)
       endif()
     endif()
   endif()
 endif()
 
 # Qt support
 if(MITK_USE_Qt6)
   if(MITK_USE_BLUEBERRY)
     option(BLUEBERRY_USE_QT_HELP "Enable support for integrating plugin documentation into Qt Help" ${DOXYGEN_FOUND})
     mark_as_advanced(BLUEBERRY_USE_QT_HELP)
 
     # Sanity checks for in-application BlueBerry plug-in help generation
     if(BLUEBERRY_USE_QT_HELP)
       set(_force_blueberry_use_qt_help_to_off 0)
       if(NOT DOXYGEN_FOUND)
         message("> Forcing BLUEBERRY_USE_QT_HELP to OFF because Doxygen was not found.")
         set(_force_blueberry_use_qt_help_to_off 1)
       endif()
       if(DOXYGEN_FOUND AND DOXYGEN_VERSION VERSION_LESS 1.8.7)
         message("> Forcing BLUEBERRY_USE_QT_HELP to OFF because Doxygen version 1.8.7 or newer not found.")
         set(_force_blueberry_use_qt_help_to_off 1)
       endif()
 
       if(NOT QT_HELPGENERATOR_EXECUTABLE)
         message("> Forcing BLUEBERRY_USE_QT_HELP to OFF because QT_HELPGENERATOR_EXECUTABLE is empty.")
         set(_force_blueberry_use_qt_help_to_off 1)
       endif()
 
       if(NOT MITK_USE_Qt6)
         message("> Forcing BLUEBERRY_USE_QT_HELP to OFF because MITK_USE_Qt6 is OFF.")
         set(_force_blueberry_use_qt_help_to_off 1)
       endif()
 
       if(_force_blueberry_use_qt_help_to_off)
         set(BLUEBERRY_USE_QT_HELP OFF CACHE BOOL "Enable support for integrating plugin documentation into Qt Help" FORCE)
       endif()
     endif()
 
     if(BLUEBERRY_QT_HELP_REQUIRED AND NOT BLUEBERRY_USE_QT_HELP)
       message(FATAL_ERROR "BLUEBERRY_USE_QT_HELP is required to be set to ON")
     endif()
   endif()
 
 endif()
 
 #-----------------------------------------------------------------------------
 # Testing
 #-----------------------------------------------------------------------------
 
 if(BUILD_TESTING)
   # Configuration for the CMake-generated test driver
   set(CMAKE_TESTDRIVER_EXTRA_INCLUDES "#include <stdexcept>")
   set(CMAKE_TESTDRIVER_BEFORE_TESTMAIN "
     try
       {")
   set(CMAKE_TESTDRIVER_AFTER_TESTMAIN "
       }
       catch (const std::exception& e)
       {
         fprintf(stderr, \"%s\\n\", e.what());
         return EXIT_FAILURE;
       }
       catch (...)
       {
         printf(\"Exception caught in the test driver\\n\");
         return EXIT_FAILURE;
       }")
 
   set(MITK_TEST_OUTPUT_DIR "${MITK_BINARY_DIR}/test_output")
   if(NOT EXISTS ${MITK_TEST_OUTPUT_DIR})
     file(MAKE_DIRECTORY ${MITK_TEST_OUTPUT_DIR})
   endif()
 
   # Test the package target
   include(mitkPackageTest)
 endif()
 
 configure_file(mitkTestingConfig.h.in ${MITK_BINARY_DIR}/mitkTestingConfig.h)
 
 #-----------------------------------------------------------------------------
 # MITK_SUPERBUILD_BINARY_DIR
 #-----------------------------------------------------------------------------
 
 # If MITK_SUPERBUILD_BINARY_DIR isn't defined, it means MITK is *NOT* build using Superbuild.
 # In that specific case, MITK_SUPERBUILD_BINARY_DIR should default to MITK_BINARY_DIR
 if(NOT DEFINED MITK_SUPERBUILD_BINARY_DIR)
   set(MITK_SUPERBUILD_BINARY_DIR ${MITK_BINARY_DIR})
 endif()
 
 #-----------------------------------------------------------------------------
 # Set C/CXX and linker flags for MITK code
 #-----------------------------------------------------------------------------
 
 set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${MITK_CXX_FLAGS}")
 set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} ${MITK_CXX_FLAGS_DEBUG}")
 set(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} ${MITK_CXX_FLAGS_RELEASE}")
 set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${MITK_C_FLAGS}")
 set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} ${MITK_C_FLAGS_DEBUG}")
 set(CMAKE_C_FLAGS_RELEASE "${CMAKE_C_FLAGS_RELEASE} ${MITK_C_FLAGS_RELEASE}")
 
 set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${MITK_EXE_LINKER_FLAGS}")
 set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} ${MITK_SHARED_LINKER_FLAGS}")
 set(CMAKE_MODULE_LINKER_FLAGS "${CMAKE_MODULE_LINKER_FLAGS} ${MITK_MODULE_LINKER_FLAGS}")
 
 #-----------------------------------------------------------------------------
 # Add subdirectories
 #-----------------------------------------------------------------------------
 
 add_subdirectory(Utilities)
 
 add_subdirectory(Modules)
 
 include("${CMAKE_CURRENT_SOURCE_DIR}/Modules/ModuleList.cmake")
 mitkFunctionWhitelistModules(MITK MITK_MODULES)
 
 set(MITK_ROOT_FOLDER_BACKUP "${MITK_ROOT_FOLDER}")
 foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
   get_filename_component(MITK_ROOT_FOLDER "${MITK_EXTENSION_DIR}" NAME)
   set(MITK_MODULES_EXTENSION_DIR "${MITK_EXTENSION_DIR}/Modules")
   if(EXISTS "${MITK_MODULES_EXTENSION_DIR}/ModuleList.cmake")
     set(MITK_MODULES "")
     include("${MITK_MODULES_EXTENSION_DIR}/ModuleList.cmake")
     foreach(mitk_module ${MITK_MODULES})
       add_subdirectory("${MITK_MODULES_EXTENSION_DIR}/${mitk_module}" "Modules/${mitk_module}")
     endforeach()
   endif()
   set(MITK_MODULE_NAME_PREFIX ${MITK_DEFAULT_MODULE_NAME_PREFIX})
 endforeach()
 set(MITK_ROOT_FOLDER "${MITK_ROOT_FOLDER_BACKUP}")
 
 add_subdirectory(Wrapping)
 
 set(MITK_DOXYGEN_OUTPUT_DIR "${PROJECT_BINARY_DIR}/Documentation/Doxygen" CACHE PATH
   "Output directory for doxygen generated documentation.")
 
 if(MITK_USE_BLUEBERRY)
   include("${CMAKE_CURRENT_SOURCE_DIR}/Plugins/PluginList.cmake")
   mitkFunctionWhitelistPlugins(MITK MITK_PLUGINS)
 
   set(mitk_plugins_fullpath "")
   foreach(mitk_plugin ${MITK_PLUGINS})
     list(APPEND mitk_plugins_fullpath Plugins/${mitk_plugin})
   endforeach()
 
   set(MITK_PLUGIN_REGEX_LIST "")
   foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
     set(MITK_PLUGINS_EXTENSION_DIR "${MITK_EXTENSION_DIR}/Plugins")
     if(EXISTS "${MITK_PLUGINS_EXTENSION_DIR}/PluginList.cmake")
       set(MITK_PLUGINS "")
       include("${MITK_PLUGINS_EXTENSION_DIR}/PluginList.cmake")
       foreach(mitk_plugin ${MITK_PLUGINS})
         list(APPEND mitk_plugins_fullpath "${MITK_PLUGINS_EXTENSION_DIR}/${mitk_plugin}")
       endforeach()
     endif()
   endforeach()
 
   if(EXISTS ${MITK_PRIVATE_MODULES}/PluginList.cmake)
     include(${MITK_PRIVATE_MODULES}/PluginList.cmake)
 
     foreach(mitk_plugin ${MITK_PRIVATE_PLUGINS})
       list(APPEND mitk_plugins_fullpath ${MITK_PRIVATE_MODULES}/${mitk_plugin})
     endforeach()
   endif()
 
   if(MITK_BUILD_EXAMPLES)
     include("${CMAKE_CURRENT_SOURCE_DIR}/Examples/Plugins/PluginList.cmake")
     set(mitk_example_plugins_fullpath )
     foreach(mitk_example_plugin ${MITK_EXAMPLE_PLUGINS})
       list(APPEND mitk_example_plugins_fullpath Examples/Plugins/${mitk_example_plugin})
       list(APPEND mitk_plugins_fullpath Examples/Plugins/${mitk_example_plugin})
     endforeach()
   endif()
 
   # Specify which plug-ins belong to this project
   macro(GetMyTargetLibraries all_target_libraries varname)
     set(re_ctkplugin_mitk "^org_mitk_[a-zA-Z0-9_]+$")
     set(re_ctkplugin_bb "^org_blueberry_[a-zA-Z0-9_]+$")
     set(_tmp_list)
     list(APPEND _tmp_list ${all_target_libraries})
     ctkMacroListFilter(_tmp_list re_ctkplugin_mitk re_ctkplugin_bb MITK_PLUGIN_REGEX_LIST OUTPUT_VARIABLE ${varname})
   endmacro()
 
   # Get infos about application directories and build options
   set(mitk_apps_fullpath "")
   foreach(MITK_EXTENSION_DIR ${MITK_DIR_PLUS_EXTENSION_DIRS})
     set(MITK_APPLICATIONS_EXTENSION_DIR "${MITK_EXTENSION_DIR}/Applications")
     if(EXISTS "${MITK_APPLICATIONS_EXTENSION_DIR}/AppList.cmake")
       set(MITK_APPS "")
       include("${MITK_APPLICATIONS_EXTENSION_DIR}/AppList.cmake")
       foreach(mitk_app ${MITK_APPS})
         # extract option_name
         string(REPLACE "^^" "\\;" target_info ${mitk_app})
         set(target_info_list ${target_info})
         list(GET target_info_list 0 directory_name)
         list(GET target_info_list 1 option_name)
         if(${option_name})
           list(APPEND mitk_apps_fullpath "${MITK_APPLICATIONS_EXTENSION_DIR}/${directory_name}^^${option_name}")
         endif()
       endforeach()
     endif()
   endforeach()
 
   if (mitk_plugins_fullpath)
     ctkMacroSetupPlugins(${mitk_plugins_fullpath}
                          BUILD_OPTION_PREFIX MITK_BUILD_
                          APPS ${mitk_apps_fullpath}
                          BUILD_ALL ${MITK_BUILD_ALL_PLUGINS}
                          COMPACT_OPTIONS)
   endif()
 
   set(MITK_PLUGIN_USE_FILE "${MITK_BINARY_DIR}/MitkPluginUseFile.cmake")
   if(${PROJECT_NAME}_PLUGIN_LIBRARIES)
     ctkFunctionGeneratePluginUseFile(${MITK_PLUGIN_USE_FILE})
   else()
     file(REMOVE ${MITK_PLUGIN_USE_FILE})
     set(MITK_PLUGIN_USE_FILE )
   endif()
 endif()
 
 #-----------------------------------------------------------------------------
 # Documentation
 #-----------------------------------------------------------------------------
 
 set(MITK_DOXYGEN_ADDITIONAL_INPUT_DIRS)
 set(MITK_DOXYGEN_ADDITIONAL_IMAGE_PATHS)
 set(MITK_DOXYGEN_ADDITIONAL_EXAMPLE_PATHS)
 
 foreach(MITK_EXTENSION_DIR ${MITK_DIR_PLUS_EXTENSION_DIRS})
   set(MITK_DOXYGEN_ADDITIONAL_INPUT_DIRS "${MITK_DOXYGEN_ADDITIONAL_INPUT_DIRS} \"${MITK_EXTENSION_DIR}\"")
   set(MITK_DOXYGEN_ADDITIONAL_IMAGE_PATHS "${MITK_DOXYGEN_ADDITIONAL_IMAGE_PATHS} \"${MITK_EXTENSION_DIR}\"")
   # MITK_DOXYGEN_ADDITIONAL_EXAMPLE_PATHS should be modified by MITK extensions as needed
 endforeach()
 
 if(DOXYGEN_FOUND)
   foreach(MITK_EXTENSION_DIR ${MITK_DIR_PLUS_EXTENSION_DIRS})
     set(MITK_DOCUMENTATION_EXTENSION_DIR "${MITK_EXTENSION_DIR}/Documentation")
     file(GLOB MITK_DOCUMENTATION_EXTENSION_FILES CONFIGURE_DEPENDS "${MITK_DOCUMENTATION_EXTENSION_DIR}/*.cmake")
     foreach(doc_file ${MITK_DOCUMENTATION_EXTENSION_FILES})
       include("${doc_file}")
     endforeach()
   endforeach()
 
   # Transform list of example paths into space-separated string of quoted paths
   unset(example_paths)
   foreach(example_path ${MITK_DOXYGEN_ADDITIONAL_EXAMPLE_PATHS})
     set(example_paths "${example_paths} \"${example_path}\"")
   endforeach()
   set(MITK_DOXYGEN_ADDITIONAL_EXAMPLE_PATHS "${example_paths}")
 
   add_subdirectory(Documentation)
 endif()
 
 #-----------------------------------------------------------------------------
 # Installation
 #-----------------------------------------------------------------------------
 
 
 # set MITK cpack variables
 # These are the default variables, which can be overwritten ( see below )
 include(mitkSetupCPack)
 
 set(use_default_config ON)
 
 set(ALL_MITK_APPS "")
 set(activated_apps_no 0)
 
 foreach(MITK_EXTENSION_DIR ${MITK_DIR_PLUS_EXTENSION_DIRS})
   set(MITK_APPLICATIONS_EXTENSION_DIR "${MITK_EXTENSION_DIR}/Applications")
   if(EXISTS "${MITK_APPLICATIONS_EXTENSION_DIR}/AppList.cmake")
     set(MITK_APPS "")
     include("${MITK_APPLICATIONS_EXTENSION_DIR}/AppList.cmake")
     foreach(mitk_app ${MITK_APPS})
       string(REPLACE "^^" "\\;" target_info ${mitk_app})
       set(target_info_list ${target_info})
       list(GET target_info_list 0 directory_name)
       list(GET target_info_list 1 option_name)
       list(GET target_info_list 2 executable_name)
       list(APPEND ALL_MITK_APPS "${MITK_EXTENSION_DIR}/Applications/${directory_name}^^${option_name}^^${executable_name}")
       if(${option_name} OR MITK_BUILD_ALL_APPS)
         MATH(EXPR activated_apps_no "${activated_apps_no} + 1")
       endif()
     endforeach()
   endif()
 endforeach()
 
 list(LENGTH ALL_MITK_APPS app_count)
 
 if(app_count EQUAL 1 AND (activated_apps_no EQUAL 1 OR MITK_BUILD_ALL_APPS))
   # Corner case if there is only one app in total
   set(use_project_cpack ON)
 elseif(activated_apps_no EQUAL 1 AND NOT MITK_BUILD_ALL_APPS)
   # Only one app is enabled (no "build all" flag set)
   set(use_project_cpack ON)
 else()
   # Less or more then one app is enabled
   set(use_project_cpack OFF)
 endif()
 
 foreach(mitk_app ${ALL_MITK_APPS})
   # extract target_dir and option_name
   string(REPLACE "^^" "\\;" target_info ${mitk_app})
   set(target_info_list ${target_info})
   list(GET target_info_list 0 target_dir)
   list(GET target_info_list 1 option_name)
   list(GET target_info_list 2 executable_name)
   # check if the application is enabled
   if(${option_name} OR MITK_BUILD_ALL_APPS)
     # check whether application specific configuration files will be used
     if(use_project_cpack)
       # use files if they exist
       if(EXISTS "${target_dir}/CPackOptions.cmake")
         include("${target_dir}/CPackOptions.cmake")
       endif()
 
       if(EXISTS "${target_dir}/CPackConfig.cmake.in")
         set(CPACK_PROJECT_CONFIG_FILE "${target_dir}/CPackConfig.cmake")
         configure_file(${target_dir}/CPackConfig.cmake.in
                        ${CPACK_PROJECT_CONFIG_FILE} @ONLY)
         set(use_default_config OFF)
       endif()
     endif()
   # add link to the list
   list(APPEND CPACK_CREATE_DESKTOP_LINKS "${executable_name}")
   endif()
 endforeach()
 
 # if no application specific configuration file was used, use default
 if(use_default_config)
   configure_file(${MITK_SOURCE_DIR}/MITKCPackOptions.cmake.in
                  ${MITK_BINARY_DIR}/MITKCPackOptions.cmake @ONLY)
   set(CPACK_PROJECT_CONFIG_FILE "${MITK_BINARY_DIR}/MITKCPackOptions.cmake")
 endif()
 
 # include CPack model once all variables are set
 include(CPack)
 
 # Additional installation rules
 include(mitkInstallRules)
 
 #-----------------------------------------------------------------------------
 # Last configuration steps
 #-----------------------------------------------------------------------------
 
 # ---------------- Export targets -----------------
 
 set(MITK_EXPORTS_FILE "${MITK_BINARY_DIR}/MitkExports.cmake")
 file(REMOVE ${MITK_EXPORTS_FILE})
 
 set(targets_to_export)
 get_property(module_targets GLOBAL PROPERTY MITK_MODULE_TARGETS)
 if(module_targets)
   list(APPEND targets_to_export ${module_targets})
 endif()
 
 if(MITK_USE_BLUEBERRY)
   if(MITK_PLUGIN_LIBRARIES)
     list(APPEND targets_to_export ${MITK_PLUGIN_LIBRARIES})
   endif()
 endif()
 
 export(TARGETS ${targets_to_export} APPEND
        FILE ${MITK_EXPORTS_FILE})
 
 set(MITK_EXPORTED_TARGET_PROPERTIES )
 foreach(target_to_export ${targets_to_export})
   get_target_property(autoload_targets ${target_to_export} MITK_AUTOLOAD_TARGETS)
   if(autoload_targets)
     set(MITK_EXPORTED_TARGET_PROPERTIES "${MITK_EXPORTED_TARGET_PROPERTIES}
 set_target_properties(${target_to_export} PROPERTIES MITK_AUTOLOAD_TARGETS \"${autoload_targets}\")")
   endif()
   get_target_property(autoload_dir ${target_to_export} MITK_AUTOLOAD_DIRECTORY)
   if(autoload_dir)
     set(MITK_EXPORTED_TARGET_PROPERTIES "${MITK_EXPORTED_TARGET_PROPERTIES}
 set_target_properties(${target_to_export} PROPERTIES MITK_AUTOLOAD_DIRECTORY \"${autoload_dir}\")")
   endif()
 
   get_target_property(deprecated_module ${target_to_export} MITK_MODULE_DEPRECATED_SINCE)
   if(deprecated_module)
     set(MITK_EXPORTED_TARGET_PROPERTIES "${MITK_EXPORTED_TARGET_PROPERTIES}
 set_target_properties(${target_to_export} PROPERTIES MITK_MODULE_DEPRECATED_SINCE \"${deprecated_module}\")")
   endif()
 endforeach()
 
 # ---------------- External projects -----------------
 
 get_property(MITK_ADDITIONAL_LIBRARY_SEARCH_PATHS_CONFIG GLOBAL PROPERTY MITK_ADDITIONAL_LIBRARY_SEARCH_PATHS)
 
 set(MITK_CONFIG_EXTERNAL_PROJECTS )
 #string(REPLACE "^^" ";" _mitk_external_projects ${MITK_EXTERNAL_PROJECTS})
 
 foreach(ep ${MITK_EXTERNAL_PROJECTS})
   get_property(_components GLOBAL PROPERTY MITK_${ep}_COMPONENTS)
   set(MITK_CONFIG_EXTERNAL_PROJECTS "${MITK_CONFIG_EXTERNAL_PROJECTS}
 set(MITK_USE_${ep} ${MITK_USE_${ep}})
 set(MITK_${ep}_DIR \"${${ep}_DIR}\")
 set(MITK_${ep}_COMPONENTS ${_components})
 ")
 endforeach()
 
 foreach(ep ${MITK_EXTERNAL_PROJECTS})
   get_property(_package GLOBAL PROPERTY MITK_${ep}_PACKAGE)
   get_property(_components GLOBAL PROPERTY MITK_${ep}_COMPONENTS)
   if(_components)
       set(_components_arg COMPONENTS \${_components})
   else()
     set(_components_arg)
   endif()
 
   if(_package)
     set(MITK_CONFIG_EXTERNAL_PROJECTS "${MITK_CONFIG_EXTERNAL_PROJECTS}
 if(MITK_USE_${ep})
   set(${ep}_DIR \${MITK_${ep}_DIR})
   if(MITK_${ep}_COMPONENTS)
     mitkMacroFindDependency(${_package} COMPONENTS \${MITK_${ep}_COMPONENTS})
   else()
     mitkMacroFindDependency(${_package})
   endif()
 endif()")
   endif()
 endforeach()
 
 
 # ---------------- Tools -----------------
 
 configure_file(${MITK_SOURCE_DIR}/CMake/ToolExtensionITKFactory.cpp.in
                ${MITK_BINARY_DIR}/ToolExtensionITKFactory.cpp.in COPYONLY)
 configure_file(${MITK_SOURCE_DIR}/CMake/ToolExtensionITKFactoryLoader.cpp.in
                ${MITK_BINARY_DIR}/ToolExtensionITKFactoryLoader.cpp.in COPYONLY)
 configure_file(${MITK_SOURCE_DIR}/CMake/ToolGUIExtensionITKFactory.cpp.in
                ${MITK_BINARY_DIR}/ToolGUIExtensionITKFactory.cpp.in COPYONLY)
 
 # ---------------- Configure files -----------------
 
 configure_file(mitkVersion.h.in ${MITK_BINARY_DIR}/mitkVersion.h)
 configure_file(mitkConfig.h.in ${MITK_BINARY_DIR}/mitkConfig.h)
 
 set(IPFUNC_INCLUDE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/Utilities/ipFunc)
 set(UTILITIES_DIR ${CMAKE_CURRENT_SOURCE_DIR}/Utilities)
 
 configure_file(mitkConfig.h.in ${MITK_BINARY_DIR}/mitkConfig.h)
 configure_file(MITKConfig.cmake.in ${MITK_BINARY_DIR}/MITKConfig.cmake @ONLY)
 
 write_basic_config_version_file(${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}ConfigVersion.cmake
   VERSION ${MITK_VERSION_STRING} COMPATIBILITY AnyNewerVersion)
 
 #-----------------------------------------------------------------------------
 # MITK Applications
 #-----------------------------------------------------------------------------
 
 # This must come after MITKConfig.h was generated, since applications
 # might do a find_package(MITK REQUIRED).
 add_subdirectory(Applications)
 
 if(MSVC AND TARGET MitkWorkbench)
   set_directory_properties(PROPERTIES VS_STARTUP_PROJECT MitkWorkbench)
 endif()
 
 foreach(MITK_EXTENSION_DIR ${MITK_ABSOLUTE_EXTENSION_DIRS})
   set(MITK_APPLICATIONS_EXTENSION_DIR "${MITK_EXTENSION_DIR}/Applications")
   if(EXISTS "${MITK_APPLICATIONS_EXTENSION_DIR}/CMakeLists.txt")
     add_subdirectory("${MITK_APPLICATIONS_EXTENSION_DIR}" "Applications")
   endif()
 endforeach()
 
 #-----------------------------------------------------------------------------
 # MITK Examples
 #-----------------------------------------------------------------------------
 
 if(MITK_BUILD_EXAMPLES)
   # This must come after MITKConfig.h was generated, since applications
   # might do a find_package(MITK REQUIRED).
   add_subdirectory(Examples)
 endif()
 
 #-----------------------------------------------------------------------------
 # Print configuration summary
 #-----------------------------------------------------------------------------
 
 message("\n\n")
 feature_summary(
   DESCRIPTION "------- FEATURE SUMMARY FOR ${PROJECT_NAME} -------"
   WHAT ALL
 )