diff --git a/Modules/Core/src/mitkCoreActivator.cpp b/Modules/Core/src/mitkCoreActivator.cpp index 17a64bf8ae..a181bb1316 100644 --- a/Modules/Core/src/mitkCoreActivator.cpp +++ b/Modules/Core/src/mitkCoreActivator.cpp @@ -1,321 +1,357 @@ /*============================================================================ The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center (DKFZ) All rights reserved. Use of this source code is governed by a 3-clause BSD license that can be found in the LICENSE file. ============================================================================*/ #include "mitkCoreActivator.h" +#include +#include + // File IO +#include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include "mitkLegacyFileWriterService.h" #include #include #include // Micro Services #include #include #include #include #include #include #include #include #include #include // ITK "injects" static initialization code for IO factories // via the itkImageIOFactoryRegisterManager.h header (which // is generated in the application library build directory). // To ensure that the code is called *before* the CppMicroServices // static initialization code (which triggers the Activator::Start // method), we include the ITK header here. #include void HandleMicroServicesMessages(us::MsgType type, const char *msg) { switch (type) { case us::DebugMsg: MITK_DEBUG << msg; break; case us::InfoMsg: MITK_INFO << msg; break; case us::WarningMsg: MITK_WARN << msg; break; case us::ErrorMsg: MITK_ERROR << msg; break; } } void AddMitkAutoLoadPaths(const std::string &programPath) { us::ModuleSettings::AddAutoLoadPath(programPath); #ifdef __APPLE__ // Walk up three directories since that is where the .dylib files are located // for build trees. std::string additionalPath = programPath; bool addPath = true; for (int i = 0; i < 3; ++i) { std::size_t index = additionalPath.find_last_of('/'); if (index != std::string::npos) { additionalPath = additionalPath.substr(0, index); } else { addPath = false; break; } } if (addPath) { us::ModuleSettings::AddAutoLoadPath(additionalPath); } #endif } +void AddPropertyPersistence(const mitk::PropertyKeyPath& propPath) +{ + mitk::CoreServicePointer persistenceService(mitk::CoreServices::GetPropertyPersistence()); + + mitk::PropertyPersistenceInfo::Pointer info = mitk::PropertyPersistenceInfo::New(); + if (propPath.IsExplicit()) + { + std::string name = mitk::PropertyKeyPathToPropertyName(propPath); + std::string key = name; + std::replace(key.begin(), key.end(), '.', '_'); + info->SetNameAndKey(name, key); + } + else + { + std::string key = mitk::PropertyKeyPathToPersistenceKeyRegEx(propPath); + std::string keyTemplate = mitk::PropertyKeyPathToPersistenceKeyTemplate(propPath); + std::string propRegEx = mitk::PropertyKeyPathToPropertyRegEx(propPath); + std::string propTemplate = mitk::PropertyKeyPathToPersistenceNameTemplate(propPath); + info->UseRegEx(propRegEx, propTemplate, key, keyTemplate); + } + + persistenceService->AddInfo(info); +} + class FixedNiftiImageIO : public itk::NiftiImageIO { public: /** Standard class typedefs. */ typedef FixedNiftiImageIO Self; typedef itk::NiftiImageIO Superclass; typedef itk::SmartPointer Pointer; /** Method for creation through the object factory. */ itkNewMacro(Self) /** Run-time type information (and related methods). */ itkTypeMacro(FixedNiftiImageIO, Superclass) bool SupportsDimension(unsigned long dim) override { return dim > 1 && dim < 5; } }; void MitkCoreActivator::Load(us::ModuleContext *context) { // Handle messages from CppMicroServices us::installMsgHandler(HandleMicroServicesMessages); this->m_Context = context; // Add the current application directory to the auto-load paths. // This is useful for third-party executables. std::string programPath = mitk::IOUtil::GetProgramPath(); if (programPath.empty()) { MITK_WARN << "Could not get the program path."; } else { AddMitkAutoLoadPaths(programPath); } // m_RenderingManager = mitk::RenderingManager::New(); // context->RegisterService(renderingManager.GetPointer()); m_PlanePositionManager.reset(new mitk::PlanePositionManagerService); context->RegisterService(m_PlanePositionManager.get()); m_PropertyAliases.reset(new mitk::PropertyAliases); context->RegisterService(m_PropertyAliases.get()); m_PropertyDescriptions.reset(new mitk::PropertyDescriptions); context->RegisterService(m_PropertyDescriptions.get()); m_PropertyExtensions.reset(new mitk::PropertyExtensions); context->RegisterService(m_PropertyExtensions.get()); m_PropertyFilters.reset(new mitk::PropertyFilters); context->RegisterService(m_PropertyFilters.get()); m_PropertyPersistence.reset(new mitk::PropertyPersistence); context->RegisterService(m_PropertyPersistence.get()); m_PropertyRelations.reset(new mitk::PropertyRelations); context->RegisterService(m_PropertyRelations.get()); m_MimeTypeProvider.reset(new mitk::MimeTypeProvider); m_MimeTypeProvider->Start(); m_MimeTypeProviderReg = context->RegisterService(m_MimeTypeProvider.get()); this->RegisterDefaultMimeTypes(); this->RegisterItkReaderWriter(); this->RegisterVtkReaderWriter(); // Add custom Reader / Writer Services m_FileReaders.push_back(new mitk::PointSetReaderService()); m_FileWriters.push_back(new mitk::PointSetWriterService()); m_FileReaders.push_back(new mitk::GeometryDataReaderService()); m_FileWriters.push_back(new mitk::GeometryDataWriterService()); m_FileReaders.push_back(new mitk::RawImageFileReaderService()); + //add properties that should be persistent (if possible/supported by the writer) + AddPropertyPersistence(mitk::IOMetaInformationPropertyConsants::READER_DESCRIPTION()); + AddPropertyPersistence(mitk::IOMetaInformationPropertyConsants::READER_INPUTLOCATION()); + AddPropertyPersistence(mitk::IOMetaInformationPropertyConsants::READER_MIME_CATEGORY()); + AddPropertyPersistence(mitk::IOMetaInformationPropertyConsants::READER_MIME_NAME()); + AddPropertyPersistence(mitk::IOMetaInformationPropertyConsants::READER_VERSION()); + AddPropertyPersistence(mitk::IOMetaInformationPropertyConsants::READER_OPTIONS_ANY()); + /* There IS an option to exchange ALL vtkTexture instances against vtkNeverTranslucentTextureFactory. This code is left here as a reminder, just in case we might need to do that some time. vtkNeverTranslucentTextureFactory* textureFactory = vtkNeverTranslucentTextureFactory::New(); vtkObjectFactory::RegisterFactory( textureFactory ); textureFactory->Delete(); */ this->RegisterLegacyWriter(); } void MitkCoreActivator::Unload(us::ModuleContext *) { for (auto &elem : m_FileReaders) { delete elem; } for (auto &elem : m_FileWriters) { delete elem; } for (auto &elem : m_FileIOs) { delete elem; } for (auto &elem : m_LegacyWriters) { delete elem; } // The mitk::ModuleContext* argument of the Unload() method // will always be 0 for the Mitk library. It makes no sense // to use it at this stage anyway, since all libraries which // know about the module system have already been unloaded. // we need to close the internal service tracker of the // MimeTypeProvider class here. Otherwise it // would hold on to the ModuleContext longer than it is // actually valid. m_MimeTypeProviderReg.Unregister(); m_MimeTypeProvider->Stop(); for (std::vector::const_iterator mimeTypeIter = m_DefaultMimeTypes.begin(), iterEnd = m_DefaultMimeTypes.end(); mimeTypeIter != iterEnd; ++mimeTypeIter) { delete *mimeTypeIter; } } void MitkCoreActivator::RegisterDefaultMimeTypes() { // Register some default mime-types std::vector mimeTypes = mitk::IOMimeTypes::Get(); for (std::vector::const_iterator mimeTypeIter = mimeTypes.begin(), iterEnd = mimeTypes.end(); mimeTypeIter != iterEnd; ++mimeTypeIter) { m_DefaultMimeTypes.push_back(*mimeTypeIter); m_Context->RegisterService(m_DefaultMimeTypes.back()); } } void MitkCoreActivator::RegisterItkReaderWriter() { std::list allobjects = itk::ObjectFactoryBase::CreateAllInstance("itkImageIOBase"); for (auto &allobject : allobjects) { auto *io = dynamic_cast(allobject.GetPointer()); // NiftiImageIO does not provide a correct "SupportsDimension()" methods // and the supported read/write extensions are not ordered correctly if (dynamic_cast(io)) continue; // Use a custom mime-type for GDCMImageIO below if (dynamic_cast(allobject.GetPointer())) { // MITK provides its own DICOM reader (which internally uses GDCMImageIO). continue; } if (io) { m_FileIOs.push_back(new mitk::ItkImageIO(io)); } else { MITK_WARN << "Error ImageIO factory did not return an ImageIOBase: " << (allobject)->GetNameOfClass(); } } FixedNiftiImageIO::Pointer itkNiftiIO = FixedNiftiImageIO::New(); mitk::ItkImageIO *niftiIO = new mitk::ItkImageIO(mitk::IOMimeTypes::NIFTI_MIMETYPE(), itkNiftiIO.GetPointer(), 0); m_FileIOs.push_back(niftiIO); } void MitkCoreActivator::RegisterVtkReaderWriter() { m_FileIOs.push_back(new mitk::SurfaceVtkXmlIO()); m_FileIOs.push_back(new mitk::SurfaceStlIO()); m_FileIOs.push_back(new mitk::SurfaceVtkLegacyIO()); m_FileIOs.push_back(new mitk::ImageVtkXmlIO()); m_FileIOs.push_back(new mitk::ImageVtkLegacyIO()); } void MitkCoreActivator::RegisterLegacyWriter() { std::list allobjects = itk::ObjectFactoryBase::CreateAllInstance("IOWriter"); for (auto i = allobjects.begin(); i != allobjects.end(); ++i) { mitk::FileWriter::Pointer io = dynamic_cast(i->GetPointer()); if (io) { std::string description = std::string("Legacy ") + io->GetNameOfClass() + " Writer"; mitk::IFileWriter *writer = new mitk::LegacyFileWriterService(io, description); m_LegacyWriters.push_back(writer); } else { MITK_ERROR << "Error IOWriter override is not of type mitk::FileWriter: " << (*i)->GetNameOfClass() << std::endl; } } } US_EXPORT_MODULE_ACTIVATOR(MitkCoreActivator) // Call CppMicroservices initialization code at the end of the file. // This especially ensures that VTK object factories have already // been registered (VTK initialization code is injected by implicitly // include VTK header files at the top of this file). US_INITIALIZE_MODULE