diff --git a/Core/Code/DataManagement/mitkOldTypeConversions.h b/Core/Code/DataManagement/mitkOldTypeConversions.h index cd29efcc00..f286244a9f 100644 --- a/Core/Code/DataManagement/mitkOldTypeConversions.h +++ b/Core/Code/DataManagement/mitkOldTypeConversions.h @@ -1,242 +1,249 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef MITKOLDTYPECONVERSIONS_H_ #define MITKOLDTYPECONVERSIONS_H_ #include #include "mitkTypeBasics.h" #include "mitkTypedefs.h" #include "mitkVector.h" + + + +#include "mitkVector.h" + + template class VectorTraits { public: typedef T ValueType; }; template <> class VectorTraits { public: typedef mitk::ScalarType ValueType; }; template<> class VectorTraits { public: typedef float ValueType; }; template<> class VectorTraits< itk::Index<5> > { public: typedef itk::Index<5>::IndexValueType ValueType; }; template<> class VectorTraits< itk::Index<3> > { public: typedef itk::Index<3>::IndexValueType ValueType; }; template<> class VectorTraits< long int [3]> { public: typedef long int ValueType; }; template<> class VectorTraits< float [3]> { public: typedef float ValueType; }; template<> class VectorTraits< double [3]> { public: typedef double ValueType; }; template<> class VectorTraits< vnl_vector_fixed > { public: typedef mitk::ScalarType ValueType; }; template<> class VectorTraits< long unsigned int[3]> { public: typedef long unsigned int ValueType; }; template<> class VectorTraits< unsigned int *> { public: typedef unsigned int ValueType; }; template<> class VectorTraits< double[4] > { public: typedef double ValueType; }; template<> class VectorTraits< itk::Vector > { public: typedef float ValueType; }; template<> class VectorTraits< itk::Vector > { public: typedef double ValueType; }; template<> class VectorTraits< itk::Vector > { public: typedef int ValueType; }; template<> class VectorTraits< mitk::Vector > { public: typedef double ValueType; }; template<> class VectorTraits< mitk::Point > { public: typedef float ValueType; }; template<> class VectorTraits< mitk::Point > { public: typedef float ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef float ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef float ValueType; }; template<> class VectorTraits< mitk::Point > { public: typedef double ValueType; }; template<> class VectorTraits< mitk::Point > { public: typedef double ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef double ValueType; }; template<> class VectorTraits< itk::Point > { public: typedef double ValueType; }; template<> class VectorTraits< mitk::Point > { public: typedef int ValueType; }; namespace mitk { + template inline void FillVector3D(Tout& out, mitk::ScalarType x, mitk::ScalarType y, mitk::ScalarType z) { out[0] = (typename VectorTraits::ValueType)x; out[1] = (typename VectorTraits::ValueType)y; out[2] = (typename VectorTraits::ValueType)z; } template inline void FillVector4D(Tout& out, mitk::ScalarType x, mitk::ScalarType y, mitk::ScalarType z, mitk::ScalarType t) { out[0] = (typename VectorTraits::ValueType)x; out[1] = (typename VectorTraits::ValueType)y; out[2] = (typename VectorTraits::ValueType)z; out[3] = (typename VectorTraits::ValueType)t; } template inline void itk2vtk(const Tin& in, Tout& out) { out[0]=(typename VectorTraits::ValueType)(in[0]); out[1]=(typename VectorTraits::ValueType)(in[1]); out[2]=(typename VectorTraits::ValueType)(in[2]); } template inline void vtk2itk(const Tin& in, Tout& out) { out[0]=(typename VectorTraits::ValueType)(in[0]); out[1]=(typename VectorTraits::ValueType)(in[1]); out[2]=(typename VectorTraits::ValueType)(in[2]); } template inline void vnl2vtk(const vnl_vector& in, Tout *out) { unsigned int i; for(i=0; i inline void vtk2vnl(const Tin *in, vnl_vector& out) { unsigned int i; for(i=0; i inline void vtk2vnlref(const Tin *in, vnl_vector_ref& out) { unsigned int i; for(i=0; i inline void vnl2vtk(const vnl_vector_fixed& in, Tout *out) { unsigned int i; for(i=0; i inline void vtk2vnl(const Tin *in, vnl_vector_fixed& out) { unsigned int i; for(i=0; i inline void TransferMatrix(const itk::Matrix& in, itk::Matrix& out) { for (unsigned int i = 0; i < in.RowDimensions; ++i) for (unsigned int j = 0; j < in.ColumnDimensions; ++j) out[i][j] = in[i][j]; } } // namespace mitk #endif /* MITKOLDTYPECONVERSIONS_H_ */ diff --git a/Core/Code/DataManagement/mitkTypeConversions.h b/Core/Code/DataManagement/mitkTypeConversions.h new file mode 100644 index 0000000000..3724f0bde9 --- /dev/null +++ b/Core/Code/DataManagement/mitkTypeConversions.h @@ -0,0 +1,74 @@ +/* + * mitkTypeConversions.h + * + * Created on: Nov 11, 2013 + * Author: wirkert + */ + +#ifndef MITKTYPECONVERSIONS_H_ +#define MITKTYPECONVERSIONS_H_ + + +#include "mitkTypeBasics.h" +#include "mitkTypedefs.h" + +namespace mitk { + + + /** + * Now methods to copy from and into ArrayTypes. + * ArrayTypes here are all types who implement operator[]. + * The two templated methods were made free floating so you may specialize them + * for your concrete type. + */ + + + template + void FromArray(itk::FixedArray& toArray, const ArrayType& array) + { + itk::FixedArray vectorOrPoint; + + for (unsigned short int var = 0; var < NVectorDimension; ++var) + { + toArray[var] = array[var]; + } + } + + /** + * @brief Copies elements of an array to this Vector + * @param[in] array the array whose values will be copied into the Vector. Must be of a type which overrides the [] operator + * @param return the FixedArrray (e.g., mitk::Vector or mitk::Point) which should hold the elements of array. + * @attention array must be of dimension NVectorDimension! + * @attention this method implicitly converts between data types. + */ + template + itk::FixedArray FromArray(const ArrayType& array) + { + itk::FixedArray vectorOrPoint; + + mitk::FromArray(vectorOrPoint, array); + + return vectorOrPoint; + } + + /** + * @brief Copies the elements of this into an array + * @param[in] vectorOrPoint the itk::FixedArray which shall be copied into the array. Can e.g. be of type mitk::Vector or mitk::Point + * @param[out] array the array which will hold the elements. Must be of a type which overrides the [] operator. + * @attention array must be of dimension NVectorDimension! + * @attention this method implicitly converts between data types. + */ + template + void ToArray(ArrayType& array, const itk::FixedArray& vectorOrPoint) + { + for (unsigned short int var = 0; var < NVectorDimension; ++var) + { + array[var] = vectorOrPoint[var]; + } + } + + +} + + +#endif /* MITKTYPECONVERSIONS_H_ */ diff --git a/Core/Code/DataManagement/mitkVector.h b/Core/Code/DataManagement/mitkVector.h index d2f908ce9a..925ba58ff2 100644 --- a/Core/Code/DataManagement/mitkVector.h +++ b/Core/Code/DataManagement/mitkVector.h @@ -1,155 +1,125 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef MITKVECTOR_H_ #define MITKVECTOR_H_ #include #include #include #include "mitkTypeBasics.h" +#include "mitkTypeConversions.h" #include "mitkExceptionMacro.h" namespace mitk { template class Vector : public itk::Vector { public: /** * @brief Default constructor has nothing to do. */ Vector() : itk::Vector() {} /** * @brief Copy constructor. */ - Vector(const Vector& r) + Vector(const mitk::Vector& r) : itk::Vector(r) {} /** * @brief Constructor to convert from itk::Vector to mitk::Vector. */ Vector(const itk::Vector& r) : itk::Vector(r) {} /** * @brief Constructor to convert an array to mitk::Vector * @param r the array. * @attention must have NVectorDimension valid arguments! */ Vector(const TCoordRep r[NVectorDimension]) : itk::Vector(r) {} /** * Constructor to initialize entire vector to one value. */ Vector(const TCoordRep & v) : itk::Vector(v) {} /** * @brief Constructor for vnl_vectors. * @throws mitk::Exception if vnl_vector.size() != NVectorDimension. */ Vector(const vnl_vector& vnlVector) : itk::Vector() { if (vnlVector.size() != NVectorDimension) mitkThrow() << "when constructing mitk::Vector from vnl_vector: sizes didn't match: mitk::Vector " << NVectorDimension << "; vnl_vector " << vnlVector.size(); for (int var = 0; (var < NVectorDimension) && (var < vnlVector.size()); ++var) { this->SetElement(var, vnlVector.get(var)); } } /** * @brief Constructor for vnl_vector_fixed. */ - Vector(const vnl_vector_fixed vnlVectorFixed) + Vector(const vnl_vector_fixed& vnlVectorFixed) : itk::Vector() { - for (int var = 0; var < 3; ++var) { + for (int var = 0; var < NVectorDimension; ++var) { this->SetElement(var, vnlVectorFixed[var]); } }; + template + void FromArray(const ArrayType& array) + { + itk::FixedArray* thisP = dynamic_cast* >(this); + mitk::FromArray(*thisP, array); + } + /** * @brief User defined conversion of mitk::Vector to vnl_vector. * Note: the conversion to mitk::Vector to vnl_vector_fixed has not been implemented since this * would collide with the conversion vnl_vector to vnl_vector_fixed provided by vnl. */ operator vnl_vector () const { - vnl_vector vnlVector(this->GetVnlVector()); - return vnlVector; + return this->GetVnlVector(); } }; // end mitk::Vector // convenience typedefs for often used mitk::Vector representations. typedef Vector Vector2D; typedef Vector Vector3D; typedef Vector Vector4D; - /** - * Now methods to copy from and into ArrayTypes. - * ArrayTypes here are all types who implement operator[]. - * The two methods were made free floating so you may template specifications for you concrete type. - */ - - /** - * @brief Copies elements of an array to this Vector - * @param[in] array the array whose values will be copied into the Vector. Must be of a type which overrides the [] operator - * @param[out] vectorOrPoint the FixedArrray (e.g., mitk::Vector or mitk::Point) which should hold the elements of array. - * @attention array must be of dimension NVectorDimension! - * @attention this method implicitly converts between data types. - */ - template - void FromArray(itk::FixedArray& vectorOrPoint, const ArrayType& array) - { - for (unsigned short int var = 0; var < NVectorDimension; ++var) - { - vectorOrPoint[var] = array[var]; - } - } - - - /** - * @brief Copies the elements of this into an array - * @param[in] vectorOrPoint the itk::FixedArray which shall be copied into the array. Can e.g. be of type mitk::Vector or mitk::Point - * @param[out] array the array which will hold the elements. Must be of a type which overrides the [] operator. - * @attention array must be of dimension NVectorDimension! - * @attention this method implicitly converts between data types. - */ - template - void ToArray(ArrayType& array, const itk::FixedArray& vectorOrPoint) - { - for (unsigned short int var = 0; var < NVectorDimension; ++var) - { - array[var] = vectorOrPoint[var]; - } - } + } // end namespace mitk #endif /* MITKVECTOR_H_ */ diff --git a/Core/Code/Testing/mitkTypeVectorConversionTest.cpp b/Core/Code/Testing/mitkTypeVectorConversionTest.cpp index 5619702e0f..499788f986 100644 --- a/Core/Code/Testing/mitkTypeVectorConversionTest.cpp +++ b/Core/Code/Testing/mitkTypeVectorConversionTest.cpp @@ -1,272 +1,272 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include #include "itkVector.h" #include #include #include "vnl/vnl_math.h" #include "mitkTestingMacros.h" #include "mitkTypeBasics.h" #include "mitkVector.h" #include "mitkTypes.h" // for Equals // TODO SW: here we will need a guard in case opencv is not activated in a build. #include using namespace mitk; /** * these static variables are used in the test functions * * The variable which should be copied into is set to its original value. * The value which should be copied is set to valuesToCopy. * * Then the copying takes place. The test is successful, if the variable which * should be copied into holds the valuesToCopy afterwards and is equal to the * vector which should be copied. */ static const ScalarType originalValues[] = {1.123456789987, 2.789456321456, 3.123654789987456}; static const ScalarType valuesToCopy[] = {4.654789123321, 5.987456789321, 6.321654987789546}; /** * @brief Convenience method to test if one vector has been assigned successfully to the other. * * More specifically, tests if v1 = v2 was performed correctly. The method therefore assures that * 1. v1 equals v2 and * 2. both hold the values of v2. * * @param v1 The vector v1 of the assignment v1 = v2 * @param v2 The vector v2 of the assignment v1 = v2 * @param v1Name The type name of v1 (e.g.: mitk::Vector3D). Necessary for the correct test output. * @param v2Name The type name of v2 (e.g.: mitk::Vector3D). Necessary for the correct test output. * @param eps defines the allowed tolerance when testing for equality. */ template static void TestForEquality(T1 v1, T2 v2, std::string v1Name, std::string v2Name, ScalarType eps = mitk::eps) { MITK_TEST_CONDITION( EqualArray(v1, v2, 3, eps), "\nAssigning " << v2Name << " to " << v1Name << ":\n1. both are equal") MITK_TEST_CONDITION( EqualArray(v1, v2, 3, eps), "2. both hold values of " << v2Name) } const float epsDouble2Float = vnl_math::float_eps * 10.0; static void Test_pod2mitk(void) { mitk::Vector3D vector3D = valuesToCopy; TestForEquality(vector3D, valuesToCopy, "mitk::Vector3D", "double POD"); } static void Test_mitk2pod(void) { ScalarType podArray[3]; mitk::Vector3D vector3D = valuesToCopy; ToArray(podArray, vector3D); TestForEquality(podArray, vector3D, "double POD", "mitk::Vector3D"); } static void Test_oneElement2mitk(void) { double twos[] = {2.0, 2.0, 2.0}; mitk::Vector vector3D(2.0); MITK_TEST_CONDITION(EqualArray(vector3D, twos, 3), "\none values initializes all elements to this value") } static void Test_itk2mitk(void) { Vector3D vector3D = originalValues; itk::Vector itkVector = valuesToCopy; vector3D = itkVector; TestForEquality(vector3D, itkVector, "mitk::Vector3D", "itk::Vector"); } static void Test_mitk2itk(void) { Vector3D vector3D = valuesToCopy; itk::Vector itkVector = originalValues; itkVector = vector3D; TestForEquality(itkVector, vector3D, "itk::Vector", "mitk::Vector3D"); } static void Test_vnlfixed2mitk(void) { mitk::Vector3D vector3D = originalValues; vnl_vector_fixed vnlVectorFixed(valuesToCopy); vector3D = vnlVectorFixed; TestForEquality(vector3D, vnlVectorFixed, "mitk::Vector3D", "vnl_vector_fixed"); } static void Test_mitk2vnlfixed(void) { vnl_vector_fixed vnlVectorFixed(originalValues); mitk::Vector3D vector3D = valuesToCopy; vnlVectorFixed = vector3D; TestForEquality(vnlVectorFixed, vector3D, "vnl_vector_fixed", "mitk::Vector3D"); } static void Test_vnl2mitk(void) { mitk::Vector3D vector3D = originalValues; vnl_vector vnlVector(3); vnlVector.set(valuesToCopy); vector3D = vnlVector; TestForEquality(vector3D, vnlVector, "mitk::Vector3D", "vnl_vector"); } static void Test_mitk2vnl(void) { vnl_vector vnlVector(3); vnlVector.set(originalValues); mitk::Vector3D vector3D = valuesToCopy; vnlVector = vector3D; TestForEquality(vnlVector, vector3D, "vnl_vector", "mitk::Vector3D"); } /** * @brief Tests if an exception is thrown when constructing an mitk::Vector form a vnl_vector of not suited size. */ static void Test_vnl2mitk_WrongVnlVectorSize() { ScalarType largerValuesToCopy[] = {4.12345678910, 5.10987654321, 6.123456789132456, 7.123456987789456}; mitk::Vector3D vector3D = originalValues; vnl_vector vnlVector(4); vnlVector.set(largerValuesToCopy); MITK_TEST_FOR_EXCEPTION(mitk::Exception&, vector3D = vnlVector;) } static void Test_mitk2opencv() { cv::Vec3d opencvVector(originalValues[0], originalValues[1], originalValues[2]); mitk::Vector3D vector3D = valuesToCopy; ToArray(opencvVector, vector3D); TestForEquality(opencvVector, vector3D, "cv::Vec3d", "mitk::Vector3D"); } static void Test_opencv2mitk() { mitk::Vector3D vector3D = originalValues; cv::Vec3d opencvVector(valuesToCopy[0], valuesToCopy[1], valuesToCopy[2]); - FromArray(vector3D, opencvVector); + vector3D.FromArray(opencvVector); TestForEquality(vector3D, opencvVector, "mitk::Vector3D", "cv::Vec3d"); } static void Test_ToArray_DifferentType(void) { float podArray[3]; for (int var = 0; var < 3; ++var) { podArray[var] = originalValues[var]; } mitk::Vector3D vector3D = valuesToCopy; ToArray(podArray, vector3D); TestForEquality(podArray, vector3D, "float POD", "mitk::Vector3D", epsDouble2Float); } static void Test_FromArray_DifferentType(void) { mitk::Vector3D vector3D = originalValues; float podArray[3]; for (int var = 0; var < 3; ++var) { podArray[var] = valuesToCopy[var]; } - FromArray(vector3D, podArray); + vector3D.FromArray(podArray); TestForEquality(vector3D, podArray, "mitk::Vector3D", "float POD", epsDouble2Float); } /** * @brief Test the conversions from and to the mitk::Vector type. * * Tests for every conversion, if it can be done and in a second test, if the assignment of a * different type succeeds. E.g., assign a double vnl_vector to a float mitk::Vector * In cases where the size can not be determined during compile time it is checked if the assignment of * a differently sized vector yields an error. */ int mitkTypeVectorConversionTest(int /*argc*/ , char* /*argv*/[]) { // always start with this! MITK_TEST_BEGIN("VectorConversionTest") Test_pod2mitk(); Test_mitk2pod(); Test_oneElement2mitk(); Test_itk2mitk(); Test_mitk2itk(); Test_vnlfixed2mitk(); Test_mitk2vnlfixed(); Test_vnl2mitk(); Test_mitk2vnl(); Test_vnl2mitk_WrongVnlVectorSize(); Test_mitk2opencv(); Test_opencv2mitk(); /** * The ToArray and FromArray can assign non equal types by implicit primitive type conversion. * The next two tests show this behavior */ Test_ToArray_DifferentType(); Test_FromArray_DifferentType(); MITK_TEST_END() } diff --git a/Core/Code/files.cmake b/Core/Code/files.cmake index 39ee2a1b75..4924625a1c 100644 --- a/Core/Code/files.cmake +++ b/Core/Code/files.cmake @@ -1,415 +1,416 @@ set(H_FILES Algorithms/itkImportMitkImageContainer.h Algorithms/itkImportMitkImageContainer.txx Algorithms/itkLocalVariationImageFilter.h Algorithms/itkLocalVariationImageFilter.txx Algorithms/itkMITKScalarImageToHistogramGenerator.h Algorithms/itkMITKScalarImageToHistogramGenerator.txx Algorithms/itkTotalVariationDenoisingImageFilter.h Algorithms/itkTotalVariationDenoisingImageFilter.txx Algorithms/itkTotalVariationSingleIterationImageFilter.h Algorithms/itkTotalVariationSingleIterationImageFilter.txx Algorithms/mitkBilateralFilter.h Algorithms/mitkBilateralFilter.cpp Algorithms/mitkInstantiateAccessFunctions.h Algorithms/mitkPixelTypeList.h Algorithms/mitkPPArithmeticDec.h Algorithms/mitkPPArgCount.h Algorithms/mitkPPCat.h Algorithms/mitkPPConfig.h Algorithms/mitkPPControlExprIIf.h Algorithms/mitkPPControlIf.h Algorithms/mitkPPControlIIf.h Algorithms/mitkPPDebugError.h Algorithms/mitkPPDetailAutoRec.h Algorithms/mitkPPDetailDMCAutoRec.h Algorithms/mitkPPExpand.h Algorithms/mitkPPFacilitiesEmpty.h Algorithms/mitkPPFacilitiesExpand.h Algorithms/mitkPPLogicalBool.h Algorithms/mitkPPRepetitionDetailDMCFor.h Algorithms/mitkPPRepetitionDetailEDGFor.h Algorithms/mitkPPRepetitionDetailFor.h Algorithms/mitkPPRepetitionDetailMSVCFor.h Algorithms/mitkPPRepetitionFor.h Algorithms/mitkPPSeqElem.h Algorithms/mitkPPSeqForEach.h Algorithms/mitkPPSeqForEachProduct.h Algorithms/mitkPPSeq.h Algorithms/mitkPPSeqEnum.h Algorithms/mitkPPSeqSize.h Algorithms/mitkPPSeqToTuple.h Algorithms/mitkPPStringize.h Algorithms/mitkPPTupleEat.h Algorithms/mitkPPTupleElem.h Algorithms/mitkPPTupleRem.h Algorithms/mitkClippedSurfaceBoundsCalculator.h Algorithms/mitkExtractSliceFilter.h Algorithms/mitkConvert2Dto3DImageFilter.h Algorithms/mitkPlaneClipping.h Common/mitkExceptionMacro.h Common/mitkServiceBaseObject.h Common/mitkTestingMacros.h Common/mitkTesting.h DataManagement/mitkProportionalTimeGeometry.h DataManagement/mitkTimeGeometry.h DataManagement/mitkImageAccessByItk.h DataManagement/mitkImageCast.h DataManagement/mitkImagePixelAccessor.h DataManagement/mitkImagePixelReadAccessor.h DataManagement/mitkImagePixelWriteAccessor.h DataManagement/mitkImageReadAccessor.h DataManagement/mitkImageWriteAccessor.h DataManagement/mitkITKImageImport.h DataManagement/mitkITKImageImport.txx DataManagement/mitkImageToItk.h DataManagement/mitkImageToItk.txx DataManagement/mitkTimeSlicedGeometry.h # Deprecated, empty for compatibilty reasons. DataManagement/mitkOldTypeConversions.h + DataManagement/mitkTypeConversions.h DataManagement/mitkTypedefs.h DataManagement/mitkTypes.h DataManagement/mitkVector.h DataManagement/mitkPoint.h DataManagement/mitkMatrix.h DataManagement/mitkTypeOperations.h Interactions/mitkEventMapperAddOn.h Interfaces/mitkIDataNodeReader.h Rendering/mitkLocalStorageHandler.h IO/mitkPixelTypeTraits.h ) set(CPP_FILES Algorithms/mitkBaseDataSource.cpp Algorithms/mitkCompareImageFilter.cpp Algorithms/mitkDataNodeSource.cpp Algorithms/mitkGeometry2DDataToSurfaceFilter.cpp Algorithms/mitkHistogramGenerator.cpp Algorithms/mitkImageChannelSelector.cpp Algorithms/mitkImageSliceSelector.cpp Algorithms/mitkImageSource.cpp Algorithms/mitkImageTimeSelector.cpp Algorithms/mitkImageToImageFilter.cpp Algorithms/mitkImageToSurfaceFilter.cpp Algorithms/mitkPointSetSource.cpp Algorithms/mitkPointSetToPointSetFilter.cpp Algorithms/mitkRGBToRGBACastImageFilter.cpp Algorithms/mitkSubImageSelector.cpp Algorithms/mitkSurfaceSource.cpp Algorithms/mitkSurfaceToImageFilter.cpp Algorithms/mitkSurfaceToSurfaceFilter.cpp Algorithms/mitkUIDGenerator.cpp Algorithms/mitkVolumeCalculator.cpp Algorithms/mitkClippedSurfaceBoundsCalculator.cpp Algorithms/mitkExtractSliceFilter.cpp Algorithms/mitkConvert2Dto3DImageFilter.cpp Controllers/mitkBaseController.cpp Controllers/mitkCallbackFromGUIThread.cpp Controllers/mitkCameraController.cpp Controllers/mitkCameraRotationController.cpp Controllers/mitkCoreActivator.cpp Controllers/mitkFocusManager.cpp Controllers/mitkLimitedLinearUndo.cpp Controllers/mitkOperationEvent.cpp Controllers/mitkPlanePositionManager.cpp Controllers/mitkProgressBar.cpp Controllers/mitkRenderingManager.cpp Controllers/mitkSliceNavigationController.cpp Controllers/mitkSlicesCoordinator.cpp Controllers/mitkSlicesRotator.cpp Controllers/mitkSlicesSwiveller.cpp Controllers/mitkStatusBar.cpp Controllers/mitkStepper.cpp Controllers/mitkTestManager.cpp Controllers/mitkUndoController.cpp Controllers/mitkVerboseLimitedLinearUndo.cpp Controllers/mitkVtkInteractorCameraController.cpp Controllers/mitkVtkLayerController.cpp DataManagement/mitkProportionalTimeGeometry.cpp DataManagement/mitkTimeGeometry.cpp DataManagement/mitkAbstractTransformGeometry.cpp DataManagement/mitkAnnotationProperty.cpp DataManagement/mitkApplicationCursor.cpp DataManagement/mitkBaseData.cpp DataManagement/mitkBaseProperty.cpp DataManagement/mitkClippingProperty.cpp DataManagement/mitkChannelDescriptor.cpp DataManagement/mitkColorProperty.cpp DataManagement/mitkDataStorage.cpp # DataManagement/mitkDataTree.cpp DataManagement/mitkDataNode.cpp DataManagement/mitkDataNodeFactory.cpp # DataManagement/mitkDataTreeStorage.cpp DataManagement/mitkDisplayGeometry.cpp DataManagement/mitkEnumerationProperty.cpp DataManagement/mitkGeometry2D.cpp DataManagement/mitkGeometry2DData.cpp DataManagement/mitkGeometry3D.cpp DataManagement/mitkGeometryData.cpp DataManagement/mitkGroupTagProperty.cpp DataManagement/mitkImage.cpp DataManagement/mitkImageAccessorBase.cpp DataManagement/mitkImageCaster.cpp DataManagement/mitkImageCastPart1.cpp DataManagement/mitkImageCastPart2.cpp DataManagement/mitkImageCastPart3.cpp DataManagement/mitkImageCastPart4.cpp DataManagement/mitkImageDataItem.cpp DataManagement/mitkImageDescriptor.cpp DataManagement/mitkImageVtkAccessor.cpp DataManagement/mitkImageStatisticsHolder.cpp DataManagement/mitkLandmarkBasedCurvedGeometry.cpp DataManagement/mitkLandmarkProjectorBasedCurvedGeometry.cpp DataManagement/mitkLandmarkProjector.cpp DataManagement/mitkLevelWindow.cpp DataManagement/mitkLevelWindowManager.cpp DataManagement/mitkLevelWindowPreset.cpp DataManagement/mitkLevelWindowProperty.cpp DataManagement/mitkLookupTable.cpp DataManagement/mitkLookupTables.cpp # specializations of GenericLookupTable DataManagement/mitkMemoryUtilities.cpp DataManagement/mitkModalityProperty.cpp DataManagement/mitkModeOperation.cpp DataManagement/mitkNodePredicateAnd.cpp DataManagement/mitkNodePredicateBase.cpp DataManagement/mitkNodePredicateCompositeBase.cpp DataManagement/mitkNodePredicateData.cpp DataManagement/mitkNodePredicateDataType.cpp DataManagement/mitkNodePredicateDimension.cpp DataManagement/mitkNodePredicateFirstLevel.cpp DataManagement/mitkNodePredicateNot.cpp DataManagement/mitkNodePredicateOr.cpp DataManagement/mitkNodePredicateProperty.cpp DataManagement/mitkNodePredicateSource.cpp DataManagement/mitkPlaneOrientationProperty.cpp DataManagement/mitkPlaneGeometry.cpp DataManagement/mitkPlaneOperation.cpp DataManagement/mitkPointOperation.cpp DataManagement/mitkPointSet.cpp DataManagement/mitkProperties.cpp DataManagement/mitkPropertyList.cpp DataManagement/mitkRestorePlanePositionOperation.cpp DataManagement/mitkRotationOperation.cpp DataManagement/mitkSlicedData.cpp DataManagement/mitkSlicedGeometry3D.cpp DataManagement/mitkSmartPointerProperty.cpp DataManagement/mitkStandaloneDataStorage.cpp DataManagement/mitkStateTransitionOperation.cpp DataManagement/mitkStringProperty.cpp DataManagement/mitkSurface.cpp DataManagement/mitkSurfaceOperation.cpp DataManagement/mitkThinPlateSplineCurvedGeometry.cpp DataManagement/mitkTransferFunction.cpp DataManagement/mitkTransferFunctionProperty.cpp DataManagement/mitkTransferFunctionInitializer.cpp DataManagement/mitkVector.cpp DataManagement/mitkTypeBasics.cpp DataManagement/mitkVtkInterpolationProperty.cpp DataManagement/mitkVtkRepresentationProperty.cpp DataManagement/mitkVtkResliceInterpolationProperty.cpp DataManagement/mitkVtkScalarModeProperty.cpp DataManagement/mitkVtkVolumeRenderingProperty.cpp DataManagement/mitkWeakPointerProperty.cpp DataManagement/mitkRenderingModeProperty.cpp DataManagement/mitkShaderProperty.cpp DataManagement/mitkResliceMethodProperty.cpp DataManagement/mitkMaterial.cpp DataManagement/mitkPointSetShapeProperty.cpp DataManagement/mitkFloatPropertyExtension.cpp DataManagement/mitkIntPropertyExtension.cpp DataManagement/mitkPropertyExtension.cpp DataManagement/mitkPropertyFilter.cpp DataManagement/mitkPropertyAliases.cpp DataManagement/mitkPropertyDescriptions.cpp DataManagement/mitkPropertyExtensions.cpp DataManagement/mitkPropertyFilters.cpp Interactions/mitkAction.cpp Interactions/mitkAffineInteractor.cpp Interactions/mitkBindDispatcherInteractor.cpp Interactions/mitkCoordinateSupplier.cpp Interactions/mitkDataInteractor.cpp Interactions/mitkDispatcher.cpp Interactions/mitkDisplayCoordinateOperation.cpp Interactions/mitkDisplayInteractor.cpp Interactions/mitkDisplayPositionEvent.cpp # Interactions/mitkDisplayVectorInteractorLevelWindow.cpp # legacy, prob even now unneeded # Interactions/mitkDisplayVectorInteractorScroll.cpp Interactions/mitkEvent.cpp Interactions/mitkEventConfig.cpp Interactions/mitkEventDescription.cpp Interactions/mitkEventFactory.cpp Interactions/mitkInteractionEventHandler.cpp Interactions/mitkEventMapper.cpp Interactions/mitkEventStateMachine.cpp Interactions/mitkGlobalInteraction.cpp Interactions/mitkInteractor.cpp Interactions/mitkInternalEvent.cpp Interactions/mitkInteractionEvent.cpp Interactions/mitkInteractionEventConst.cpp Interactions/mitkInteractionPositionEvent.cpp Interactions/mitkInteractionKeyEvent.cpp Interactions/mitkMousePressEvent.cpp Interactions/mitkMouseMoveEvent.cpp Interactions/mitkMouseReleaseEvent.cpp Interactions/mitkMouseWheelEvent.cpp Interactions/mitkMouseDoubleClickEvent.cpp Interactions/mitkMouseModeSwitcher.cpp Interactions/mitkMouseMovePointSetInteractor.cpp Interactions/mitkMoveBaseDataInteractor.cpp Interactions/mitkNodeDepententPointSetInteractor.cpp Interactions/mitkPointSetDataInteractor.cpp Interactions/mitkPointSetInteractor.cpp Interactions/mitkPositionEvent.cpp Interactions/mitkPositionTracker.cpp Interactions/mitkStateMachineAction.cpp Interactions/mitkStateMachineCondition.cpp Interactions/mitkStateMachineState.cpp Interactions/mitkStateMachineTransition.cpp Interactions/mitkState.cpp Interactions/mitkStateMachineContainer.cpp Interactions/mitkStateEvent.cpp Interactions/mitkStateMachine.cpp Interactions/mitkStateMachineFactory.cpp Interactions/mitkTransition.cpp Interactions/mitkWheelEvent.cpp Interactions/mitkKeyEvent.cpp Interactions/mitkVtkEventAdapter.cpp Interactions/mitkVtkInteractorStyle.cxx Interactions/mitkCrosshairPositionEvent.cpp Interfaces/mitkInteractionEventObserver.cpp Interfaces/mitkIShaderRepository.cpp Interfaces/mitkIPropertyAliases.cpp Interfaces/mitkIPropertyDescriptions.cpp Interfaces/mitkIPropertyExtensions.cpp Interfaces/mitkIPropertyFilters.cpp IO/mitkBaseDataIOFactory.cpp IO/mitkCoreDataNodeReader.cpp IO/mitkDicomSeriesReader.cpp IO/mitkDicomSR_LoadDICOMScalar.cpp IO/mitkDicomSR_LoadDICOMScalar4D.cpp IO/mitkDicomSR_LoadDICOMRGBPixel.cpp IO/mitkDicomSR_LoadDICOMRGBPixel4D.cpp IO/mitkDicomSR_ImageBlockDescriptor.cpp IO/mitkDicomSR_GantryTiltInformation.cpp IO/mitkDicomSR_SliceGroupingResult.cpp IO/mitkFileReader.cpp IO/mitkFileSeriesReader.cpp IO/mitkFileWriter.cpp # IO/mitkIpPicGet.c IO/mitkImageGenerator.cpp IO/mitkImageWriter.cpp IO/mitkImageWriterFactory.cpp IO/mitkItkImageFileIOFactory.cpp IO/mitkItkImageFileReader.cpp IO/mitkItkLoggingAdapter.cpp IO/mitkItkPictureWrite.cpp IO/mitkIOUtil.cpp IO/mitkLookupTableProperty.cpp IO/mitkOperation.cpp # IO/mitkPicFileIOFactory.cpp # IO/mitkPicFileReader.cpp # IO/mitkPicFileWriter.cpp # IO/mitkPicHelper.cpp # IO/mitkPicVolumeTimeSeriesIOFactory.cpp # IO/mitkPicVolumeTimeSeriesReader.cpp IO/mitkPixelType.cpp IO/mitkPointSetIOFactory.cpp IO/mitkPointSetReader.cpp IO/mitkPointSetWriter.cpp IO/mitkPointSetWriterFactory.cpp IO/mitkRawImageFileReader.cpp IO/mitkStandardFileLocations.cpp IO/mitkSTLFileIOFactory.cpp IO/mitkSTLFileReader.cpp IO/mitkSurfaceVtkWriter.cpp IO/mitkSurfaceVtkWriterFactory.cpp IO/mitkVtkLoggingAdapter.cpp IO/mitkVtiFileIOFactory.cpp IO/mitkVtiFileReader.cpp IO/mitkVtkImageIOFactory.cpp IO/mitkVtkImageReader.cpp IO/mitkVtkSurfaceIOFactory.cpp IO/mitkVtkSurfaceReader.cpp IO/vtkPointSetXMLParser.cpp IO/mitkLog.cpp Rendering/mitkBaseRenderer.cpp Rendering/mitkVtkMapper.cpp Rendering/mitkRenderWindowFrame.cpp Rendering/mitkGeometry2DDataMapper2D.cpp Rendering/mitkGeometry2DDataVtkMapper3D.cpp Rendering/mitkGLMapper.cpp Rendering/mitkGradientBackground.cpp Rendering/mitkManufacturerLogo.cpp Rendering/mitkMapper.cpp Rendering/mitkPointSetGLMapper2D.cpp Rendering/mitkPointSetVtkMapper2D.cpp Rendering/mitkPointSetVtkMapper3D.cpp Rendering/mitkPolyDataGLMapper2D.cpp Rendering/mitkSurfaceGLMapper2D.cpp Rendering/mitkSurfaceVtkMapper3D.cpp Rendering/mitkVolumeDataVtkMapper3D.cpp Rendering/mitkVtkPropRenderer.cpp Rendering/mitkVtkWidgetRendering.cpp Rendering/vtkMitkRectangleProp.cpp Rendering/vtkMitkRenderProp.cpp Rendering/mitkVtkEventProvider.cpp Rendering/mitkRenderWindow.cpp Rendering/mitkRenderWindowBase.cpp Rendering/mitkShaderRepository.cpp Rendering/mitkImageVtkMapper2D.cpp Rendering/vtkMitkThickSlicesFilter.cpp Rendering/vtkMitkLevelWindowFilter.cpp Rendering/vtkNeverTranslucentTexture.cpp Rendering/mitkRenderingTestHelper.cpp Rendering/mitkOverlay.cpp Rendering/mitkVtkOverlay.cpp Rendering/mitkVtkOverlay2D.cpp Rendering/mitkVtkOverlay3D.cpp Rendering/mitkOverlayManager.cpp Rendering/mitkAbstractOverlayLayouter.cpp Rendering/mitkTextOverlay2D.cpp Rendering/mitkTextOverlay3D.cpp Rendering/mitkLabelOverlay3D.cpp Rendering/mitkOverlay2DLayouter.cpp Common/mitkException.cpp Common/mitkCommon.h Common/mitkCoreObjectFactoryBase.cpp Common/mitkCoreObjectFactory.cpp Common/mitkCoreServices.cpp ) list(APPEND CPP_FILES ${CppMicroServices_SOURCES}) set(RESOURCE_FILES Interactions/globalConfig.xml Interactions/DisplayInteraction.xml Interactions/DisplayConfig.xml Interactions/DisplayConfigPACS.xml Interactions/DisplayConfigPACSPan.xml Interactions/DisplayConfigPACSScroll.xml Interactions/DisplayConfigPACSZoom.xml Interactions/DisplayConfigPACSLevelWindow.xml Interactions/DisplayConfigMITK.xml Interactions/PointSet.xml Interactions/Legacy/StateMachine.xml Interactions/Legacy/DisplayConfigMITKTools.xml Interactions/PointSetConfig.xml Shaders/mitkShaderLighting.xml mitkLevelWindowPresets.xml )