diff --git a/Core/Code/DataManagement/mitkProportionalTimeGeometry.cpp b/Core/Code/DataManagement/mitkProportionalTimeGeometry.cpp index 82d6206c0c..cbce4c9e97 100644 --- a/Core/Code/DataManagement/mitkProportionalTimeGeometry.cpp +++ b/Core/Code/DataManagement/mitkProportionalTimeGeometry.cpp @@ -1,213 +1,221 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include #include mitk::ProportionalTimeGeometry::ProportionalTimeGeometry() : m_FirstTimePoint(0.0), m_StepDuration(1.0) { } mitk::ProportionalTimeGeometry::~ProportionalTimeGeometry() { } void mitk::ProportionalTimeGeometry::Initialize() { m_FirstTimePoint = 0.0; m_StepDuration = 1.0; } mitk::TimeStepType mitk::ProportionalTimeGeometry::GetNumberOfTimeSteps () const { return static_cast(m_GeometryVector.size() ); } mitk::TimePointType mitk::ProportionalTimeGeometry::GetMinimumTimePoint () const { return m_FirstTimePoint; } mitk::TimePointType mitk::ProportionalTimeGeometry::GetMaximumTimePoint () const { - return m_FirstTimePoint + m_StepDuration * GetNumberOfTimeSteps(); + TimePointType timePoint = m_FirstTimePoint + m_StepDuration * GetNumberOfTimeSteps(); + if (timePoint >std::numeric_limits().max()) + timePoint = std::numeric_limits().max(); + return timePoint; } mitk::TimeBounds mitk::ProportionalTimeGeometry::GetTimeBounds () const { TimeBounds bounds; bounds[0] = this->GetMinimumTimePoint(); bounds[1] = this->GetMaximumTimePoint(); return bounds; } bool mitk::ProportionalTimeGeometry::IsValidTimePoint (TimePointType timePoint) const { return this->GetMinimumTimePoint() <= timePoint && timePoint < this->GetMaximumTimePoint(); } bool mitk::ProportionalTimeGeometry::IsValidTimeStep (TimeStepType timeStep) const { return 0 <= timeStep && timeStep < this->GetNumberOfTimeSteps(); } mitk::TimePointType mitk::ProportionalTimeGeometry::TimeStepToTimePoint( TimeStepType timeStep) const { if (m_FirstTimePoint <= std::numeric_limits::min() || m_FirstTimePoint >= std::numeric_limits::max() || m_StepDuration <= std::numeric_limits::min() || m_StepDuration >= std::numeric_limits::max()) { return static_cast(timeStep); } return m_FirstTimePoint + timeStep * m_StepDuration; } mitk::TimeStepType mitk::ProportionalTimeGeometry::TimePointToTimeStep( TimePointType timePoint) const { if (m_FirstTimePoint <= timePoint) return static_cast((timePoint -m_FirstTimePoint) / m_StepDuration); else return 0; } mitk::Geometry3D* mitk::ProportionalTimeGeometry::GetGeometryForTimeStep( TimeStepType timeStep) const { if (IsValidTimeStep(timeStep)) { return dynamic_cast(m_GeometryVector[timeStep].GetPointer()); } else { return NULL; } } mitk::Geometry3D* mitk::ProportionalTimeGeometry::GetGeometryForTimePoint(TimePointType timePoint) const { - TimeStepType timeStep = this->TimePointToTimeStep(timePoint); - return this->GetGeometryForTimeStep(timeStep); + if (this->IsValidTimePoint(timePoint)) + { + TimeStepType timeStep = this->TimePointToTimeStep(timePoint); + return this->GetGeometryForTimeStep(timeStep); + } + else + return NULL; } mitk::Geometry3D::Pointer mitk::ProportionalTimeGeometry::GetGeometryCloneForTimeStep( TimeStepType timeStep) const { if (timeStep > m_GeometryVector.size()) return 0; return m_GeometryVector[timeStep]->Clone(); } bool mitk::ProportionalTimeGeometry::IsValid() { bool isValid = true; isValid &= m_GeometryVector.size() > 0; isValid &= m_StepDuration > 0; return isValid; } void mitk::ProportionalTimeGeometry::ClearAllGeometries() { m_GeometryVector.clear(); } void mitk::ProportionalTimeGeometry::ReserveSpaceForGeometries(TimeStepType numberOfGeometries) { m_GeometryVector.reserve(numberOfGeometries); } void mitk::ProportionalTimeGeometry::Expand(mitk::TimeStepType size) { m_GeometryVector.reserve(size); while (m_GeometryVector.size() < size) { m_GeometryVector.push_back(Geometry3D::New()); } } void mitk::ProportionalTimeGeometry::SetTimeStepGeometry(Geometry3D *geometry, TimeStepType timeStep) { assert(timeStep<=m_GeometryVector.size()); assert(timeStep >= 0); if (timeStep == m_GeometryVector.size()) m_GeometryVector.push_back(geometry); m_GeometryVector[timeStep] = geometry; } itk::LightObject::Pointer mitk::ProportionalTimeGeometry::InternalClone() const { ProportionalTimeGeometry::Pointer newTimeGeometry = ProportionalTimeGeometry::New(); newTimeGeometry->m_BoundingBox = m_BoundingBox->DeepCopy(); newTimeGeometry->m_FirstTimePoint = this->m_FirstTimePoint; newTimeGeometry->m_StepDuration = this->m_StepDuration; newTimeGeometry->m_GeometryVector.clear(); newTimeGeometry->Expand(this->GetNumberOfTimeSteps()); for (TimeStepType i =0; i < GetNumberOfTimeSteps(); ++i) { Geometry3D::Pointer tempGeometry = GetGeometryForTimeStep(i)->Clone(); newTimeGeometry->SetTimeStepGeometry(tempGeometry.GetPointer(),i); } itk::LightObject::Pointer finalPointer = dynamic_cast(newTimeGeometry.GetPointer()); return finalPointer; } void mitk::ProportionalTimeGeometry::Initialize (Geometry3D * geometry, TimeStepType timeSteps) { timeSteps = (timeSteps > 0) ? timeSteps : 1; m_FirstTimePoint = geometry->GetTimeBounds()[0]; m_StepDuration = geometry->GetTimeBounds()[1] - geometry->GetTimeBounds()[0]; this->ReserveSpaceForGeometries(timeSteps); try{ for (TimeStepType currentStep = 0; currentStep < timeSteps; ++currentStep) { mitk::TimeBounds timeBounds; if (timeSteps > 1) { timeBounds[0] = m_FirstTimePoint + currentStep * m_StepDuration; timeBounds[1] = m_FirstTimePoint + (currentStep+1) * m_StepDuration; } else { timeBounds = geometry->GetTimeBounds(); } Geometry3D::Pointer clonedGeometry = geometry->Clone(); this->SetTimeStepGeometry(clonedGeometry.GetPointer(), currentStep); GetGeometryForTimeStep(currentStep)->SetTimeBounds(timeBounds); } } catch (...) { MITK_INFO << "Cloning of geometry produced an error!"; } Update(); } void mitk::ProportionalTimeGeometry::Initialize (TimeStepType timeSteps) { mitk::Geometry3D::Pointer geometry = mitk::Geometry3D::New(); geometry->Initialize(); if ( timeSteps > 1 ) { mitk::ScalarType timeBounds[] = {0.0, 1.0}; geometry->SetTimeBounds( timeBounds ); } this->Initialize(geometry.GetPointer(), timeSteps); } diff --git a/Core/Code/Testing/mitkTimeGeometryTest.cpp b/Core/Code/Testing/mitkTimeGeometryTest.cpp index f568f97b77..c04cadc657 100644 --- a/Core/Code/Testing/mitkTimeGeometryTest.cpp +++ b/Core/Code/Testing/mitkTimeGeometryTest.cpp @@ -1,755 +1,752 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "mitkTimeGeometry.h" #include "mitkGeometry3D.h" #include "mitkRotationOperation.h" #include "mitkInteractionConst.h" #include #include #include "mitkTestingMacros.h" #include #include #include #include "mitkImageGenerator.h" #include "mitkPointSet.h" #include class mitkTimeGeometryTestClass { public: - void Translation_Image_MovedOrigin(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) + void Translation_Image_MovedOrigin(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { // DimX, DimY, DimZ, mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); - mitk::Geometry3D::Pointer geometry = baseData->GetTimeGeometry()->GetGeometryForTimeStep(0); + mitk::Geometry3D::Pointer geometry = image->GetTimeGeometry()->GetGeometryForTimeStep(0); mitk::Point3D imageOrigin = geometry->GetOrigin(); mitk::Point3D expectedOrigin; expectedOrigin[0] = 0; expectedOrigin[1] = 0; expectedOrigin[2] = 0; MITK_TEST_CONDITION(mitk::Equal(imageOrigin, expectedOrigin), "Original origin match expected origin"); expectedOrigin[0] = 0.325; expectedOrigin[1] = 0.487; expectedOrigin[2] = 0.78; mitk::Vector3D translationVector; translationVector[0] = expectedOrigin[0]; translationVector[1] = expectedOrigin[1]; translationVector[2] = expectedOrigin[2]; for (mitk::TimeStepType timeStep = 0; timeStep < image->GetTimeGeometry()->GetNumberOfTimeSteps(); ++timeStep) { image->GetTimeGeometry()->GetGeometryForTimeStep(timeStep)->Translate(translationVector); } imageOrigin = image->GetGeometry(0)->GetOrigin(); MITK_TEST_CONDITION(mitk::Equal(imageOrigin, expectedOrigin), "Translated origin match expected origin"); expectedOrigin[0] = 2*translationVector[0]; expectedOrigin[1] = 2*translationVector[1]; expectedOrigin[2] = 2*translationVector[2]; for (mitk::TimeStepType timeStep = 0; timeStep < image->GetTimeGeometry()->GetNumberOfTimeSteps(); ++timeStep) { image->GetTimeGeometry()->GetGeometryForTimeStep(timeStep)->Translate(translationVector); } imageOrigin = image->GetGeometry(0)->GetOrigin(); MITK_TEST_CONDITION(mitk::Equal(imageOrigin, expectedOrigin), "Translated origin match expected origin"); } void Rotate_Image_RotatedPoint(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::StandaloneDataStorage::Pointer ds = mitk::StandaloneDataStorage::New(); mitk::DataNode::Pointer dataNode = mitk::DataNode::New(); // DimX, DimY, DimZ, dataNode->SetData(baseData); ds->Add(dataNode); mitk::Geometry3D::Pointer geometry = baseData->GetTimeGeometry()->GetGeometryForTimeStep(0); mitk::Point3D expectedPoint; expectedPoint[0] = 3*0.5; expectedPoint[1] = 3*0.33; expectedPoint[2] = 3*0.78; mitk::Point3D originalPoint; originalPoint[0] = 3; originalPoint[1] = 3; originalPoint[2] = 3; mitk::Point3D worldPoint; geometry->IndexToWorld(originalPoint, worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Index-to-World without rotation as expected "); mitk::Point3D pointOfRotation; pointOfRotation[0] = 0; pointOfRotation[1] = 0; pointOfRotation[2] = 0; mitk::Vector3D vectorOfRotation; vectorOfRotation[0] = 1; vectorOfRotation[1] = 0.5; vectorOfRotation[2] = 0.2; float angleOfRotation = 73.0; mitk::RotationOperation* rotation = new mitk::RotationOperation(mitk::OpROTATE,pointOfRotation, vectorOfRotation, angleOfRotation); baseData->GetTimeGeometry()->ExecuteOperation(rotation); delete rotation; expectedPoint[0] = 2.6080379; expectedPoint[1] = -0.75265157; expectedPoint[2] = 1.1564401; baseData->GetGeometry(0)->IndexToWorld(originalPoint,worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Rotation returns expected values "); } void Scale_Image_ScaledPoint(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { // DimX, DimY, DimZ, mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::Geometry3D::Pointer geometry = image->GetTimeGeometry()->GetGeometryForTimeStep(0); mitk::Point3D expectedPoint; expectedPoint[0] = 3*0.5; expectedPoint[1] = 3*0.33; expectedPoint[2] = 3*0.78; mitk::Point3D originalPoint; originalPoint[0] = 3; originalPoint[1] = 3; originalPoint[2] = 3; mitk::Point3D worldPoint; geometry->IndexToWorld(originalPoint, worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Index-to-World with old Scaling as expected "); mitk::Vector3D newSpacing; newSpacing[0] = 2; newSpacing[1] = 1.254; newSpacing[2] = 0.224; image->SetSpacing(newSpacing); - + mitk::BaseData* base; expectedPoint[0] = 3*2; expectedPoint[1] = 3*1.254; expectedPoint[2] = 3*0.224; image->GetGeometry(0)->IndexToWorld(originalPoint,worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Index-toWorld with new Scaling returns expected values "); } - void GetMinimumTimePoint_4DImage_Zero(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) + void GetMinimumTimePoint_4DBaseData_Zero(mitk::BaseData* baseData, unsigned int DimT) { - mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); - mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); + baseData->Update(); + mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimePointType expectedTimePoint = geometry->GetMinimumTimePoint(); MITK_TEST_CONDITION(mitk::Equal(expectedTimePoint, 0), "Returns correct minimum time point "); } - void GetMaximumTimePoint_4DImage_DimT(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) + void GetMaximumTimePoint_4DBaseData_DimT(mitk::BaseData* baseData, unsigned int DimT) { - mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); - mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); + baseData->Update(); + mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimePointType expectedTimePoint = geometry->GetMaximumTimePoint(); MITK_TEST_CONDITION(mitk::Equal(expectedTimePoint, DimT), "Returns correct maximum time point "); } void GetNumberOfTimeSteps_Image_ReturnDimT(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimeStepType expectedTimeSteps = geometry->GetNumberOfTimeSteps(); MITK_TEST_CONDITION(mitk::Equal(expectedTimeSteps, DimT), "Returns correct number of time Steps "); } void GetMinimumTimePoint_3DImage_Min(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimePointType expectedTimePoint = geometry->GetMinimumTimePoint(); MITK_TEST_CONDITION(mitk::Equal(expectedTimePoint, -std::numeric_limits().max()), "Returns correct minimum time point "); } void GetMaximumTimePoint_3DImage_Max(mitk::BaseData* baseData,unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimePointType expectedTimePoint = geometry->GetMaximumTimePoint(); MITK_INFO << expectedTimePoint; MITK_INFO << std::numeric_limits().max(); MITK_TEST_CONDITION(mitk::Equal(expectedTimePoint, std::numeric_limits().max()), "Returns correct maximum time point "); } void GetTimeBounds_4DImage_ZeroAndDimT(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); mitk::TimeBounds expectedTimeBounds = geometry->GetTimeBounds(); MITK_TEST_CONDITION(mitk::Equal(expectedTimeBounds[0], 0), "Returns correct minimum time point "); MITK_TEST_CONDITION(mitk::Equal(expectedTimeBounds[1], DimT), "Returns correct maximum time point "); } void GetTimeBounds_3DImage_ZeroAndDimT(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { + baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimeBounds expectedTimeBounds = geometry->GetTimeBounds(); MITK_TEST_CONDITION(mitk::Equal(expectedTimeBounds[0], -std::numeric_limits().max()), "Returns correct minimum time point "); MITK_TEST_CONDITION(mitk::Equal(expectedTimeBounds[1], std::numeric_limits().max()), "Returns correct maximum time point "); } void IsValidTimePoint_ImageValidTimePoint_True(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { - mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); - mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); + baseData->Update(); + mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); bool isValid = geometry->IsValidTimePoint(DimT-1); MITK_TEST_CONDITION(mitk::Equal(isValid, true), "Is valid time Point correct minimum time point "); } void IsValidTimePoint_ImageNegativInvalidTimePoint_False(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); bool isValid = geometry->IsValidTimePoint(-DimT); MITK_TEST_CONDITION(mitk::Equal(isValid, false), "Is invalid time Point correct minimum time point "); } void IsValidTimePoint_ImageInvalidTimePoint_False(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); bool isValid = geometry->IsValidTimePoint(DimT+1); MITK_TEST_CONDITION(mitk::Equal(isValid, false), "Is invalid time Point correct minimum time point "); } void IsValidTimeStep_ImageValidTimeStep_True(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); bool isValid = geometry->IsValidTimeStep(DimT-1); MITK_TEST_CONDITION(mitk::Equal(isValid, true), "Is valid time Point correct minimum time point "); } void IsValidTimeStep_ImageNegativInvalidTimeStep_False(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); bool isValid = geometry->IsValidTimeStep(-DimT); MITK_TEST_CONDITION(mitk::Equal(isValid, false), "Is invalid time Point correct minimum time point "); } void IsValidTimeStep_ImageInvalidTimeStep_False(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); bool isValid = geometry->IsValidTimeStep(DimT); MITK_TEST_CONDITION(mitk::Equal(isValid, false), "Is invalid time Point correct minimum time point "); } void TimeStepToTimePoint_ImageValidTimeStep_TimePoint(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimePointType timePoint= geometry->TimeStepToTimePoint(DimT-1); MITK_TEST_CONDITION(mitk::Equal(timePoint, DimT-1), "Calculated right time Point for Time Step "); } void TimeStepToTimePoint_ImageInvalidTimeStep_TimePoint(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimePointType timePoint= geometry->TimeStepToTimePoint(DimT+1); MITK_TEST_CONDITION(mitk::Equal(timePoint, DimT+1), "Calculated right time Point for invalid Time Step "); } void TimePointToTimeStep_ImageValidTimePoint_TimePoint(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::TimeStepType timePoint= geometry->TimePointToTimeStep(DimT-0.5); MITK_TEST_CONDITION(mitk::Equal(timePoint, DimT-1), "Calculated right time step for valid time point"); } void TimePointToTimeStep_4DImageInvalidTimePoint_TimePoint(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); mitk::TimeStepType timePoint= geometry->TimePointToTimeStep(DimT+1.5); MITK_TEST_CONDITION(mitk::Equal(timePoint, DimT+1), "Calculated right time step for invalid time point"); } void TimePointToTimeStep_4DImageNegativInvalidTimePoint_TimePoint(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); mitk::TimePointType negativTimePoint = (-1.0*DimT) - 1.5; mitk::TimeStepType timePoint= geometry->TimePointToTimeStep(negativTimePoint); MITK_TEST_CONDITION(mitk::Equal(timePoint, 0), "Calculated right time step for negativ invalid time point"); } void GetGeometryForTimeStep_BaseDataValidTimeStep_CorrectGeometry(mitk::BaseData* baseData, float inputX, float inputY, float inputZ, float outputX, float outputY, float outputZ, unsigned int DimT) { baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryForTimeStep(DimT-1); MITK_TEST_CONDITION(geometry3D.IsNotNull(), "Non-zero geometry returned"); mitk::Point3D expectedPoint; expectedPoint[0] = outputX; expectedPoint[1] = outputY; expectedPoint[2] = outputZ; mitk::Point3D originalPoint; originalPoint[0] = inputX; originalPoint[1] = inputY; originalPoint[2] = inputZ; mitk::Point3D worldPoint; geometry3D->IndexToWorld(originalPoint, worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Geometry transformation match expection. "); } void GetGeometryForTimeStep_ImageInvalidTimeStep_NullPointer(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryForTimeStep(DimT+1); MITK_TEST_CONDITION(geometry3D.IsNull(), "Null-Pointer geometry returned"); } void GetGeometryForTimePoint_BaseDataValidTimePoint_CorrectGeometry(mitk::BaseData* baseData, float inputX, float inputY, float inputZ, float outputX, float outputY, float outputZ, unsigned int DimT) { baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryForTimePoint(DimT-0.5); MITK_TEST_CONDITION(geometry3D.IsNotNull(), "Non-zero geometry returned"); mitk::Point3D expectedPoint; expectedPoint[0] = outputX; expectedPoint[1] = outputY; expectedPoint[2] = outputZ; mitk::Point3D originalPoint; originalPoint[0] = inputX; originalPoint[1] = inputY; originalPoint[2] = inputZ; mitk::Point3D worldPoint; geometry3D->IndexToWorld(originalPoint, worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Geometry transformation match expection. "); } void GetGeometryForTimePoint_4DImageInvalidTimePoint_NullPointer(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryForTimePoint(DimT+1); MITK_TEST_CONDITION(geometry3D.IsNull(), "Null-Pointer geometry returned with invalid time point"); } void GetGeometryForTimePoint_4DImageNEgativInvalidTimePoint_NullPointer(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); mitk::TimePointType timePoint = (-1.0*(DimT)) -1; mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryForTimePoint(timePoint); MITK_TEST_CONDITION(geometry3D.IsNull(), "Null-Pointer geometry returned with invalid negativ time point"); } void GetGeometryCloneForTimeStep_BaseDataValidTimeStep_CorrectGeometry(mitk::BaseData* baseData, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryCloneForTimeStep(DimT-1); MITK_TEST_CONDITION(geometry3D.IsNotNull(), "Non-zero geometry returned"); mitk::Point3D expectedPoint; mitk::Point3D originalPoint; originalPoint[0] = 3; originalPoint[1] = 3; originalPoint[2] = 3; mitk::Point3D worldPoint; geometry3D->IndexToWorld(originalPoint, expectedPoint); mitk::Vector3D translationVector; translationVector[0] = 5; translationVector[1] = 8; translationVector[2] = 7; geometry3D->Translate(translationVector); geometry3D = geometry->GetGeometryForTimeStep(DimT-1); geometry3D->IndexToWorld(originalPoint, worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Geometry transformation not changed. "); } void GetGeometryCloneForTimeStep_ImageInvalidTimeStep_NullPointer(mitk::BaseData* baseData, unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryCloneForTimeStep(DimT+1); MITK_TEST_CONDITION(geometry3D.IsNull(), "Null-Pointer geometry returned"); } - void SetTimeStepGeometry_ImageValidTimeStep_CorrectGeometry(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) + void SetTimeStepGeometry_BaseDataValidTimeStep_CorrectGeometry(mitk::BaseData* baseData, float scaleX, float scaleY, float scaleZ, unsigned int DimT) { - mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); - mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); + baseData->Update(); + mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryCloneForTimeStep(DimT-1); MITK_TEST_CONDITION(geometry3D.IsNotNull(), "Non-zero geometry returned"); mitk::Vector3D translationVector; translationVector[0] = 5; translationVector[1] = 8; translationVector[2] = 7; geometry3D->Translate(translationVector); geometry->SetTimeStepGeometry(geometry3D,DimT-1); mitk::Point3D expectedPoint; - expectedPoint[0] = 3*0.5+5; - expectedPoint[1] = 3*0.33+8; - expectedPoint[2] = 3*0.78+7; + expectedPoint[0] = 3*scaleX+5; + expectedPoint[1] = 3*scaleY+8; + expectedPoint[2] = 3*scaleZ+7; mitk::Point3D originalPoint; originalPoint[0] = 3; originalPoint[1] = 3; originalPoint[2] = 3; mitk::Point3D worldPoint; geometry->GetGeometryForTimeStep(DimT-1)->IndexToWorld(originalPoint, worldPoint); MITK_TEST_CONDITION(mitk::Equal(worldPoint, expectedPoint), "Geometry transformation match expection. "); } void Expand_BaseDataDoubleSize_SizeChanged(mitk::BaseData* baseData, int DimT) { mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); MITK_TEST_CONDITION(geometry->GetNumberOfTimeSteps()==DimT, "Number of time Steps match expection. "); geometry->Expand(DimT * 2); MITK_TEST_CONDITION(geometry->GetNumberOfTimeSteps()==DimT*2, "Number of time Steps match expection. "); mitk::Geometry3D::Pointer geometry3D = geometry->GetGeometryForTimeStep(DimT*2 -1); MITK_TEST_CONDITION(geometry3D.IsNotNull(), "Non-zero geometry is generated. "); } - void CheckBounds_Image_PointsAsExpected(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) + void CheckBounds_BaseData_PointsAsExpected(mitk::BaseData* baseData, float minX, float minY, float minZ, float maxX, float maxY, float maxZ) { - mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); - mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); + baseData->Update(); + mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Point3D expectedPoint; - expectedPoint[0] = -0.5*0.5; - expectedPoint[1] = -0.5*0.33; - expectedPoint[2] = -0.5*0.78; + expectedPoint[0] = minX; + expectedPoint[1] = minY; + expectedPoint[2] = minZ; mitk::Point3D point = geometry->GetCornerPointInWorld(0); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 0 as expected "); point = geometry->GetCornerPointInWorld(true,true,true); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 0 as expected "); point = geometry->GetCornerPointInWorld(1); - expectedPoint[0] = -0.5*0.5; - expectedPoint[1] = -0.5*0.33; - expectedPoint[2] = 19.5*0.78; + expectedPoint[0] = minX; + expectedPoint[1] = minY; + expectedPoint[2] = maxZ; MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "GBounding Point 1 as expected "); point = geometry->GetCornerPointInWorld(true,true,false); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 1 as expected "); point = geometry->GetCornerPointInWorld(2); - expectedPoint[0] = -0.5*0.5; - expectedPoint[1] = 24.5*0.33; - expectedPoint[2] = -0.5*0.78; + expectedPoint[0] = minX; + expectedPoint[1] = maxY; + expectedPoint[2] = minZ; MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 2 as expected "); point = geometry->GetCornerPointInWorld(true,false,true); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 2 as expected "); point = geometry->GetCornerPointInWorld(3); - expectedPoint[0] = -0.5*0.5; - expectedPoint[1] = 24.5*0.33; - expectedPoint[2] = 19.5*0.78; + expectedPoint[0] = minX; + expectedPoint[1] = maxY; + expectedPoint[2] = maxZ; MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 3 as expected "); point = geometry->GetCornerPointInWorld(true,false,false); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 3 as expected "); point = geometry->GetCornerPointInWorld(4); - expectedPoint[0] = 29.5*0.5; - expectedPoint[1] = -0.5*0.33; - expectedPoint[2] = -0.5*0.78; + expectedPoint[0] = maxX; + expectedPoint[1] = minY; + expectedPoint[2] = minZ; MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 4 as expected "); point = geometry->GetCornerPointInWorld(false,true,true); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 4 as expected "); point = geometry->GetCornerPointInWorld(5); - expectedPoint[0] = 29.5*0.5; - expectedPoint[1] = -0.5*0.33; - expectedPoint[2] = 19.5*0.78; + expectedPoint[0] = maxX; + expectedPoint[1] = minY; + expectedPoint[2] = maxZ; MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 5 as expected "); point = geometry->GetCornerPointInWorld(false,true,false); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 5 as expected "); point = geometry->GetCornerPointInWorld(6); - expectedPoint[0] = 29.5*0.5; - expectedPoint[1] = 24.5*0.33; - expectedPoint[2] = -0.5*0.78; + expectedPoint[0] = maxX; + expectedPoint[1] = maxY; + expectedPoint[2] = minZ; MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 6 as expected "); point = geometry->GetCornerPointInWorld(false,false,true); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 6 as expected "); point = geometry->GetCornerPointInWorld(7); - expectedPoint[0] = 29.5*0.5; - expectedPoint[1] = 24.5*0.33; - expectedPoint[2] = 19.5*0.78; + expectedPoint[0] = maxX; + expectedPoint[1] = maxY; + expectedPoint[2] = maxZ; MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 7 as expected "); point = geometry->GetCornerPointInWorld(false,false,false); MITK_TEST_CONDITION(mitk::Equal(expectedPoint, point), "Bounding Point 7 as expected "); } void CheckLength_BaseData_AsExpected(mitk::BaseData* baseData, double length, double squareLength) { baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); double dimension = geometry->GetDiagonalLengthInWorld(); MITK_TEST_CONDITION(mitk::Equal(dimension,length ), "Length as expected "); dimension = geometry->GetDiagonalLength2InWorld(); MITK_TEST_CONDITION(mitk::Equal(dimension, squareLength ), "Square length as expected "); } void CheckPointInside_BaseDataPointInside_True(mitk::BaseData* baseData, float pointX, float pointY, float pointZ) { baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Point3D expectedPoint; expectedPoint[0] = pointX; expectedPoint[1] = pointY; expectedPoint[2] = pointZ; bool isInside = geometry->IsWorldPointInside(expectedPoint); MITK_TEST_CONDITION(isInside, "Point is inside Image..."); } void CheckPointInside_BaseDataPointOutside_False(mitk::BaseData* baseData, float pointX, float pointY, float pointZ) { baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::Point3D expectedPoint; expectedPoint[0] = pointX; expectedPoint[1] = pointY; expectedPoint[2] = pointZ; bool isInside = geometry->IsWorldPointInside(expectedPoint); MITK_TEST_CONDITION(!isInside, "Point is outside Image..."); } void CheckBounds_Image_AsSet(unsigned int DimX, unsigned int DimY, unsigned int DimZ, unsigned int DimT) { mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(DimX, DimY, DimZ, DimT,0.5,0.33,0.78,100); mitk::TimeGeometry::Pointer geometry = image->GetTimeGeometry(); mitk::BoundingBox::BoundsArrayType bound = geometry->GetBoundsInWorld(); bool isEqual = true; isEqual = isEqual && mitk::Equal(bound[0], -0.5*0.5); isEqual = isEqual && mitk::Equal(bound[1], 29.5*0.5); isEqual = isEqual && mitk::Equal(bound[2], -0.5*0.33); isEqual = isEqual && mitk::Equal(bound[3], 24.5*0.33); isEqual = isEqual && mitk::Equal(bound[4], -0.5*0.78); isEqual = isEqual && mitk::Equal(bound[5], 19.5*0.78); MITK_TEST_CONDITION(isEqual, "Bounds as precalculated..."); } void CheckBounds_BaseData_AsSet(mitk::BaseData* baseData, float minBoundX, float maxBoundX, float minBoundY, float maxBoundY, float minBoundZ, float maxBoundZ) { baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::BoundingBox::BoundsArrayType bound = geometry->GetBoundsInWorld(); bool isEqual = true; isEqual = isEqual && mitk::Equal(bound[0], minBoundX); isEqual = isEqual && mitk::Equal(bound[1], maxBoundX); isEqual = isEqual && mitk::Equal(bound[2], minBoundY); isEqual = isEqual && mitk::Equal(bound[3], maxBoundY); isEqual = isEqual && mitk::Equal(bound[4], minBoundZ); isEqual = isEqual && mitk::Equal(bound[5], maxBoundZ); MITK_TEST_CONDITION(isEqual, "Bounds as precalculated..."); } void CheckExtent_BaseData_AsSet(mitk::BaseData* baseData, double extentX, double extentY, double extentZ) { + baseData->Update(); mitk::TimeGeometry::Pointer geometry = baseData->GetTimeGeometry(); mitk::BoundingBox::BoundsArrayType bound = geometry->GetBoundsInWorld(); bool isEqual = true; isEqual = isEqual && mitk::Equal(geometry->GetExtentInWorld(0), extentX);//30*0.5); isEqual = isEqual && mitk::Equal(geometry->GetExtentInWorld(1), extentY);//25*0.33); isEqual = isEqual && mitk::Equal(geometry->GetExtentInWorld(2), extentZ);//20*0.78); MITK_TEST_CONDITION(isEqual, "Extent as precalculated..."); } mitk::PointSet::Pointer makePointset() { mitk::PointSet::Pointer pointSet = mitk::PointSet::New(); mitk::Point3D pointA, pointB, pointC; pointA.Fill(1); pointB.Fill(2); pointC.Fill(3); pointSet->SetPoint(1,pointA); pointSet->SetPoint(2,pointB); pointSet->SetPoint(3,pointC); pointSet->Update(); MITK_INFO<< pointSet->GetPoint(0); MITK_INFO<< pointSet->GetPoint(1); MITK_INFO<< pointSet->GetPoint(2); MITK_INFO<< pointSet->GetPoint(3); mitk::PointSet::Pointer pointSet2 = pointSet->Clone(); MITK_INFO<< pointSet2->GetPoint(0); MITK_INFO<< pointSet2->GetPoint(1); MITK_INFO<< pointSet2->GetPoint(2); MITK_INFO<< pointSet2->GetPoint(3); return pointSet; } }; int mitkTimeGeometryTest(int /*argc*/, char* /*argv*/[]) { MITK_TEST_BEGIN(mitkTimeGeometryTest); mitkTimeGeometryTestClass testClass; MITK_TEST_OUTPUT(<< "Test for 3D image"); mitk::Image::Pointer image = mitk::ImageGenerator::GenerateRandomImage(30, 25, 20, 1,0.5,0.33,0.78,100); - testClass.Translation_Image_MovedOrigin(image->Clone(),30,25,20,1); + testClass.Translation_Image_MovedOrigin(30,25,20,1); testClass.Rotate_Image_RotatedPoint(image->Clone(),30,25,20,1); testClass.Scale_Image_ScaledPoint(30,25,20,1); testClass.GetNumberOfTimeSteps_Image_ReturnDimT(image->Clone(),30,25,20,1); testClass.GetMinimumTimePoint_3DImage_Min(image->Clone(),30,25,20,1); testClass.GetMaximumTimePoint_3DImage_Max(image->Clone(),30,25,20,1); testClass.GetTimeBounds_3DImage_ZeroAndDimT(image->Clone(),30,25,20,1); testClass.IsValidTimePoint_ImageValidTimePoint_True(image->Clone(),30,25,20,1); testClass.IsValidTimeStep_ImageValidTimeStep_True(image->Clone(), 30,25,20,1); testClass.IsValidTimeStep_ImageNegativInvalidTimeStep_False(image->Clone(), 30,25,20,1); testClass.IsValidTimeStep_ImageInvalidTimeStep_False(image->Clone(), 30,25,20,1); testClass.TimeStepToTimePoint_ImageValidTimeStep_TimePoint(image->Clone(), 30,25,20,1); testClass.TimeStepToTimePoint_ImageInvalidTimeStep_TimePoint(image->Clone(), 30,25,20,1); testClass.TimePointToTimeStep_ImageValidTimePoint_TimePoint(image->Clone(), 30,25,20,1); testClass.GetGeometryForTimeStep_BaseDataValidTimeStep_CorrectGeometry(image->Clone(), 3,3,3,3*0.5,3*0.33,3*0.78,1); testClass.GetGeometryForTimeStep_ImageInvalidTimeStep_NullPointer(image->Clone(), 30,25,20,1); testClass.GetGeometryForTimePoint_BaseDataValidTimePoint_CorrectGeometry(image->Clone(), 3,3,3,3*0.5,3*0.33,3*0.78,1); testClass.GetGeometryCloneForTimeStep_BaseDataValidTimeStep_CorrectGeometry(image->Clone(),1); testClass.GetGeometryCloneForTimeStep_ImageInvalidTimeStep_NullPointer(image->Clone(), 30,25,20,1); - testClass.SetTimeStepGeometry_ImageValidTimeStep_CorrectGeometry(30,25,20,1); + testClass.SetTimeStepGeometry_BaseDataValidTimeStep_CorrectGeometry(image->Clone(),0.5,0.33,0.78,1); testClass.Expand_BaseDataDoubleSize_SizeChanged(image->Clone(),1); - testClass.CheckBounds_Image_PointsAsExpected(30,25,20,1); + testClass.CheckBounds_BaseData_PointsAsExpected(image->Clone(),-0.5*0.5,-0.5*0.33,-0.5*0.78,29.5*0.5,24.5*0.33,19.5*0.78); testClass.CheckLength_BaseData_AsExpected(image->Clone(), 23.160796233014466, 536.42248214721712); testClass.CheckPointInside_BaseDataPointInside_True(image->Clone(),10,5,5); testClass.CheckPointInside_BaseDataPointOutside_False(image->Clone(),100,500,100); testClass.CheckBounds_Image_AsSet(30,25,20,1); testClass.CheckExtent_BaseData_AsSet(image->Clone(), 30*0.5,25*0.33,20*0.78); /* MITK_TEST_OUTPUT(<< "Test for 2D image"); testClass.Translation_Image_MovedOrigin(30,25,1 ,1); // Test with 2D-Image testClass.Rotate_Image_RotatedPoint(30,25,1 ,1); // Test with 2D-Image testClass.Scale_Image_ScaledPoint(30,25,1 ,1); // Test with 2D-Image */ MITK_TEST_OUTPUT(<< "Test for 3D+time image"); image = mitk::ImageGenerator::GenerateRandomImage(30, 25, 20, 5,0.5,0.33,0.78,100); - testClass.Translation_Image_MovedOrigin(image->Clone(),30,25,20,5); // Test with 3D+t-Image + testClass.Translation_Image_MovedOrigin(30,25,20,5); // Test with 3D+t-Image testClass.Rotate_Image_RotatedPoint(image->Clone(),30,25,20,5); // Test with 3D+t-Image testClass.Scale_Image_ScaledPoint(30,25,20,5); // Test with 3D+t-Image testClass.GetNumberOfTimeSteps_Image_ReturnDimT(image->Clone(),30,25,20,5); - testClass.GetMinimumTimePoint_4DImage_Zero(30,25,20,5); - testClass.GetMaximumTimePoint_4DImage_DimT(30,25,20,5); + testClass.GetMinimumTimePoint_4DBaseData_Zero(image->Clone(),5); + testClass.GetMaximumTimePoint_4DBaseData_DimT(image->Clone(),5); testClass.GetTimeBounds_4DImage_ZeroAndDimT(30,25,20,5); testClass.IsValidTimePoint_ImageValidTimePoint_True(image->Clone(),30,25,20,5); testClass.IsValidTimePoint_ImageNegativInvalidTimePoint_False(30,25,20,5); testClass.IsValidTimePoint_ImageInvalidTimePoint_False(30,25,20,5); testClass.IsValidTimeStep_ImageValidTimeStep_True(image->Clone(), 30,25,20,5); testClass.IsValidTimeStep_ImageNegativInvalidTimeStep_False(image->Clone(), 30,25,20,5); testClass.IsValidTimeStep_ImageInvalidTimeStep_False(image->Clone(), 30,25,20,5); testClass.TimeStepToTimePoint_ImageValidTimeStep_TimePoint(image->Clone(), 30,25,20,5); testClass.TimeStepToTimePoint_ImageInvalidTimeStep_TimePoint(image->Clone(), 30,25,20,5); testClass.TimePointToTimeStep_ImageValidTimePoint_TimePoint(image->Clone(), 30,25,20,5); testClass.TimePointToTimeStep_4DImageInvalidTimePoint_TimePoint(30,25,20,5); testClass.TimePointToTimeStep_4DImageNegativInvalidTimePoint_TimePoint(30,25,20,5); testClass.GetGeometryForTimeStep_BaseDataValidTimeStep_CorrectGeometry(image->Clone(), 3,3,3,3*0.5,3*0.33,3*0.78,5); testClass.GetGeometryForTimeStep_ImageInvalidTimeStep_NullPointer(image->Clone(), 30,25,20,5); testClass.GetGeometryForTimePoint_BaseDataValidTimePoint_CorrectGeometry(image->Clone(), 3,3,3,3*0.5,3*0.33,3*0.78,5); testClass.GetGeometryForTimePoint_4DImageInvalidTimePoint_NullPointer(30,25,20,5); testClass.GetGeometryForTimePoint_4DImageNEgativInvalidTimePoint_NullPointer(30,25,20,5); testClass.GetGeometryCloneForTimeStep_BaseDataValidTimeStep_CorrectGeometry(image->Clone(),5); testClass.GetGeometryCloneForTimeStep_ImageInvalidTimeStep_NullPointer(image->Clone(), 30,25,20,5); - testClass.SetTimeStepGeometry_ImageValidTimeStep_CorrectGeometry(30,25,20,5); + testClass.SetTimeStepGeometry_BaseDataValidTimeStep_CorrectGeometry(image->Clone(),0.5,0.33,0.78,5); testClass.Expand_BaseDataDoubleSize_SizeChanged(image->Clone(),5); - testClass.CheckBounds_Image_PointsAsExpected(30,25,20,5); + testClass.CheckBounds_BaseData_PointsAsExpected(image->Clone(),-0.5*0.5,-0.5*0.33,-0.5*0.78,29.5*0.5,24.5*0.33,19.5*0.78); testClass.CheckLength_BaseData_AsExpected(image->Clone(), 23.160796233014466, 536.42248214721712); testClass.CheckPointInside_BaseDataPointInside_True(image->Clone(),10,5,5); testClass.CheckPointInside_BaseDataPointOutside_False(image->Clone(), 100,100,500); testClass.CheckBounds_Image_AsSet(30,25,20,5); testClass.CheckExtent_BaseData_AsSet(image->Clone(), 30*0.5,25*0.33,20*0.78); /* - MITK_TEST_OUTPUT(<< "Test for 2D+time image"); testClass.Translation_Image_MovedOrigin(30,25,1 ,5); // Test with 2D+t-Image testClass.Rotate_Image_RotatedPoint(30,25,1 ,5); // Test with 2D+t-Image testClass.Scale_Image_ScaledPoint(30,25,1 ,5); // Test with 2D+t-Image - */ mitk::PointSet::Pointer pointSet = mitk::PointSet::New(); mitk::Point3D pointA, pointB, pointC; pointA.Fill(1); pointB.Fill(2); pointC.Fill(3); pointSet->SetPoint(0,pointA); pointSet->SetPoint(1,pointB); pointSet->SetPoint(2,pointC); - testClass.Translation_Image_MovedOrigin(pointSet->Clone(),30,25,20,1); - //testClass.Rotate_Image_RotatedPoint(pointSet->Clone(),30,25,20,1); - //testClass.Scale_Image_ScaledPoint(30,25,20,1); testClass.GetNumberOfTimeSteps_Image_ReturnDimT(pointSet->Clone(),30,25,20,1); testClass.GetMinimumTimePoint_3DImage_Min(pointSet->Clone(),30,25,20,1); testClass.GetMaximumTimePoint_3DImage_Max(pointSet->Clone(),30,25,20,1); testClass.GetTimeBounds_3DImage_ZeroAndDimT(pointSet->Clone(),30,25,20,1); testClass.IsValidTimePoint_ImageValidTimePoint_True(pointSet->Clone(),30,25,20,1); testClass.IsValidTimeStep_ImageValidTimeStep_True(pointSet->Clone(),30,25,20,1); testClass.IsValidTimeStep_ImageNegativInvalidTimeStep_False(pointSet->Clone(),30,25,20,1); testClass.IsValidTimeStep_ImageInvalidTimeStep_False(pointSet->Clone(),30,25,20,1); testClass.TimeStepToTimePoint_ImageValidTimeStep_TimePoint(pointSet->Clone(),30,25,20,1); testClass.TimeStepToTimePoint_ImageInvalidTimeStep_TimePoint(pointSet->Clone(),30,25,20,1); testClass.TimePointToTimeStep_ImageValidTimePoint_TimePoint(pointSet->Clone(),30,25,20,1); testClass.GetGeometryForTimeStep_BaseDataValidTimeStep_CorrectGeometry(pointSet->Clone(), 3,3,3,3,3,3,1); testClass.GetGeometryForTimeStep_ImageInvalidTimeStep_NullPointer(pointSet->Clone(), 30,25,20,1); testClass.GetGeometryForTimePoint_BaseDataValidTimePoint_CorrectGeometry(pointSet->Clone(), 3,3,3,3,3,3,1); testClass.GetGeometryCloneForTimeStep_BaseDataValidTimeStep_CorrectGeometry(pointSet->Clone(),1); testClass.GetGeometryCloneForTimeStep_ImageInvalidTimeStep_NullPointer(pointSet->Clone(), 30,25,20,1); - //testClass.SetTimeStepGeometry_ImageValidTimeStep_CorrectGeometry(30,25,20,1); + testClass.SetTimeStepGeometry_BaseDataValidTimeStep_CorrectGeometry(pointSet->Clone(), 1,1,1,1); testClass.Expand_BaseDataDoubleSize_SizeChanged(pointSet->Clone(),1); - //testClass.CheckBounds_Image_PointsAsExpected(30,25,20,1); + testClass.CheckBounds_BaseData_PointsAsExpected(pointSet->Clone(),1,1,1,3,3,3); testClass.CheckLength_BaseData_AsExpected(pointSet->Clone(),3.46410161,12); testClass.CheckPointInside_BaseDataPointInside_True(pointSet->Clone(),2,2,3); testClass.CheckPointInside_BaseDataPointOutside_False(pointSet->Clone(),4,5,1); testClass.CheckBounds_BaseData_AsSet(pointSet->Clone(),1,3,1,3,1,3); testClass.CheckExtent_BaseData_AsSet(pointSet->Clone(),2,2,2 ); MITK_TEST_END(); return EXIT_SUCCESS; }