diff --git a/Plugins/org.mitk.gui.qt.dicom/src/internal/DicomEventHandler.cpp b/Plugins/org.mitk.gui.qt.dicom/src/internal/DicomEventHandler.cpp index 8d78fa5116..00a850f2d1 100644 --- a/Plugins/org.mitk.gui.qt.dicom/src/internal/DicomEventHandler.cpp +++ b/Plugins/org.mitk.gui.qt.dicom/src/internal/DicomEventHandler.cpp @@ -1,277 +1,277 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "mitkPluginActivator.h" #include "DicomEventHandler.h" #include #include #include #include #include #include #include #include #include #include #include "mitkImage.h" #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include #include DicomEventHandler::DicomEventHandler() { } DicomEventHandler::~DicomEventHandler() { } void DicomEventHandler::OnSignalAddSeriesToDataManager(const ctkEvent& ctkEvent) { QStringList listOfFilesForSeries; mitk::DicomSeriesReader::StringContainer seriesToLoad; listOfFilesForSeries = ctkEvent.getProperty("FilesForSeries").toStringList(); if (!listOfFilesForSeries.isEmpty()){ //for rt data, if the modality tag isnt defined or is "CT" the image is handled like before if(ctkEvent.containsProperty("Modality") && (ctkEvent.getProperty("Modality").toString().compare("RTDOSE",Qt::CaseInsensitive) == 0 || ctkEvent.getProperty("Modality").toString().compare("RTSTRUCT",Qt::CaseInsensitive) == 0)) { QString modality = ctkEvent.getProperty("Modality").toString(); if(modality.compare("RTDOSE",Qt::CaseInsensitive) == 0) { mitk::RTDoseReader::Pointer doseReader = mitk::RTDoseReader::New(); mitk::DataNode::Pointer doseImageNode = mitk::DataNode::New(); mitk::DataNode::Pointer doseOutlineNode = mitk::DataNode::New(); doseImageNode = doseReader->LoadRTDose(listOfFilesForSeries.at(0).toStdString().c_str()); doseOutlineNode->SetData(doseImageNode->GetData()); if(doseImageNode.IsNotNull() && doseOutlineNode->GetData() != NULL) { berry::IPreferencesService::Pointer prefService = berry::Platform::GetServiceRegistry().GetServiceById(berry::IPreferencesService::ID); berry::IPreferences::Pointer prefNode = prefService->GetSystemPreferences()->Node(mitk::RTUIConstants::ROOT_ISO_PRESETS_PREFERENCE_NODE_ID); typedef std::vector NamesType; NamesType names = prefNode->ChildrenNames(); std::map presetMap; for (NamesType::const_iterator pos = names.begin(); pos != names.end(); ++pos) { berry::IPreferences::Pointer aPresetNode = prefNode->Node(*pos); if (aPresetNode.IsNull()) { mitkThrow()<< "Error in preference interface. Cannot find preset node under given name. Name: "<<*pos; } mitk::IsoDoseLevelSet::Pointer levelSet = mitk::IsoDoseLevelSet::New(); NamesType levelNames = aPresetNode->ChildrenNames(); for (NamesType::const_iterator levelName = levelNames.begin(); levelName != levelNames.end(); ++levelName) { berry::IPreferences::Pointer levelNode = aPresetNode->Node(*levelName); if (aPresetNode.IsNull()) { mitkThrow()<< "Error in preference interface. Cannot find level node under given preset name. Name: "<<*pos<<"; Level id: "<<*levelName; } mitk::IsoDoseLevel::Pointer isoLevel = mitk::IsoDoseLevel::New(); isoLevel->SetDoseValue(levelNode->GetDouble(mitk::RTUIConstants::ISO_LEVEL_DOSE_VALUE_ID,0.0)); mitk::IsoDoseLevel::ColorType color; color.SetRed(levelNode->GetFloat(mitk::RTUIConstants::ISO_LEVEL_COLOR_RED_ID,1.0)); color.SetGreen(levelNode->GetFloat(mitk::RTUIConstants::ISO_LEVEL_COLOR_GREEN_ID,1.0)); color.SetBlue(levelNode->GetFloat(mitk::RTUIConstants::ISO_LEVEL_COLOR_BLUE_ID,1.0)); isoLevel->SetColor(color); isoLevel->SetVisibleIsoLine(levelNode->GetBool(mitk::RTUIConstants::ISO_LEVEL_VISIBILITY_ISOLINES_ID,true)); isoLevel->SetVisibleColorWash(levelNode->GetBool(mitk::RTUIConstants::ISO_LEVEL_VISIBILITY_COLORWASH_ID,true)); levelSet->SetIsoDoseLevel(isoLevel); } presetMap.insert(std::make_pair(*pos,levelSet)); } if (presetMap.size() == 0) { presetMap.insert(std::make_pair(std::string("Virtuos"), mitk::GeneratIsoLevels_Virtuos())); } double referenceDose = 40.0; //set some specific colorwash and isoline properties doseImageNode->SetBoolProperty(mitk::RTConstants::DOSE_SHOW_COLORWASH_PROPERTY_NAME.c_str(), true); doseOutlineNode->SetBoolProperty(mitk::RTConstants::DOSE_SHOW_ISOLINES_PROPERTY_NAME.c_str(), true); //Set reference dose property doseImageNode->SetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(), referenceDose); doseOutlineNode->SetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(), referenceDose); berry::IPreferences::Pointer nameNode = prefService->GetSystemPreferences()->Node(mitk::RTUIConstants::ROOT_DOSE_VIS_PREFERENCE_NODE_ID); std::string presetName = nameNode->Get(mitk::RTUIConstants::SELECTED_ISO_PRESET_ID,""); mitk::IsoDoseLevelSet::Pointer isoDoseLevelPreset = presetMap[presetName]; mitk::IsoDoseLevelSetProperty::Pointer levelSetProp = mitk::IsoDoseLevelSetProperty::New(isoDoseLevelPreset); doseImageNode->SetProperty(mitk::RTConstants::DOSE_ISO_LEVELS_PROPERTY_NAME.c_str(),levelSetProp); doseOutlineNode->SetProperty(mitk::RTConstants::DOSE_ISO_LEVELS_PROPERTY_NAME.c_str(),levelSetProp); mitk::IsoDoseLevelVector::Pointer levelVector = mitk::IsoDoseLevelVector::New(); mitk::IsoDoseLevelVectorProperty::Pointer levelVecProp = mitk::IsoDoseLevelVectorProperty::New(levelVector); doseImageNode->SetProperty(mitk::RTConstants::DOSE_FREE_ISO_VALUES_PROPERTY_NAME.c_str(),levelVecProp); doseOutlineNode->SetProperty(mitk::RTConstants::DOSE_FREE_ISO_VALUES_PROPERTY_NAME.c_str(),levelVecProp); //Generating the Colorwash vtkSmartPointer transferFunction = vtkSmartPointer::New(); for(mitk::IsoDoseLevelSet::ConstIterator itIsoDoseLevel = isoDoseLevelPreset->Begin(); itIsoDoseLevel != isoDoseLevelPreset->End(); ++itIsoDoseLevel) { float *hsv = new float[3]; //used for transfer rgb to hsv vtkSmartPointer cCalc = vtkSmartPointer::New(); if(itIsoDoseLevel->GetVisibleColorWash()){ cCalc->RGBToHSV(itIsoDoseLevel->GetColor()[0],itIsoDoseLevel->GetColor()[1],itIsoDoseLevel->GetColor()[2],&hsv[0],&hsv[1],&hsv[2]); transferFunction->AddHSVPoint(itIsoDoseLevel->GetDoseValue()*referenceDose,hsv[0],hsv[1],hsv[2],1.0,1.0); } } mitk::TransferFunction::Pointer mitkTransFunc = mitk::TransferFunction::New(); mitk::TransferFunctionProperty::Pointer mitkTransFuncProp = mitk::TransferFunctionProperty::New(); mitkTransFunc->SetColorTransferFunction(transferFunction); mitkTransFuncProp->SetValue(mitkTransFunc); mitk::RenderingModeProperty::Pointer renderingModeProp = mitk::RenderingModeProperty::New(); renderingModeProp->SetValue(mitk::RenderingModeProperty::COLORTRANSFERFUNCTION_COLOR); doseImageNode->SetProperty("Image Rendering.Transfer Function", mitkTransFuncProp); doseImageNode->SetProperty("Image Rendering.Mode", renderingModeProp); doseImageNode->SetProperty("opacity", mitk::FloatProperty::New(0.5)); //set the outline properties doseOutlineNode->SetBoolProperty("outline binary", true); doseOutlineNode->SetProperty( "helper object", mitk::BoolProperty::New(true) ); doseOutlineNode->SetProperty( "includeInBoundingBox", mitk::BoolProperty::New(false) ); ctkServiceReference serviceReference =mitk::PluginActivator::getContext()->getServiceReference(); mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService(serviceReference); mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage(); dataStorage->Add(doseImageNode); - dataStorage->Add(doseOutlineNode); + dataStorage->Add(doseOutlineNode, doseImageNode); //set the dose mapper for outline drawing; the colorwash is realized by the imagevtkmapper2D mitk::DoseImageVtkMapper2D::Pointer contourMapper = mitk::DoseImageVtkMapper2D::New(); doseOutlineNode->SetMapper(1,contourMapper); mitk::RenderingManager::GetInstance()->InitializeViewsByBoundingObjects(dataStorage); }//END DOSE } else if(modality.compare("RTSTRUCT",Qt::CaseInsensitive) == 0) { mitk::RTStructureSetReader::Pointer structreader = mitk::RTStructureSetReader::New(); std::deque modelVector = structreader->ReadStructureSet(listOfFilesForSeries.at(0).toStdString().c_str()); if(modelVector.empty()) { MITK_ERROR << "No structuresets were created" << endl; } else { ctkServiceReference serviceReference =mitk::PluginActivator::getContext()->getServiceReference(); mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService(serviceReference); mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage(); for(int i=0; iAdd(modelVector.at(i)); } mitk::RenderingManager::GetInstance()->InitializeViewsByBoundingObjects(dataStorage); } } } else { QStringListIterator it(listOfFilesForSeries); while (it.hasNext()) { seriesToLoad.push_back(it.next().toStdString()); } mitk::DataNode::Pointer node = mitk::DicomSeriesReader::LoadDicomSeries(seriesToLoad); if (node.IsNull()) { MITK_ERROR << "Error loading series: " << ctkEvent.getProperty("SeriesName").toString().toStdString() << " id: " <getServiceReference(); mitk::IDataStorageService* storageService = mitk::PluginActivator::getContext()->getService(serviceReference); mitk::DataStorage* dataStorage = storageService->GetDefaultDataStorage().GetPointer()->GetDataStorage(); dataStorage->Add(node); } } } else { MITK_INFO << "There are no files for the current series"; } } void DicomEventHandler::OnSignalRemoveSeriesFromStorage(const ctkEvent& ctkEvent) { } void DicomEventHandler::SubscribeSlots() { ctkServiceReference ref = mitk::PluginActivator::getContext()->getServiceReference(); if (ref) { ctkEventAdmin* eventAdmin = mitk::PluginActivator::getContext()->getService(ref); ctkDictionary properties; properties[ctkEventConstants::EVENT_TOPIC] = "org/mitk/gui/qt/dicom/ADD"; eventAdmin->subscribeSlot(this, SLOT(OnSignalAddSeriesToDataManager(ctkEvent)), properties); properties[ctkEventConstants::EVENT_TOPIC] = "org/mitk/gui/qt/dicom/DELETED"; eventAdmin->subscribeSlot(this, SLOT(OnSignalRemoveSeriesFromStorage(ctkEvent)), properties); } } diff --git a/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.cpp b/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.cpp index d710270bff..f7c015b01f 100644 --- a/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.cpp +++ b/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.cpp @@ -1,847 +1,785 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ // Qt #include #include // Blueberry #include #include // MITK #include #include #include // Qmitk #include "RTDoseVisualizer.h" #include #include #include #include #include #include #include #include #include #include #include "org_mitk_gui_qt_dosevisualization_Activator.h" #include #include #include #include #include "QmitkRenderWindow.h" #include #include "mitkSurfaceVtkMapper3D.h" #include "mitkSliceNavigationController.h" #include "vtkDecimatePro.h" const std::string RTDoseVisualizer::VIEW_ID = "org.mitk.views.rt.dosevisualization"; RTDoseVisualizer::RTDoseVisualizer() { - m_freeIsoValues = mitk::IsoDoseLevelVector::New(); - m_selectedNodeIsoSet = mitk::IsoDoseLevelSet::New(); + m_freeIsoValues = mitk::IsoDoseLevelVector::New(); + m_selectedNodeIsoSet = mitk::IsoDoseLevelSet::New(); - m_freeIsoFilter = vtkSmartPointer::New(); + m_freeIsoFilter = vtkSmartPointer::New(); - m_FreeIsoAdded = false; - m_selectedNode = NULL; - m_selectedPresetName = ""; - m_internalUpdate = false; - m_PrescribedDose_Data = 0.0; + m_FreeIsoAdded = false; + m_selectedNode = NULL; + m_selectedPresetName = ""; + m_internalUpdate = false; + m_PrescribedDose_Data = 0.0; } RTDoseVisualizer::~RTDoseVisualizer() { delete m_LevelSetModel; delete m_DoseColorDelegate; delete m_DoseValueDelegate; delete m_DoseVisualDelegate; } -void RTDoseVisualizer::InitScrolling(){ - QmitkRenderWindow* rw = this->GetRenderWindowPart()->GetQmitkRenderWindow("axial"); - - itk::MemberCommand::Pointer sliceChangedCommand = - itk::MemberCommand::New(); - sliceChangedCommand->SetCallbackFunction(this, &RTDoseVisualizer::OnSliceChanged); - rw->GetSliceNavigationController()->AddObserver(mitk::SliceNavigationController::GeometrySliceEvent(NULL,0), sliceChangedCommand); -} - void RTDoseVisualizer::SetFocus(){} void RTDoseVisualizer::OnSliceChanged(itk::Object *sender, const itk::EventObject &e) { for(int i=0; iRemove(m_StdIsoLines.at(i)); } m_StdIsoLines.clear(); this->UpdateStdIsolines(); if(m_FreeIsoAdded) { float pref; //get the iso dose node mitk::DataNode::Pointer isoNode = this->GetIsoDoseNode(); isoNode->GetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(),pref); mitk::Image::Pointer image = dynamic_cast(isoNode->GetData()); mitk::Image::Pointer slicedImage = this->GetExtractedSlice(image); m_Filters.at(0)->SetInputData(slicedImage->GetVtkImageData()); m_Filters.at(0)->GenerateValues(1,m_FreeIsoValue->GetDoseValue()*pref,m_FreeIsoValue->GetDoseValue()*pref); m_Filters.at(0)->Update(); m_FreeIsoline->GetData()->GetGeometry()->SetOrigin(slicedImage->GetGeometry()->GetOrigin()); mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } } mitk::DataNode::Pointer RTDoseVisualizer::GetIsoDoseNode() { //holt zuerst alle isonodes prüft dann auf visibility und nimmt zuletzt den mit dem höchsten layer mitk::NodePredicateProperty::Pointer isDosePredicate = mitk::NodePredicateProperty::New(mitk::RTConstants::DOSE_PROPERTY_NAME.c_str(),mitk::BoolProperty::New(true)); mitk::DataStorage::SetOfObjects::ConstPointer allIsoDoseNodes = this->GetDataStorage()->GetSubset(isDosePredicate); int tmp = -1; int layer = -1; mitk::DataNode::Pointer isoNode = mitk::DataNode::New(); for(mitk::DataStorage::SetOfObjects::ConstIterator itIsoDose = allIsoDoseNodes->Begin(); itIsoDose != allIsoDoseNodes->End(); ++itIsoDose) { bool isVisible(false); itIsoDose.Value()->GetBoolProperty("visible",isVisible); if(isVisible) { if(itIsoDose.Value()->GetIntProperty("layer",tmp) && tmp > layer) { isoNode = itIsoDose.Value(); } } } if(isoNode.IsNotNull()) return isoNode; else return NULL; } void RTDoseVisualizer::CreateQtPartControl( QWidget *parent ) { // create GUI widgets from the Qt Designer's .ui file m_Controls.setupUi( parent ); m_LevelSetModel = new QmitkIsoDoseLevelSetModel(this); m_LevelSetModel->setVisibilityEditOnly(true); m_DoseColorDelegate = new QmitkDoseColorDelegate(this); m_DoseValueDelegate = new QmitkDoseValueDelegate(this); m_DoseVisualDelegate = new QmitkDoseVisualStyleDelegate(this); this->UpdateByPreferences(); this->ActualizeIsoLevelsForAllDoseDataNodes(); this->ActualizeReferenceDoseForAllDoseDataNodes(); this->ActualizeDisplayStyleForAllDoseDataNodes(); this->m_Controls.isoLevelSetView->setModel(m_LevelSetModel); this->m_Controls.isoLevelSetView->setItemDelegateForColumn(0,m_DoseColorDelegate); this->m_Controls.isoLevelSetView->setItemDelegateForColumn(1,m_DoseValueDelegate); this->m_Controls.isoLevelSetView->setItemDelegateForColumn(2,m_DoseVisualDelegate); this->m_Controls.isoLevelSetView->setItemDelegateForColumn(3,m_DoseVisualDelegate); this->m_Controls.isoLevelSetView->setContextMenuPolicy(Qt::CustomContextMenu); this->m_Controls.btnRemoveFreeValue->setDisabled(true); - connect(m_Controls.btnConvert, SIGNAL(clicked()), this, SLOT(OnConvertButtonClicked())); connect(m_Controls.spinReferenceDose, SIGNAL(valueChanged(double)), this, SLOT(OnReferenceDoseChanged(double))); connect(m_Controls.spinReferenceDose, SIGNAL(valueChanged(double)), m_LevelSetModel, SLOT(setReferenceDose(double))); connect(m_Controls.radioAbsDose, SIGNAL(toggled(bool)), m_LevelSetModel, SLOT(setShowAbsoluteDose(bool))); connect(m_Controls.radioAbsDose, SIGNAL(toggled(bool)), this, SLOT(OnAbsDoseToggled(bool))); connect(m_Controls.btnAddFreeValue, SIGNAL(clicked()), this, SLOT(OnAddFreeValueClicked())); connect(m_Controls.btnRemoveFreeValue, SIGNAL(clicked()), this, SLOT(OnRemoveFreeValueClicked())); connect(m_Controls.checkGlobalVisColorWash, SIGNAL(toggled(bool)), this, SLOT(OnGlobalVisColorWashToggled(bool))); connect(m_Controls.checkGlobalVisIsoLine, SIGNAL(toggled(bool)), this, SLOT(OnGlobalVisIsoLineToggled(bool))); connect(m_Controls.isoLevelSetView, SIGNAL(customContextMenuRequested(const QPoint&)), this, SLOT(OnShowContextMenuIsoSet(const QPoint&))); connect(m_Controls.comboPresets, SIGNAL(currentIndexChanged ( const QString&)), this, SLOT(OnCurrentPresetChanged(const QString&))); connect(m_Controls.btnUsePrescribedDose, SIGNAL(clicked()), this, SLOT(OnUsePrescribedDoseClicked())); ctkServiceReference ref = mitk::org_mitk_gui_qt_dosevisualization_Activator::GetContext()->getServiceReference(); ctkDictionary propsForSlot; if (ref) { ctkEventAdmin* eventAdmin = mitk::org_mitk_gui_qt_dosevisualization_Activator::GetContext()->getService(ref); propsForSlot[ctkEventConstants::EVENT_TOPIC] = mitk::RTCTKEventConstants::TOPIC_ISO_DOSE_LEVEL_PRESETS_CHANGED.c_str(); eventAdmin->subscribeSlot(this, SLOT(OnHandleCTKEventPresetsChanged(ctkEvent)), propsForSlot); propsForSlot[ctkEventConstants::EVENT_TOPIC] = mitk::RTCTKEventConstants::TOPIC_REFERENCE_DOSE_CHANGED.c_str(); eventAdmin->subscribeSlot(this, SLOT(OnHandleCTKEventReferenceDoseChanged(ctkEvent)), propsForSlot); } this->UpdateBySelectedNode(); } void RTDoseVisualizer::OnReferenceDoseChanged(double value) { if (! m_internalUpdate) { mitk::DoseValueAbs referenceDose = 0.0; bool globalSync = mitk::GetReferenceDoseValue(referenceDose); if (globalSync) { mitk::SetReferenceDoseValue(globalSync, value); this->ActualizeReferenceDoseForAllDoseDataNodes(); } else { if (this->m_selectedNode.IsNotNull()) { this->m_selectedNode->SetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(), value); } } if (this->m_selectedNode.IsNotNull()) { mitk::TransferFunction::ControlPoints scalarOpacityPoints; scalarOpacityPoints.push_back( std::make_pair(0, 1 ) ); vtkSmartPointer transferFunction = vtkSmartPointer::New(); mitk::IsoDoseLevelSet::Pointer isoDoseLevelSet = this->m_Presets[this->m_selectedPresetName]; for(mitk::IsoDoseLevelSet::ConstIterator setIT = isoDoseLevelSet->Begin(); setIT != isoDoseLevelSet->End(); ++setIT) { float *hsv = new float[3]; vtkSmartPointer cCalc = vtkSmartPointer::New(); if(setIT->GetVisibleColorWash()){ cCalc->RGBToHSV(setIT->GetColor()[0],setIT->GetColor()[1],setIT->GetColor()[2],&hsv[0],&hsv[1],&hsv[2]); transferFunction->AddHSVPoint(setIT->GetDoseValue()*value,hsv[0],hsv[1],hsv[2],1.0,1.0); } else { scalarOpacityPoints.push_back( std::make_pair(setIT->GetDoseValue()*value, 1 ) ); } } mitk::TransferFunction::Pointer mitkTransFunc = mitk::TransferFunction::New(); mitk::TransferFunctionProperty::Pointer mitkTransFuncProp = mitk::TransferFunctionProperty::New(); mitkTransFunc->SetColorTransferFunction(transferFunction); mitkTransFunc->SetScalarOpacityPoints(scalarOpacityPoints); mitkTransFuncProp->SetValue(mitkTransFunc); mitk::RenderingModeProperty::Pointer renderingMode = mitk::RenderingModeProperty::New(); renderingMode->SetValue(mitk::RenderingModeProperty::COLORTRANSFERFUNCTION_COLOR); m_selectedNode->SetProperty("Image Rendering.Transfer Function", mitkTransFuncProp); m_selectedNode->SetProperty("opacity", mitk::FloatProperty::New(0.5)); mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } } } void RTDoseVisualizer::OnAddFreeValueClicked() { QColor newColor; //Use HSV schema of QColor to calculate a different color depending on the //number of already existing free iso lines. newColor.setHsv((m_freeIsoValues->Size()*85)%360,255,255); mitk::Color mColor; mColor[0]=newColor.redF(); mColor[1]=newColor.greenF(); mColor[2]=newColor.blueF(); mitk::DataNode::Pointer isoNode = this->UpdatePolyData(1,m_Controls.spinReferenceDose->value()*0.5,m_Controls.spinReferenceDose->value()*0.5); isoNode->SetColor(mColor); m_FreeIsoLines.push_back(isoNode); mitk::IsoDoseLevel::ColorType color; color[0] = newColor.redF(); color[1] = newColor.greenF(); color[2] = newColor.blueF(); m_freeIsoValues->push_back(mitk::IsoDoseLevel::New(0.5,color,true,false)); m_FreeIsoValue = mitk::IsoDoseLevel::New(0.5,color,true,false); UpdateFreeIsoValues(); mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); if(m_FreeIsoLines.size()>=1) { this->m_Controls.btnAddFreeValue->setDisabled(true); m_FreeIsoAdded = true; } this->m_Controls.btnRemoveFreeValue->setEnabled(true); } void RTDoseVisualizer::OnRemoveFreeValueClicked() { m_freeIsoValues->pop_back(); mitk::DataNode::Pointer isoNode = m_FreeIsoLines.at(m_FreeIsoLines.size()-1); m_FreeIsoLines.pop_back(); m_Filters.pop_back(); if(m_FreeIsoLines.empty()) this->m_Controls.btnRemoveFreeValue->setDisabled(true); if(m_FreeIsoLines.size()<1) { m_FreeIsoAdded = false; this->m_Controls.btnAddFreeValue->setEnabled(true); } this->GetDataStorage()->Remove(isoNode); UpdateFreeIsoValues(); } void RTDoseVisualizer::OnUsePrescribedDoseClicked() { m_Controls.spinReferenceDose->setValue(this->m_PrescribedDose_Data); } void RTDoseVisualizer::OnShowContextMenuIsoSet(const QPoint& pos) { QPoint globalPos = m_Controls.isoLevelSetView->viewport()->mapToGlobal(pos); QMenu viewMenu; QAction* invertIsoLineAct = viewMenu.addAction("Invert iso line visibility"); QAction* activateIsoLineAct = viewMenu.addAction("Activate all iso lines"); QAction* deactivateIsoLineAct = viewMenu.addAction("Deactivate all iso lines"); viewMenu.addSeparator(); QAction* invertColorWashAct = viewMenu.addAction("Invert color wash visibility"); QAction* activateColorWashAct = viewMenu.addAction("Activate all color wash levels"); QAction* deactivateColorWashAct = viewMenu.addAction("Deactivate all color wash levels"); viewMenu.addSeparator(); QAction* swapAct = viewMenu.addAction("Swap iso line/color wash visibility"); // ... QAction* selectedItem = viewMenu.exec(globalPos); if (selectedItem == invertIsoLineAct) { this->m_LevelSetModel->invertVisibilityIsoLines(); } else if (selectedItem == activateIsoLineAct) { this->m_LevelSetModel->switchVisibilityIsoLines(true); } else if (selectedItem == deactivateIsoLineAct) { this->m_LevelSetModel->switchVisibilityIsoLines(false); } else if (selectedItem == invertColorWashAct) { this->m_LevelSetModel->invertVisibilityColorWash(); } else if (selectedItem == activateColorWashAct) { this->m_LevelSetModel->switchVisibilityColorWash(true); } else if (selectedItem == deactivateColorWashAct) { this->m_LevelSetModel->switchVisibilityColorWash(false); } else if (selectedItem == swapAct) { this->m_LevelSetModel->swapVisibility(); } } void RTDoseVisualizer::UpdateFreeIsoValues() { this->m_Controls.listFreeValues->clear(); for (mitk::IsoDoseLevelVector::Iterator pos = this->m_freeIsoValues->Begin(); pos != this->m_freeIsoValues->End(); ++pos) { QListWidgetItem* item = new QListWidgetItem; item->setSizeHint(QSize(0,25)); QmitkFreeIsoDoseLevelWidget* widget = new QmitkFreeIsoDoseLevelWidget; float pref; m_selectedNode->GetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(),pref); widget->setIsoDoseLevel(pos->Value().GetPointer()); widget->setReferenceDose(pref); connect(m_Controls.spinReferenceDose, SIGNAL(valueChanged(double)), widget, SLOT(setReferenceDose(double))); connect(widget,SIGNAL(ColorChanged(mitk::IsoDoseLevel*)), this, SLOT(UpdateFreeIsoLineColor(mitk::IsoDoseLevel*))); connect(widget,SIGNAL(ValueChanged(mitk::IsoDoseLevel*,mitk::DoseValueRel)), this, SLOT(UpdateFreeIsoLine(mitk::IsoDoseLevel*,mitk::DoseValueRel))); this->m_Controls.listFreeValues->addItem(item); this->m_Controls.listFreeValues->setItemWidget(item,widget); } } void RTDoseVisualizer::UpdateFreeIsoLineColor(mitk::IsoDoseLevel *level) { //push it in and get the key! -// m_freeIsoValues + // m_freeIsoValues ::itk::RGBPixel color = level->GetColor(); mitk::Color mColor; mColor[0]=color.GetRed(); mColor[1]=color.GetGreen(); mColor[2]=color.GetBlue(); m_FreeIsoline->SetColor(mColor); } void RTDoseVisualizer::UpdateFreeIsoLine(mitk::IsoDoseLevel * level, mitk::DoseValueRel old) { float pref; m_selectedNode->GetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(),pref); mitk::Image::Pointer image = dynamic_cast(m_selectedNode->GetData()); mitk::Image::Pointer slicedImage = this->GetExtractedSlice(image); m_FreeIsoValue = level; -// m_freeIsoValues->at(0) = level; + // m_freeIsoValues->at(0) = level; m_Filters.at(0)->SetInputData(slicedImage->GetVtkImageData()); m_Filters.at(0)->GenerateValues(1,level->GetDoseValue()*pref,level->GetDoseValue()*pref); m_Filters.at(0)->Update(); mitk::RenderingManager::GetInstance()->RequestUpdateAll(); } void RTDoseVisualizer::OnAbsDoseToggled(bool showAbs) { if (! m_internalUpdate) { mitk::SetDoseDisplayAbsolute(showAbs); this->ActualizeDisplayStyleForAllDoseDataNodes(); } } void RTDoseVisualizer::OnGlobalVisColorWashToggled(bool showColorWash) { if (m_selectedNode.IsNotNull()) { m_selectedNode->SetBoolProperty(mitk::RTConstants::DOSE_SHOW_COLORWASH_PROPERTY_NAME.c_str(), showColorWash); - } -} + //The rendering mode could be set in the dose mapper: Refactoring! + mitk::RenderingModeProperty::Pointer renderingMode = mitk::RenderingModeProperty::New(); + if(showColorWash) + renderingMode->SetValue(mitk::RenderingModeProperty::COLORTRANSFERFUNCTION_COLOR); + else + renderingMode->SetValue(mitk::RenderingModeProperty::LOOKUPTABLE_LEVELWINDOW_COLOR); + m_selectedNode->SetProperty("Image Rendering.Mode", renderingMode); -void RTDoseVisualizer::OnGlobalVisIsoLineToggled(bool showIsoLines) -{ - if (m_selectedNode.IsNotNull()) - { - m_selectedNode->SetBoolProperty(mitk::Constants::DOSE_SHOW_ISOLINES_PROPERTY_NAME.c_str(), showIsoLines); - mitk::NodePredicateProperty::Pointer isoProp = mitk::NodePredicateProperty:: - New(mitk::Constants::DOSE_ISO_LEVELS_PROPERTY_NAME.c_str(), mitk::BoolProperty::New(true)); - mitk::DataStorage::SetOfObjects::ConstPointer isoSet = this->GetDataStorage()->GetSubset(isoProp); - for(mitk::DataStorage::SetOfObjects::ConstIterator iso = isoSet->Begin(); iso!=isoSet->End(); ++iso) - { - mitk::DataNode::Pointer node = iso.Value(); - node->SetVisibility(showIsoLines); - } mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); } } - -void RTDoseVisualizer::OnConvertButtonClicked() +void RTDoseVisualizer::OnGlobalVisIsoLineToggled(bool showIsoLines) { - this->InitScrolling(); - - QList dataNodes = this->GetDataManagerSelection(); - - mitk::DataNode* selectedNode = NULL; - - if (!dataNodes.empty()) - { - selectedNode = dataNodes[0]; - } - - bool isDoseNode = false; - if(selectedNode && selectedNode->GetBoolProperty(mitk::Constants::DOSE_PROPERTY_NAME.c_str(),isDoseNode) && isDoseNode) + if (m_selectedNode.IsNotNull()) { - selectedNode->SetBoolProperty(mitk::Constants::DOSE_PROPERTY_NAME.c_str(), true); - selectedNode->SetBoolProperty(mitk::Constants::DOSE_SHOW_COLORWASH_PROPERTY_NAME.c_str(), true); - selectedNode->SetBoolProperty(mitk::Constants::DOSE_SHOW_ISOLINES_PROPERTY_NAME.c_str(), true); - selectedNode->SetFloatProperty(mitk::Constants::REFERENCE_DOSE_PROPERTY_NAME.c_str(), m_Controls.spinReferenceDose->value()); - - mitk::IsoDoseLevelSet::Pointer clonedPreset = this->m_Presets[this->m_selectedPresetName]->Clone(); - mitk::IsoDoseLevelSetProperty::Pointer levelSetProp = mitk::IsoDoseLevelSetProperty::New(clonedPreset); - selectedNode->SetProperty(mitk::Constants::DOSE_ISO_LEVELS_PROPERTY_NAME.c_str(),levelSetProp); - - float prescribed; - m_selectedNode->GetFloatProperty(mitk::Constants::PRESCRIBED_DOSE_PROPERTY_NAME.c_str(),prescribed); + //ATM the IsoDoseContours have an own (helper) node which is a child of dose node; Will be fixed with the doseMapper refactoring + mitk::DataStorage::SetOfObjects::ConstPointer childNodes = this->GetDataStorage()->GetDerivations(m_selectedNode); + mitk::DataStorage::SetOfObjects::const_iterator iterChildNodes = childNodes->begin(); - vtkSmartPointer transferFunction = vtkSmartPointer::New(); - - mitk::IsoDoseLevelSet::Pointer isoDoseLevelSet = this->m_Presets[this->m_selectedPresetName]; - - float pref; - m_selectedNode->GetFloatProperty(mitk::Constants::REFERENCE_DOSE_PROPERTY_NAME.c_str(),pref); - - //Generating the Colorwash - for(mitk::IsoDoseLevelSet::ConstIterator setIT = isoDoseLevelSet->Begin(); setIT != isoDoseLevelSet->End(); ++setIT) + while (iterChildNodes != childNodes->end()) { - float *hsv = new float[3]; - //used for transfer rgb to hsv - vtkSmartPointer cCalc = vtkSmartPointer::New(); - if(setIT->GetVisibleColorWash()){ - cCalc->RGBToHSV(setIT->GetColor()[0],setIT->GetColor()[1],setIT->GetColor()[2],&hsv[0],&hsv[1],&hsv[2]); - transferFunction->AddHSVPoint(setIT->GetDoseValue()*pref,hsv[0],hsv[1],hsv[2],1.0,1.0); - } + (*iterChildNodes)->SetBoolProperty(mitk::RTConstants::DOSE_SHOW_ISOLINES_PROPERTY_NAME.c_str(), showIsoLines); + ++iterChildNodes; } - - //Generating the standard isolines - this->UpdateStdIsolines(); - - mitk::TransferFunction::Pointer mitkTransFunc = mitk::TransferFunction::New(); - mitk::TransferFunctionProperty::Pointer mitkTransFuncProp = mitk::TransferFunctionProperty::New(); - mitkTransFunc->SetColorTransferFunction(transferFunction); - mitkTransFuncProp->SetValue(mitkTransFunc); - - mitk::RenderingModeProperty::Pointer renderingMode = mitk::RenderingModeProperty::New(); - renderingMode->SetValue(mitk::RenderingModeProperty::COLORTRANSFERFUNCTION_COLOR); - - selectedNode->SetProperty("Image Rendering.Transfer Function", mitkTransFuncProp); - selectedNode->SetProperty("Image Rendering.Mode", renderingMode); - m_selectedNode->SetProperty("opacity", mitk::FloatProperty::New(0.5)); - - mitk::IsoDoseLevelVector::Pointer levelVector = mitk::IsoDoseLevelVector::New(); - mitk::IsoDoseLevelVectorProperty::Pointer levelVecProp = mitk::IsoDoseLevelVectorProperty::New(levelVector); - selectedNode->SetProperty(mitk::Constants::DOSE_FREE_ISO_VALUES_PROPERTY_NAME.c_str(),levelVecProp); - - UpdateBySelectedNode(); - - mitk::TimeGeometry::Pointer geo = this->GetDataStorage()->ComputeBoundingGeometry3D(this->GetDataStorage()->GetAll()); - mitk::RenderingManager::GetInstance()->InitializeViews( geo ); + mitk::RenderingManager::GetInstance()->ForceImmediateUpdateAll(); } } const mitk::Geometry2D* RTDoseVisualizer::GetGeometry2D(char* dim) { QmitkRenderWindow* rw = this->GetRenderWindowPart()->GetQmitkRenderWindow(dim); const mitk::Geometry2D* worldGeo = rw->GetRenderer()->GetCurrentWorldGeometry2D(); return worldGeo; } mitk::Image::Pointer RTDoseVisualizer::GetExtractedSlice(mitk::Image::Pointer image) { mitk::ExtractSliceFilter::Pointer extractFilter = mitk::ExtractSliceFilter::New(); extractFilter->SetInput(image); extractFilter->SetWorldGeometry(this->GetGeometry2D("axial")); extractFilter->SetResliceTransformByGeometry( image->GetTimeGeometry()->GetGeometryForTimeStep(0) ); extractFilter->Update(); mitk::Image::Pointer reslicedImage = extractFilter->GetOutput(); return reslicedImage; } mitk::DataNode::Pointer RTDoseVisualizer::UpdatePolyData(int num, double min, double max) { mitk::Image::Pointer image = dynamic_cast(m_selectedNode->GetData()); mitk::Image::Pointer reslicedImage = this->GetExtractedSlice(image); vtkSmartPointer contourFilter = vtkSmartPointer::New(); m_Filters.push_back(contourFilter); contourFilter->SetInputData(reslicedImage->GetVtkImageData()); contourFilter->GenerateValues(num,min,max); contourFilter->Update(); vtkSmartPointer polyData = vtkSmartPointer::New(); polyData =contourFilter->GetOutput(); mitk::Surface::Pointer isoline = mitk::Surface::New(); isoline->SetVtkPolyData(polyData); -// isoline->SetGeometry(reslicedImage->GetGeometry()->Clone()); + // isoline->SetGeometry(reslicedImage->GetGeometry()->Clone()); isoline->SetGeometry(reslicedImage->GetGeometry()); mitk::Vector3D spacing; spacing.Fill(1); isoline->GetGeometry()->SetSpacing(spacing); mitk::DataNode::Pointer isolineNode = mitk::DataNode::New(); isolineNode->SetData(isoline); mitk::SurfaceVtkMapper3D::Pointer mapper = mitk::SurfaceVtkMapper3D::New(); isolineNode->SetMapper(1, mapper); isolineNode->SetName("Isoline1"); isolineNode->SetProperty( "helper object", mitk::BoolProperty::New(true) ); isolineNode->SetProperty( "line width", mitk::IntProperty::New(1)); isolineNode->SetProperty("includeInBoundingBox", mitk::BoolProperty::New(false)); isolineNode->SetBoolProperty(mitk::RTConstants::DOSE_FREE_ISO_VALUES_PROPERTY_NAME.c_str(),true); m_FreeIsoline = isolineNode; this->GetDataStorage()->Add(isolineNode); return isolineNode; } void RTDoseVisualizer::UpdateStdIsolines() { bool isDoseNode = false; mitk::IsoDoseLevelSet::Pointer isoDoseLevelSet = this->m_Presets[this->m_selectedPresetName]; mitk::DataNode::Pointer isoDataNode = this->GetIsoDoseNode(); if(isoDataNode && isoDataNode->GetBoolProperty(mitk::RTConstants::DOSE_PROPERTY_NAME.c_str(),isDoseNode) && isDoseNode) { mitk::Image::Pointer image = dynamic_cast(isoDataNode->GetData()); mitk::Image::Pointer reslicedImage = this->GetExtractedSlice(image); reslicedImage->SetSpacing(image->GetGeometry()->GetSpacing()); float pref; isoDataNode->GetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(),pref); unsigned int count (0); for(mitk::IsoDoseLevelSet::ConstIterator doseIT = isoDoseLevelSet->Begin(); doseIT!=isoDoseLevelSet->End();++doseIT) { if(doseIT->GetVisibleIsoLine()){ ++count; vtkSmartPointer isolineFilter = vtkSmartPointer::New(); isolineFilter->SetInputData(reslicedImage->GetVtkImageData()); isolineFilter->GenerateValues(1,doseIT->GetDoseValue()*pref,doseIT->GetDoseValue()*pref); isolineFilter->Update(); vtkSmartPointer polyData = vtkSmartPointer::New(); polyData=isolineFilter->GetOutput(); mitk::Surface::Pointer surface = mitk::Surface::New(); surface->SetVtkPolyData(polyData); -// surface->SetGeometry(reslicedImage->GetGeometry()->Clone()); + // surface->SetGeometry(reslicedImage->GetGeometry()->Clone()); surface->SetGeometry(reslicedImage->GetGeometry()); mitk::Vector3D spacing; spacing.Fill(1); surface->GetGeometry()->SetSpacing(spacing); mitk::DataNode::Pointer isoNode = mitk::DataNode::New(); isoNode->SetData(surface); mitk::SurfaceVtkMapper3D::Pointer mapper = mitk::SurfaceVtkMapper3D::New(); mitk::Color color; color[0]=doseIT->GetColor()[0];color[1]=doseIT->GetColor()[1];color[2]=doseIT->GetColor()[2]; isoNode->SetMapper(1,mapper); isoNode->SetColor(color); isoNode->SetProperty( "helper object", mitk::BoolProperty::New(true) ); isoNode->SetProperty( "includeInBoundingBox", mitk::BoolProperty::New(false) ); isoNode->SetProperty( "line width", mitk::IntProperty::New(1)); std::stringstream strstr; strstr<<"StdIsoline_"; strstr<SetName(strstr.str()); isoNode->SetBoolProperty(mitk::RTConstants::DOSE_ISO_LEVELS_PROPERTY_NAME.c_str(),true); m_StdIsoLines.push_back(isoNode); this->GetDataStorage()->Add(isoNode, isoDataNode); } } } } void RTDoseVisualizer::OnSelectionChanged( berry::IWorkbenchPart::Pointer /*source*/, - const QList& nodes ) + const QList& nodes ) { QList dataNodes = this->GetDataManagerSelection(); mitk::DataNode* selectedNode = NULL; if (!dataNodes.empty()) { bool isDoseNode = false; dataNodes[0]->GetBoolProperty(mitk::RTConstants::DOSE_PROPERTY_NAME.c_str(),isDoseNode); if (isDoseNode) { selectedNode = dataNodes[0]; } } if (selectedNode != m_selectedNode.GetPointer()) { m_selectedNode = selectedNode; } UpdateBySelectedNode(); } void RTDoseVisualizer::UpdateBySelectedNode() { m_Controls.groupNodeSpecific->setEnabled(m_selectedNode.IsNotNull()); m_Controls.groupFreeValues->setEnabled(m_selectedNode.IsNotNull()); + m_Controls.checkGlobalVisColorWash->setEnabled(m_selectedNode.IsNotNull()); + m_Controls.checkGlobalVisIsoLine->setEnabled(m_selectedNode.IsNotNull()); + if(m_selectedNode.IsNull()) { m_Controls.NrOfFractions->setText(QString("N/A. No dose selected")); m_Controls.prescribedDoseSpecific->setText(QString("N/A. No dose selected")); m_freeIsoValues = mitk::IsoDoseLevelVector::New(); UpdateFreeIsoValues(); } else { //dose specific information int fracCount = 1; m_selectedNode->GetIntProperty(mitk::RTConstants::DOSE_FRACTION_COUNT_PROPERTY_NAME.c_str(),fracCount); m_Controls.NrOfFractions->setText(QString::number(fracCount)); m_PrescribedDose_Data = 0.0; float tmp; m_selectedNode->GetFloatProperty(mitk::RTConstants::PRESCRIBED_DOSE_PROPERTY_NAME.c_str(),tmp); m_PrescribedDose_Data = (double)tmp; m_Controls.prescribedDoseSpecific->setText(QString::number(m_PrescribedDose_Data)); //free iso lines mitk::IsoDoseLevelVectorProperty::Pointer propIsoVector; m_selectedNode->GetProperty(propIsoVector, mitk::RTConstants::DOSE_FREE_ISO_VALUES_PROPERTY_NAME.c_str()); if (propIsoVector.IsNull()) { m_freeIsoValues = mitk::IsoDoseLevelVector::New(); propIsoVector = mitk::IsoDoseLevelVectorProperty::New(m_freeIsoValues); m_selectedNode->SetProperty(mitk::RTConstants::DOSE_FREE_ISO_VALUES_PROPERTY_NAME.c_str(),propIsoVector); } else { m_freeIsoValues = propIsoVector->GetValue(); } UpdateFreeIsoValues(); //global dose issues + //ATM the IsoDoseContours have an own (helper) node which is a child of dose node; Will be fixed with the doseMapper refactoring bool showIsoLine = false; - m_selectedNode->GetBoolProperty(mitk::RTConstants::DOSE_SHOW_COLORWASH_PROPERTY_NAME.c_str(),showIsoLine); + mitk::DataStorage::SetOfObjects::ConstPointer childNodes = this->GetDataStorage()->GetDerivations(m_selectedNode); + mitk::DataStorage::SetOfObjects::const_iterator iterChildNodes = childNodes->begin(); + + while (iterChildNodes != childNodes->end()) + { + (*iterChildNodes)->GetBoolProperty(mitk::RTConstants::DOSE_SHOW_ISOLINES_PROPERTY_NAME.c_str(),showIsoLine); + if(showIsoLine) + break; + ++iterChildNodes; + } m_Controls.checkGlobalVisIsoLine->setChecked(showIsoLine); bool showColorWash = false; m_selectedNode->GetBoolProperty(mitk::RTConstants::DOSE_SHOW_COLORWASH_PROPERTY_NAME.c_str(),showColorWash); m_Controls.checkGlobalVisColorWash->setChecked(showColorWash); float referenceDose = 0.0; m_selectedNode->GetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(),referenceDose); m_Controls.spinReferenceDose->setValue(referenceDose); mitk::IsoDoseLevelSetProperty::Pointer propIsoSet = dynamic_cast(m_selectedNode->GetProperty(mitk::RTConstants::DOSE_ISO_LEVELS_PROPERTY_NAME.c_str())); if (propIsoSet) { this->m_selectedNodeIsoSet = propIsoSet->GetValue(); this->m_LevelSetModel->setIsoDoseLevelSet(m_selectedNodeIsoSet); } } } void RTDoseVisualizer::UpdateByPreferences() { m_Presets = mitk::LoadPresetsMap(); m_internalUpdate = true; m_Controls.comboPresets->clear(); this->m_selectedPresetName = mitk::GetSelectedPresetName(); int index = 0; int selectedIndex = -1; for (mitk::PresetMapType::const_iterator pos = m_Presets.begin(); pos != m_Presets.end(); ++pos, ++index) { m_Controls.comboPresets->addItem(QString(pos->first.c_str())); if (this->m_selectedPresetName == pos->first) { selectedIndex = index; } } if (selectedIndex == -1) { selectedIndex = 0; MITK_WARN << "Error. Cannot iso dose level preset specified in preferences does not exist. Preset name: "<m_selectedPresetName; this->m_selectedPresetName = m_Presets.begin()->first; mitk::SetSelectedPresetName(this->m_selectedPresetName); MITK_INFO << "Changed selected iso dose level preset to first existing preset. New preset name: "<m_selectedPresetName; } m_Controls.comboPresets->setCurrentIndex(selectedIndex); this->m_selectedNodeIsoSet = this->m_Presets[this->m_selectedPresetName]; this->m_LevelSetModel->setIsoDoseLevelSet(m_selectedNodeIsoSet); mitk::DoseValueAbs referenceDose = 0.0; bool globalSync = mitk::GetReferenceDoseValue(referenceDose); if (globalSync || this->m_selectedNode.IsNull()) { m_Controls.spinReferenceDose->setValue(referenceDose); } bool displayAbsoluteDose = mitk::GetDoseDisplayAbsolute(); m_Controls.radioAbsDose->setChecked(displayAbsoluteDose); m_Controls.radioRelDose->setChecked(!displayAbsoluteDose); this->m_LevelSetModel->setShowAbsoluteDose(displayAbsoluteDose); m_internalUpdate = false; } void RTDoseVisualizer::OnCurrentPresetChanged(const QString& presetName) { if (! m_internalUpdate) { mitk::SetSelectedPresetName(presetName.toStdString()); this->UpdateByPreferences(); this->ActualizeIsoLevelsForAllDoseDataNodes(); this->UpdateBySelectedNode(); } } void RTDoseVisualizer::ActualizeIsoLevelsForAllDoseDataNodes() { std::string presetName = mitk::GetSelectedPresetName(); mitk::PresetMapType presetMap = mitk::LoadPresetsMap(); mitk::NodePredicateProperty::Pointer isDoseNode = mitk::NodePredicateProperty::New(mitk::RTConstants::DOSE_PROPERTY_NAME.c_str(), mitk::BoolProperty::New(true)); mitk::DataStorage::SetOfObjects::ConstPointer nodes = this->GetDataStorage()->GetSubset(isDoseNode); mitk::IsoDoseLevelSet* selectedPreset = presetMap[presetName]; if (!selectedPreset) { mitkThrow() << "Error. Cannot actualize iso dose level preset. Selected preset idoes not exist. Preset name: "<begin(); pos != nodes->end(); ++pos) { mitk::IsoDoseLevelSet::Pointer clonedPreset = selectedPreset->Clone(); mitk::IsoDoseLevelSetProperty::Pointer propIsoSet = mitk::IsoDoseLevelSetProperty::New(clonedPreset); (*pos)->SetProperty(mitk::RTConstants::DOSE_ISO_LEVELS_PROPERTY_NAME.c_str(),propIsoSet); } } void RTDoseVisualizer::ActualizeReferenceDoseForAllDoseDataNodes() { /** @TODO Klären ob diese präsentations info genauso wie*/ mitk::DoseValueAbs value = 0; bool sync = mitk::GetReferenceDoseValue(value); if (sync) { mitk::NodePredicateProperty::Pointer isDoseNode = mitk::NodePredicateProperty::New(mitk::RTConstants::DOSE_PROPERTY_NAME.c_str(), mitk::BoolProperty::New(true)); mitk::DataStorage::SetOfObjects::ConstPointer nodes = this->GetDataStorage()->GetSubset(isDoseNode); for(mitk::DataStorage::SetOfObjects::const_iterator pos = nodes->begin(); pos != nodes->end(); ++pos) { (*pos)->SetFloatProperty(mitk::RTConstants::REFERENCE_DOSE_PROPERTY_NAME.c_str(), value); } } } void RTDoseVisualizer::ActualizeDisplayStyleForAllDoseDataNodes() { /** @TODO Klären ob diese präsentations info global oder auch per node gespeichert wird*/ } void RTDoseVisualizer::OnHandleCTKEventReferenceDoseChanged(const ctkEvent& event) { mitk::DoseValueAbs referenceDose = 0.0; bool globalSync = mitk::GetReferenceDoseValue(referenceDose); this->m_Controls.spinReferenceDose->setValue(referenceDose); } void RTDoseVisualizer::OnHandleCTKEventPresetsChanged(const ctkEvent& event) { std::string currentPresetName = mitk::GetSelectedPresetName(); this->OnCurrentPresetChanged(QString::fromStdString(currentPresetName)); } diff --git a/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.h b/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.h index 7bf7508217..407c7b7312 100644 --- a/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.h +++ b/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizer.h @@ -1,205 +1,201 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef RTDoseVisualizer_h #define RTDoseVisualizer_h #include #include #include #include "ui_RTDoseVisualizerControls.h" #include #include #include "mitkDoseVisPreferenceHelper.h" // Shader #include #include #include #include #include #include #include #include /*forward declarations*/ class QmitkIsoDoseLevelSetModel; class QmitkDoseColorDelegate; class QmitkDoseValueDelegate; class QmitkDoseVisualStyleDelegate; class ctkEvent; /** \brief RTDoseVisualizer \warning This class is not yet documented. Use "git blame" and ask the author to provide basic documentation. \sa QmitkAbstractView \ingroup ${plugin_target}_internal */ class RTDoseVisualizer : public QmitkAbstractView { // this is needed for all Qt objects that should have a Qt meta-object // (everything that derives from QObject and wants to have signal/slots) Q_OBJECT public: RTDoseVisualizer(); virtual ~RTDoseVisualizer(); static const std::string VIEW_ID; void OnSliceChanged(itk::Object *sender, const itk::EventObject &e); protected slots: - void OnConvertButtonClicked(); - void OnAddFreeValueClicked(); void OnRemoveFreeValueClicked(); void OnUsePrescribedDoseClicked(); void OnAbsDoseToggled(bool); void OnGlobalVisColorWashToggled(bool); void OnGlobalVisIsoLineToggled(bool); void OnShowContextMenuIsoSet(const QPoint&); void OnCurrentPresetChanged(const QString&); void OnReferenceDoseChanged(double); void OnHandleCTKEventReferenceDoseChanged(const ctkEvent& event); void OnHandleCTKEventPresetsChanged(const ctkEvent& event); void UpdateFreeIsoLine(mitk::IsoDoseLevel*level, mitk::DoseValueRel old); void UpdateFreeIsoLineColor(mitk::IsoDoseLevel* level); protected: - void InitScrolling(); - virtual void CreateQtPartControl(QWidget *parent); virtual void SetFocus(); /// \brief called by QmitkFunctionality when DataManager's selection has changed virtual void OnSelectionChanged( berry::IWorkbenchPart::Pointer source, const QList& nodes ); /** Method updates the list widget according to the current m_freeIsoValues.*/ void UpdateFreeIsoValues(); /** Update the members according to the currently selected node */ void UpdateBySelectedNode(); /** Update the member widgets according to the information stored in the application preferences*/ void UpdateByPreferences(); /**helper function that iterates throug all data nodes and sets there iso level set property according to the selected preset. @TODO: should be moved outside the class, to be available for other classes at well.*/ void ActualizeIsoLevelsForAllDoseDataNodes(); /**helper function that iterates throug all data nodes and sets there reference dose value according to the preference. @TODO: should be moved outside the class, to be available for other classes at well.*/ void ActualizeReferenceDoseForAllDoseDataNodes(); /**helper function that iterates through all data nodes and sets there dose display style (relative/absolute) according to the preference. @TODO: should be moved outside the class, to be available for other classes at well.*/ void ActualizeDisplayStyleForAllDoseDataNodes(); /** * @brief UpdatePolyData * @param num * @param min * @param max * @return */ mitk::DataNode::Pointer UpdatePolyData(int num, double min, double max); mitk::DataNode::Pointer GetIsoDoseNode(); /** * @brief Calculates the isolines for the dose image * Number, value and color depends on the selected preset */ void UpdateStdIsolines(); /** * @brief Get the active axial slice as 2D image * Uses a mitkExtractSliceFilter for getting the 2D slice of the * axial view * @param image the mitkImage which is shown in the axial window * @return the 2D mitkImage slice */ mitk::Image::Pointer GetExtractedSlice(mitk::Image::Pointer image); /** * @brief Get the mitkGeometry2D of a specific render window * @param dim the name of the render window * @return the mitkGeometry2D of the render window */ const mitk::Geometry2D* GetGeometry2D(char* dim); Ui::RTDoseVisualizerControls m_Controls; mitk::DataNode::Pointer m_selectedNode; mitk::IsoDoseLevel::Pointer m_FreeIsoValue; mitk::IsoDoseLevelVector::Pointer m_freeIsoValues; std::vector m_FreeIsoLines; std::vector m_StdIsoLines; /** Iso level set of the current node. Should normaly be a clone of the * current iso preset. It held as own member because visibility * settings may differ.*/ mitk::IsoDoseLevelSet::Pointer m_selectedNodeIsoSet; mitk::PresetMapType m_Presets; std::string m_selectedPresetName; mitk::DataNode::Pointer m_FreeIsoline; bool m_FreeIsoAdded; /** Prescribed Dose of the selected data.*/ mitk::DoseValueAbs m_PrescribedDose_Data; QmitkIsoDoseLevelSetModel* m_LevelSetModel; QmitkDoseColorDelegate* m_DoseColorDelegate; QmitkDoseValueDelegate* m_DoseValueDelegate; QmitkDoseVisualStyleDelegate* m_DoseVisualDelegate; vtkSmartPointer m_freeIsoFilter; std::vector< vtkSmartPointer > m_Filters; bool m_internalUpdate; }; #endif // RTDoseVisualizer_h diff --git a/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizerControls.ui b/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizerControls.ui index ad64bd4963..c783cb8fb3 100644 --- a/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizerControls.ui +++ b/Plugins/org.mitk.gui.qt.dosevisualization/src/internal/RTDoseVisualizerControls.ui @@ -1,514 +1,410 @@ RTDoseVisualizerControls 0 0 421 651 0 0 QmitkTemplate 5 - - 5 - - - 5 - - - 5 - - + 5 Dose specific information: 5 - - 5 - - - 5 - - - 5 - - + 5 Qt::Horizontal 40 20 true 30 Gy Qt::AlignLeading|Qt::AlignLeft|Qt::AlignVCenter true Number of fractions: Prescribed dose [Gy]: Use as reference dose true 0 0 Free iso lines: 5 - - 5 - - - 5 - - - 5 - - + 5 0 0 0 40 16777215 110 0 25 Qt::Horizontal 40 20 Add Remove Global iso dose visualization: 5 - - 5 - - - 5 - - - 5 - - + 5 0 0 65 0 Dose display: 0 0 65 0 Preset style: 0 0 105 0 Qt::NoFocus Reference dose [Gy]: 1 0.100000000000000 9999.000000000000000 0.100000000000000 relative [%] true absolute [Gy] false true QAbstractItemView::SingleSelection QAbstractItemView::SelectRows 30 20 80 Global visibility: Qt::Horizontal 40 20 - false + true Isolines :/RTUI/eye_open.png 24 16 + + false + - false + true Colorwash :/RTUI/eye_open.png 24 16 - - - - - - - - - 255 - 0 - 0 - - - - - - - 255 - 0 - 0 - - - - - - - - - 255 - 0 - 0 - - - - - - - 255 - 0 - 0 - - - - - - - - - 120 - 120 - 120 - - - - - - - 120 - 120 - 120 - - - - - - - - Convert node to dose node (for testing only!) - - -