diff --git a/Modules/IGT/Algorithms/mitkNeedleProjectionFilter.cpp b/Modules/IGT/Algorithms/mitkNeedleProjectionFilter.cpp index c17f4c486d..b9ba127934 100644 --- a/Modules/IGT/Algorithms/mitkNeedleProjectionFilter.cpp +++ b/Modules/IGT/Algorithms/mitkNeedleProjectionFilter.cpp @@ -1,197 +1,197 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ // MITK #include "mitkNeedleProjectionFilter.h" #include // VTK #include mitk::NeedleProjectionFilter::NeedleProjectionFilter() : m_Projection(mitk::PointSet::New()), m_OriginalPoints(mitk::PointSet::New()), m_ShowToolAxis(false), - m_SelectedInput(-1) + m_SelectedInput(0) { // Tool Coordinates: z-axis is chosen as default axis when no axis is specified MITK_DEBUG << "Constructor called"; mitk::Point3D toolAxis; - mitk::FillVector3D(toolAxis, 0, 0, 1); + mitk::FillVector3D(toolAxis, 0, 0, -1); m_ToolAxis = toolAxis; InitializeOriginalPoints(toolAxis, m_ShowToolAxis); MITK_DEBUG << "orginal point 0 set constructor" << m_OriginalPoints->GetPoint(0); MITK_DEBUG << "orginal point 1 set constructor" << m_OriginalPoints->GetPoint(1); } void mitk::NeedleProjectionFilter::InitializeOriginalPoints(mitk::Point3D toolAxis, bool showToolAxis) { m_OriginalPoints = mitk::PointSet::New(); mitk::Point3D projectionPoint; projectionPoint.SetElement(0, toolAxis.GetElement(0) * 400); projectionPoint.SetElement(1, toolAxis.GetElement(1) * 400); projectionPoint.SetElement(2, toolAxis.GetElement(2) * 400); m_OriginalPoints->InsertPoint(projectionPoint); mitk::Point3D toolOrigin; toolOrigin.SetElement(0, 0); toolOrigin.SetElement(1, 0); toolOrigin.SetElement(2, 0); m_OriginalPoints->InsertPoint(toolOrigin); if (showToolAxis) { mitk::Point3D axisPoint; axisPoint.SetElement(0, toolAxis.GetElement(0) * -400); axisPoint.SetElement(1, toolAxis.GetElement(1) * -400); axisPoint.SetElement(2, toolAxis.GetElement(2) * -400); m_OriginalPoints->InsertPoint(axisPoint); } } void mitk::NeedleProjectionFilter::ShowToolAxis(bool enabled) { m_ShowToolAxis = enabled; InitializeOriginalPoints(m_ToolAxis,m_ShowToolAxis); } void mitk::NeedleProjectionFilter::SetToolAxisForFilter(mitk::Point3D point) { m_ToolAxis = point; InitializeOriginalPoints(m_ToolAxis, m_ShowToolAxis); MITK_DEBUG << "orginal point 1 set mutator" << m_OriginalPoints->GetPoint(1); MITK_DEBUG << "orginal point 0 set mutator" << m_OriginalPoints->GetPoint(0); } mitk::NeedleProjectionFilter::~NeedleProjectionFilter() { } void mitk::NeedleProjectionFilter::SelectInput(int i) { if (i < 0) mitkThrow() << "Negative Input selected in NeedleProjectionFilter"; if (! (static_cast(i) < this->GetInputs().size())) mitkThrow() << "Selected input index is larger than actual number of inputs in NeedleProjectionFilter"; m_SelectedInput = i; } void mitk::NeedleProjectionFilter::GenerateData() { // copy the navigation data from the inputs to the outputs mitk::NavigationDataPassThroughFilter::GenerateData(); // If no reference has been set yet, warn and abort if (m_SelectedInput == -1) { MITK_INFO << "No input has been selected in NeedleProjection Filter. Only forwarding NavigationData..."; return; } // Cancel, if selected tool is currently not being tracked if (! GetInput(m_SelectedInput)->IsDataValid()) return; // Outputs have been updated, now to calculate the Projection // 1) Generate Pseudo-Geometry for Input mitk::AffineTransform3D::Pointer refTrans = this->NavigationDataToTransform(this->GetInput(m_SelectedInput)); mitk::Geometry3D::Pointer refGeom = this->TransformToGeometry(refTrans); // 2) Transform Original Pointset m_OriginalPoints->SetGeometry(refGeom); // Update Projection (We do not clone, since we want to keep properties alive) m_Projection->SetPoint(0, m_OriginalPoints->GetPoint(0)); m_Projection->SetPoint(1, m_OriginalPoints->GetPoint(1)); if (m_ShowToolAxis) { m_Projection->SetPoint(2, m_OriginalPoints->GetPoint(2)); } // 3a) If no target Plane has been set, then leave it at that if (this->m_TargetPlane.IsNull()) return; // 3b) else, calculate intersection with plane mitk::PlaneGeometry::Pointer plane = mitk::PlaneGeometry::New(); plane->SetIndexToWorldTransform(m_TargetPlane); //plane->TransferItkToVtkTransform(); //included in SetIndexToWorldTransform double t; double x[3]; // Points that define the needle vector double p1[3] = {m_OriginalPoints->GetPoint(0)[0], m_OriginalPoints->GetPoint(0)[1], m_OriginalPoints->GetPoint(0)[2]}; double p2[3] = {m_OriginalPoints->GetPoint(1)[0], m_OriginalPoints->GetPoint(1)[1], m_OriginalPoints->GetPoint(1)[2]}; // Center of image plane and it's normal double center[3] = {plane->GetCenter()[0], plane->GetCenter()[1], plane->GetCenter()[2]}; double normal[3] = {plane->GetNormal()[0], plane->GetNormal()[1], plane->GetNormal()[2]}; vtkPlane::IntersectWithLine(p1, p2, normal, center, t, x); // change (cut) needle path only if the needle points to the image plane; // otherwise the needle path direction would be changed pointing to the image plane if ( t >= 0 ) { // Convert vtk to itk mitk::Point3D intersection; intersection[0] = x[0]; intersection[1] = x[1]; intersection[2] = x[2]; // Replace distant point with image intersection m_Projection->SetPoint(0, intersection); } } mitk::AffineTransform3D::Pointer mitk::NeedleProjectionFilter::NavigationDataToTransform(const mitk::NavigationData * nd) { mitk::AffineTransform3D::Pointer affineTransform = mitk::AffineTransform3D::New(); affineTransform->SetIdentity(); //calculate the transform from the quaternions static itk::QuaternionRigidTransform::Pointer quatTransform = itk::QuaternionRigidTransform::New(); mitk::NavigationData::OrientationType orientation = nd->GetOrientation(); // convert mitk::ScalarType quaternion to double quaternion because of itk bug vnl_quaternion doubleQuaternion(orientation.x(), orientation.y(), orientation.z(), orientation.r()); quatTransform->SetIdentity(); quatTransform->SetRotation(doubleQuaternion); quatTransform->Modified(); /* because of an itk bug, the transform can not be calculated with float data type. To use it in the mitk geometry classes, it has to be transfered to mitk::ScalarType which is float */ static AffineTransform3D::MatrixType m; mitk::TransferMatrix(quatTransform->GetMatrix(), m); affineTransform->SetMatrix(m); /*set the offset by convert from itkPoint to itkVector and setting offset of transform*/ mitk::Vector3D pos; pos.SetVnlVector(nd->GetPosition().GetVnlVector()); affineTransform->SetOffset(pos); affineTransform->Modified(); return affineTransform; } mitk::Geometry3D::Pointer mitk::NeedleProjectionFilter::TransformToGeometry(mitk::AffineTransform3D::Pointer transform){ mitk::Geometry3D::Pointer g3d = mitk::Geometry3D::New(); mitk::ScalarType scale[] = {1.0, 1.0, 1.0}; g3d->SetSpacing(scale); g3d->SetIndexToWorldTransform(transform); //g3d->TransferItkToVtkTransform(); // update VTK Transform for rendering too //included in SetIndexToWorldTransform g3d->Modified(); return g3d; } diff --git a/Modules/IGT/DataManagement/mitkNavigationTool.cpp b/Modules/IGT/DataManagement/mitkNavigationTool.cpp index 0ef596e00b..870332827a 100644 --- a/Modules/IGT/DataManagement/mitkNavigationTool.cpp +++ b/Modules/IGT/DataManagement/mitkNavigationTool.cpp @@ -1,354 +1,362 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "mitkNavigationTool.h" #include "mitkIGTException.h" #include "mitkNavigationData.h" #include "Poco/File.h" #include "mitkUnspecifiedTrackingTypeInformation.h" #include "vtkSphereSource.h" #include "vtkConeSource.h" #include "vtkLineSource.h" #include "vtkCylinderSource.h" #include "vtkTransformPolyDataFilter.h" #include #include "mitkTextAnnotation3D.h" #include "mitkManualPlacementAnnotationRenderer.h" #include "mitkBaseRenderer.h" mitk::NavigationTool::NavigationTool() : m_Identifier("None"), m_Type(mitk::NavigationTool::Unknown), m_CalibrationFile("none"), m_SerialNumber(""), m_TrackingDeviceType(mitk::UnspecifiedTrackingTypeInformation::GetTrackingDeviceName()), m_ToolLandmarks(mitk::PointSet::New()), m_ToolControlPoints(mitk::PointSet::New()), m_ToolAxisOrientation(mitk::Quaternion(0, 0, 0, 1)) { m_ToolTipPosition[0] = 0; m_ToolTipPosition[1] = 0; m_ToolTipPosition[2] = 0; SetDefaultSurface(); } itk::LightObject::Pointer mitk::NavigationTool::InternalClone() const { Self::Pointer tool = new Self(*this); tool->UnRegister(); return tool.GetPointer(); } mitk::NavigationTool::NavigationTool(const NavigationTool &other) : Superclass() { this->m_Identifier = other.m_Identifier; this->m_Type = other.m_Type; if (other.m_DataNode.IsNotNull()) { this->m_DataNode = other.m_DataNode->Clone(); this->m_DataNode->SetName(other.m_DataNode->GetName()); if (other.m_DataNode->GetData()) { this->m_DataNode->SetData(dynamic_cast(other.m_DataNode->GetData()->Clone().GetPointer())); } } if (other.m_SpatialObject.IsNotNull()) this->m_SpatialObject = other.m_SpatialObject->Clone(); this->m_CalibrationFile = other.m_CalibrationFile; this->m_SerialNumber = other.m_SerialNumber; this->m_TrackingDeviceType = other.m_TrackingDeviceType; if (other.m_ToolLandmarks.IsNotNull()) this->m_ToolLandmarks = other.m_ToolLandmarks->Clone(); if (other.m_ToolControlPoints.IsNotNull()) this->m_ToolControlPoints = other.m_ToolControlPoints->Clone(); this->m_ToolTipPosition = other.m_ToolTipPosition; this->m_ToolAxisOrientation = other.m_ToolAxisOrientation; } mitk::NavigationTool::~NavigationTool() { } mitk::Point3D mitk::NavigationTool::GetToolAxis() { // The tool axis in the sensor coordinate system is defined as the negative z-axis mitk::Vector3D toolAxisSensorCoordinateSystem; mitk::FillVector3D(toolAxisSensorCoordinateSystem, 0.0, 0.0, -1.0); // Apply inverse tool axis transform to calculate tool axis vnl_vector_fixed toolAxisVector = m_ToolAxisOrientation.inverse().rotate(toolAxisSensorCoordinateSystem.GetVnlVector()); // Transfer to mitk::Point3D mitk::Point3D toolAxis; toolAxis[0] = toolAxisVector[0]; toolAxis[1] = toolAxisVector[1]; toolAxis[2] = toolAxisVector[2]; return toolAxis; } void mitk::NavigationTool::SetToolAxis(mitk::Point3D toolAxis) { // The tool axis in the sensor coordinate system is defined as the negative z-axis mitk::Vector3D toolAxisSensorCoordinateSystem; mitk::FillVector3D(toolAxisSensorCoordinateSystem, 0.0, 0.0, -1.0); // Normalize the tool axis as obtained by a tool axis calibration mitk::Vector3D toolAxisFromCalibration; mitk::FillVector3D(toolAxisFromCalibration, toolAxis[0], toolAxis[1], toolAxis[2]); toolAxisFromCalibration.Normalize(); - // Determine rotation angle - mitk::ScalarType rotationAngle = acos(toolAxisSensorCoordinateSystem*toolAxisFromCalibration); - // Determine rotation axis - mitk::Vector3D rotationAxis = itk::CrossProduct(toolAxisSensorCoordinateSystem, toolAxisFromCalibration); - // Calculate transform - itk::AffineTransform::Pointer sensorToToolAxisOrientation = itk::AffineTransform::New(); - sensorToToolAxisOrientation->Rotate3D(rotationAxis, rotationAngle); - // transfer to quaternion notation. Note that the vnl_quaternion expects the matrix in row major format, hence the transpose - mitk::Quaternion toolAxisTransform(sensorToToolAxisOrientation->GetMatrix().GetVnlMatrix().transpose()); - // Update the tool tip orientation - m_ToolAxisOrientation = toolAxisTransform; + // if tool axis to be set is different to the default tool axis (0,0,-1) calculate the tool axis orientation, otherwise set it to identity + if (toolAxisSensorCoordinateSystem == toolAxisFromCalibration) + { + m_ToolAxisOrientation = mitk::Quaternion(0,0,0,1); + } + else + { + // Determine rotation angle + mitk::ScalarType rotationAngle = acos(toolAxisSensorCoordinateSystem*toolAxisFromCalibration); + // Determine rotation axis + mitk::Vector3D rotationAxis = itk::CrossProduct(toolAxisSensorCoordinateSystem, toolAxisFromCalibration); + // Calculate transform + itk::AffineTransform::Pointer sensorToToolAxisOrientation = itk::AffineTransform::New(); + sensorToToolAxisOrientation->Rotate3D(rotationAxis, rotationAngle); + // transfer to quaternion notation. Note that the vnl_quaternion expects the matrix in row major format, hence the transpose + mitk::Quaternion toolAxisTransform(sensorToToolAxisOrientation->GetMatrix().GetVnlMatrix().transpose()); + // Update the tool axis orientation + m_ToolAxisOrientation = toolAxisTransform; + } } mitk::AffineTransform3D::Pointer mitk::NavigationTool::GetToolTipTransform() { mitk::NavigationData::Pointer returnValue = mitk::NavigationData::New(); returnValue->SetPosition(this->m_ToolTipPosition); returnValue->SetOrientation(this->m_ToolAxisOrientation); return returnValue->GetAffineTransform3D(); } void mitk::NavigationTool::Graft(const DataObject *data) { // Attempt to cast data to an NavigationData const Self* nd; try { nd = dynamic_cast(data); } catch (...) { mitkThrowException(mitk::IGTException) << "mitk::NavigationData::Graft cannot cast " << typeid(data).name() << " to " << typeid(const Self *).name(); } if (!nd) { // pointer could not be cast back down mitkThrowException(mitk::IGTException) << "mitk::NavigationData::Graft cannot cast " << typeid(data).name() << " to " << typeid(const Self *).name(); } // Now copy anything that is needed m_Identifier = nd->GetIdentifier(); m_Type = nd->GetType(); m_DataNode->SetName(nd->GetDataNode()->GetName()); m_DataNode->SetData(nd->GetDataNode()->GetData()); m_SpatialObject = nd->GetSpatialObject(); m_CalibrationFile = nd->GetCalibrationFile(); m_SerialNumber = nd->GetSerialNumber(); m_TrackingDeviceType = nd->GetTrackingDeviceType(); m_ToolLandmarks = nd->GetToolLandmarks(); m_ToolControlPoints = nd->GetToolControlPoints(); m_ToolTipPosition = nd->GetToolTipPosition(); m_ToolAxisOrientation = nd->GetToolAxisOrientation(); } bool mitk::NavigationTool::IsToolTipSet() { if ((m_ToolTipPosition[0] == 0) && (m_ToolTipPosition[1] == 0) && (m_ToolTipPosition[2] == 0) && (m_ToolAxisOrientation.x() == 0) && (m_ToolAxisOrientation.y() == 0) && (m_ToolAxisOrientation.z() == 0) && (m_ToolAxisOrientation.r() == 1)) return false; else return true; } void mitk::NavigationTool::SetCalibrationFile(const std::string filename) { //check if file does exist: if (filename == "") { m_CalibrationFile = "none"; } else { Poco::File myFile(filename); if (myFile.exists()) m_CalibrationFile = filename; else m_CalibrationFile = "none"; } } std::string mitk::NavigationTool::GetToolName() { if (this->m_DataNode.IsNull()) { return ""; } else { return m_DataNode->GetName(); } } mitk::Surface::Pointer mitk::NavigationTool::GetToolSurface() { if (this->m_DataNode.IsNull()) { return nullptr; } else if (this->m_DataNode->GetData() == nullptr) { return nullptr; } else { return dynamic_cast(m_DataNode->GetData()); } } void mitk::NavigationTool::SetDefaultSurface() { if (m_DataNode.IsNull()) m_DataNode = mitk::DataNode::New(); mitk::Surface::Pointer mySphere = mitk::Surface::New(); double axisLength = 5.; vtkSmartPointer vtkSphere = vtkSmartPointer::New(); vtkSmartPointer vtkCone = vtkSmartPointer::New(); vtkSmartPointer vtkCylinder = vtkSmartPointer::New(); vtkSmartPointer axis = vtkSmartPointer::New(); vtkSmartPointer vtkLine = vtkSmartPointer::New(); vtkSmartPointer vtkLine2 = vtkSmartPointer::New(); vtkSmartPointer vtkLine3 = vtkSmartPointer::New(); vtkSmartPointer appendPolyData = vtkSmartPointer::New(); vtkSmartPointer surface = vtkSmartPointer::New(); //Y-Axis (start with y, cause cylinder is oriented in y by vtk default...) vtkCone->SetDirection(0, 1, 0); vtkCone->SetHeight(1.0); vtkCone->SetRadius(0.4f); vtkCone->SetResolution(16); vtkCone->SetCenter(0.0, axisLength, 0.0); vtkCone->Update(); vtkCylinder->SetRadius(0.05); vtkCylinder->SetHeight(axisLength); vtkCylinder->SetCenter(0.0, 0.5*axisLength, 0.0); vtkCylinder->Update(); appendPolyData->AddInputData(vtkCone->GetOutput()); appendPolyData->AddInputData(vtkCylinder->GetOutput()); appendPolyData->Update(); axis->DeepCopy(appendPolyData->GetOutput()); //y symbol vtkLine->SetPoint1(-0.5, axisLength + 2., 0.0); vtkLine->SetPoint2(0.0, axisLength + 1.5, 0.0); vtkLine->Update(); vtkLine2->SetPoint1(0.5, axisLength + 2., 0.0); vtkLine2->SetPoint2(-0.5, axisLength + 1., 0.0); vtkLine2->Update(); appendPolyData->AddInputData(vtkLine->GetOutput()); appendPolyData->AddInputData(vtkLine2->GetOutput()); appendPolyData->AddInputData(axis); appendPolyData->Update(); surface->DeepCopy(appendPolyData->GetOutput()); //X-axis vtkSmartPointer XTransform = vtkSmartPointer::New(); XTransform->RotateZ(-90); vtkSmartPointer TrafoFilter = vtkSmartPointer::New(); TrafoFilter->SetTransform(XTransform); TrafoFilter->SetInputData(axis); TrafoFilter->Update(); //x symbol vtkLine->SetPoint1(axisLength + 2., -0.5, 0.0); vtkLine->SetPoint2(axisLength + 1., 0.5, 0.0); vtkLine->Update(); vtkLine2->SetPoint1(axisLength + 2., 0.5, 0.0); vtkLine2->SetPoint2(axisLength + 1., -0.5, 0.0); vtkLine2->Update(); appendPolyData->AddInputData(vtkLine->GetOutput()); appendPolyData->AddInputData(vtkLine2->GetOutput()); appendPolyData->AddInputData(TrafoFilter->GetOutput()); appendPolyData->AddInputData(surface); appendPolyData->Update(); surface->DeepCopy(appendPolyData->GetOutput()); //Z-axis vtkSmartPointer ZTransform = vtkSmartPointer::New(); ZTransform->RotateX(90); TrafoFilter->SetTransform(ZTransform); TrafoFilter->SetInputData(axis); TrafoFilter->Update(); //z symbol vtkLine->SetPoint1(-0.5, 0.0, axisLength + 2.); vtkLine->SetPoint2(0.5, 0.0, axisLength + 2.); vtkLine->Update(); vtkLine2->SetPoint1(-0.5, 0.0, axisLength + 2.); vtkLine2->SetPoint2(0.5, 0.0, axisLength + 1.); vtkLine2->Update(); vtkLine3->SetPoint1(0.5, 0.0, axisLength + 1.); vtkLine3->SetPoint2(-0.5, 0.0, axisLength + 1.); vtkLine3->Update(); appendPolyData->AddInputData(vtkLine->GetOutput()); appendPolyData->AddInputData(vtkLine2->GetOutput()); appendPolyData->AddInputData(vtkLine3->GetOutput()); appendPolyData->AddInputData(TrafoFilter->GetOutput()); appendPolyData->AddInputData(surface); appendPolyData->Update(); surface->DeepCopy(appendPolyData->GetOutput()); //Center vtkSphere->SetRadius(0.5f); vtkSphere->SetCenter(0.0, 0.0, 0.0); vtkSphere->Update(); appendPolyData->AddInputData(vtkSphere->GetOutput()); appendPolyData->AddInputData(surface); appendPolyData->Update(); surface->DeepCopy(appendPolyData->GetOutput()); //Scale vtkSmartPointer ScaleTransform = vtkSmartPointer::New(); ScaleTransform->Scale(20., 20., 20.); TrafoFilter->SetTransform(ScaleTransform); TrafoFilter->SetInputData(surface); TrafoFilter->Update(); mySphere->SetVtkPolyData(TrafoFilter->GetOutput()); this->GetDataNode()->SetData(mySphere); } std::string mitk::NavigationTool::GetStringWithAllToolInformation() const { std::stringstream _info; _info << " Identifier: " << this->m_Identifier << "\n" << " NavigationToolType: " << m_Type << "\n" << " Calibration file: " << m_CalibrationFile << "\n" << " Serial number: " << m_SerialNumber << "\n" << " TrackingDeviceType: " << m_TrackingDeviceType << "\n" << " ToolTip Position: " << m_ToolTipPosition << "\n" << " Tool Axis Orientation: " << m_ToolAxisOrientation << "\n" << " Tool Axis: " << m_ToolAxisOrientation.inverse().rotate(vnl_vector_fixed(0.0,0.0,-1.0)) ; return _info.str(); } diff --git a/Modules/US/USModel/mitkUSDevice.cpp b/Modules/US/USModel/mitkUSDevice.cpp index 006a9ac0a4..029fdada96 100644 --- a/Modules/US/USModel/mitkUSDevice.cpp +++ b/Modules/US/USModel/mitkUSDevice.cpp @@ -1,670 +1,670 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "mitkUSDevice.h" #include "mitkImageReadAccessor.h" // US Control Interfaces #include "mitkUSControlInterfaceProbes.h" #include "mitkUSControlInterfaceBMode.h" #include "mitkUSControlInterfaceDoppler.h" // Microservices #include #include #include #include mitk::USDevice::PropertyKeys mitk::USDevice::GetPropertyKeys() { static mitk::USDevice::PropertyKeys propertyKeys; return propertyKeys; } mitk::USDevice::USImageCropArea mitk::USDevice::GetCropArea() { MITK_INFO << "Return Crop Area L:" << m_CropArea.cropLeft << " R:" << m_CropArea.cropRight << " T:" << m_CropArea.cropTop << " B:" << m_CropArea.cropBottom; return m_CropArea; } mitk::USDevice::USDevice(std::string manufacturer, std::string model) : mitk::ImageSource(), m_IsFreezed(false), m_DeviceState(State_NoState), m_NumberOfOutputs(1), m_Manufacturer(manufacturer), m_Name(model), m_SpawnAcquireThread(true), m_MultiThreader(itk::MultiThreader::New()), m_ImageMutex(itk::FastMutexLock::New()), m_ThreadID(-1), m_UnregisteringStarted(false) { USImageCropArea empty; empty.cropBottom = 0; empty.cropTop = 0; empty.cropLeft = 0; empty.cropRight = 0; this->m_CropArea = empty; // set number of outputs this->SetNumberOfIndexedOutputs(m_NumberOfOutputs); // create a new output mitk::Image::Pointer newOutput = mitk::Image::New(); this->SetNthOutput(0, newOutput); } mitk::USDevice::USDevice(mitk::USImageMetadata::Pointer metadata) : mitk::ImageSource(), m_IsFreezed(false), m_DeviceState(State_NoState), m_SpawnAcquireThread(true), m_MultiThreader(itk::MultiThreader::New()), m_ImageMutex(itk::FastMutexLock::New()), m_ThreadID(-1), m_UnregisteringStarted(false) { m_Manufacturer = metadata->GetDeviceManufacturer(); m_Name = metadata->GetDeviceModel(); m_Comment = metadata->GetDeviceComment(); USImageCropArea empty; empty.cropBottom = 0; empty.cropTop = 0; empty.cropLeft = 0; empty.cropRight = 0; this->m_CropArea = empty; // set number of outputs this->SetNumberOfIndexedOutputs(1); // create a new output mitk::Image::Pointer newOutput = mitk::Image::New(); this->SetNthOutput(0, newOutput); } mitk::USDevice::~USDevice() { if (m_ThreadID >= 0) { m_MultiThreader->TerminateThread(m_ThreadID); } // make sure that the us device is not registered at the micro service // anymore after it is destructed this->UnregisterOnService(); } mitk::USAbstractControlInterface::Pointer mitk::USDevice::GetControlInterfaceCustom() { MITK_INFO << "Custom control interface does not exist for this object."; return nullptr; } mitk::USControlInterfaceBMode::Pointer mitk::USDevice::GetControlInterfaceBMode() { MITK_INFO << "Control interface BMode does not exist for this object."; return nullptr; } mitk::USControlInterfaceProbes::Pointer mitk::USDevice::GetControlInterfaceProbes() { MITK_INFO << "Control interface Probes does not exist for this object."; return nullptr; } mitk::USControlInterfaceDoppler::Pointer mitk::USDevice::GetControlInterfaceDoppler() { MITK_INFO << "Control interface Doppler does not exist for this object."; return nullptr; } void mitk::USDevice::SetManufacturer(std::string manufacturer) { m_Manufacturer = manufacturer; if (m_DeviceState >= State_Initialized) { this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_MANUFACTURER, manufacturer); } } void mitk::USDevice::SetName(std::string name) { m_Name = name; if (m_DeviceState >= State_Initialized) { this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_NAME, name); } } void mitk::USDevice::SetComment(std::string comment) { m_Comment = comment; if (m_DeviceState >= State_Initialized) { this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_COMMENT, comment); } } us::ServiceProperties mitk::USDevice::ConstructServiceProperties() { mitk::USDevice::PropertyKeys propertyKeys = mitk::USDevice::GetPropertyKeys(); us::ServiceProperties props; props[propertyKeys.US_PROPKEY_ISCONNECTED] = this->GetIsConnected() ? "true" : "false"; props[propertyKeys.US_PROPKEY_ISACTIVE] = this->GetIsActive() ? "true" : "false"; props[propertyKeys.US_PROPKEY_LABEL] = this->GetServicePropertyLabel(); // get identifier of selected probe if there is one selected mitk::USControlInterfaceProbes::Pointer probesControls = this->GetControlInterfaceProbes(); if (probesControls.IsNotNull() && probesControls->GetIsActive()) { mitk::USProbe::Pointer probe = probesControls->GetSelectedProbe(); if (probe.IsNotNull()) { props[propertyKeys.US_PROPKEY_PROBES_SELECTED] = probe->GetName(); } } props[propertyKeys.US_PROPKEY_CLASS] = GetDeviceClass(); props[propertyKeys.US_PROPKEY_MANUFACTURER] = m_Manufacturer; props[propertyKeys.US_PROPKEY_NAME] = m_Name; props[propertyKeys.US_PROPKEY_COMMENT] = m_Comment; m_ServiceProperties = props; return props; } void mitk::USDevice::UnregisterOnService() { // unregister on micro service if (m_ServiceRegistration && !m_UnregisteringStarted) { // make sure that unregister is not started a second // time due to a callback during unregister for example m_UnregisteringStarted = true; m_ServiceRegistration.Unregister(); m_ServiceRegistration = 0; } } bool mitk::USDevice::Initialize() { if (!this->OnInitialization()) { return false; } m_DeviceState = State_Initialized; // Get Context and Module us::ModuleContext* context = us::GetModuleContext(); us::ServiceProperties props = this->ConstructServiceProperties(); m_ServiceRegistration = context->RegisterService(this, props); return true; } bool mitk::USDevice::Connect() { MITK_DEBUG << "mitk::USDevice::Connect() called"; if (this->GetIsConnected()) { MITK_INFO("mitkUSDevice") << "Tried to connect an ultrasound device that " "was already connected. Ignoring call..."; return true; } if (!this->GetIsInitialized()) { MITK_ERROR("mitkUSDevice") << "Cannot connect device if it is not in initialized state."; return false; } // Prepare connection, fail if this fails. if (!this->OnConnection()) { return false; } // Update state m_DeviceState = State_Connected; this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_ISCONNECTED, true); return true; } void mitk::USDevice::ConnectAsynchron() { this->m_MultiThreader->SpawnThread(this->ConnectThread, this); } bool mitk::USDevice::Disconnect() { if (!GetIsConnected()) { MITK_WARN << "Tried to disconnect an ultrasound device that was not " "connected. Ignoring call..."; return false; } // Prepare connection, fail if this fails. if (!this->OnDisconnection()) return false; // Update state m_DeviceState = State_Initialized; this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_ISCONNECTED, false); return true; } bool mitk::USDevice::Activate() { if (!this->GetIsConnected()) { MITK_INFO("mitkUSDevice") << "Cannot activate device if it is not in connected state."; return true; } if (OnActivation()) { m_DeviceState = State_Activated; m_FreezeBarrier = itk::ConditionVariable::New(); // spawn thread for aquire images if us device is active if (m_SpawnAcquireThread) { this->m_ThreadID = this->m_MultiThreader->SpawnThread(this->Acquire, this); } this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_ISACTIVE, true); this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_LABEL, this->GetServicePropertyLabel()); // initialize the b mode control properties of the micro service mitk::USControlInterfaceBMode::Pointer bmodeControls = this->GetControlInterfaceBMode(); if (bmodeControls.IsNotNull()) { bmodeControls->Initialize(); } } this->ProvideViaOIGTL(); return m_DeviceState == State_Activated; } void mitk::USDevice::ProvideViaOIGTL() { // create a new OpenIGTLink Server if (m_IGTLServer.IsNull()) m_IGTLServer = mitk::IGTLServer::New(true); m_IGTLServer->SetName(this->GetName()); // create a new OpenIGTLink Device source if (m_IGTLMessageProvider.IsNull()) m_IGTLMessageProvider = mitk::IGTLMessageProvider::New(); // set the OpenIGTLink server as the source for the device source m_IGTLMessageProvider->SetIGTLDevice(m_IGTLServer); // register the provider so that it can be configured with the IGTL manager // plugin. This could be hardcoded but now I already have the fancy plugin. m_IGTLMessageProvider->RegisterAsMicroservice(); m_ImageToIGTLMsgFilter = mitk::ImageToIGTLMessageFilter::New(); m_ImageToIGTLMsgFilter->ConnectTo(this); // set the name of this filter to identify it easier m_ImageToIGTLMsgFilter->SetName(this->GetName()); // register this filter as micro service. The message provider looks for // provided IGTLMessageSources, once it found this microservice and someone // requested this data type then the provider will connect with this filter // automatically. m_ImageToIGTLMsgFilter->RegisterAsMicroservice(); } void mitk::USDevice::Deactivate() { if (!this->GetIsActive()) { MITK_WARN("mitkUSDevice") - << "Cannot deactivate a device which is not activae."; + << "Cannot deactivate a device which is not active."; return; } if (!OnDeactivation()) { return; } DisableOIGTL(); m_DeviceState = State_Connected; this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_ISACTIVE, false); this->UpdateServiceProperty( mitk::USDevice::GetPropertyKeys().US_PROPKEY_LABEL, this->GetServicePropertyLabel()); } void mitk::USDevice::DisableOIGTL() { // TODO: This seems not to be enough cleanup to catch all cases. For example, if the device is disconnected // from the OIGTL GUI, this won't get cleaned up correctly. m_IGTLServer->CloseConnection(); m_IGTLMessageProvider->UnRegisterMicroservice(); m_ImageToIGTLMsgFilter->UnRegisterMicroservice(); } void mitk::USDevice::SetIsFreezed(bool freeze) { if (!this->GetIsActive()) { MITK_WARN("mitkUSDevice") << "Cannot freeze or unfreeze if device is not active."; return; } this->OnFreeze(freeze); if (freeze) { m_IsFreezed = true; } else { m_IsFreezed = false; // wake up the image acquisition thread m_FreezeBarrier->Signal(); } } bool mitk::USDevice::GetIsFreezed() { if (!this->GetIsActive()) { MITK_WARN("mitkUSDevice")("mitkUSTelemedDevice") << "Cannot get freeze state if the hardware interface is not ready. " "Returning false..."; return false; } return m_IsFreezed; } void mitk::USDevice::PushFilter(AbstractOpenCVImageFilter::Pointer filter) { mitk::USImageSource::Pointer imageSource = this->GetUSImageSource(); if (imageSource.IsNull()) { MITK_ERROR << "ImageSource must not be null when pushing a filter."; mitkThrow() << "ImageSource must not be null when pushing a filter."; } imageSource->PushFilter(filter); } void mitk::USDevice::PushFilterIfNotPushedBefore( AbstractOpenCVImageFilter::Pointer filter) { mitk::USImageSource::Pointer imageSource = this->GetUSImageSource(); if (imageSource.IsNull()) { MITK_ERROR << "ImageSource must not be null when pushing a filter."; mitkThrow() << "ImageSource must not be null when pushing a filter."; } if (!imageSource->GetIsFilterInThePipeline(filter)) { imageSource->PushFilter(filter); } } bool mitk::USDevice::RemoveFilter(AbstractOpenCVImageFilter::Pointer filter) { mitk::USImageSource::Pointer imageSource = this->GetUSImageSource(); if (imageSource.IsNull()) { MITK_ERROR << "ImageSource must not be null when pushing a filter."; mitkThrow() << "ImageSource must not be null when removing a filter."; } return imageSource->RemoveFilter(filter); } void mitk::USDevice::UpdateServiceProperty(std::string key, std::string value) { m_ServiceProperties[key] = value; m_ServiceRegistration.SetProperties(m_ServiceProperties); // send event to notify listeners about the changed property m_PropertyChangedMessage(key, value); } void mitk::USDevice::UpdateServiceProperty(std::string key, double value) { std::stringstream stream; stream << value; this->UpdateServiceProperty(key, stream.str()); } void mitk::USDevice::UpdateServiceProperty(std::string key, bool value) { this->UpdateServiceProperty( key, value ? std::string("true") : std::string("false")); } /** mitk::Image* mitk::USDevice::GetOutput() { if (this->GetNumberOfOutputs() < 1) return nullptr; return static_cast(this->ProcessObject::GetPrimaryOutput()); } mitk::Image* mitk::USDevice::GetOutput(unsigned int idx) { if (this->GetNumberOfOutputs() < 1) return nullptr; return static_cast(this->ProcessObject::GetOutput(idx)); } void mitk::USDevice::GraftOutput(itk::DataObject *graft) { this->GraftNthOutput(0, graft); } void mitk::USDevice::GraftNthOutput(unsigned int idx, itk::DataObject *graft) { if ( idx >= this->GetNumberOfOutputs() ) { itkExceptionMacro(<<"Requested to graft output " << idx << " but this filter only has " << this->GetNumberOfOutputs() << " Outputs."); } if ( !graft ) { itkExceptionMacro(<<"Requested to graft output with a nullptr pointer object" ); } itk::DataObject* output = this->GetOutput(idx); if ( !output ) { itkExceptionMacro(<<"Requested to graft output that is a nullptr pointer" ); } // Call Graft on USImage to copy member data output->Graft( graft ); } */ void mitk::USDevice::GrabImage() { std::vector image = this->GetUSImageSource()->GetNextImage(); m_ImageMutex->Lock(); this->SetImageVector(image); m_ImageMutex->Unlock(); } //########### GETTER & SETTER ##################// bool mitk::USDevice::GetIsInitialized() { return m_DeviceState == State_Initialized; } bool mitk::USDevice::GetIsActive() { return m_DeviceState == State_Activated; } bool mitk::USDevice::GetIsConnected() { return m_DeviceState == State_Connected; } std::string mitk::USDevice::GetDeviceManufacturer() { return m_Manufacturer; } std::string mitk::USDevice::GetDeviceModel() { return m_Name; } std::string mitk::USDevice::GetDeviceComment() { return m_Comment; } void mitk::USDevice::GenerateData() { m_ImageMutex->Lock(); for (unsigned int i = 0; i < m_ImageVector.size() && i < this->GetNumberOfIndexedOutputs(); ++i) { auto& image = m_ImageVector[i]; if (image.IsNull() || !image->IsInitialized()) { // skip image } else { mitk::Image::Pointer output = this->GetOutput(i); if (!output->IsInitialized() || output->GetDimension(0) != image->GetDimension(0) || output->GetDimension(1) != image->GetDimension(1) || output->GetDimension(2) != image->GetDimension(2) || output->GetPixelType() != image->GetPixelType()) { output->Initialize(image->GetPixelType(), image->GetDimension(), image->GetDimensions()); } // copy contents of the given image into the member variable mitk::ImageReadAccessor inputReadAccessor(image); output->SetImportVolume(inputReadAccessor.GetData()); output->SetGeometry(image->GetGeometry()); } } m_ImageMutex->Unlock(); }; std::string mitk::USDevice::GetServicePropertyLabel() { std::string isActive; if (this->GetIsActive()) { isActive = " (Active)"; } else { isActive = " (Inactive)"; } // e.g.: Zonare MyLab5 (Active) return m_Manufacturer + " " + m_Name + isActive; } ITK_THREAD_RETURN_TYPE mitk::USDevice::Acquire(void* pInfoStruct) { /* extract this pointer from Thread Info structure */ struct itk::MultiThreader::ThreadInfoStruct* pInfo = (struct itk::MultiThreader::ThreadInfoStruct*)pInfoStruct; mitk::USDevice* device = (mitk::USDevice*)pInfo->UserData; while (device->GetIsActive()) { // lock this thread when ultrasound device is freezed if (device->m_IsFreezed) { itk::SimpleMutexLock* mutex = &(device->m_FreezeMutex); mutex->Lock(); if (device->m_FreezeBarrier.IsNotNull()) { device->m_FreezeBarrier->Wait(mutex); } } device->GrabImage(); } return ITK_THREAD_RETURN_VALUE; } ITK_THREAD_RETURN_TYPE mitk::USDevice::ConnectThread(void* pInfoStruct) { /* extract this pointer from Thread Info structure */ struct itk::MultiThreader::ThreadInfoStruct* pInfo = (struct itk::MultiThreader::ThreadInfoStruct*)pInfoStruct; mitk::USDevice* device = (mitk::USDevice*)pInfo->UserData; device->Connect(); return ITK_THREAD_RETURN_VALUE; } void mitk::USDevice::ProbeChanged(std::string probename) { this->UpdateServiceProperty(mitk::USDevice::GetPropertyKeys().US_PROPKEY_PROBES_SELECTED, probename); } void mitk::USDevice::DepthChanged(double depth) { this->UpdateServiceProperty(mitk::USDevice::GetPropertyKeys().US_PROPKEY_BMODE_DEPTH, depth); } diff --git a/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.cpp b/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.cpp index d612d9f873..5b0214cfc1 100644 --- a/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.cpp +++ b/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.cpp @@ -1,132 +1,75 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "QmitkUSAbstractCustomWidget.h" -#include -#include - std::string QmitkUSAbstractCustomWidget::US_DEVICE_PROPKEY_CLASS() { static std::string s = "org.mitk.services.UltrasoundCustomWidget.deviceClass"; return s; } QmitkUSAbstractCustomWidget::QmitkUSAbstractCustomWidget(QWidget* parent) - : QWidget(parent), m_PrototypeServiceFactory(nullptr), m_IsClonedForQt(false) + : QWidget(parent), m_IsClonedForQt(false) { - } QmitkUSAbstractCustomWidget::~QmitkUSAbstractCustomWidget() { - this->UnregisterService(); - delete m_PrototypeServiceFactory; } void QmitkUSAbstractCustomWidget::SetDevice(mitk::USDevice::Pointer device) { m_Device = device; if ( device ) { this->OnDeviceSet(); } } mitk::USDevice::Pointer QmitkUSAbstractCustomWidget::GetDevice() const { return m_Device; } QmitkUSAbstractCustomWidget* QmitkUSAbstractCustomWidget::CloneForQt(QWidget* parent) const { QmitkUSAbstractCustomWidget* clonedWidget = this->Clone(parent); clonedWidget->Initialize(); // initialize the Qt stuff of the widget clonedWidget->m_IsClonedForQt = true; // set flag that this object was really cloned return clonedWidget; } -//////////// µS Registration & Properties ////////////// - -us::ServiceRegistration QmitkUSAbstractCustomWidget::RegisterService(us::ModuleContext *context) -{ - if (m_PrototypeServiceFactory) - return us::ServiceRegistration(); - - if (context == nullptr) - { - context = us::GetModuleContext(); - } - - // Define a PrototypeServiceFactory for the abstract super class of all custom control widgets of USUI - // This factory is used to register the individual widgets as micro services linked to specific US devices - struct PrototypeFactory : public us::PrototypeServiceFactory - { - QmitkUSAbstractCustomWidget *const m_Prototype; - - PrototypeFactory(QmitkUSAbstractCustomWidget *prototype) : m_Prototype(prototype) {} - us::InterfaceMap GetService(us::Module * /*module*/, - const us::ServiceRegistrationBase & /*registration*/) override - { - return us::MakeInterfaceMap(m_Prototype->Clone()); - } - - void UngetService(us::Module * /*module*/, - const us::ServiceRegistrationBase & /*registration*/, - const us::InterfaceMap &service) override - { - delete us::ExtractInterface(service); - } - }; - - m_PrototypeServiceFactory = new PrototypeFactory(this); // instantiate PrototypeFactory with QmitkUSAbstractCustomWidget as prototype - us::ServiceProperties props = this->GetServiceProperties(); // retrieve the service properties (the device class linked with each custom control widget) - m_Reg = context->RegisterService(m_PrototypeServiceFactory, props); // register service - return m_Reg; -} - -void QmitkUSAbstractCustomWidget::UnregisterService() -{ - try - { - m_Reg.Unregister(); - } - catch (const std::exception &e) - { - MITK_ERROR << e.what(); - } -} - us::ServiceProperties QmitkUSAbstractCustomWidget::GetServiceProperties() const { us::ServiceProperties result; result[QmitkUSAbstractCustomWidget::US_DEVICE_PROPKEY_CLASS()] = this->GetDeviceClass(); return result; } void QmitkUSAbstractCustomWidget::showEvent ( QShowEvent * event ) { // using object from micro service directly in Qt without cloning it first // can cause problems when Qt deletes this object -> throw an exception to // show that object should be cloned before if ( ! m_IsClonedForQt ) { MITK_ERROR << "Object wasn't cloned with CloneForQt() before using as QWidget."; mitkThrow() << "Object wasn't cloned with CloneForQt() before using as QWidget."; } QWidget::showEvent(event); } diff --git a/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.h b/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.h index f7c73f553b..f9380c431e 100644 --- a/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.h +++ b/Modules/USUI/Qmitk/QmitkUSAbstractCustomWidget.h @@ -1,165 +1,147 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef QmitkUSAbstractCustomWidget_h #define QmitkUSAbstractCustomWidget_h #include #include #include "mitkUSDevice.h" // Microservices #include -#include -#include - -#include -#include - -namespace us { - struct PrototypeServiceFactory; - class ModuleContext; -} /** * \brief Abstract superclass for all custom control widgets of mitk::USDevice classes. * * The custom control widgets are made available using a us::PrototypeServiceFactory. This means that each * concrete subclass should be registered in the microservice by calling * QmitkUSAbstractCustomWidget::RegisterService() on an object. The best place for doing this would be in * the corresponding module or plugin activator. * * Afterwards a copy of the registered object can be obtained from the microservice as shown in the example * below. Do not forget to call QmitkUSAbstractCustomWidget::CloneForQt() on the object received from the * microservice. This is necessary to allow deleting the object as it is necessary in Qt for removing it from * a layout. * * * Subclasses must implement three methods: * - QmitkUSAbstractCustomWidget::OnDeviceSet() -> should handle initialization when mitk:USDevice was set * - QmitkUSAbstractCustomWidget::GetDeviceClass() -> must return device class of corresponding mitk::USDevice * - QmitkUSAbstractCustomWidget::Clone() -> must create a copy of the current object * * * The code to use a custom control widget in a plugin can look like this: * * \code * ctkPluginContext* pluginContext = // get the plugig context * mitk::USDevice device = // get the ultrasound device * * // get service references for ultrasound device * std::string filter = "(org.mitk.services.UltrasoundCustomWidget.deviceClass=" + device->GetDeviceClass() + ")"; * QString interfaceName ( us_service_interface_iid() ); * QList serviceRefs = pluginContext->getServiceReferences(interfaceName, QString::fromStdString(filter)); * * if (serviceRefs.size() > 0) * { * // get widget from the service and make sure that it is cloned, so that * // it can be deleted if it should be removed from the GUI later * QmitkUSAbstractCustomWidget* widget = pluginContext->getService * (serviceRefs.at(0))->CloneForQt(parentWidget); * // now the widget can be used like any other QWidget * } * \endcode */ class MITKUSUI_EXPORT QmitkUSAbstractCustomWidget : public QWidget { Q_OBJECT public: QmitkUSAbstractCustomWidget(QWidget* parent = nullptr); ~QmitkUSAbstractCustomWidget() override; void SetDevice(mitk::USDevice::Pointer device); mitk::USDevice::Pointer GetDevice() const; /** * \brief Called every time a mitk::USDevice was set with QmitkUSAbstractCustomWidget::SetDevice(). * A sublcass can implement this function to handle initialiation actions * necessary when a device was set. */ virtual void OnDeviceSet() = 0; /** * \brief Subclass must implement this method to return device class of corresponding mitk::USDevice. * * \return same value as mitk::USDevice::GetDeviceClass() of the corresponding mitk::USDevice */ virtual std::string GetDeviceClass() const = 0; /** * \brief Subclass must implement this method to return a pointer to a copy of the object. */ virtual QmitkUSAbstractCustomWidget* Clone(QWidget* parent = nullptr) const = 0; /** * \brief Method for initializing the Qt stuff of the widget (setupUI, connect). * This method will be called in CloneForQt() and has to be implemented by concrete * subclasses. * \warning All Qt initialization stuff belongs into this method rather than in the constructor. */ virtual void Initialize() = 0; /** * \brief Return pointer to copy of the object. * Internally use of QmitkUSAbstractCustomWidget::Clone() with additionaly * setting an internal flag that the object was really cloned. */ QmitkUSAbstractCustomWidget* CloneForQt(QWidget* parent = nullptr) const; - /** - * \brief Register this widget as microservice using the us::PrototypeServiceFactory. The registered microservice is linked to the US device - */ - us::ServiceRegistration RegisterService(us::ModuleContext * context = us::GetModuleContext()); - void UnregisterService(); - /** * \brief Returns the properties of the micro service. * Properties consist of just the device class of the corresponding * mitk::USDevice. */ us::ServiceProperties GetServiceProperties() const; /** * \brief Overwritten Qt even method. * It is checked if the object was cloned with * QmitkUSAbstractCustomWidget::CloneForQt() before. An exception is thrown * if not. This is done, because using the object from micro service directly * in Qt without cloning it first can cause problems after Qt deleted the * object. * * \throws mitk::Exception */ void showEvent ( QShowEvent * event ) override; /** * \brief Property key for the class name of corresponding us device object. */ static std::string US_DEVICE_PROPKEY_CLASS(); private: mitk::USDevice::Pointer m_Device; ///< USDevice related to the specific widgets - us::PrototypeServiceFactory* m_PrototypeServiceFactory; ///< PrototypeServiceFactory used to register the individual widgets as micro services linked to specific US devices - us::ServiceRegistration m_Reg; ///< ServiceRegistration object used to update the service properties or to unregister the service bool m_IsClonedForQt; }; // This is the microservice declaration. Do not meddle! MITK_DECLARE_SERVICE_INTERFACE(QmitkUSAbstractCustomWidget, "org.mitk.QmitkUSAbstractCustomWidget") #endif // QmitkUSAbstractCustomWidget_h diff --git a/Modules/USUI/Qmitk/QmitkUSControlsCustomDiPhASDeviceWidget.cpp b/Modules/USUI/Qmitk/QmitkUSControlsCustomDiPhASDeviceWidget.cpp index 7974107ed7..71b04c33ad 100644 --- a/Modules/USUI/Qmitk/QmitkUSControlsCustomDiPhASDeviceWidget.cpp +++ b/Modules/USUI/Qmitk/QmitkUSControlsCustomDiPhASDeviceWidget.cpp @@ -1,420 +1,419 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "QmitkUSControlsCustomDiPhASDeviceWidget.h" #include "ui_QmitkUSControlsCustomDiPhASDeviceWidget.h" #include #include QmitkUSControlsCustomDiPhASDeviceWidget::QmitkUSControlsCustomDiPhASDeviceWidget() : ui(new Ui::QmitkUSControlsCustomDiPhASDeviceWidget) { - this->RegisterService(); } QmitkUSControlsCustomDiPhASDeviceWidget::QmitkUSControlsCustomDiPhASDeviceWidget(QWidget *parent) : QmitkUSAbstractCustomWidget(parent), ui(new Ui::QmitkUSControlsCustomDiPhASDeviceWidget) { } QmitkUSControlsCustomDiPhASDeviceWidget::~QmitkUSControlsCustomDiPhASDeviceWidget() { delete ui; } std::string QmitkUSControlsCustomDiPhASDeviceWidget::GetDeviceClass() const { return "org.mitk.modules.us.USDiPhASDevice"; } QmitkUSAbstractCustomWidget* QmitkUSControlsCustomDiPhASDeviceWidget::Clone(QWidget* parent) const { QmitkUSAbstractCustomWidget* clonedWidget = new QmitkUSControlsCustomDiPhASDeviceWidget(parent); clonedWidget->SetDevice(this->GetDevice()); return clonedWidget; } void QmitkUSControlsCustomDiPhASDeviceWidget::OnDeviceSet() { m_ControlInterface = dynamic_cast (this->GetDevice()->GetControlInterfaceCustom().GetPointer()); if ( m_ControlInterface.IsNotNull() ) { m_ControlInterface->passGUIOut([this](QString str)->void{ if (this->ui) { this->ui->CurrentState->setText(str); } }); } else { MITK_WARN("QmitkUSAbstractCustomWidget")("QmitkUSControlsCustomDiPhASDeviceWidget") << "Did not get a custom device control interface."; } //now pass the default values m_OldReconstructionLines = 0; m_ControlInterface->SetSilentUpdate(true); // don't update the scanmode everytime OnTransmitPhaseLengthChanged(); OnExcitationFrequencyChanged(); OnTransmitEventsChanged(); OnVoltageChanged(); OnScanDepthChanged(); // HERE OnAveragingCountChanged(); OnTGCMinChanged(); OnTGCMaxChanged(); OnDataTypeChanged(); OnPitchChanged(); OnReconstructedSamplesChanged(); OnReconstructedLinesChanged(); OnSpeedOfSoundChanged(); OnBandpassEnabledChanged(); OnLowCutChanged(); OnHighCutChanged(); OnUseBModeFilterChanged(); // HERE OnVerticalSpacingChanged(); OnScatteringCoefficientChanged(); OnCompensateScatteringChanged(); OnChangedSavingSettings(); OnCompensateEnergyChanged(); m_ControlInterface->SetSilentUpdate(false); // on the last update pass the scanmode and geometry! OnModeChanged(); // HERE } void QmitkUSControlsCustomDiPhASDeviceWidget::Initialize() { ui->setupUi(this); connect(ui->CompensateEnergy, SIGNAL(stateChanged(int)), this, SLOT(OnCompensateEnergyChanged())); connect(ui->UseBModeFilter, SIGNAL(stateChanged(int)), this, SLOT(OnUseBModeFilterChanged())); connect(ui->StartStopRecord, SIGNAL(clicked()), this, SLOT(OnRecordChanged())); connect(ui->ScatteringCoefficient, SIGNAL(valueChanged(int)), this, SLOT(OnScatteringCoefficientChanged())); connect(ui->CompensateScattering, SIGNAL(stateChanged(int)), this, SLOT(OnCompensateScatteringChanged())); connect(ui->VerticalSpacing, SIGNAL(valueChanged(double)), this, SLOT(OnVerticalSpacingChanged())); connect(ui->SaveBeamformed, SIGNAL(stateChanged(int)), this, SLOT(OnChangedSavingSettings())); connect(ui->SaveRaw, SIGNAL(stateChanged(int)), this, SLOT(OnChangedSavingSettings())); //transmit connect(ui->TransmitPhaseLength, SIGNAL(valueChanged(double)), this, SLOT(OnTransmitPhaseLengthChanged())); connect(ui->ExcitationFrequency, SIGNAL(valueChanged(double)), this, SLOT(OnExcitationFrequencyChanged())); connect(ui->TransmitEvents, SIGNAL(valueChanged(int)), this, SLOT(OnTransmitEventsChanged())); connect(ui->Voltage, SIGNAL(valueChanged(int)), this, SLOT(OnVoltageChanged())); connect(ui->Mode, SIGNAL(currentTextChanged(QString)), this, SLOT(OnModeChanged())); //Receive connect(ui->ScanDepth, SIGNAL(valueChanged(double)), this, SLOT(OnScanDepthChanged())); connect(ui->AveragingCount, SIGNAL(valueChanged(int)), this, SLOT(OnAveragingCountChanged())); connect(ui->TimeGainCompensationMinSlider, SIGNAL(valueChanged(int)), this, SLOT(OnTGCMinChanged())); connect(ui->TimeGainCompensationMaxSlider, SIGNAL(valueChanged(int)), this, SLOT(OnTGCMaxChanged())); connect(ui->DataType, SIGNAL(currentTextChanged(QString)), this, SLOT(OnDataTypeChanged())); //Beamforming connect(ui->PitchOfTransducer, SIGNAL(valueChanged(double)), this, SLOT(OnPitchChanged())); connect(ui->ReconstructedSamplesPerLine, SIGNAL(valueChanged(int)), this, SLOT(OnReconstructedSamplesChanged())); connect(ui->ReconstructedLines, SIGNAL(valueChanged(int)), this, SLOT(OnReconstructedLinesChanged())); connect(ui->SpeedOfSound, SIGNAL(valueChanged(int)), this, SLOT(OnSpeedOfSoundChanged())); //Bandpass connect(ui->BandpassEnabled, SIGNAL(currentTextChanged(QString)), this, SLOT(OnBandpassEnabledChanged())); connect(ui->LowCut, SIGNAL(valueChanged(double)), this, SLOT(OnLowCutChanged())); connect(ui->HighCut, SIGNAL(valueChanged(double)), this, SLOT(OnHighCutChanged())); } //slots void QmitkUSControlsCustomDiPhASDeviceWidget::OnCompensateEnergyChanged() { if (m_ControlInterface.IsNull()) { return; } bool CompensateEnergy = ui->CompensateEnergy->isChecked(); m_ControlInterface->SetCompensateEnergy(CompensateEnergy); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnUseBModeFilterChanged() { if (m_ControlInterface.IsNull()) { return; } bool UseBModeFilter = ui->UseBModeFilter->isChecked(); m_ControlInterface->SetUseBModeFilter(UseBModeFilter); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnRecordChanged() { if (m_ControlInterface.IsNull()) { return; } if (ui->StartStopRecord->text() == "Start Recording") { ui->StartStopRecord->setText("Stop Recording"); ui->UseBModeFilter->setEnabled(false); ui->ScatteringCoefficient->setEnabled(false); ui->CompensateScattering->setEnabled(false); ui->VerticalSpacing->setEnabled(false); ui->SaveBeamformed->setEnabled(false); ui->SaveRaw->setEnabled(false); ui->TransmitPhaseLength->setEnabled(false); ui->ExcitationFrequency->setEnabled(false); ui->TransmitEvents->setEnabled(false); ui->Voltage->setEnabled(false); ui->Mode->setEnabled(false); ui->ScanDepth->setEnabled(false); ui->AveragingCount->setEnabled(false); ui->TimeGainCompensationMinSlider->setEnabled(false); ui->TimeGainCompensationMaxSlider->setEnabled(false); ui->DataType->setEnabled(false); ui->PitchOfTransducer->setEnabled(false); ui->ReconstructedSamplesPerLine->setEnabled(false); ui->ReconstructedLines->setEnabled(false); ui->SpeedOfSound->setEnabled(false); ui->BandpassEnabled->setEnabled(false); ui->LowCut->setEnabled(false); ui->HighCut->setEnabled(false); ui->CompensateEnergy->setEnabled(false); m_ControlInterface->SetRecord(true); } else { ui->StartStopRecord->setText("Start Recording"); ui->UseBModeFilter->setEnabled(true); ui->CompensateScattering->setEnabled(true); if(ui->CompensateScattering->isChecked()) ui->ScatteringCoefficient->setEnabled(true); ui->VerticalSpacing->setEnabled(true); ui->SaveBeamformed->setEnabled(true); ui->SaveRaw->setEnabled(true); ui->TransmitPhaseLength->setEnabled(true); ui->ExcitationFrequency->setEnabled(true); ui->TransmitEvents->setEnabled(true); ui->Voltage->setEnabled(true); ui->Mode->setEnabled(true); ui->ScanDepth->setEnabled(true); ui->AveragingCount->setEnabled(true); ui->TimeGainCompensationMinSlider->setEnabled(true); ui->TimeGainCompensationMaxSlider->setEnabled(true); ui->DataType->setEnabled(true); ui->PitchOfTransducer->setEnabled(true); ui->ReconstructedSamplesPerLine->setEnabled(true); ui->ReconstructedLines->setEnabled(true); ui->SpeedOfSound->setEnabled(true); ui->BandpassEnabled->setEnabled(true); ui->LowCut->setEnabled(true); ui->HighCut->setEnabled(true); ui->CompensateEnergy->setEnabled(true); m_ControlInterface->SetRecord(false); } } void QmitkUSControlsCustomDiPhASDeviceWidget::OnVerticalSpacingChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetVerticalSpacing(ui->VerticalSpacing->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnScatteringCoefficientChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetScatteringCoefficient(ui->ScatteringCoefficient->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnCompensateScatteringChanged() { if (m_ControlInterface.IsNull()) { return; } if (ui->CompensateScattering->isChecked()) ui->ScatteringCoefficient->setEnabled(true); else ui->ScatteringCoefficient->setEnabled(false); m_ControlInterface->SetCompensateScattering(ui->CompensateScattering->isChecked()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnChangedSavingSettings() { if (m_ControlInterface.IsNull()) { return; } mitk::USDiPhASDeviceCustomControls::SavingSettings settings; settings.saveBeamformed = ui->SaveBeamformed->isChecked(); settings.saveRaw = ui->SaveRaw->isChecked(); m_ControlInterface->SetSavingSettings(settings); } //Transmit void QmitkUSControlsCustomDiPhASDeviceWidget::OnTransmitPhaseLengthChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetTransmitPhaseLength(ui->TransmitPhaseLength->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnExcitationFrequencyChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetExcitationFrequency(ui->ExcitationFrequency->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnTransmitEventsChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetTransmitEvents(ui->TransmitEvents->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnVoltageChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetVoltage(ui->Voltage->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnModeChanged() { if (m_ControlInterface.IsNull()) { return; } QString Mode = ui->Mode->currentText(); bool silent = m_ControlInterface->GetSilentUpdate(); m_ControlInterface->SetSilentUpdate(true); if (Mode == "Ultrasound only") { m_ControlInterface->SetMode(false); ui->TransmitEvents->setValue(1); } else if (Mode == "Interleaved") { m_ControlInterface->SetMode(true); ui->TransmitEvents->setValue(1); } if (!silent) { m_ControlInterface->SetSilentUpdate(false); } OnTransmitEventsChanged(); } //Receive void QmitkUSControlsCustomDiPhASDeviceWidget::OnScanDepthChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetScanDepth(ui->ScanDepth->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnAveragingCountChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetAveragingCount(ui->AveragingCount->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnTGCMinChanged() { if (m_ControlInterface.IsNull()) { return; } int tgcMin = ui->TimeGainCompensationMinSlider->value(); int tgcMax = ui->TimeGainCompensationMaxSlider->value(); if (tgcMin > tgcMax) { ui->TimeGainCompensationMinSlider->setValue(tgcMax); MITK_INFO << "User tried to set tgcMin>tgcMax."; } QString text("TGC min = " + QString::fromStdString(std::to_string(ui->TimeGainCompensationMinSlider->value()))); ui->TimeGainCompensationMinLabel->setText(text); m_ControlInterface->SetTGCMin(ui->TimeGainCompensationMinSlider->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnTGCMaxChanged() { if (m_ControlInterface.IsNull()) { return; } int tgcMin = ui->TimeGainCompensationMinSlider->value(); int tgcMax = ui->TimeGainCompensationMaxSlider->value(); if (tgcMin > tgcMax) { ui->TimeGainCompensationMaxSlider->setValue(tgcMin); MITK_INFO << "User tried to set tgcMin>tgcMax."; } QString text("TGC max = "+QString::fromStdString(std::to_string(ui->TimeGainCompensationMaxSlider->value()))); ui->TimeGainCompensationMaxLabel->setText(text); m_ControlInterface->SetTGCMax(ui->TimeGainCompensationMaxSlider->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnDataTypeChanged() { if (m_ControlInterface.IsNull()) { return; } QString DataType = ui->DataType->currentText(); if (DataType == "Image Data") { m_ControlInterface->SetDataType(mitk::USDiPhASDeviceCustomControls::DataType::Image_uChar); } else if (DataType == "Beamformed Data") { m_ControlInterface->SetDataType(mitk::USDiPhASDeviceCustomControls::DataType::Beamformed_Short); } } //Beamforming void QmitkUSControlsCustomDiPhASDeviceWidget::OnPitchChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetPitch(ui->PitchOfTransducer->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnReconstructedSamplesChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetReconstructedSamples(ui->ReconstructedSamplesPerLine->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnReconstructedLinesChanged() { if (m_ControlInterface.IsNull()) { return; } if (m_OldReconstructionLines == 0) m_OldReconstructionLines = ui->ReconstructedLines->value(); m_ControlInterface->SetReconstructedLines(ui->ReconstructedLines->value()); ui->PitchOfTransducer->setValue(ui->PitchOfTransducer->value()*((double)m_OldReconstructionLines / (double)ui->ReconstructedLines->value())); m_OldReconstructionLines = ui->ReconstructedLines->value(); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnSpeedOfSoundChanged() { if (m_ControlInterface.IsNull()) { return; } m_ControlInterface->SetSpeedOfSound(ui->SpeedOfSound->value()); } //Bandpass void QmitkUSControlsCustomDiPhASDeviceWidget::OnBandpassEnabledChanged() { if (m_ControlInterface.IsNull()) { return; } if (ui->BandpassEnabled->currentText() == "On") { m_ControlInterface->SetBandpassEnabled(true); } else { m_ControlInterface->SetBandpassEnabled(false); } } void QmitkUSControlsCustomDiPhASDeviceWidget::OnLowCutChanged() { if (m_ControlInterface.IsNull()) { return; } unsigned int Low = ui->LowCut->value(); unsigned int High = ui->HighCut->value(); if (Low > High) { ui->LowCut->setValue(High); MITK_INFO << "User tried to set LowCut>HighCut."; } m_ControlInterface->SetLowCut(ui->LowCut->value()); } void QmitkUSControlsCustomDiPhASDeviceWidget::OnHighCutChanged() { if (m_ControlInterface.IsNull()) { return; } unsigned int Low = ui->LowCut->value(); unsigned int High = ui->HighCut->value(); if (Low > High) { ui->HighCut->setValue(Low); MITK_INFO << "User tried to set LowCut>HighCut."; } m_ControlInterface->SetHighCut(ui->HighCut->value()); } diff --git a/Modules/USUI/Qmitk/QmitkUSControlsCustomVideoDeviceWidget.cpp b/Modules/USUI/Qmitk/QmitkUSControlsCustomVideoDeviceWidget.cpp index bda64d6031..e997ecfd79 100644 --- a/Modules/USUI/Qmitk/QmitkUSControlsCustomVideoDeviceWidget.cpp +++ b/Modules/USUI/Qmitk/QmitkUSControlsCustomVideoDeviceWidget.cpp @@ -1,166 +1,165 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "QmitkUSControlsCustomVideoDeviceWidget.h" #include "ui_QmitkUSControlsCustomVideoDeviceWidget.h" #include #include QmitkUSControlsCustomVideoDeviceWidget::QmitkUSControlsCustomVideoDeviceWidget() : ui(new Ui::QmitkUSControlsCustomVideoDeviceWidget) { - this->RegisterService(); } QmitkUSControlsCustomVideoDeviceWidget::QmitkUSControlsCustomVideoDeviceWidget(QWidget *parent) : QmitkUSAbstractCustomWidget(parent), ui(new Ui::QmitkUSControlsCustomVideoDeviceWidget) { m_Cropping.left = 0; m_Cropping.top = 0; m_Cropping.right = 0; m_Cropping.bottom = 0; } QmitkUSControlsCustomVideoDeviceWidget::~QmitkUSControlsCustomVideoDeviceWidget() { delete ui; } std::string QmitkUSControlsCustomVideoDeviceWidget::GetDeviceClass() const { return mitk::USVideoDevice::GetDeviceClassStatic(); } QmitkUSAbstractCustomWidget* QmitkUSControlsCustomVideoDeviceWidget::Clone(QWidget* parent) const { QmitkUSAbstractCustomWidget* clonedWidget = new QmitkUSControlsCustomVideoDeviceWidget(parent); clonedWidget->SetDevice(this->GetDevice()); return clonedWidget; } void QmitkUSControlsCustomVideoDeviceWidget::OnDeviceSet() { m_ControlInterface = dynamic_cast (this->GetDevice()->GetControlInterfaceCustom().GetPointer()); if (m_ControlInterface.IsNotNull()) { mitk::USImageVideoSource::USImageCropping cropping = m_ControlInterface->GetCropArea(); ui->crop_left->setValue(cropping.left); ui->crop_right->setValue(cropping.right); ui->crop_bot->setValue(cropping.bottom); ui->crop_top->setValue(cropping.top); //get all probes and put their names into a combobox std::vector probes = m_ControlInterface->GetProbes(); for (std::vector::iterator it = probes.begin(); it != probes.end(); it++) { std::string probeName = (*it)->GetName(); ui->m_ProbeIdentifier->addItem(QString::fromUtf8(probeName.data(), probeName.size())); } connect(ui->m_UsDepth, SIGNAL(currentTextChanged(const QString &)), this, SLOT(OnDepthChanged())); connect(ui->m_ProbeIdentifier, SIGNAL(currentTextChanged(const QString &)), this, SLOT(OnProbeChanged())); } else { MITK_WARN("QmitkUSAbstractCustomWidget")("QmitkUSControlsCustomVideoDeviceWidget") << "Did not get a custom video device control interface."; } ui->crop_left->setEnabled(m_ControlInterface.IsNotNull()); ui->crop_right->setEnabled(m_ControlInterface.IsNotNull()); ui->crop_bot->setEnabled(m_ControlInterface.IsNotNull()); ui->crop_top->setEnabled(m_ControlInterface.IsNotNull()); } void QmitkUSControlsCustomVideoDeviceWidget::Initialize() { ui->setupUi(this); connect(ui->crop_left, SIGNAL(valueChanged(int)), this, SLOT(OnCropAreaChanged())); connect(ui->crop_right, SIGNAL(valueChanged(int)), this, SLOT(OnCropAreaChanged())); connect(ui->crop_top, SIGNAL(valueChanged(int)), this, SLOT(OnCropAreaChanged())); connect(ui->crop_bot, SIGNAL(valueChanged(int)), this, SLOT(OnCropAreaChanged())); } void QmitkUSControlsCustomVideoDeviceWidget::OnCropAreaChanged() { if (m_ControlInterface.IsNull()) { return; } mitk::USImageVideoSource::USImageCropping cropping; cropping.left = ui->crop_left->value(); cropping.top = ui->crop_top->value(); cropping.right = ui->crop_right->value(); cropping.bottom = ui->crop_bot->value(); try { m_ControlInterface->SetCropArea(cropping); m_Cropping = cropping; } catch (mitk::Exception e) { m_ControlInterface->SetCropArea(m_Cropping); // reset to last valid crop //reset values BlockSignalAndSetValue(ui->crop_left, m_Cropping.left); BlockSignalAndSetValue(ui->crop_right, m_Cropping.right); BlockSignalAndSetValue(ui->crop_top, m_Cropping.top); BlockSignalAndSetValue(ui->crop_bot, m_Cropping.bottom); // inform user QMessageBox msgBox; msgBox.setInformativeText("The crop area you specified is invalid.\nPlease make sure that no more pixels are cropped than are available."); msgBox.setStandardButtons(QMessageBox::Ok); msgBox.exec(); MITK_WARN << "User tried to crop beyond limits of the image"; } } void QmitkUSControlsCustomVideoDeviceWidget::OnDepthChanged() { double depth = ui->m_UsDepth->currentText().toDouble(); m_ControlInterface->SetNewDepth(depth); } void QmitkUSControlsCustomVideoDeviceWidget::OnProbeChanged() { std::string probename = ui->m_ProbeIdentifier->currentText().toStdString(); m_ControlInterface->SetNewProbeIdentifier(probename); SetDepthsForProbe(probename); } void QmitkUSControlsCustomVideoDeviceWidget::BlockSignalAndSetValue(QSpinBox* target, int value) { bool oldState = target->blockSignals(true); target->setValue(value); target->blockSignals(oldState); } void QmitkUSControlsCustomVideoDeviceWidget::SetDepthsForProbe(std::string probename) { ui->m_UsDepth->clear(); std::vector depths = m_ControlInterface->GetDepthsForProbe(probename); for (std::vector::iterator it = depths.begin(); it != depths.end(); it++) { ui->m_UsDepth->addItem(QString::number(*it)); } } diff --git a/Modules/USUI/mitkUSUIActivator.cpp b/Modules/USUI/mitkUSUIActivator.cpp index b827033f4f..f502a71789 100644 --- a/Modules/USUI/mitkUSUIActivator.cpp +++ b/Modules/USUI/mitkUSUIActivator.cpp @@ -1,41 +1,46 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include "mitkUSUIActivator.h" #include "QmitkUSControlsCustomVideoDeviceWidget.h" #include "QmitkUSControlsCustomDiPhASDeviceWidget.h" mitk::USUIActivator::USUIActivator() { } mitk::USUIActivator::~USUIActivator() { } -void mitk::USUIActivator::Load(us::ModuleContext* /*context*/) +void mitk::USUIActivator::Load(us::ModuleContext* context) { m_USCustomWidgets.push_back(new QmitkUSControlsCustomVideoDeviceWidget()); m_USCustomWidgets.push_back(new QmitkUSControlsCustomDiPhASDeviceWidget()); + + for (auto &widget : m_USCustomWidgets) + { + context->RegisterService(widget, widget->GetServiceProperties()); + } } void mitk::USUIActivator::Unload(us::ModuleContext* /*context*/) { - for (auto &elem : m_USCustomWidgets) + for (auto &widget : m_USCustomWidgets) { - delete elem; + delete widget; } } diff --git a/Plugins/org.mitk.gui.qt.igt.app.echotrack/files.cmake b/Plugins/org.mitk.gui.qt.igt.app.echotrack/files.cmake index 54901bd4e4..a980a60ba8 100644 --- a/Plugins/org.mitk.gui.qt.igt.app.echotrack/files.cmake +++ b/Plugins/org.mitk.gui.qt.igt.app.echotrack/files.cmake @@ -1,137 +1,136 @@ set(SRC_CPP_FILES ) set(INTERNAL_CPP_FILES org_mbi_gui_qt_usnavigation_Activator.cpp #USNavigation.cpp //not functional anymore. Delete code? QmitkUltrasoundCalibration.cpp QmitkUSNavigationMarkerPlacement.cpp QmitkUSNavigationPerspective.cpp mitkUSTargetPlacementQualityCalculator.cpp QmitkUSZonesDataModel.cpp QmitkUSNavigationCalibrationsDataModel.cpp QmitkUSZoneManagementColorDialogDelegate.cpp QmitkUSNavigationCalibrationRemoveDelegate.cpp QmitkUSNavigationCalibrationUpdateDepthDelegate.cpp Interactors/mitkUSZonesInteractor.cpp Interactors/mitkUSPointMarkInteractor.cpp Widgets/QmitkUSCombinedModalityCreationWidget.cpp Widgets/QmitkUSCombinedModalityEditWidget.cpp Widgets/QmitkUSNavigationFreezeButton.cpp Widgets/QmitkUSNavigationProcessWidget.cpp Widgets/QmitkUSNavigationZoneDistancesWidget.cpp Widgets/QmitkUSZoneManagementWidget.cpp Widgets/QmitkZoneProgressBar.cpp NavigationStepWidgets/QmitkUSAbstractNavigationStep.cpp NavigationStepWidgets/QmitkUSNavigationStepCombinedModality.cpp NavigationStepWidgets/QmitkUSNavigationStepTumourSelection.cpp NavigationStepWidgets/QmitkUSNavigationStepZoneMarking.cpp NavigationStepWidgets/QmitkUSNavigationStepPlacementPlanning.cpp NavigationStepWidgets/QmitkUSNavigationStepMarkerIntervention.cpp NavigationStepWidgets/QmitkUSNavigationStepPunctuationIntervention.cpp SettingsWidgets/QmitkUSNavigationCombinedSettingsWidget.cpp SettingsWidgets/QmitkUSNavigationAbstractSettingsWidget.cpp Filter/mitkUSNavigationTargetOcclusionFilter.cpp Filter/mitkUSNavigationTargetUpdateFilter.cpp Filter/mitkUSNavigationTargetIntersectionFilter.cpp IO/mitkUSNavigationCombinedModalityPersistence.cpp IO/mitkUSNavigationLoggingBackend.cpp IO/mitkUSNavigationExperimentLogging.cpp IO/mitkUSNavigationStepTimer.cpp ) set(UI_FILES #src/internal/USNavigationControls.ui //not functional anymore. Delete code? src/internal/QmitkUltrasoundCalibrationControls.ui src/internal/QmitkUSNavigationMarkerPlacement.ui src/internal/Widgets/QmitkUSCombinedModalityCreationWidget.ui src/internal/Widgets/QmitkUSCombinedModalityEditWidget.ui src/internal/Widgets/QmitkUSNavigationProcessWidget.ui src/internal/Widgets/QmitkUSZoneManagementWidget.ui src/internal/NavigationStepWidgets/QmitkUSAbstractNavigationStep.ui src/internal/NavigationStepWidgets/QmitkUSNavigationStepCombinedModality.ui src/internal/NavigationStepWidgets/QmitkUSNavigationStepTumourSelection.ui src/internal/NavigationStepWidgets/QmitkUSNavigationStepZoneMarking.ui src/internal/NavigationStepWidgets/QmitkUSNavigationStepPlacementPlanning.ui src/internal/NavigationStepWidgets/QmitkUSNavigationStepMarkerIntervention.ui src/internal/NavigationStepWidgets/QmitkUSNavigationStepPunctuationIntervention.ui src/internal/SettingsWidgets/QmitkUSNavigationCombinedSettingsWidget.ui ) set(MOC_H_FILES src/internal/org_mbi_gui_qt_usnavigation_Activator.h #src/internal/USNavigation.h //not functional anymore. Delete code? src/internal/QmitkUltrasoundCalibration.h src/internal/QmitkUSNavigationMarkerPlacement.h src/internal/QmitkUSZonesDataModel.h src/internal/QmitkUSNavigationCalibrationsDataModel.h src/internal/QmitkUSZoneManagementColorDialogDelegate.h src/internal/QmitkUSNavigationCalibrationRemoveDelegate.h src/internal/QmitkUSNavigationCalibrationUpdateDepthDelegate.h src/internal/QmitkUSNavigationPerspective.h src/internal/Widgets/QmitkUSCombinedModalityCreationWidget.h src/internal/Widgets/QmitkUSCombinedModalityEditWidget.h src/internal/Widgets/QmitkUSNavigationFreezeButton.h src/internal/Widgets/QmitkUSNavigationProcessWidget.h src/internal/Widgets/QmitkUSNavigationZoneDistancesWidget.h src/internal/Widgets/QmitkUSZoneManagementWidget.h src/internal/Widgets/QmitkZoneProgressBar.h src/internal/NavigationStepWidgets/QmitkUSAbstractNavigationStep.h src/internal/NavigationStepWidgets/QmitkUSNavigationStepCombinedModality.h src/internal/NavigationStepWidgets/QmitkUSNavigationStepTumourSelection.h src/internal/NavigationStepWidgets/QmitkUSNavigationStepZoneMarking.h src/internal/NavigationStepWidgets/QmitkUSNavigationStepPlacementPlanning.h src/internal/NavigationStepWidgets/QmitkUSNavigationStepMarkerIntervention.h src/internal/NavigationStepWidgets/QmitkUSNavigationStepPunctuationIntervention.h src/internal/SettingsWidgets/QmitkUSNavigationCombinedSettingsWidget.h src/internal/SettingsWidgets/QmitkUSNavigationAbstractSettingsWidget.h ) # list of resource files which can be used by the plug-in # system without loading the plug-ins shared library, # for example the icon used in the menu and tabs for the # plug-in views in the workbench set(CACHED_RESOURCE_FILES - # resources/icon.xpm //not functional anymore. Delete code? - resources/icon2.xpm + resources/icon_US_navigation.svg resources/icon_US_calibration.svg plugin.xml ) # list of Qt .qrc files which contain additional resources # specific to this plugin set(QRC_FILES resources/USNavigation.qrc ) set(CPP_FILES ) foreach(file ${SRC_CPP_FILES}) set(CPP_FILES ${CPP_FILES} src/${file}) endforeach(file ${SRC_CPP_FILES}) foreach(file ${INTERNAL_CPP_FILES}) set(CPP_FILES ${CPP_FILES} src/internal/${file}) endforeach(file ${INTERNAL_CPP_FILES}) set(RESOURCE_FILES Interactions/USPointMarkInteractions.xml Interactions/USZoneInteractions.xml Interactions/USZoneInteractionsHold.xml ) diff --git a/Plugins/org.mitk.gui.qt.igt.app.echotrack/plugin.xml b/Plugins/org.mitk.gui.qt.igt.app.echotrack/plugin.xml index 3e385bffbd..d3fd0791ff 100644 --- a/Plugins/org.mitk.gui.qt.igt.app.echotrack/plugin.xml +++ b/Plugins/org.mitk.gui.qt.igt.app.echotrack/plugin.xml @@ -1,26 +1,26 @@ + icon="resources/icon_US_navigation.svg" /> + icon="resources/icon_US_navigation.svg" /> diff --git a/Plugins/org.mitk.gui.qt.igt.app.echotrack/resources/icon2.xpm b/Plugins/org.mitk.gui.qt.igt.app.echotrack/resources/icon2.xpm index 5f1ba88fdb..259eaa4156 100644 --- a/Plugins/org.mitk.gui.qt.igt.app.echotrack/resources/icon2.xpm +++ b/Plugins/org.mitk.gui.qt.igt.app.echotrack/resources/icon2.xpm @@ -1,255 +1,255 @@ /* XPM */ -static char * icon2_xpm[] = { +static char * D:\dev\MITK_IGT3int\Plugins\org_mitk_gui_qt_igt_app_echotrack\resources\icon2_xpm[] = { "250 250 2 1", " c None", -". c #000000", +". c #00FF00", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " .. . 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", " ................................ ................................ ", " ............................... ............................... ", " ............................. ............................. ", " ........................... ........................... ", " ......................... ......................... ", " ....................... ....................... ", " .................... .................... ", " .................. ................. ", " .............. .............. ", " ........... ........... ", " ..... ..... ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " ", " "}; diff --git a/Plugins/org.mitk.gui.qt.igt.app.echotrack/resources/icon_US_navigation.svg b/Plugins/org.mitk.gui.qt.igt.app.echotrack/resources/icon_US_navigation.svg new file mode 100644 index 0000000000..a1ad58c1c5 --- /dev/null +++ b/Plugins/org.mitk.gui.qt.igt.app.echotrack/resources/icon_US_navigation.svg @@ -0,0 +1,59 @@ + + + + + + + + image/svg+xml + + + + + + + + + diff --git a/Plugins/org.mitk.gui.qt.igt.app.echotrack/src/internal/QmitkUltrasoundCalibrationControls.ui b/Plugins/org.mitk.gui.qt.igt.app.echotrack/src/internal/QmitkUltrasoundCalibrationControls.ui index 1b4e4a3d7e..cfd6e837aa 100644 --- a/Plugins/org.mitk.gui.qt.igt.app.echotrack/src/internal/QmitkUltrasoundCalibrationControls.ui +++ b/Plugins/org.mitk.gui.qt.igt.app.echotrack/src/internal/QmitkUltrasoundCalibrationControls.ui @@ -1,1163 +1,959 @@ QmitkUltrasoundCalibrationControls - + true 0 0 374 923 0 0 QmitkTemplate - - + + 0 0 - 1 + 2 0 0 - 200 - 57 + 362 + 388 Config false Start Calibration for Selected Device 0 0 - 356 - 824 + 362 + 388 Spatial Calibration - - - - 0 - 10 - 351 - 831 - - - - 1 - - - - Spacing - - - - - 10 - 150 - 281 - 41 - - - - - - - Add Point - - - - - - - Qt::Horizontal - - - QSizePolicy::Expanding - - - - 40 - 20 - - - - - - - - false - - - Freeze - - - - - - - - - 10 - 10 - 281 - 131 - - - - <html><head/><body><p>1. Freeze the US-Image.</p><p>2. Mark two points in the US-Image of which you know <br/>they are exactly 30mm apart in horizontal direction.</p><p>3. Marktwo more points in the US-Image of which you <br/>know they are exactly 20mm apart vertical direction.</p><p>4. Now you can click the &quot;Calculate Spacing&quot;-Button. <br/>The spacing is calculated and applied to the US-Image.</p></body></html> - - - Qt::AlignLeading|Qt::AlignLeft|Qt::AlignTop - - - - - - 10 - 200 - 281 - 192 - - - - - - - 20 - 400 - 261 - 23 - - - - Calculate Spacing - - - - - - Point Based - - - - - 10 - 10 - 221 - 16 - + + + + + 0 - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + Spacing + + + + + + <html><head/><body><p>1. Freeze the US-Image.</p><p>2. Mark two points in the US-Image of which you know <br/>they are exactly 30mm apart in horizontal direction.</p><p>3. Marktwo more points in the US-Image of which you <br/>know they are exactly 20mm apart vertical direction.</p><p>4. Now you can click the &quot;Calculate Spacing&quot;-Button. <br/>The spacing is calculated and applied to the US-Image.</p></body></html> + + + Qt::AlignLeading|Qt::AlignLeft|Qt::AlignTop + + + + + + + + + Add Point + + + + + + + Qt::Horizontal + + + QSizePolicy::Expanding + + + + 40 + 20 + + + + + + + + false + + + Freeze + + + + + + + + + + + + Calculate Spacing + + + + + + + + Point Based + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8.25pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:8pt; font-weight:600; text-decoration: underline;">Step 1: Collect Points</span></p></body></html> - - - - - - 10 - 30 - 261 - 91 - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">Slowly move a tracking tool into the image plane of the ultrasound. As soon as it becomes visible, click &quot;freeze&quot; and mark the point on the screen by moving the Crosshair to the pont in the US image (best: click in 2D Axial view).</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">Do this with as many points as necessary, then click calibrate to perform calibration.</p></body></html> - - - true - - - - - - 10 - 120 - 291 - 31 - - - - - 75 - true - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + true + + + + + + + + 75 + true + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8.25pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:8pt;">Tracking Status:</span></p></body></html> - - - - - false - - - - 10 - 620 - 301 - 23 - - - - Save Calibration - - - - - - 10 - 550 - 291 - 16 - - - - Qt::Horizontal - - - - - - 10 - 200 - 301 - 225 - - - - - - - 10 - 450 - 571 - 16 - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + + + + + + 0 + 40 + + + + + + + + + + Freeze + + + + + + + Qt::Horizontal + + + + 40 + 20 + + + + + + + + false + + + Add Point + + + + + + + + + + + + Qt::Horizontal + + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8.25pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:8pt; font-weight:600; text-decoration: underline;">Step 2: Calibrate (perform landmark transformation)</span></p></body></html> - - - - - - 10 - 160 - 301 - 25 - - - - - - - Freeze - - - - - - - Qt::Horizontal - - - - 40 - 20 - - - - - - - - false - - - Add Point - - - - - - - - - 10 - 430 - 301 - 21 - - - - Qt::Horizontal - - - - - - 10 - 510 - 301 - 23 - - - - Calibrate - - - - - - 10 - 590 - 584 - 17 - - - - Save additional logging information (MITK scene, etc.) - - - true - - - - - - 10 - 480 - 584 - 17 - - - - Activate Scaling during Calibration Transform - - - - - - 10 - 570 - 291 - 16 - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + + + + + Activate Scaling during Calibration Transform + + + + + + + Calibrate + + + + + + + Qt::Horizontal + + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8.25pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:8pt; font-weight:600; text-decoration: underline;">Step 3: Save calibration to hard disc</span></p></body></html> - - - - - - 10 - 680 - 301 - 23 - - - - Stop Calibration Process - - - - - - 10 - 710 - 301 - 23 - - - - Restart Current Calibration - - - - - - 100 - 120 - 211 - 31 - - - - - 0 - 40 - - - - - - - 10 - 650 - 301 - 20 - - - - Qt::Horizontal - - - - - - PLUS Connection - - - - - 10 - 10 - 301 - 241 - - - - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + + + + + Save additional logging information (MITK scene, etc.) + + + true + + + + + + + false + + + Save Calibration + + + + + + + Qt::Horizontal + + + + + + + Stop Calibration Process + + + + + + + Restart Current Calibration + + + + + + + + PLUS Connection + + + + + + + + + + + + false + + + + + + + + + + false + + + Setup PLUS Connection + + + + + + + false + + + + + + + + + + false + + + Start Streaming + + + + + + + + + + + + + + false + + + Get Calibration from PLUS + + + + + + + false + + + Save PLUS Calibration + + + + + + + Stop Calibration with PLUS + + + + + + + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-weight:600; text-decoration: underline;">Step 1: Calibrate using fCal</span></p></body></html> - - - Qt::AlignLeading|Qt::AlignLeft|Qt::AlignTop - - - - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + Qt::AlignLeading|Qt::AlignLeft|Qt::AlignTop + + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">1. Setup the Connection to PLUS</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">2. Start fCal with the EchoTrackCalibration Config file</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">3. Connect fcal to MITK, once it connected successfully you can click the &quot;Start Streaming&quot; Button below</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">4. Now follow the steps in fCal and don't forget to save the Calibration in the end</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">5. Finish fCal</p></body></html> - - - true - - - - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + true + + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-weight:600; text-decoration: underline;">Step 2: Get the calibration back from PLUS</span></p></body></html> - - - - - - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">1. Start a PLUS Server with the configfile you saved in the final step of fCal</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">2. Once the Server connected to MITK click the &quot;Start Streaming&quot; Button below</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">3. Now Click the &quot;Get Calibration from PLUS&quot;Button below</p> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;">4. You can now save the calibration</p></body></html> - - - true - - - - + + + true + + + + + + + + + Qt::Vertical + + + + 20 + 40 + + + + + + - - - - 10 - 270 - 301 - 281 - + + + + + Qt::Vertical - - + + + 20 + 40 + - - - false - - - - 0 - 90 - 299 - 23 - - - - Start Streaming - - - - - false - - - - 0 - 140 - 299 - 23 - - - - Get Calibration from PLUS - - - - - false - - - - 0 - 180 - 299 - 23 - - - - Save PLUS Calibration - - - - - - 0 - 220 - 299 - 23 - - - - Stop Calibration with PLUS - - - - - false - - - - 0 - 60 - 291 - 21 - - - - - - - - - - 0 - 120 - 281 - 16 - - - - - - - - - false - - - - 0 - 30 - 301 - 23 - - - - Setup PLUS Connection - - - - - false - - - - 0 - 10 - 291 - 21 - - - - - - - - - + + + 0 0 - 100 - 30 + 352 + 411 Evaluation - - - - 0 - 0 - 311 - 821 - - - - 1 - - - - Point Based Evaluation - - - - - 10 - 130 - 301 - 16 - - - - Mark the visible needle tip with the crosshair - - - - - - 10 - 10 - 301 - 31 - + + + + + 0 - - <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> + + + Point Based Evaluation + + + + + + <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8.25pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:8pt;">Bring the needle into the tracking volume, so the projection can be calculated</span></p></body></html> - - - true - - - - - - 10 - 70 - 291 - 31 - - - - Push the needle forward until it becomes visible in the Image - - - true - - - - - - 10 - 150 - 291 - 23 - - - - Step 3: Add Target Points - - - - - - 10 - 100 - 291 - 23 - - - - Step 2: Freeze Image - - - - - - 10 - 440 - 291 - 108 - - - - When done, save results - - - - - - Run Next Round - - - - - - - - - - Prefix: - - - Qt::AlignRight|Qt::AlignTrailing|Qt::AlignVCenter - - - - - - - Save Results - - - - - - - Path: - - - Qt::AlignRight|Qt::AlignTrailing|Qt::AlignVCenter - - - - - - - - - - - - 10 - 180 - 291 - 247 - - - - Control - - - - QFormLayout::AllNonFixedFieldsGrow - - - - - Tracking Status: - - - - - - - - - - # Projection Points: - - - - - - - # Target Points: - - - - - - - 0 - - - - - - - Evaluation TRE: - - - - - - - 0 - - - - - - - Projection TRE: - - - - - - - 0 - - - - - - - Calibration FRE: - - - - - - - 0 - - - - - - - 0 - - - - - - - - - 10 - 50 - 291 - 23 - - - - Step 1: Save Needle Projection - - - - - - Reference Device - - - - - 10 - 10 - 281 - 16 - - - - Choose pointer: - - - - - - 10 - 30 - 281 - 50 - - - - - 0 - 50 - - - - - - - 10 - 90 - 281 - 366 - - - - 1 - - - - - 0 - 0 - 179 - 82 - - - - Create Reference - - - - + + + true + + + + + + + Step 1: Save Needle Projection + + + + + + + Push the needle forward until it becomes visible in the Image + + + true + + + + + - Current reference points: + Step 2: Freeze Image - - + + + + Mark the visible needle tip with the crosshair + + - - + + - Add Current Pointer Tip Position + Step 3: Add Target Points + + + + + + + When done, save results + + + + + + Run Next Round + + + + + + + + + + Prefix: + + + Qt::AlignRight|Qt::AlignTrailing|Qt::AlignVCenter + + + + + + + Save Results + + + + + + + Path: + + + Qt::AlignRight|Qt::AlignTrailing|Qt::AlignVCenter + + + + + + + + + + + + + Control + + + QFormLayout::AllNonFixedFieldsGrow + + + + + Tracking Status: + + + + + + + + + + # Projection Points: + + + + + + + # Target Points: + + + + + + + 0 + + + + + + + Evaluation TRE: + + + + + + + 0 + + + + + + + Projection TRE: + + + + + + + 0 + + + + + + + Calibration FRE: + + + + + + + 0 + + + + + + + 0 + + + + - - + + Qt::Vertical 20 - 111 + 40 - - - - 0 - 0 - 281 - 312 - - - - Quick Verification + + + Reference Device - - - - - - + + + - Start Verification + Choose pointer: - - - - - - Current Point: - - - - - - - Qt::Horizontal - - - - 40 - 20 - - - - - - - - <none> - - - - - - - - - Add current pointer tip + + + + + 0 + 50 + - - - - Result: + + + + 0 + + + + 0 + 0 + 334 + 230 + + + + Create Reference + + + + + + Current reference points: + + + + + + + + + + Add Current Pointer Tip Position + + + + + + + Qt::Vertical + + + + 20 + 111 + + + + + + + + + + 0 + 0 + 334 + 269 + + + + Quick Verification + + + + + + + + + Start Verification + + + + + + + + + Current Point: + + + + + + + Qt::Horizontal + + + + 40 + 20 + + + + + + + + <none> + + + + + + + + + Add current pointer tip + + + + + + + Result: + + + + + + + + - - - - - + + + + + + Qt::Vertical + + + + 20 + 40 + + + + QmitkToolTrackingStatusWidget QWidget
QmitkToolTrackingStatusWidget.h
1
QmitkUSNavigationStepCombinedModality QWidget
src/internal/NavigationStepWidgets/QmitkUSNavigationStepCombinedModality.h
1
QmitkPointListWidget QWidget
QmitkPointListWidget.h
1
QmitkDataStorageComboBox QComboBox
QmitkDataStorageComboBox.h
QmitkNavigationDataSourceSelectionWidget QWidget
QmitkNavigationDataSourceSelectionWidget.h
1
OnStartCalibrationProcess() OnReset() OnStopCalibrationProcess()
diff --git a/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementEvaluation.svg b/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementEvaluation.svg index 041b2ba8c2..ea23647df9 100644 --- a/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementEvaluation.svg +++ b/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementEvaluation.svg @@ -1,1177 +1,1255 @@ image/svg+xml \ No newline at end of file diff --git a/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementTracking.svg b/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementTracking.svg index 7d859cb212..06541b5071 100644 --- a/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementTracking.svg +++ b/Plugins/org.mitk.gui.qt.igt.app.hummelprotocolmeasurements/resources/iconMeasurementTracking.svg @@ -1,1263 +1,1351 @@ image/svg+xml \ No newline at end of file diff --git a/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibration.cpp b/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibration.cpp index b3669e14d4..b0b4612b89 100644 --- a/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibration.cpp +++ b/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibration.cpp @@ -1,729 +1,748 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #include // Blueberry #include #include // Qmitk #include "QmitkIGTNavigationToolCalibration.h" // mitk #include #include #include #include #include #include #include // Qt #include #include //vtk #include const std::string QmitkIGTNavigationToolCalibration::VIEW_ID = "org.mitk.views.igtnavigationtoolcalibration"; QmitkIGTNavigationToolCalibration::QmitkIGTNavigationToolCalibration() { m_ToolTransformationWidget = new QmitkInteractiveTransformationWidget(); } QmitkIGTNavigationToolCalibration::~QmitkIGTNavigationToolCalibration() { //The following code is required due to a bug in the point list widget. //If this is removed, MITK crashes when closing the view: m_Controls.m_RegistrationLandmarkWidget->SetPointSetNode(nullptr); m_Controls.m_CalibrationLandmarkWidget->SetPointSetNode(nullptr); //clean up data storage this->GetDataStorage()->Remove(m_ToolTipPointPreview); delete m_ToolTransformationWidget; } void QmitkIGTNavigationToolCalibration::SetFocus() { } void QmitkIGTNavigationToolCalibration::OnToolCalibrationMethodChanged(int index) { //if pivot calibration (3) or manual(0) is chosen only calibration pointer is needed if (index == 0 || index == 3) { if (!CheckInitialization(false)) { return; } } else{ if (!CheckInitialization()) { return; } } UpdateManualToolTipCalibrationView(); m_Controls.m_CalibrationMethodsWidget->setCurrentIndex(index); m_IndexCurrentCalibrationMethod = index; } void QmitkIGTNavigationToolCalibration::CreateQtPartControl(QWidget *parent) { m_TrackingTimer = new QTimer(this); // create GUI widgets from the Qt Designer's .ui file m_Controls.setupUi(parent); connect(m_Controls.m_SetToolToCalibrate, SIGNAL(clicked()), this, SLOT(SetToolToCalibrate())); connect(m_Controls.m_SetPointer, SIGNAL(clicked()), this, SLOT(SetCalibrationPointer())); connect(m_TrackingTimer, SIGNAL(timeout()), this, SLOT(UpdateTrackingTimer())); connect(m_Controls.m_AddLandmark, SIGNAL(clicked()), this, SLOT(AddLandmark())); connect(m_Controls.m_SaveCalibratedTool, SIGNAL(clicked()), this, SLOT(SaveCalibratedTool())); connect(m_Controls.m_AddPivotPose, SIGNAL(clicked()), this, SLOT(OnAddPivotPose())); connect(m_Controls.m_ComputePivot, SIGNAL(clicked()), this, SLOT(OnComputePivot())); connect(m_Controls.m_UseComputedPivotPoint, SIGNAL(clicked()), this, SLOT(OnUseComputedPivotPoint())); connect(m_Controls.m_StartEditTooltipManually, SIGNAL(clicked()), this, SLOT(OnStartManualToolTipCalibration())); connect(m_Controls.m_GetPositions, SIGNAL(clicked()), this, SLOT(OnGetPositions())); connect(m_Controls.m_ToolAxis_X, SIGNAL(valueChanged(double)), this, SLOT(OnToolAxisSpinboxChanged())); connect(m_Controls.m_ToolAxis_Y, SIGNAL(valueChanged(double)), this, SLOT(OnToolAxisSpinboxChanged())); connect(m_Controls.m_ToolAxis_Z, SIGNAL(valueChanged(double)), this, SLOT(OnToolAxisSpinboxChanged())); connect(m_Controls.m_CalibrateToolAxis, SIGNAL(clicked()), this, SLOT(OnCalibrateToolAxis())); connect((QObject*)(m_ToolTransformationWidget), SIGNAL(EditToolTipFinished(mitk::AffineTransform3D::Pointer)), this, SLOT(OnManualEditToolTipFinished(mitk::AffineTransform3D::Pointer))); connect(m_Controls.m_CalibrationMethodComboBox, SIGNAL(currentIndexChanged(int)), this, SLOT(OnToolCalibrationMethodChanged(int))); connect((QObject*)(m_Controls.m_RunCalibrationButton), SIGNAL(clicked()), (QObject*) this, SLOT(OnRunSingleRefToolCalibrationClicked())); connect((QObject*)(m_Controls.m_CollectNavigationDataButton), SIGNAL(clicked()), (QObject*) this, SLOT(OnLoginSingleRefToolNavigationDataClicked())); connect((QObject*)(m_Controls.m_SetNewToolTipPosButton), SIGNAL(clicked()), (QObject*) this, SLOT(OnSetNewToolTipPosButtonClicked())); m_IDToolToCalibrate = -1; m_IDCalibrationPointer = -1; m_IndexCurrentCalibrationMethod = -1; m_OnLoginSingleRefToolNavigationDataClicked = false; m_NumberOfNavigationDataCounter = 0; m_NumberOfNavigationData = -1; //for pivot calibration m_OnAddPivotPoseClicked = false; PivotCount = 0; m_PivotPoses = std::vector(); m_CalibrationLandmarks = mitk::PointSet::New(); m_CalibrationLandmarksNode = mitk::DataNode::New(); m_CalibrationLandmarksNode->SetData(m_CalibrationLandmarks); m_Controls.m_CalibrationLandmarkWidget->SetPointSetNode(m_CalibrationLandmarksNode); m_RegistrationLandmarks = mitk::PointSet::New(); m_RegistrationLandmarksNode = mitk::DataNode::New(); m_RegistrationLandmarksNode->SetData(m_RegistrationLandmarks); m_Controls.m_RegistrationLandmarkWidget->SetPointSetNode(m_RegistrationLandmarksNode); m_ToolSurfaceInToolCoordinatesDataNode = mitk::DataNode::New(); m_ToolSurfaceInToolCoordinatesDataNode->SetName("ToolSurface(ToolCoordinates)"); m_LoggedNavigationDataDifferences = std::vector< mitk::NavigationData::Pointer >(); } void QmitkIGTNavigationToolCalibration::OnRunSingleRefToolCalibrationClicked() { if (!CheckInitialization()) { return; } mitk::NavigationData::Pointer ToolTipTransform = mitk::NavigationData::New(); if (m_Controls.m_CalibratePosition->isChecked()) { //1: Compute mean translational offset vector m_ResultOffsetVector.Fill(0); for (std::vector::iterator vecIter = m_LoggedNavigationDataOffsets.begin(); vecIter != m_LoggedNavigationDataOffsets.end(); vecIter++) { m_ResultOffsetVector[0] = m_ResultOffsetVector[0] + (*vecIter)[0]; m_ResultOffsetVector[1] = m_ResultOffsetVector[1] + (*vecIter)[1]; m_ResultOffsetVector[2] = m_ResultOffsetVector[2] + (*vecIter)[2]; } m_ResultOffsetVector[0] = m_ResultOffsetVector[0] / m_LoggedNavigationDataOffsets.size(); m_ResultOffsetVector[1] = m_ResultOffsetVector[1] / m_LoggedNavigationDataOffsets.size(); m_ResultOffsetVector[2] = m_ResultOffsetVector[2] / m_LoggedNavigationDataOffsets.size(); this->m_Controls.m_ResultOfCalibration->setText( QString("x: ") + QString(QString::number(m_ResultOffsetVector[0], 103, 3)) + QString("; y: ") + (QString::number(m_ResultOffsetVector[1], 103, 3)) + QString("; z: ") + (QString::number(m_ResultOffsetVector[2], 103, 3))); ToolTipTransform->SetPosition(m_ResultOffsetVector); } if (m_Controls.m_CalibrateOrientation->isChecked()) { //2: Compute mean orientation mitk::Quaternion meanOrientation; std::vector allOrientations = std::vector (); for (std::size_t i = 0; i < m_LoggedNavigationDataDifferences.size(); i++) { allOrientations.push_back(m_LoggedNavigationDataDifferences.at(i)->GetOrientation()); } meanOrientation = mitk::QuaternionAveraging::CalcAverage(allOrientations); this->m_Controls.m_ResultOfCalibrationOrientation->setText( QString("qx: ") + QString(QString::number(meanOrientation.x(), 103, 3)) + QString("; qy: ") + (QString::number(meanOrientation.y(), 103, 3)) + QString("; qz: ") + (QString::number(meanOrientation.z(), 103, 3)) + QString("; qr: ") + (QString::number(meanOrientation.r(), 103, 3))); ToolTipTransform->SetOrientation(meanOrientation); } MITK_INFO << "Computed calibration: "; MITK_INFO << "Translation Vector: " << ToolTipTransform->GetPosition(); MITK_INFO << "Quaternion: (" << ToolTipTransform->GetOrientation() << ")"; MITK_INFO << "Euler Angles [rad]: (" << ToolTipTransform->GetOrientation().rotation_euler_angles() << ")"; MITK_INFO << "Matrix:"; vnl_matrix_fixed rotMatrix = ToolTipTransform->GetOrientation().rotation_matrix_transpose(); MITK_INFO << rotMatrix[0][0] << " " << rotMatrix[0][1] << " " << rotMatrix[0][2] << std::endl; MITK_INFO << rotMatrix[1][0] << " " << rotMatrix[1][1] << " " << rotMatrix[1][2] << std::endl; MITK_INFO << rotMatrix[2][0] << " " << rotMatrix[2][1] << " " << rotMatrix[2][2] << std::endl; //3: write everything into the final tool tip transform and save it as member (it will be written to the tool later on) mitk::NavigationData::Pointer ToolTipInTrackingCoordinates = mitk::NavigationData::New(); ToolTipInTrackingCoordinates->Compose(ToolTipTransform); ToolTipInTrackingCoordinates->Compose(m_NavigationDataSourceOfToolToCalibrate->GetOutput(m_IDToolToCalibrate)); ShowToolTipPreview(ToolTipInTrackingCoordinates); m_Controls.m_SetNewToolTipPosButton->setEnabled(true); m_ComputedToolTipTransformation = ToolTipTransform; } void QmitkIGTNavigationToolCalibration::OnLoginSingleRefToolNavigationDataClicked() { if (!CheckInitialization()) { return; } //reset old data m_LoggedNavigationDataOffsets.clear(); m_LoggedNavigationDataDifferences.clear(); m_OnLoginSingleRefToolNavigationDataClicked = true; m_Controls.m_CollectNavigationDataButton->setEnabled(false); m_NumberOfNavigationData = m_Controls.m_NumberOfNavigationDataToCollect->value(); MITK_INFO << "Collecting " << m_NumberOfNavigationData << " NavigationData ... " << endl; } void QmitkIGTNavigationToolCalibration::LoginSingleRefToolNavigationData() { if (!CheckInitialization()) { return; } if (m_NumberOfNavigationDataCounter < m_NumberOfNavigationData) { //update label text QString labelText = "Collecting Data: " + QString::number(m_NumberOfNavigationDataCounter); m_Controls.m_CollectionStatus->setText(labelText); mitk::NavigationData::Pointer referenceTool = m_NavigationDataSourceOfCalibrationPointer->GetOutput(m_IDCalibrationPointer); mitk::NavigationData::Pointer toolToCalibrate = m_NavigationDataSourceOfToolToCalibrate->GetOutput(m_IDToolToCalibrate); //compute difference: // differenceND = toolToCalibrate^-1 * referenceTool mitk::NavigationData::Pointer differenceND = mitk::NavigationData::New(); differenceND->Compose(referenceTool); differenceND->Compose(toolToCalibrate->GetInverse()); //inverse mode... if (m_Controls.m_InvertQuaternions->isChecked()) { // negate identity matrix to directly show parameters that will set up in NDI 6D Software Architect differenceND = differenceND->GetInverse(); } //save difference in member m_LoggedNavigationDataOffsets.push_back(differenceND->GetPosition()); m_LoggedNavigationDataDifferences.push_back(differenceND); m_NumberOfNavigationDataCounter++; } if (m_NumberOfNavigationDataCounter == m_NumberOfNavigationData) { m_NumberOfNavigationDataCounter = 0; m_OnLoginSingleRefToolNavigationDataClicked = false; m_Controls.m_CollectNavigationDataButton->setEnabled(true); m_Controls.m_RunCalibrationButton->setEnabled(true); MITK_INFO << "Collecting " << m_NumberOfNavigationData << " NavigationData ... Finished" << endl; QString labelText = "Collected " + QString::number(m_NumberOfNavigationData) + " data samples!"; m_Controls.m_CollectionStatus->setText(labelText); } } void QmitkIGTNavigationToolCalibration::OnSetNewToolTipPosButtonClicked() { ApplyToolTipTransform(m_ComputedToolTipTransformation); RemoveToolTipPreview(); } void QmitkIGTNavigationToolCalibration::ClearOldPivot() { mitk::NavigationData::Pointer tempND = mitk::NavigationData::New(); this->ApplyToolTipTransform(tempND); UpdateManualToolTipCalibrationView(); //m_ManualToolTipEditWidget->hide(); //TODO this->GetDataStorage()->Remove(m_ToolSurfaceInToolCoordinatesDataNode); } void QmitkIGTNavigationToolCalibration::OnAddPivotPose() { ClearOldPivot(); //When the collect Poses Button is Clicked m_OnAddPivotPoseClicked = true; m_NumberOfNavigationData = m_Controls.m_PosesToCollect->value(); } void QmitkIGTNavigationToolCalibration::AddPivotPose() { //Save the poses to be used in computation if (PivotCount < m_NumberOfNavigationData) { mitk::NavigationData::Pointer currentPose = mitk::NavigationData::New(); currentPose->Graft(m_Controls.m_SelectionWidget->GetSelectedNavigationDataSource()->GetOutput(m_IDToolToCalibrate)); m_PivotPoses.push_back(currentPose); m_Controls.m_PoseNumber->setText(QString::number(m_PivotPoses.size())); PivotCount++; } if (PivotCount == m_NumberOfNavigationData) { m_OnAddPivotPoseClicked = false; } } void QmitkIGTNavigationToolCalibration::OnComputePivot() { mitk::PivotCalibration::Pointer myPivotCalibration = mitk::PivotCalibration::New(); for (std::size_t i = 0; i < this->m_PivotPoses.size(); i++) { myPivotCalibration->AddNavigationData(m_PivotPoses.at(i)); } QString resultString; if (myPivotCalibration->ComputePivotResult()) { mitk::NavigationData::Pointer markerTransformationTrackingCoordinates = m_PivotPoses.at(0); //Get computed pivot transfromation in tool coordinates mitk::NavigationData::Pointer ToolTipToTool = mitk::NavigationData::New(); ToolTipToTool->SetPosition(myPivotCalibration->GetResultPivotPoint()); ToolTipToTool->SetOrientation(mitk::Quaternion(0,0,0,1)); mitk::NavigationData::Pointer TrackerToTool = mitk::NavigationData::New(); TrackerToTool->SetOrientation(markerTransformationTrackingCoordinates->GetOrientation()); TrackerToTool->SetPosition(markerTransformationTrackingCoordinates->GetPosition()); TrackerToTool->Compose(ToolTipToTool); // Compute pivot point in relation to marker transformation for preview mitk::NavigationData::Pointer ToolTipToTracker = mitk::NavigationData::New(); ToolTipToTracker->Compose(ToolTipToTool); ToolTipToTracker->Compose(markerTransformationTrackingCoordinates); //add the preview node to the data storage ShowToolTipPreview(ToolTipToTracker); //parse result string resultString = QString("Pivot computation succeeded!\n") + QString("RMS Error: ") + QString::number(myPivotCalibration->GetResultRMSError()) + QString("\n") + QString("Pivot Point: ") + QString::number(myPivotCalibration->GetResultPivotPoint()[0]) + ";" + QString::number(myPivotCalibration->GetResultPivotPoint()[1]) + ";" + QString::number(myPivotCalibration->GetResultPivotPoint()[2]) + QString("\n"); //finally: save results to member variable m_ComputedToolTipTransformation = ToolTipToTool; //enable button to use the computed point with the tool m_Controls.m_UseComputedPivotPoint->setEnabled(true); } else { resultString = "Pivot computation failed!"; } MITK_INFO << resultString.toStdString().c_str(); m_Controls.m_ResultText->setText(resultString); } void QmitkIGTNavigationToolCalibration::UpdatePivotCount() { PivotCount = 0; while (!m_PivotPoses.empty()) { m_PivotPoses.pop_back(); } m_Controls.m_PoseNumber->setText(QString::number(PivotCount)); } void QmitkIGTNavigationToolCalibration::OnUseComputedPivotPoint() { RemoveToolTipPreview(); QString resultString = QString("Pivoted tool tip transformation was written to the tool ") + m_ToolToCalibrate->GetToolName().c_str(); ApplyToolTipTransform(m_ComputedToolTipTransformation, resultString.toStdString()); m_Controls.m_ResultText->setText(resultString); UpdatePivotCount(); } void QmitkIGTNavigationToolCalibration::ApplyToolTipTransform(mitk::NavigationData::Pointer ToolTipTransformInToolCoordinates, std::string message) { if (!CheckInitialization(false)) { return; } //Update tool in tool storage m_ToolToCalibrate->SetToolTipPosition(ToolTipTransformInToolCoordinates->GetPosition()); m_ToolToCalibrate->SetToolAxisOrientation(ToolTipTransformInToolCoordinates->GetOrientation()); //And also update tracking device, so the transform is directly used mitk::TrackingDeviceSource::Pointer trackingDeviceSource; try { trackingDeviceSource = dynamic_cast(m_NavigationDataSourceOfToolToCalibrate.GetPointer()); mitk::TrackingTool::Pointer TrackingToolToCalibrate = trackingDeviceSource->GetTrackingDevice()->GetTool(m_IDToolToCalibrate); TrackingToolToCalibrate->SetToolTipPosition(ToolTipTransformInToolCoordinates->GetPosition(), ToolTipTransformInToolCoordinates->GetOrientation()); } catch (std::exception& e) { MITK_ERROR << "Error while trying to set the tool tip to the running tracking device. Aborting! (" << e.what() << ")"; } MITK_INFO << message; } void QmitkIGTNavigationToolCalibration::ShowToolTipPreview(mitk::NavigationData::Pointer ToolTipInTrackingCoordinates) { if(m_ToolTipPointPreview.IsNull()) { m_ToolTipPointPreview = mitk::DataNode::New(); m_ToolTipPointPreview->SetName("Modified Tool Tip Preview"); mitk::Color blue; blue.SetBlue(1); m_ToolTipPointPreview->SetColor(blue); mitk::Surface::Pointer mySphere = mitk::Surface::New(); vtkSmartPointer vtkData = vtkSmartPointer::New(); vtkData->SetRadius(3.0f); vtkData->SetCenter(0.0, 0.0, 0.0); vtkData->Update(); mySphere->SetVtkPolyData(vtkData->GetOutput()); m_ToolTipPointPreview->SetData(mySphere); this->GetDataStorage()->Add(m_ToolTipPointPreview); } m_ToolTipPointPreview->GetData()->GetGeometry()->SetIndexToWorldTransform(ToolTipInTrackingCoordinates->GetAffineTransform3D()); } void QmitkIGTNavigationToolCalibration::RemoveToolTipPreview() { this->GetDataStorage()->Remove(m_ToolTipPointPreview.GetPointer()); } void QmitkIGTNavigationToolCalibration::UpdateManualToolTipCalibrationView() { if (m_ToolToCalibrate.IsNull()) { return; } //parse human readable transformation data and display it std::stringstream translation; std::stringstream orientation; translation << m_ToolToCalibrate->GetToolTipPosition(); orientation << "Quaternion: (" << m_ToolToCalibrate->GetToolAxisOrientation() << ")" << std::endl; orientation << std::endl; orientation << "Euler Angles [rad]: (" << m_ToolToCalibrate->GetToolAxisOrientation().rotation_euler_angles() << ")" << std::endl; orientation << std::endl; orientation << "Matrix:" << std::endl; vnl_matrix_fixed rotMatrix = m_ToolToCalibrate->GetToolAxisOrientation().rotation_matrix_transpose(); orientation << rotMatrix[0][0] << " " << rotMatrix[0][1] << " " << rotMatrix[0][2] << std::endl; orientation << rotMatrix[1][0] << " " << rotMatrix[1][1] << " " << rotMatrix[1][2] << std::endl; orientation << rotMatrix[2][0] << " " << rotMatrix[2][1] << " " << rotMatrix[2][2] << std::endl; m_Controls.m_ManualCurrentTranslation->setText(translation.str().c_str()); m_Controls.m_ManualCurrentOrientation->setPlainText(orientation.str().c_str()); } void QmitkIGTNavigationToolCalibration::OnStartManualToolTipCalibration() { if (!CheckInitialization(false)) { return; } m_ToolTransformationWidget->SetToolToEdit(m_ToolToCalibrate); m_ToolTransformationWidget->SetDefaultOffset(m_ToolToCalibrate->GetToolTipPosition()); m_ToolTransformationWidget->SetDefaultRotation(m_ToolToCalibrate->GetToolAxisOrientation()); m_ToolTransformationWidget->open(); } void QmitkIGTNavigationToolCalibration::OnManualEditToolTipFinished(mitk::AffineTransform3D::Pointer toolTip) { //This function is called, when the toolTipEdit view is closed. //if user pressed cancle, nullptr is returned. Do nothing. Else, set values. if (toolTip) { mitk::NavigationData::Pointer tempND = mitk::NavigationData::New(toolTip);//Convert to Navigation data for simple transversion to quaternion QString resultString = QString("Manual edited values are written to ") + m_ToolToCalibrate->GetToolName().c_str(); ApplyToolTipTransform(tempND, resultString.toStdString()); m_Controls.m_ResultText->setText(resultString); } UpdateManualToolTipCalibrationView(); } void QmitkIGTNavigationToolCalibration::OnGetPositions() { if (!CheckInitialization(true)) { return; } //Navigation Data from Tool which should be calibrated if (!m_AxisCalibration_ToolToCalibrate) m_AxisCalibration_ToolToCalibrate = mitk::NavigationData::New(); m_AxisCalibration_ToolToCalibrate->Graft(m_Controls.m_SelectionWidget->GetSelectedNavigationDataSource()->GetOutput(m_IDToolToCalibrate)); //Navigation Data from calibration pointer tool if (!m_AxisCalibration_NavDataCalibratingTool) m_AxisCalibration_NavDataCalibratingTool = mitk::NavigationData::New(); m_AxisCalibration_NavDataCalibratingTool->Graft(m_Controls.m_SelectionWidget->GetSelectedNavigationDataSource()->GetOutput(m_IDCalibrationPointer)); MITK_DEBUG << "Positions for tool axis calibration:"; MITK_DEBUG << " ToolTip: " << m_AxisCalibration_ToolToCalibrate->GetPosition() << ","; MITK_DEBUG << " Rotation: \n" << m_AxisCalibration_ToolToCalibrate->GetRotationMatrix(); MITK_DEBUG << " End of the tool: " << m_AxisCalibration_NavDataCalibratingTool->GetPosition(); QString _label = "Position recorded: " + QString::number(m_AxisCalibration_NavDataCalibratingTool->GetPosition()[0], 'f', 1) + ", " + QString::number(m_AxisCalibration_NavDataCalibratingTool->GetPosition()[1], 'f', 1) + ", " + QString::number(m_AxisCalibration_NavDataCalibratingTool->GetPosition()[2], 'f', 1); m_Controls.m_ToolAxisPositionLabel->setText(_label); } void QmitkIGTNavigationToolCalibration::OnCalibrateToolAxis() { if (!m_AxisCalibration_ToolToCalibrate || !m_AxisCalibration_NavDataCalibratingTool) { MITK_ERROR << "Please record position first."; return; } //Calculate the tool tip //here is an explanation, what is happening here: /* The axis is equal to the (tool tip) minus the (end of the tool) in tool coordinates of the tool which should be calibrated. The tool tip is defined as the origin of the tool coordinate system. The end of the tool is recorded by the calibration pointer's position and is transformed into the coordinate system of the tool to be calibrated Normalize it. */ //m_CalibratedToolAxis = -m_AxisCalibration_ToolToCalibrate->TransformPoint(m_AxisCalibration_NavDataCalibratingTool->GetPosition()).GetVectorFromOrigin(); m_CalibratedToolAxis = -m_AxisCalibration_ToolToCalibrate->GetInverse()->TransformPoint(m_AxisCalibration_NavDataCalibratingTool->GetPosition()).GetVectorFromOrigin(); MITK_DEBUG << "Tool Endpoint in Tool coordinates: " << m_CalibratedToolAxis; m_CalibratedToolAxis.Normalize(); MITK_DEBUG << "Tool Axis: " << m_CalibratedToolAxis; m_ToolToCalibrate->SetToolAxis(m_CalibratedToolAxis); // Update TrackingTool m_ComputedToolTipTransformation->SetPosition(m_ToolToCalibrate->GetToolTipPosition()); m_ComputedToolTipTransformation->SetOrientation(m_ToolToCalibrate->GetToolAxisOrientation()); ApplyToolTipTransform(m_ComputedToolTipTransformation); //Update GUI QString calibratedToolAxisString = "Tool Axis: " + QString::number(m_CalibratedToolAxis.GetElement(0), 'f', 3) + ", " + QString::number(m_CalibratedToolAxis.GetElement(1), 'f', 3) + ", " + QString::number(m_CalibratedToolAxis.GetElement(2), 'f', 3); m_Controls.m_ToolAxisCalibrationLabel->setText(calibratedToolAxisString); //Block QT signals, we don't want to emit SpinboxChanged on the first value to overwrite the next ones m_Controls.m_ToolAxis_X->blockSignals(true); m_Controls.m_ToolAxis_Y->blockSignals(true); m_Controls.m_ToolAxis_Z->blockSignals(true); m_Controls.m_ToolAxis_X->setValue(m_CalibratedToolAxis[0]); m_Controls.m_ToolAxis_Y->setValue(m_CalibratedToolAxis[1]); m_Controls.m_ToolAxis_Z->setValue(m_CalibratedToolAxis[2]); m_Controls.m_ToolAxis_X->blockSignals(false); m_Controls.m_ToolAxis_Y->blockSignals(false); m_Controls.m_ToolAxis_Z->blockSignals(false); } void QmitkIGTNavigationToolCalibration::OnToolAxisSpinboxChanged() { m_CalibratedToolAxis.SetElement(0, m_Controls.m_ToolAxis_X->value()); m_CalibratedToolAxis.SetElement(1, m_Controls.m_ToolAxis_Y->value()); m_CalibratedToolAxis.SetElement(2, m_Controls.m_ToolAxis_Z->value()); m_ToolToCalibrate->SetToolAxis(m_CalibratedToolAxis); + // Update TrackingTool + if (m_ComputedToolTipTransformation.IsNull()) + { + m_ComputedToolTipTransformation = mitk::NavigationData::New(); + } + m_ComputedToolTipTransformation->SetPosition(m_ToolToCalibrate->GetToolTipPosition()); + m_ComputedToolTipTransformation->SetOrientation(m_ToolToCalibrate->GetToolAxisOrientation()); + ApplyToolTipTransform(m_ComputedToolTipTransformation); + MITK_INFO << "Tool axis changed to " << m_CalibratedToolAxis; } void QmitkIGTNavigationToolCalibration::SetToolToCalibrate() { m_IDToolToCalibrate = m_Controls.m_SelectionWidget->GetSelectedToolID(); if (m_IDToolToCalibrate == -1) //no valid tool to calibrate { m_Controls.m_CalToolLabel->setText(""); m_Controls.m_StatusWidgetToolToCalibrate->RemoveStatusLabels(); m_TrackingTimer->stop(); } else { m_ToolToCalibrate = m_Controls.m_SelectionWidget->GetSelectedNavigationTool(); m_NavigationDataSourceOfToolToCalibrate = m_Controls.m_SelectionWidget->GetSelectedNavigationDataSource(); m_Controls.m_CalToolLabel->setText(m_NavigationDataSourceOfToolToCalibrate->GetOutput(m_IDToolToCalibrate)->GetName()); //initialize widget m_Controls.m_StatusWidgetToolToCalibrate->RemoveStatusLabels(); m_Controls.m_StatusWidgetToolToCalibrate->SetShowPositions(true); m_Controls.m_StatusWidgetToolToCalibrate->SetTextAlignment(Qt::AlignLeft); m_Controls.m_StatusWidgetToolToCalibrate->AddNavigationData(m_NavigationDataSourceOfToolToCalibrate->GetOutput(m_IDToolToCalibrate)); m_Controls.m_StatusWidgetToolToCalibrate->ShowStatusLabels(); //initialize manual tool tip calibration view UpdateManualToolTipCalibrationView(); //save tool surface in tool coordinates for further editing mitk::Surface::Pointer ToolSurface = dynamic_cast(m_ToolToCalibrate->GetDataNode()->GetData())->Clone(); m_ToolSurfaceInToolCoordinatesDataNode->SetData(ToolSurface); m_ToolSurfaceInToolCoordinatesDataNode->GetData()->GetGeometry()->SetIdentity(); - + // update tool tip and rotation information for tool tip calibration tab UpdateManualToolTipCalibrationView(); + // update tool axis information for tool axis calibration tab + mitk::Point3D toolAxis = m_ToolToCalibrate->GetToolAxis(); + m_CalibratedToolAxis[0] = toolAxis[0]; + m_CalibratedToolAxis[1] = toolAxis[1]; + m_CalibratedToolAxis[2] = toolAxis[2]; + m_Controls.m_ToolAxis_X->blockSignals(true); m_Controls.m_ToolAxis_Y->blockSignals(true); m_Controls.m_ToolAxis_Z->blockSignals(true); + m_Controls.m_ToolAxis_X->setValue(m_CalibratedToolAxis[0]); + m_Controls.m_ToolAxis_Y->setValue(m_CalibratedToolAxis[1]); + m_Controls.m_ToolAxis_Z->setValue(m_CalibratedToolAxis[2]); + m_Controls.m_ToolAxis_X->blockSignals(false); m_Controls.m_ToolAxis_Y->blockSignals(false); m_Controls.m_ToolAxis_Z->blockSignals(false); //start updating timer for status widgets, etc. if (!m_TrackingTimer->isActive()) m_TrackingTimer->start(100); } } void QmitkIGTNavigationToolCalibration::SetCalibrationPointer() { m_IDCalibrationPointer = m_Controls.m_SelectionWidget->GetSelectedToolID(); if (m_IDCalibrationPointer == -1) { m_Controls.m_PointerLabel->setText(""); m_Controls.m_StatusWidgetCalibrationPointer->RemoveStatusLabels(); m_TrackingTimer->stop(); } else { m_NavigationDataSourceOfCalibrationPointer = m_Controls.m_SelectionWidget->GetSelectedNavigationDataSource(); m_Controls.m_PointerLabel->setText(m_NavigationDataSourceOfCalibrationPointer->GetOutput(m_IDCalibrationPointer)->GetName()); //initialize widget m_Controls.m_StatusWidgetCalibrationPointer->RemoveStatusLabels(); m_Controls.m_StatusWidgetCalibrationPointer->SetShowPositions(true); m_Controls.m_StatusWidgetCalibrationPointer->SetTextAlignment(Qt::AlignLeft); m_Controls.m_StatusWidgetCalibrationPointer->AddNavigationData(m_NavigationDataSourceOfCalibrationPointer->GetOutput(m_IDCalibrationPointer)); m_Controls.m_StatusWidgetCalibrationPointer->ShowStatusLabels(); if (!m_TrackingTimer->isActive()) m_TrackingTimer->start(100); } } void QmitkIGTNavigationToolCalibration::UpdateOffsetCoordinates() { if (m_NavigationDataSourceOfCalibrationPointer.IsNull() || m_NavigationDataSourceOfToolToCalibrate.IsNull()) { return; } mitk::NavigationData::Pointer referenceToolND = m_NavigationDataSourceOfCalibrationPointer->GetOutput(m_IDCalibrationPointer); mitk::NavigationData::Pointer toolToCalibrateND = m_NavigationDataSourceOfToolToCalibrate->GetOutput(m_IDToolToCalibrate); if (referenceToolND->IsDataValid() && toolToCalibrateND->IsDataValid()) { //computation: difference between both tools (in tool coordinates) //differenceND = toolToCalibrateND^-1 * referenceToolND mitk::NavigationData::Pointer differenceND = mitk::NavigationData::New(); differenceND->Compose(referenceToolND); differenceND->Compose(toolToCalibrateND->GetInverse()); //display this orientation in the UI m_Controls.m_OffsetCoordinates->setText( QString("x: ") + QString(QString::number(differenceND->GetPosition()[0], 103, 3)) + QString("; y: ") + (QString::number(differenceND->GetPosition()[1], 103, 3)) + QString("; z: ") + (QString::number(differenceND->GetPosition()[2], 103, 3))); m_Controls.m_OrientationOffsetCoordinates->setText( QString("qx: ") + QString(QString::number(differenceND->GetOrientation().x(), 103, 3)) + QString("; qy: ") + (QString::number(differenceND->GetOrientation().y(), 103, 3)) + QString("; qz: ") + (QString::number(differenceND->GetOrientation().z(), 103, 3)) + QString("; qr: ") + (QString::number(differenceND->GetOrientation().r(), 103, 3))); //also update preview if active if (m_ToolTipPointPreview.IsNotNull()) //NOT WORKING! TODO: fix or remove! { mitk::NavigationData::Pointer ToolTipTransform = mitk::NavigationData::New(); ToolTipTransform->SetPosition(m_ResultOffsetVector); mitk::NavigationData::Pointer ToolTipInTrackingCoordinates = mitk::NavigationData::New(); //maybe store as for better peformance... ToolTipInTrackingCoordinates->Compose(m_NavigationDataSourceOfToolToCalibrate->GetOutput(m_IDToolToCalibrate)); ToolTipInTrackingCoordinates->Compose(ToolTipTransform); m_ToolTipPointPreview->GetData()->GetGeometry()->SetIndexToWorldTransform(ToolTipInTrackingCoordinates->GetAffineTransform3D()); } } } void QmitkIGTNavigationToolCalibration::UpdateTrackingTimer() { m_Controls.m_StatusWidgetToolToCalibrate->Refresh(); m_Controls.m_StatusWidgetCalibrationPointer->Refresh(); if (m_OnLoginSingleRefToolNavigationDataClicked) LoginSingleRefToolNavigationData(); if (m_OnAddPivotPoseClicked) AddPivotPose(); // 1 == Single Reference Calibration Method if (m_IndexCurrentCalibrationMethod == 1) UpdateOffsetCoordinates(); } void QmitkIGTNavigationToolCalibration::AddLandmark() { if (!CheckInitialization()) { return; } mitk::NavigationData::Pointer navDataTool = m_NavigationDataSourceOfToolToCalibrate->GetOutput(m_IDToolToCalibrate); mitk::Point3D landmark = m_NavigationDataSourceOfCalibrationPointer->GetOutput(m_IDCalibrationPointer)->GetPosition(); //convert to itk transform itk::Vector translation; for (int k = 0; k < 3; k++) translation[k] = navDataTool->GetPosition()[k]; itk::Matrix rotation; for (int k = 0; k < 3; k++) for (int l = 0; l < 3; l++) rotation[k][l] = navDataTool->GetOrientation().rotation_matrix_transpose()[k][l]; rotation = rotation.GetTranspose(); itk::Vector landmarkItk; landmarkItk[0] = landmark[0]; landmarkItk[1] = landmark[1]; landmarkItk[2] = landmark[2]; //compute landmark in tool coordinates itk::Matrix rotationInverse; for (int k = 0; k < 3; k++) for (int l = 0; l < 3; l++) rotationInverse[k][l] = rotation.GetInverse()[k][l]; landmarkItk = rotationInverse * (landmarkItk - translation); //convert back and add landmark to pointset landmark[0] = landmarkItk[0]; landmark[1] = landmarkItk[1]; landmark[2] = landmarkItk[2]; m_RegistrationLandmarks->InsertPoint(m_RegistrationLandmarks->GetSize(), landmark); } void QmitkIGTNavigationToolCalibration::SaveCalibratedTool() { if (m_ToolToCalibrate.IsNotNull()) { mitk::NavigationTool::Pointer calibratedTool = m_ToolToCalibrate; calibratedTool->SetToolControlPoints(this->m_CalibrationLandmarks); calibratedTool->SetToolLandmarks(this->m_RegistrationLandmarks); mitk::NavigationToolWriter::Pointer myWriter = mitk::NavigationToolWriter::New(); std::string filename = QFileDialog::getSaveFileName(nullptr,tr("Save Navigation Tool"), "/", "*.IGTTool").toUtf8().data(); if (filename == "") return; if (myWriter->DoWrite(filename, calibratedTool)) MITK_INFO << "Saved calibrated tool to file " << filename; else MITK_WARN << "Can't write tool to file " << filename; } else { MITK_ERROR << "Did not find navigation tool storage of calibrated tool, aborting!"; } } bool QmitkIGTNavigationToolCalibration::CheckInitialization(bool CalibrationPointerRequired) { if ((m_IDToolToCalibrate == -1) || ((CalibrationPointerRequired) && (m_IDCalibrationPointer == -1) ) ) { QMessageBox msgBox; msgBox.setText("Tool to calibrate and/or calibration pointer not initialized, cannot proceed!"); msgBox.exec(); return false; } else { return true; } } diff --git a/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibrationControls.ui b/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibrationControls.ui index 8650474fe3..6a5521aa9a 100644 --- a/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibrationControls.ui +++ b/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkIGTNavigationToolCalibrationControls.ui @@ -1,1120 +1,1133 @@ IGTNavigationToolCalibrationControls 0 0 557 958 QmitkTemplate <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:8.25pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:10pt; font-weight:600;">Navigation Tool Calibration</span></p></body></html> Tool to calibrate 0 35 16777215 50 Calibration pointer 0 35 true 75 true 0 Qt::ElideMiddle Initialization <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:7.8pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:8pt; text-decoration: underline;">Choose Tracking Device and Tools</span></p></body></html> Qt::Horizontal 120 0 Tool to Calibrate: Qt::Horizontal 40 20 <none> Qt::Horizontal 40 20 150 0 Use as Tool to Calibrate Qt::Horizontal 120 0 Calibration Pointer: Qt::Horizontal 40 20 <none> Qt::Horizontal 40 20 150 0 Use as Calibration Pointer Qt::Horizontal Qt::Vertical 20 586 Tool Tip Calibration 50 false Calibration Method: Qt::Horizontal 40 20 Manual Single Reference Tool Pivoting Qt::Horizontal 0 Current Tool Tip Translation: true true Current Tool Tip Orientation: true true Qt::Horizontal 40 20 Start Edit Tooltip 0 0 319 160 319 160 QFrame { border-image: url(:/IGTNavigationToolCalibration/Description.svg); } QFrame::Box QFrame::Plain 1 0 0 Current Offset between Tool to calibrate and Calibration pointer: Pos: 8 Qt::AlignCenter Rot: 8 Qt::AlignCenter Qt::Horizontal 0 0 Number of tracking data to collect: 0 0 10000 100 Qt::AlignCenter 0 0 1: Collect Navigation Data Qt::Horizontal Invert calibration transformation Calibrate position true Calibrate orientation true false 2: Run Calibration Qt::Horizontal 0 0 New Tool Tip Position and/or Orientation of Tool to calibrate: Pos: 8 Qt::AlignCenter Rot: 8 Qt::AlignCenter false 3: Set New Tool Tip Position and/or Tool Orientation Qt::Vertical 20 40 Number of pivot poses to collect: 10 1000 100 Number of saved poses: 0 Qt::Horizontal 40 20 Collect Pivot Poses Calibration Result: Qt::Horizontal 40 20 175 0 Compute Pivot Point Qt::Horizontal 40 20 false 0 0 175 0 Use Computed Pivot Point Qt::Vertical 20 99 Tool Landmark Calibration <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0//EN" "http://www.w3.org/TR/REC-html40/strict.dtd"> <html><head><meta name="qrichtext" content="1" /><style type="text/css"> p, li { white-space: pre-wrap; } </style></head><body style=" font-family:'MS Shell Dlg 2'; font-size:7.8pt; font-weight:400; font-style:normal;"> <p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;"><span style=" font-size:8pt; text-decoration: underline;">Calibrate tool by marking the landmarks with the pointer</span></p></body></html> Tool landmarks 0 170 Add Pointer Position Control points for registration Qt::Vertical 20 259 Tool Axis Calibration QLayout::SetDefaultConstraint Tool axis: Get Positions Calibrate Tool Axis 4 -1000.000000000000000 1000.000000000000000 4 -1000.000000000000000 1000.000000000000000 4 -1000.000000000000000 1000.000000000000000 Calibrate the tool axis: 1. Make sure, tool tips of both tools are calibrated 2. Hold pointer at the end of the needle 3. Get Position 4. Calibrate tool axis Alternative: Manually edit the axis using the spinboxes. Qt::Vertical 20 497 - verticalSpacer_5 Qt::Horizontal 40 20 Save Calibrated Navigation Tool + + + + Qt::Vertical + + + + 20 + 40 + + + + tabWidget label groupBox groupBox_2 + verticalSpacer_6 - QmitkPointListWidget + QmitkToolTrackingStatusWidget QWidget -
QmitkPointListWidget.h
+
QmitkToolTrackingStatusWidget.h
1
- QmitkNavigationDataSourceSelectionWidget + QmitkPointListWidget QWidget -
QmitkNavigationDataSourceSelectionWidget.h
+
QmitkPointListWidget.h
1
- QmitkToolTrackingStatusWidget + QmitkNavigationDataSourceSelectionWidget QWidget -
QmitkToolTrackingStatusWidget.h
+
QmitkNavigationDataSourceSelectionWidget.h
1
diff --git a/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkMITKIGTTrackingToolboxViewControls.ui b/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkMITKIGTTrackingToolboxViewControls.ui index 3dfa24914b..864a7b13ee 100644 --- a/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkMITKIGTTrackingToolboxViewControls.ui +++ b/Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkMITKIGTTrackingToolboxViewControls.ui @@ -1,928 +1,954 @@ QmitkMITKIGTTrackingToolboxViewControls 0 0 849 701 0 0 QmitkTemplate - 1 + 0 Tracking QFrame::NoFrame QFrame::Raised 0 0 QFrame::NoFrame QFrame::Raised 10 75 true true Tracking Tools Qt::AlignLeading|Qt::AlignLeft|Qt::AlignTop 0 0 ToolStorage: <none> Qt::Horizontal 40 20 0 0 Qt::Horizontal 13 49 120 0 Auto Detection 120 0 Add Single Tool 120 0 Load Tool Storage 120 0 Reset QFrame::NoFrame QFrame::Raised 10 75 true Tracking Control Qt::AlignLeading|Qt::AlignLeft|Qt::AlignTop Status: disconnected Qt::Horizontal 40 20 142 0 Connect Qt::Horizontal 40 20 142 0 Start Tracking Qt::Horizontal 40 20 <html><head/><body><p><span style=" color:#ff0000;">Tracking Frozen!</span></p></body></html> true 142 0 Freeze Tracking + + + + Qt::Vertical + + + + 20 + 40 + + + + Options - - - - Disable All Timers - - - - - - - true - - - <html><head/><body><p align="right"><span style=" color:#ff0000;">Rendering Disabled!</span></p></body></html> - - - Qt::AutoText - - - Update Rate Options Update Rate [per second] Qt::Horizontal 40 20 100 10 Use different Render and Log Update Rates false Render Update Rate [fps] Qt::Horizontal 40 20 false 0 100 10 false Log Update Rate [per second] Qt::Horizontal 40 20 false 1 120 10 60 + + + + Other Options + + + + + + Show Tool Quaternions + + + + + + + Simple UI + + + + + + + Caution, only for backward compatibility: + + + + + + + Inverse mode (Quaternions are stored inverse) + + + + + + Tracking Volume Options true Show Tracking Volume true Select Model: + + + + Tool Visualization Options + + + + + + true + + + Show Tool Projection + + + + + + + + + + false + + + Show Tool Axis + + + + + + Open IGT Link Enable Open IGT Link MicroService true Select Open IGT Link Data Format: TRANSFORM QTDATA TDATA POSITION - - - - Other Options + + + + Disable All Timers - - - - - Show Tool Quaternions - - - - - - - Simple UI - - - - - - - Caution, only for backward compatibility: - - - - - - - Inverse mode (Quaternions are stored inverse) - - - - - - - - Tool Visualization Options + + + + true + + + <html><head/><body><p align="right"><span style=" color:#ff0000;">Rendering Disabled!</span></p></body></html> + + + Qt::AutoText - - - - - true - - - Show Tool Projection - - - - - - - - - - false - - - Show Tool Axis - - - - + + + + Qt::Vertical + + + + 20 + 40 + + + + Logging Filename: Choose File Limit Number Of Logged Frames: Qt::Horizontal 40 20 1 9999 300 CSV format true XML format Skip invalid data Logging Status Logging OFF Logged Frames: 0 Qt::Horizontal 40 20 Start Logging Stop Logging Qt::Vertical 20 40 9 742 303 70 70 50 Connect 70 50 Start Tracking Qt::Horizontal 40 20 70 50 Advanced Mode QmitkToolTrackingStatusWidget QWidget -
QmitkToolTrackingStatusWidget.h
+
QmitkToolTrackingStatusWidget.h
1
QmitkTrackingDeviceConfigurationWidget QWidget
QmitkTrackingDeviceConfigurationWidget.h
1
QmitkNavigationToolCreationWidget QWidget
QmitkNavigationToolCreationWidget.h
1
diff --git a/Plugins/org.mitk.gui.qt.ultrasound/src/internal/QmitkUltrasoundSupport.cpp b/Plugins/org.mitk.gui.qt.ultrasound/src/internal/QmitkUltrasoundSupport.cpp index bf687669d9..76c005d152 100644 --- a/Plugins/org.mitk.gui.qt.ultrasound/src/internal/QmitkUltrasoundSupport.cpp +++ b/Plugins/org.mitk.gui.qt.ultrasound/src/internal/QmitkUltrasoundSupport.cpp @@ -1,533 +1,533 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ // Blueberry #include #include //Mitk #include #include #include #include #include // Qmitk #include "QmitkUltrasoundSupport.h" // Qt #include #include #include // Ultrasound #include "mitkUSDevice.h" #include "QmitkUSAbstractCustomWidget.h" #include #include #include "usServiceReference.h" #include "internal/org_mitk_gui_qt_ultrasound_Activator.h" const std::string QmitkUltrasoundSupport::VIEW_ID = "org.mitk.views.ultrasoundsupport"; QmitkUltrasoundSupport::QmitkUltrasoundSupport() : m_Controls(nullptr), m_ControlCustomWidget(0), m_ControlBModeWidget(0), m_ControlProbesWidget(0), m_ImageAlreadySetToNode(false), m_CurrentImageWidth(0), m_CurrentImageHeight(0) { ctkPluginContext* pluginContext = mitk::PluginActivator::GetContext(); if (pluginContext) { // to be notified about service event of an USDevice pluginContext->connectServiceListener(this, "OnDeviceServiceEvent", QString::fromStdString("(" + us::ServiceConstants::OBJECTCLASS() + "=" + us_service_interface_iid() + ")")); } } QmitkUltrasoundSupport::~QmitkUltrasoundSupport() { try { StoreUISettings(); StopTimers(); // Get all active devicesand deactivate them to prevent freeze std::vector devices = this->m_Controls->m_ActiveVideoDevices->GetAllServices(); for (size_t i = 0; i < devices.size(); i++) { mitk::USDevice::Pointer device = devices[i]; if (device.IsNotNull() && device->GetIsActive()) { device->Deactivate(); device->Disconnect(); } } } catch (std::exception &e) { MITK_ERROR << "Exception during call of destructor! Message: " << e.what(); } } void QmitkUltrasoundSupport::SetFocus() { } void QmitkUltrasoundSupport::CreateQtPartControl(QWidget *parent) { //initialize timers m_UpdateTimer = new QTimer(this); m_RenderingTimer2d = new QTimer(this); m_RenderingTimer3d = new QTimer(this); // build up qt view, unless already done if (!m_Controls) { // create GUI widgets from the Qt Designer's .ui file m_Controls = new Ui::UltrasoundSupportControls; // create GUI widgets from the Qt Designer's .ui file m_Controls->setupUi(parent); //load persistence data before connecting slots (so no slots are called in this phase...) LoadUISettings(); //connect signals and slots... connect(m_Controls->m_DeviceManagerWidget, SIGNAL(NewDeviceButtonClicked()), this, SLOT(OnClickedAddNewDevice())); // Change Widget Visibilities connect(m_Controls->m_DeviceManagerWidget, SIGNAL(NewDeviceButtonClicked()), this->m_Controls->m_NewVideoDeviceWidget, SLOT(CreateNewDevice())); // Init NewDeviceWidget connect(m_Controls->m_ActiveVideoDevices, SIGNAL(ServiceSelectionChanged(us::ServiceReferenceU)), this, SLOT(OnChangedActiveDevice())); - connect(m_Controls->m_RunImageTimer, SIGNAL(clicked()), this, SLOT(OnChangedActiveDevice())); - connect(m_Controls->m_ShowImageStream, SIGNAL(clicked()), this, SLOT(OnChangedActiveDevice())); + connect(m_Controls->m_RunImageTimer, SIGNAL(clicked()), this, SLOT(OnChangedActiveDevice())); + connect(m_Controls->m_ShowImageStream, SIGNAL(clicked()), this, SLOT(OnChangedActiveDevice())); connect(m_Controls->m_NewVideoDeviceWidget, SIGNAL(Finished()), this, SLOT(OnNewDeviceWidgetDone())); // After NewDeviceWidget finished editing connect(m_Controls->m_FrameRatePipeline, SIGNAL(valueChanged(int)), this, SLOT(OnChangedFramerateLimit())); connect(m_Controls->m_FrameRate2d, SIGNAL(valueChanged(int)), this, SLOT(OnChangedFramerateLimit())); connect(m_Controls->m_FrameRate3d, SIGNAL(valueChanged(int)), this, SLOT(OnChangedFramerateLimit())); connect(m_Controls->m_FreezeButton, SIGNAL(clicked()), this, SLOT(OnClickedFreezeButton())); connect(m_UpdateTimer, SIGNAL(timeout()), this, SLOT(UpdateImage())); connect(m_RenderingTimer2d, SIGNAL(timeout()), this, SLOT(RenderImage2d())); connect(m_RenderingTimer3d, SIGNAL(timeout()), this, SLOT(RenderImage3d())); connect(m_Controls->m_Update2DView, SIGNAL(clicked()), this, SLOT(StartTimers())); connect(m_Controls->m_Update3DView, SIGNAL(clicked()), this, SLOT(StartTimers())); connect(m_Controls->m_DeviceManagerWidget, SIGNAL(EditDeviceButtonClicked(mitk::USDevice::Pointer)), this, SLOT(OnClickedEditDevice())); //Change Widget Visibilities connect(m_Controls->m_DeviceManagerWidget, SIGNAL(EditDeviceButtonClicked(mitk::USDevice::Pointer)), this->m_Controls->m_NewVideoDeviceWidget, SLOT(EditDevice(mitk::USDevice::Pointer))); // Initializations m_Controls->m_NewVideoDeviceWidget->setVisible(false); std::string filter = "(&(" + us::ServiceConstants::OBJECTCLASS() + "=" + "org.mitk.services.UltrasoundDevice)(" + mitk::USDevice::GetPropertyKeys().US_PROPKEY_ISACTIVE + "=true))"; m_Controls->m_ActiveVideoDevices->Initialize( mitk::USDevice::GetPropertyKeys().US_PROPKEY_LABEL, filter); m_Controls->m_ActiveVideoDevices->SetAutomaticallySelectFirstEntry(true); m_FrameCounterPipeline = 0; m_FrameCounter2d = 0; m_FrameCounter3d = 0; m_Controls->tabWidget->setTabEnabled(1, false); } } void QmitkUltrasoundSupport::OnClickedAddNewDevice() { m_Controls->m_NewVideoDeviceWidget->setVisible(true); m_Controls->m_DeviceManagerWidget->setVisible(false); m_Controls->m_Headline->setText("Add New Video Device:"); m_Controls->m_WidgetActiveDevices->setVisible(false); } void QmitkUltrasoundSupport::OnClickedEditDevice() { m_Controls->m_NewVideoDeviceWidget->setVisible(true); m_Controls->m_DeviceManagerWidget->setVisible(false); m_Controls->m_WidgetActiveDevices->setVisible(false); m_Controls->m_Headline->setText("Edit Video Device:"); } void QmitkUltrasoundSupport::UpdateImage() { //Update device m_Device->Modified(); m_Device->Update(); //Only update the view if the image is shown if (m_Controls->m_ShowImageStream->isChecked()) { //Update data nodes for (size_t i = 0; i < m_AmountOfOutputs; i++) { mitk::Image::Pointer curOutput = m_Device->GetOutput(i); if (curOutput->IsEmpty()) { m_Node.at(i)->SetName("No Data received yet ..."); //create a noise image for correct initialization of level window, etc. mitk::Image::Pointer randomImage = mitk::ImageGenerator::GenerateRandomImage(32, 32, 1, 1, 1, 1, 1, 255, 0); m_Node.at(i)->SetData(randomImage); curOutput->SetGeometry(randomImage->GetGeometry()); } else { std::stringstream nodeName; nodeName << "US Viewing Stream - Image " << i; m_Node.at(i)->SetName(nodeName.str()); m_Node.at(i)->SetData(curOutput); m_Node.at(i)->Modified(); } // if the geometry changed: reinitialize the ultrasound image if ((i==0) && (m_OldGeometry.IsNotNull()) && (curOutput->GetGeometry() != NULL) && (!mitk::Equal(*(m_OldGeometry.GetPointer()), *(curOutput->GetGeometry()), 0.0001, false)) ) { mitk::IRenderWindowPart* renderWindow = this->GetRenderWindowPart(); if ((renderWindow != NULL) && (curOutput->GetTimeGeometry()->IsValid()) && (m_Controls->m_ShowImageStream->isChecked())) { renderWindow->GetRenderingManager()->InitializeViews( curOutput->GetGeometry(), mitk::RenderingManager::REQUEST_UPDATE_ALL, true); renderWindow->GetRenderingManager()->RequestUpdateAll(); } m_CurrentImageWidth = curOutput->GetDimension(0); m_CurrentImageHeight = curOutput->GetDimension(1); m_OldGeometry = dynamic_cast(curOutput->GetGeometry()); } } } //Update frame counter m_FrameCounterPipeline++; if (m_FrameCounterPipeline >0) { //compute framerate of pipeline update int nMilliseconds = m_Clock.restart(); int fps = 1000.0 / nMilliseconds; m_FPSPipeline = fps; m_FrameCounterPipeline = 0; //display lowest framerate in UI int lowestFPS = m_FPSPipeline; if (m_Controls->m_Update2DView->isChecked() && (m_FPS2d < lowestFPS)) { lowestFPS = m_FPS2d; } if (m_Controls->m_Update3DView->isChecked() && (m_FPS3d < lowestFPS)) { lowestFPS = m_FPS3d; } m_Controls->m_FramerateLabel->setText("Current Framerate: " + QString::number(lowestFPS) + " FPS"); } } void QmitkUltrasoundSupport::RenderImage2d() { if (!m_Controls->m_Update2DView->isChecked()) return; this->RequestRenderWindowUpdate(mitk::RenderingManager::REQUEST_UPDATE_2DWINDOWS); m_FrameCounter2d++; if (m_FrameCounter2d >0) { //compute framerate of 2d render window update int nMilliseconds = m_Clock2d.restart(); int fps = 1000.0f / (nMilliseconds); m_FPS2d = fps; m_FrameCounter2d = 0; } } void QmitkUltrasoundSupport::RenderImage3d() { if (!m_Controls->m_Update3DView->isChecked()) return; this->RequestRenderWindowUpdate(mitk::RenderingManager::REQUEST_UPDATE_3DWINDOWS); m_FrameCounter3d++; if (m_FrameCounter3d >0) { //compute framerate of 2d render window update int nMilliseconds = m_Clock3d.restart(); int fps = 1000.0f / (nMilliseconds); m_FPS3d = fps; m_FrameCounter3d = 0; } } void QmitkUltrasoundSupport::OnChangedFramerateLimit() { StopTimers(); int intervalPipeline = (1000 / m_Controls->m_FrameRatePipeline->value()); int interval2D = (1000 / m_Controls->m_FrameRate2d->value()); int interval3D = (1000 / m_Controls->m_FrameRate3d->value()); SetTimerIntervals(intervalPipeline, interval2D, interval3D); StartTimers(); } void QmitkUltrasoundSupport::OnClickedFreezeButton() { if (m_Device.IsNull()) { MITK_WARN("UltrasoundSupport") << "Freeze button clicked though no device is selected."; return; } if (m_Device->GetIsFreezed()) { m_Device->SetIsFreezed(false); m_Controls->m_FreezeButton->setText("Freeze"); } else { m_Device->SetIsFreezed(true); m_Controls->m_FreezeButton->setText("Start Viewing Again"); } } void QmitkUltrasoundSupport::OnChangedActiveDevice() { if (m_Controls->m_RunImageTimer->isChecked() == FALSE) { StopTimers(); return; } //clean up and stop timer StopTimers(); this->RemoveControlWidgets(); for (size_t j = 0; j < m_Node.size(); j++) { this->GetDataStorage()->Remove(m_Node.at(j)); m_Node.at(j)->ReleaseData(); } m_Node.clear(); //get current device, abort if it is invalid m_Device = m_Controls->m_ActiveVideoDevices->GetSelectedService(); if (m_Device.IsNull()) { m_Controls->tabWidget->setTabEnabled(1, false); return; } m_AmountOfOutputs = m_Device->GetNumberOfIndexedOutputs(); // clear data storage, create new nodes and add for (size_t i = 0; i < m_AmountOfOutputs; i++) { mitk::DataNode::Pointer currentNode = mitk::DataNode::New(); std::stringstream nodeName; nodeName << "US Viewing Stream - Image " << i; currentNode->SetName(nodeName.str()); //create a dummy image (gray values 0..255) for correct initialization of level window, etc. mitk::Image::Pointer dummyImage = mitk::ImageGenerator::GenerateRandomImage(100, 100, 1, 1, 1, 1, 1, 255, 0); currentNode->SetData(dummyImage); m_OldGeometry = dynamic_cast(dummyImage->GetGeometry()); m_Node.push_back(currentNode); //show node if the option is enabled if (m_Controls->m_ShowImageStream->isChecked()) { this->GetDataStorage()->Add(m_Node.at(i)); } } //create the widgets for this device and enable the widget tab this->CreateControlWidgets(); m_Controls->tabWidget->setTabEnabled(1, true); //start timer if (m_Controls->m_RunImageTimer->isChecked()) { int intervalPipeline = (1000 / m_Controls->m_FrameRatePipeline->value()); int interval2D = (1000 / m_Controls->m_FrameRate2d->value()); int interval3D = (1000 / m_Controls->m_FrameRate3d->value()); SetTimerIntervals(intervalPipeline, interval2D, interval3D); StartTimers(); m_Controls->m_TimerWidget->setEnabled(true); } else { m_Controls->m_TimerWidget->setEnabled(false); } } void QmitkUltrasoundSupport::OnNewDeviceWidgetDone() { m_Controls->m_NewVideoDeviceWidget->setVisible(false); m_Controls->m_DeviceManagerWidget->setVisible(true); m_Controls->m_Headline->setText("Ultrasound Devices:"); m_Controls->m_WidgetActiveDevices->setVisible(true); } void QmitkUltrasoundSupport::CreateControlWidgets() { m_ControlProbesWidget = new QmitkUSControlsProbesWidget(m_Device->GetControlInterfaceProbes(), m_Controls->m_ToolBoxControlWidgets); m_Controls->probesWidgetContainer->addWidget(m_ControlProbesWidget); // create b mode widget for current device m_ControlBModeWidget = new QmitkUSControlsBModeWidget(m_Device->GetControlInterfaceBMode(), m_Controls->m_ToolBoxControlWidgets); m_Controls->m_ToolBoxControlWidgets->addItem(m_ControlBModeWidget, "B Mode Controls"); if (!m_Device->GetControlInterfaceBMode()) { m_Controls->m_ToolBoxControlWidgets->setItemEnabled(m_Controls->m_ToolBoxControlWidgets->count() - 1, false); } // create doppler widget for current device m_ControlDopplerWidget = new QmitkUSControlsDopplerWidget(m_Device->GetControlInterfaceDoppler(), m_Controls->m_ToolBoxControlWidgets); m_Controls->m_ToolBoxControlWidgets->addItem(m_ControlDopplerWidget, "Doppler Controls"); if (!m_Device->GetControlInterfaceDoppler()) { m_Controls->m_ToolBoxControlWidgets->setItemEnabled(m_Controls->m_ToolBoxControlWidgets->count() - 1, false); } ctkPluginContext* pluginContext = mitk::PluginActivator::GetContext(); if (pluginContext) { std::string filter = "(org.mitk.services.UltrasoundCustomWidget.deviceClass=" + m_Device->GetDeviceClass() + ")"; QString interfaceName = QString::fromStdString(us_service_interface_iid()); m_CustomWidgetServiceReference = pluginContext->getServiceReferences(interfaceName, QString::fromStdString(filter)); if (m_CustomWidgetServiceReference.size() > 0) { m_ControlCustomWidget = pluginContext->getService (m_CustomWidgetServiceReference.at(0))->CloneForQt(m_Controls->tab2); m_ControlCustomWidget->SetDevice(m_Device); m_Controls->m_ToolBoxControlWidgets->addItem(m_ControlCustomWidget, "Custom Controls"); } else { m_Controls->m_ToolBoxControlWidgets->addItem(new QWidget(m_Controls->m_ToolBoxControlWidgets), "Custom Controls"); m_Controls->m_ToolBoxControlWidgets->setItemEnabled(m_Controls->m_ToolBoxControlWidgets->count() - 1, false); } } // select first enabled control widget for (int n = 0; n < m_Controls->m_ToolBoxControlWidgets->count(); ++n) { if (m_Controls->m_ToolBoxControlWidgets->isItemEnabled(n)) { m_Controls->m_ToolBoxControlWidgets->setCurrentIndex(n); break; } } } void QmitkUltrasoundSupport::RemoveControlWidgets() { if (!m_ControlProbesWidget) { return; } //widgets do not exist... nothing to do // remove all control widgets from the tool box widget while (m_Controls->m_ToolBoxControlWidgets->count() > 0) { m_Controls->m_ToolBoxControlWidgets->removeItem(0); } // remove probes widget (which is not part of the tool box widget) m_Controls->probesWidgetContainer->removeWidget(m_ControlProbesWidget); delete m_ControlProbesWidget; m_ControlProbesWidget = 0; delete m_ControlBModeWidget; m_ControlBModeWidget = 0; delete m_ControlDopplerWidget; m_ControlDopplerWidget = 0; // delete custom widget if it is present if (m_ControlCustomWidget) { ctkPluginContext* pluginContext = mitk::PluginActivator::GetContext(); delete m_ControlCustomWidget; m_ControlCustomWidget = 0; if (m_CustomWidgetServiceReference.size() > 0) { pluginContext->ungetService(m_CustomWidgetServiceReference.at(0)); } } } void QmitkUltrasoundSupport::OnDeviceServiceEvent(const ctkServiceEvent event) { if (m_Device.IsNull() || event.getType() != ctkServiceEvent::MODIFIED) { return; } ctkServiceReference service = event.getServiceReference(); if (m_Device->GetManufacturer() != service.getProperty(QString::fromStdString(mitk::USDevice::GetPropertyKeys().US_PROPKEY_MANUFACTURER)).toString().toStdString() && m_Device->GetName() != service.getProperty(QString::fromStdString(mitk::USDevice::GetPropertyKeys().US_PROPKEY_NAME)).toString().toStdString()) { return; } if (!m_Device->GetIsActive() && m_UpdateTimer->isActive()) { StopTimers(); } if (m_CurrentDynamicRange != service.getProperty(QString::fromStdString(mitk::USDevice::GetPropertyKeys().US_PROPKEY_BMODE_DYNAMIC_RANGE)).toDouble()) { m_CurrentDynamicRange = service.getProperty(QString::fromStdString(mitk::USDevice::GetPropertyKeys().US_PROPKEY_BMODE_DYNAMIC_RANGE)).toDouble(); // update level window for the current dynamic range mitk::LevelWindow levelWindow; m_Node.at(0)->GetLevelWindow(levelWindow); levelWindow.SetAuto(m_curOutput.at(0), true, true); m_Node.at(0)->SetLevelWindow(levelWindow); } } void QmitkUltrasoundSupport::StoreUISettings() { QSettings settings; settings.beginGroup(QString::fromStdString(VIEW_ID)); settings.setValue("DisplayImage", QVariant(m_Controls->m_ShowImageStream->isChecked())); settings.setValue("RunImageTimer", QVariant(m_Controls->m_RunImageTimer->isChecked())); settings.setValue("Update2DView", QVariant(m_Controls->m_Update2DView->isChecked())); settings.setValue("Update3DView", QVariant(m_Controls->m_Update3DView->isChecked())); settings.setValue("UpdateRatePipeline", QVariant(m_Controls->m_FrameRatePipeline->value())); settings.setValue("UpdateRate2d", QVariant(m_Controls->m_FrameRate2d->value())); settings.setValue("UpdateRate3d", QVariant(m_Controls->m_FrameRate3d->value())); settings.endGroup(); } void QmitkUltrasoundSupport::LoadUISettings() { QSettings settings; settings.beginGroup(QString::fromStdString(VIEW_ID)); m_Controls->m_ShowImageStream->setChecked(settings.value("DisplayImage", true).toBool()); m_Controls->m_RunImageTimer->setChecked(settings.value("RunImageTimer", true).toBool()); m_Controls->m_Update2DView->setChecked(settings.value("Update2DView", true).toBool()); m_Controls->m_Update3DView->setChecked(settings.value("Update3DView", true).toBool()); m_Controls->m_FrameRatePipeline->setValue(settings.value("UpdateRatePipeline", 50).toInt()); m_Controls->m_FrameRate2d->setValue(settings.value("UpdateRate2d", 20).toInt()); m_Controls->m_FrameRate3d->setValue(settings.value("UpdateRate3d", 5).toInt()); settings.endGroup(); } void QmitkUltrasoundSupport::StartTimers() { m_Clock.start(); m_UpdateTimer->start(); if (m_Controls->m_Update2DView->isChecked()) { m_RenderingTimer2d->start(); } if (m_Controls->m_Update3DView->isChecked()) { m_RenderingTimer3d->start(); } } void QmitkUltrasoundSupport::StopTimers() { m_UpdateTimer->stop(); m_RenderingTimer2d->stop(); m_RenderingTimer3d->stop(); } void QmitkUltrasoundSupport::SetTimerIntervals(int intervalPipeline, int interval2D, int interval3D) { m_UpdateTimer->setInterval(intervalPipeline); m_RenderingTimer2d->setInterval(interval2D); m_RenderingTimer3d->setInterval(interval3D); }