Diffusion MITK d456a718ba87

Removed code dependency to DicomSeriesReader
d456a718ba87
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Description

Removed code dependency to DicomSeriesReader

Summary:
Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Removed obsolete includes/usage of DicomSeriesReader

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Remove DicomSeriesReaderService

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Fixed diffusion mime types

Checked if NRRD io can read files before calling ReadImageInformation().
Otherwise this will cause errors when checking invalid files.
The error became evident after removal of the depricated DicomSeriesReaderService.

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Remove obsolete DataNodeFactory

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Remove Diffusion Dicom2Nrrd mini app

Reason: Used old depricated loading mechanisms and was functionally
a subset of the Dicom2Nrrd mini app found in classification (the later will
be moved to the DICOM module).

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

Removed DicomSeriesReader tests

Signed-off-by: Ralf Floca <r.floca@dkfz-heidelberg.de>

(almost) Removed DicomSeriesReader!!! *FINALLY*

Moved the DicomSeriesReader as a private legacy asset to
DICOMReader.
Reason: See description of T24540. So we need it for one last use case,
but want to keep the code as private as possible.

Removed code dependency to DicomSeriesReaderd456a718ba87Actions

Description

Details

Event Timeline

Changes (62)

rMITKd456a718ba87

Examples/Plugins/org.mitk.example.gui.customviewer.views/src/internal/DicomView.cpp

Modules/CEST/autoload/IO/mitkCESTDICOMReaderService.h

Modules/Classification/CLMiniApps/CLDicom2Nrrd.cpp

Modules/Classification/CLMiniApps/CLLungSegmentation.cpp

Modules/Classification/CLMiniApps/CLMatchPointReg.cpp

Modules/Classification/CLMiniApps/XRaxSimulationFromCT.cpp

Modules/Classification/DataCollection/Testing/mitKnnClassificationTest.cpp

Modules/Classification/DataCollection/Testing/mitkGenerateFeatureVectFromImageTest.cpp

Modules/Core/CMakeLists.txt

Modules/Core/files.cmake

Modules/Core/include/mitkDicomSeriesReader.h

Modules/Core/include/mitkDicomSeriesReader.txx

Modules/Core/include/mitkIDataNodeReader.h

Modules/Core/include/mitkImageVtkMapper2D.h

Modules/Core/src/IO/mitkDicomSR_GantryTiltInformation.cpp

Modules/Core/src/IO/mitkDicomSR_ImageBlockDescriptor.cpp

Modules/Core/src/IO/mitkDicomSR_LoadDICOMRGBPixel.cpp

Modules/Core/src/IO/mitkDicomSR_LoadDICOMRGBPixel4D.cpp

Modules/Core/src/IO/mitkDicomSR_LoadDICOMScalar.cpp

Modules/Core/src/IO/mitkDicomSR_LoadDICOMScalar4D.cpp

Modules/Core/src/IO/mitkDicomSR_SliceGroupingResult.cpp

Modules/Core/src/IO/mitkDicomSeriesReader.cpp

Modules/Core/src/IO/mitkDicomSeriesReaderService.cpp

Modules/Core/src/IO/mitkDicomSeriesReaderService.h

Modules/Core/src/IO/mitkIOUtil.cpp

Modules/Core/src/IO/mitkLegacyFileReaderService.cpp

Modules/Core/src/mitkCoreActivator.cpp

Modules/Core/test/CMakeLists.txt

Modules/Core/test/files.cmake

Modules/Core/test/mitkDICOMLocaleTest.cpp

Modules/Core/test/mitkDicomSeriesReaderTest.cpp

Modules/DICOMReader/CMakeLists.txt

Modules/DICOMReader/files.cmake

Modules/DICOMReader/src/legacy/mitkDicomSR_GantryTiltInformation.cpp

Modules/DICOMReader/src/legacy/mitkDicomSR_ImageBlockDescriptor.cpp

Modules/DICOMReader/src/legacy/mitkDicomSR_LoadDICOMRGBPixel.cpp

Modules/DICOMReader/src/legacy/mitkDicomSR_LoadDICOMRGBPixel4D.cpp

Modules/DICOMReader/src/legacy/mitkDicomSR_LoadDICOMScalar.cpp

Modules/DICOMReader/src/legacy/mitkDicomSR_LoadDICOMScalar4D.cpp

Modules/DICOMReader/src/legacy/mitkDicomSR_SliceGroupingResult.cpp

Modules/DICOMReader/src/legacy/mitkDicomSeriesReader.cpp

Modules/DICOMReader/src/legacy/mitkDicomSeriesReader.h

Modules/DICOMReader/src/legacy/mitkDicomSeriesReader.txx

Modules/DICOMReader/src/mitkBaseDICOMReaderService.cpp

Modules/DICOMTesting/test/mitkDICOMLocaleTest.cpp

Modules/DataTypesExt/src/mitkOrganTypeProperty.cpp

Modules/DicomRT/include/mitkDoseImageVtkMapper2D.h

Modules/DiffusionImaging/DiffusionCore/autoload/IO/mitkDiffusionCoreIOMimeTypes.cpp

Modules/DiffusionImaging/DiffusionCore/autoload/IO/mitkDiffusionImageDicomReaderService.cpp

Modules/DiffusionImaging/DiffusionCore/cmdapps/CMakeLists.txt

Modules/DiffusionImaging/DiffusionCore/cmdapps/Dicom2Nrrd.cpp

Modules/ImageExtraction/Testing/mitkExtractImageFilterTest.cpp

Modules/LegacyIO/Testing

Modules/LegacyIO/Testing/files.cmake

Modules/LegacyIO/Testing/mitkDataNodeFactoryTest.cpp

Modules/LegacyIO/files.cmake

Modules/LegacyIO/mitkDataNodeFactory.cpp

Modules/LegacyIO/mitkDataNodeFactory.h

Plugins/org.mitk.gui.common/src/mitkWorkbenchUtil.h

Plugins/org.mitk.gui.qt.dicom/src/internal/DicomEventHandler.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/deprecated/QmitkDiffusionTensorEstimation.cpp

Removed code dependency to DicomSeriesReader
d456a718ba87
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