diff --git a/Plugins/org.mitk.gui.qt.pharmacokinetics.concentration.mri/documentation/UserManual/Manual.dox b/Plugins/org.mitk.gui.qt.pharmacokinetics.concentration.mri/documentation/UserManual/Manual.dox index f6d7d075e8..8ebcec4c99 100644 --- a/Plugins/org.mitk.gui.qt.pharmacokinetics.concentration.mri/documentation/UserManual/Manual.dox +++ b/Plugins/org.mitk.gui.qt.pharmacokinetics.concentration.mri/documentation/UserManual/Manual.dox @@ -1,31 +1,31 @@ /** \page org_mitk_views_pharmacokinetics_concentration_mri The DCE Concentration Curve Converter View -\imageMacro{pharmacokinetics_concentration_doc.svg,"Icon of the Concentration Curve Converter View",3.0} +\imageMacro{pharmacokinetics_concentration_doc.svg,"Icon of the DCE Concentration Curve Converter View",3.0} \tableofcontents \section org_mitk_views_pharmacokinetics_concentration_mri_overview Overview This view offers a dedicated tool for the conversion of DCE MR image signal intensities to contrast agent (CA) concentration. It contains a subset of the conversion tools for T1-weighted signal intensities, which are a part of the DCE MR Perfusion Datafit View (see \ref FIT_DCE_Settings_concentration). Additionally, it allows for conversion between T2-weighted MR signal intensities and contrast agent concentration. \section org_mitk_views_pharmacokinetics_concentration_mri_Contact Contact information If you have any questions, need support, find a bug or have a feature request, feel free to contact us at www.mitk.org. \section org_mitk_views_pharmacokinetics_concentration_mri_T1_conversion Conversion of T1-weighted MRI data \imageMacro{concentration_curve_converter_T1_weighted4D.png,"Example screenshot of the conversion of T1-weighted MR images",3.0} The view offers the options to chose between a <i>3D Image</i> and a <i>4D image</i>. If a 4D image is selected, the <i>Selected Time Series</i> needs to be selected from the Data Manager. In this case, the baseline image is automatically extracted as the first time point image of the time series. In case of a 3D image to be converted, additionally to the selected 3D image a <i>Baseline Image (without CA)</i> has to be specified.\n\n In the configuration section, the following types of conversion can be chosen: - <i>Absolute Signal Enhancement</i>: The contrast agent concentration c is calculated according to the formula: c = k*S(t)-S(0), where S(t) is the dynamic signal intensity, S(0) the baseline signal and k a user-defined conversion factor. - <i>Relative Signal Enhancement</i>: The contrast agent concentration c is calculated according to the formula: c = k*(S(t)-S(0))/S(0), where S(t) is the dynamic signal intensity, S(0) the baseline signal and k a user-defined conversion factor. - <i>Turbo Flash Sequence</i>: The conversion from signal S(t) to contrast agent concentration c is calculated according to the turbo FLASH sequence specific formula: \section org_mitk_views_pharmacokinetics_concentration_mri_T2_conversion Conversion of T2-weighted MRI data */