diff --git a/Modules/SemanticRelationsUI/include/QmitkPatientTableInspector.h b/Modules/SemanticRelationsUI/include/QmitkPatientTableInspector.h index 1095851a41..eae348e7aa 100644 --- a/Modules/SemanticRelationsUI/include/QmitkPatientTableInspector.h +++ b/Modules/SemanticRelationsUI/include/QmitkPatientTableInspector.h @@ -1,86 +1,89 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef QMITKPATIENTTABLEINSPECTOR_H #define QMITKPATIENTTABLEINSPECTOR_H // semantic relations UI module #include "MitkSemanticRelationsUIExports.h" #include #include #include "ui_QmitkPatientTableInspector.h" // qt widgets module #include "QmitkEnums.h" // qt #include /* * @brief The QmitkPatientTableInspector is a QmitkAbstractSemanticRelationsStorageInspector that shows the currently * available data of the semantic relations storage model in a control-point - information type matrix. * * The QmitkPatientTableInspector uses the QmitkSemanticRelationsStorageModel, a QmitkAbstractDataStorageModel that * presents the semantic relations data as a table, showing a QPixmap as thumbnail for the data nodes. */ class MITKSEMANTICRELATIONSUI_EXPORT QmitkPatientTableInspector : public QmitkAbstractSemanticRelationsStorageInspector { Q_OBJECT public: QmitkPatientTableInspector(QWidget* parent = nullptr); virtual QAbstractItemView* GetView() override; virtual const QAbstractItemView* GetView() const override; virtual void SetSelectionMode(SelectionMode mode) override; virtual SelectionMode GetSelectionMode() const override; virtual void SetCaseID(const mitk::SemanticTypes::CaseID& caseID) override; virtual void SetLesion(const mitk::SemanticTypes::Lesion& lesion) override; QItemSelectionModel* GetSelectionModel(); Q_SIGNALS: - void DataNodeDoubleClicked(const mitk::DataNode::Pointer); + void DataNodeDoubleClicked(const mitk::DataNode*); void OnContextMenuRequested(const QPoint&); + void OnNodeRemoved(const mitk::DataNode*); private Q_SLOTS: void OnModelUpdated(); void OnNodeButtonClicked(const QString&); void OnContextMenuSetControlPoint(); void OnItemDoubleClicked(const QModelIndex&); protected: virtual void Initialize() override; private: void SetUpConnections(); + virtual void keyPressEvent(QKeyEvent* e) override; + Ui::QmitkPatientTableInspector m_Controls; QmitkPatientTableModel* m_StorageModel; mitk::DataNode* m_SelectedDataNode; }; #endif // QMITKPATIENTTABLEINSPECTOR_H diff --git a/Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.cpp b/Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.cpp index 1f3b9720a9..b61b5b617b 100644 --- a/Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.cpp +++ b/Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.cpp @@ -1,235 +1,265 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ // semantic relations UI module #include "QmitkPatientTableInspector.h" #include "QmitkControlPointDialog.h" // mitk qt widgets module #include "QmitkCustomVariants.h" #include "QmitkEnums.h" // semantic relations module #include #include #include // qt +#include #include QmitkPatientTableInspector::QmitkPatientTableInspector(QWidget* parent/* =nullptr*/) { m_Controls.setupUi(this); m_Controls.tableView->horizontalHeader()->setHighlightSections(false); m_Controls.tableView->verticalHeader()->setHighlightSections(false); m_Controls.tableView->setSelectionMode(QAbstractItemView::SingleSelection); m_Controls.tableView->setSelectionBehavior(QAbstractItemView::SelectItems); m_Controls.tableView->setContextMenuPolicy(Qt::CustomContextMenu); m_StorageModel = new QmitkPatientTableModel(this); m_Controls.tableView->setModel(m_StorageModel); SetUpConnections(); } QAbstractItemView* QmitkPatientTableInspector::GetView() { return m_Controls.tableView; } const QAbstractItemView* QmitkPatientTableInspector::GetView() const { return m_Controls.tableView; } void QmitkPatientTableInspector::SetSelectionMode(SelectionMode mode) { m_Controls.tableView->setSelectionMode(mode); } QmitkPatientTableInspector::SelectionMode QmitkPatientTableInspector::GetSelectionMode() const { return m_Controls.tableView->selectionMode(); } void QmitkPatientTableInspector::SetCaseID(const mitk::SemanticTypes::CaseID& caseID) { m_StorageModel->SetCaseID(caseID); } void QmitkPatientTableInspector::SetLesion(const mitk::SemanticTypes::Lesion& lesion) { m_StorageModel->SetLesion(lesion); } QItemSelectionModel* QmitkPatientTableInspector::GetSelectionModel() { return m_Controls.tableView->selectionModel(); } void QmitkPatientTableInspector::Initialize() { m_StorageModel->SetDataStorage(m_DataStorage.Lock()); m_StorageModel->SetNodePredicate(m_NodePredicate); m_Connector->SetView(m_Controls.tableView); } void QmitkPatientTableInspector::OnModelUpdated() { m_Controls.tableView->resizeRowsToContents(); m_Controls.tableView->resizeColumnsToContents(); } void QmitkPatientTableInspector::OnNodeButtonClicked(const QString& nodeType) { m_StorageModel->SetNodeType(nodeType.toStdString()); } void QmitkPatientTableInspector::OnContextMenuSetControlPoint() { QmitkControlPointDialog* inputDialog = new QmitkControlPointDialog(m_Controls.tableView); inputDialog->setWindowTitle("Set control point"); inputDialog->SetCurrentDate(mitk::GetDICOMDateFromDataNode(m_SelectedDataNode)); int dialogReturnValue = inputDialog->exec(); if (QDialog::Rejected == dialogReturnValue) { return; } // store the current control point to relink it, if anything goes wrong mitk::SemanticTypes::ControlPoint originalControlPoint = m_StorageModel->GetSemanticRelations()->GetControlPointOfData(m_SelectedDataNode); // unlink the data, that is about to receive a new date // this is needed in order to not extend a single control point, to which the selected node is currently linked m_StorageModel->GetSemanticRelations()->UnlinkDataFromControlPoint(m_SelectedDataNode); const QDate& userSelectedDate = inputDialog->GetCurrentDate(); mitk::SemanticTypes::Date date; date.UID = mitk::UIDGeneratorBoost::GenerateUID(); date.year = userSelectedDate.year(); date.month = userSelectedDate.month(); date.day = userSelectedDate.day(); std::vector allControlPoints = m_StorageModel->GetSemanticRelations()->GetAllControlPointsOfCase(m_StorageModel->GetCaseID()); if (!allControlPoints.empty()) { // need to check if an already existing control point fits/contains the user control point mitk::SemanticTypes::ControlPoint fittingControlPoint = mitk::FindFittingControlPoint(date, allControlPoints); if (!fittingControlPoint.UID.empty()) { try { // found a fitting control point m_StorageModel->GetSemanticRelations()->LinkDataToControlPoint(m_SelectedDataNode, fittingControlPoint, false); m_StorageModel->UpdateModelData(); } catch (const mitk::SemanticRelationException&) { MITK_INFO << "The data can not be linked to the fitting control point."; try { // link to the original control point m_StorageModel->GetSemanticRelations()->LinkDataToControlPoint(m_SelectedDataNode, originalControlPoint, false); } catch (const mitk::SemanticRelationException&) { MITK_INFO << "The data can not be linked to its original control point. Inconsistency in the semantic relations storage assumed."; } } return; } // did not find a fitting control point, although some control points already exist // need to check if a close control point can be found and extended mitk::SemanticTypes::ControlPoint extendedControlPoint = mitk::ExtendClosestControlPoint(date, allControlPoints); if (!extendedControlPoint.UID.empty()) { try { // found and extended a close control point m_StorageModel->GetSemanticRelations()->OverwriteControlPointAndLinkData(m_SelectedDataNode, extendedControlPoint, false); m_StorageModel->UpdateModelData(); } catch (const mitk::SemanticRelationException&) { MITK_INFO << "The extended control point can not be overwritten and the data can not be linked to this control point."; try { // link to the original control point m_StorageModel->GetSemanticRelations()->LinkDataToControlPoint(m_SelectedDataNode, originalControlPoint, false); } catch (const mitk::SemanticRelationException&) { MITK_INFO << "The data can not be linked to its original control point. Inconsistency in the semantic relations storage assumed."; } } return; } } // generate a control point from the user-given date mitk::SemanticTypes::ControlPoint controlPointFromUserDate = mitk::GenerateControlPoint(date); try { m_StorageModel->GetSemanticRelations()->AddControlPointAndLinkData(m_SelectedDataNode, controlPointFromUserDate, false); m_StorageModel->UpdateModelData(); } catch (const mitk::SemanticRelationException&) { MITK_INFO << "The control point can not be added and the data can not be linked to this control point."; try { // link to the original control point m_StorageModel->GetSemanticRelations()->LinkDataToControlPoint(m_SelectedDataNode, originalControlPoint, false); } catch (const mitk::SemanticRelationException&) { MITK_INFO << "The data can not be linked to its original control point. Inconsistency in the semantic relations storage assumed."; } } } void QmitkPatientTableInspector::OnItemDoubleClicked(const QModelIndex& itemIndex) { if (itemIndex.isValid()) { - QVariant qvariantDataNode = m_StorageModel->data(itemIndex, QmitkDataNodeRole); - if (qvariantDataNode.canConvert()) + QVariant qvariantDataNode = m_StorageModel->data(itemIndex, QmitkDataNodeRawPointerRole); + if (qvariantDataNode.canConvert()) { - mitk::DataNode::Pointer dataNode = qvariantDataNode.value(); + mitk::DataNode* dataNode = qvariantDataNode.value(); emit DataNodeDoubleClicked(dataNode); } } } void QmitkPatientTableInspector::SetUpConnections() { connect(m_StorageModel, &QmitkPatientTableModel::ModelUpdated, this, &QmitkPatientTableInspector::OnModelUpdated); connect(m_Controls.tableView, &QTableView::customContextMenuRequested, this, &QmitkPatientTableInspector::OnContextMenuRequested); QSignalMapper* nodeButtonSignalMapper = new QSignalMapper(this); nodeButtonSignalMapper->setMapping(m_Controls.imageNodeButton, QString("Image")); nodeButtonSignalMapper->setMapping(m_Controls.segmentationNodeButton, QString("Segmentation")); connect(nodeButtonSignalMapper, static_cast(&QSignalMapper::mapped), this, &QmitkPatientTableInspector::OnNodeButtonClicked); connect(m_Controls.imageNodeButton, SIGNAL(clicked()), nodeButtonSignalMapper, SLOT(map())); connect(m_Controls.segmentationNodeButton, SIGNAL(clicked()), nodeButtonSignalMapper, SLOT(map())); m_Controls.imageNodeButton->setChecked(true); connect(m_Controls.tableView, &QTableView::doubleClicked, this, &QmitkPatientTableInspector::OnItemDoubleClicked); } + +void QmitkPatientTableInspector::keyPressEvent(QKeyEvent* e) +{ + mitk::DataNode* dataNode = nullptr; + QModelIndex selectedIndex = m_Controls.tableView->currentIndex(); + if (selectedIndex.isValid()) + { + QVariant qvariantDataNode = m_StorageModel->data(selectedIndex, QmitkDataNodeRawPointerRole); + if (qvariantDataNode.canConvert()) + { + dataNode = qvariantDataNode.value(); + } + } + + if (nullptr == dataNode) + { + return; + } + + int key = e->key(); + switch (key) + { + case Qt::Key_Delete: + emit OnNodeRemoved(dataNode); + break; + default: + break; + } +} diff --git a/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.cpp b/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.cpp index 88b4e9f18a..b2316b2f92 100644 --- a/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.cpp +++ b/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.cpp @@ -1,389 +1,395 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ // semantic relations plugin #include "QmitkSemanticRelationsView.h" #include "QmitkSemanticRelationsNodeSelectionDialog.h" // semantic relations module #include #include #include // mitk qt widgets module #include #include // mitk multi label module #include // berry #include #include // qt #include #include const std::string QmitkSemanticRelationsView::VIEW_ID = "org.mitk.views.semanticrelations"; void QmitkSemanticRelationsView::SetFocus() { // nothing here } void QmitkSemanticRelationsView::CreateQtPartControl(QWidget* parent) { // create GUI widgets m_Controls.setupUi(parent); // initialize the semantic relations m_SemanticRelations = std::make_unique(GetDataStorage()); m_LesionInfoWidget = new QmitkLesionInfoWidget(GetDataStorage(), parent); m_Controls.gridLayout->addWidget(m_LesionInfoWidget); m_PatientTableInspector = new QmitkPatientTableInspector(parent); m_PatientTableInspector->SetDataStorage(GetDataStorage()); m_Controls.gridLayout->addWidget(m_PatientTableInspector); QGridLayout* dndDataNodeWidgetLayout = new QGridLayout; dndDataNodeWidgetLayout->addWidget(m_PatientTableInspector, 0, 0); dndDataNodeWidgetLayout->setContentsMargins(0, 0, 0, 0); m_DnDDataNodeWidget = new QmitkDnDDataNodeWidget(parent); m_DnDDataNodeWidget->setLayout(dndDataNodeWidgetLayout); m_Controls.gridLayout->addWidget(m_DnDDataNodeWidget); m_ContextMenu = new QMenu(m_PatientTableInspector); m_InformationTypeAction = new QmitkDataNodeInformationTypeAction(m_ContextMenu, GetSite()); m_InformationTypeAction->SetDataStorage(GetDataStorage()); m_ContextMenu->addAction(m_InformationTypeAction); m_OpenInAction = new QmitkDataNodeOpenInAction(m_ContextMenu, GetSite()); m_ContextMenu->addAction(m_OpenInAction); mitk::IRenderWindowPart* renderWindowPart = GetRenderWindowPart(); if (nullptr != renderWindowPart) { RenderWindowPartActivated(renderWindowPart); } SetUpConnections(); } void QmitkSemanticRelationsView::RenderWindowPartActivated(mitk::IRenderWindowPart* renderWindowPart) { // connect QmitkRenderWindows - underlying vtkRenderWindow is the same as "mitk::RenderingManager::GetInstance()->GetAllRegisteredRenderWindows()" QHash windowMap = renderWindowPart->GetQmitkRenderWindows(); QHash::Iterator it; mitk::BaseRenderer* baseRenderer = nullptr; RenderWindowLayerUtilities::RendererVector controlledRenderer; for (it = windowMap.begin(); it != windowMap.end(); ++it) { baseRenderer = mitk::BaseRenderer::GetInstance(it.value()->GetVtkRenderWindow()); if (nullptr != baseRenderer) { controlledRenderer.push_back(baseRenderer); } } m_OpenInAction->SetControlledRenderer(controlledRenderer); } void QmitkSemanticRelationsView::RenderWindowPartDeactivated(mitk::IRenderWindowPart* renderWindowPart) { // nothing here } void QmitkSemanticRelationsView::SetUpConnections() { connect(m_Controls.caseIDComboBox, static_cast(&QComboBox::currentIndexChanged), this, &QmitkSemanticRelationsView::OnCaseIDSelectionChanged); connect(m_LesionInfoWidget, &QmitkLesionInfoWidget::LesionChanged, this, &QmitkSemanticRelationsView::OnLesionChanged); connect(m_PatientTableInspector, &QmitkPatientTableInspector::DataNodeDoubleClicked, this, &QmitkSemanticRelationsView::OnDataNodeDoubleClicked); connect(m_DnDDataNodeWidget, &QmitkDnDDataNodeWidget::NodesDropped, this, &QmitkSemanticRelationsView::OnNodesAdded); connect(m_PatientTableInspector, &QmitkPatientTableInspector::OnContextMenuRequested, this, &QmitkSemanticRelationsView::OnContextMenuRequested); + connect(m_PatientTableInspector, &QmitkPatientTableInspector::OnNodeRemoved, this, &QmitkSemanticRelationsView::OnNodeRemoved); } QItemSelectionModel* QmitkSemanticRelationsView::GetDataNodeSelectionModel() const { return m_PatientTableInspector->GetSelectionModel(); } void QmitkSemanticRelationsView::NodeRemoved(const mitk::DataNode* dataNode) { if (nullptr == dataNode) { return; } if (mitk::NodePredicates::GetImagePredicate()->CheckNode(dataNode)) { RemoveImage(dataNode); } else if (mitk::NodePredicates::GetSegmentationPredicate()->CheckNode(dataNode)) { RemoveSegmentation(dataNode); } } void QmitkSemanticRelationsView::OnCaseIDSelectionChanged(const QString& caseID) { m_LesionInfoWidget->SetCurrentCaseID(caseID.toStdString()); m_PatientTableInspector->SetCaseID(caseID.toStdString()); } void QmitkSemanticRelationsView::AddToComboBox(const mitk::SemanticTypes::CaseID& caseID) { int foundIndex = m_Controls.caseIDComboBox->findText(QString::fromStdString(caseID)); if (-1 == foundIndex) { // add the caseID to the combo box, as it is not already contained m_Controls.caseIDComboBox->addItem(QString::fromStdString(caseID)); } } void QmitkSemanticRelationsView::OnLesionChanged(const mitk::SemanticTypes::Lesion& lesion) { m_PatientTableInspector->SetLesion(lesion); } -void QmitkSemanticRelationsView::OnDataNodeDoubleClicked(const mitk::DataNode::Pointer dataNode) +void QmitkSemanticRelationsView::OnDataNodeDoubleClicked(const mitk::DataNode* dataNode) { if (nullptr == dataNode) { return; } if (mitk::NodePredicates::GetImagePredicate()->CheckNode(dataNode)) { OpenInEditor(dataNode); } else if (mitk::NodePredicates::GetSegmentationPredicate()->CheckNode(dataNode)) { JumpToPosition(dataNode); } } void QmitkSemanticRelationsView::OnNodesAdded(QmitkDnDDataNodeWidget* dnDDataNodeWidget, std::vector nodes) { for (mitk::DataNode* dataNode : nodes) { if (nullptr == dataNode) { continue; } if (mitk::NodePredicates::GetImagePredicate()->CheckNode(dataNode)) { AddImage(dataNode); } else if (mitk::NodePredicates::GetSegmentationPredicate()->CheckNode(dataNode)) { AddSegmentation(dataNode); } } } void QmitkSemanticRelationsView::OnContextMenuRequested(const QPoint& /*pos*/) { m_ContextMenu->popup(QCursor::pos()); } +void QmitkSemanticRelationsView::OnNodeRemoved(const mitk::DataNode* dataNode) +{ + NodeRemoved(dataNode); +} + void QmitkSemanticRelationsView::RemoveFromComboBox(const mitk::SemanticTypes::CaseID& caseID) { std::vector allControlPoints = m_SemanticRelations->GetAllControlPointsOfCase(caseID); int foundIndex = m_Controls.caseIDComboBox->findText(QString::fromStdString(caseID)); if (allControlPoints.empty() && -1 != foundIndex) { // TODO: find new way to check for empty case id // caseID does not contain any control points and therefore no data // remove the caseID, if it is still contained m_Controls.caseIDComboBox->removeItem(foundIndex); } } -void QmitkSemanticRelationsView::OpenInEditor(const mitk::DataNode::Pointer dataNode) +void QmitkSemanticRelationsView::OpenInEditor(const mitk::DataNode* dataNode) { auto renderWindowPart = GetRenderWindowPart(); if (nullptr == renderWindowPart) { renderWindowPart = GetRenderWindowPart(QmitkAbstractView::BRING_TO_FRONT | QmitkAbstractView::OPEN); if (nullptr == renderWindowPart) { // no render window available return; } } auto image = dynamic_cast(dataNode->GetData()); if (nullptr != image) { mitk::RenderingManager::GetInstance()->InitializeViews(image->GetTimeGeometry(), mitk::RenderingManager::REQUEST_UPDATE_ALL, true); } } -void QmitkSemanticRelationsView::JumpToPosition(const mitk::DataNode::Pointer dataNode) +void QmitkSemanticRelationsView::JumpToPosition(const mitk::DataNode* dataNode) { if (nullptr == dataNode) { return; } mitk::LabelSetImage* labelSetImage = dynamic_cast(dataNode->GetData()); if (nullptr == labelSetImage) { return; } int activeLayer = labelSetImage->GetActiveLayer(); mitk::Label* activeLabel = labelSetImage->GetActiveLabel(activeLayer); labelSetImage->UpdateCenterOfMass(activeLabel->GetValue(), activeLayer); const mitk::Point3D& centerPosition = activeLabel->GetCenterOfMassCoordinates(); if (centerPosition.GetVnlVector().max_value() > 0.0) { auto renderWindowPart = GetRenderWindowPart(); if (nullptr == renderWindowPart) { renderWindowPart = GetRenderWindowPart(QmitkAbstractView::BRING_TO_FRONT | QmitkAbstractView::OPEN); if (nullptr == renderWindowPart) { // no render window available return; } } auto segmentation = dynamic_cast(dataNode->GetData()); if (nullptr != segmentation) { renderWindowPart->SetSelectedPosition(centerPosition); mitk::RenderingManager::GetInstance()->InitializeViews(segmentation->GetTimeGeometry(), mitk::RenderingManager::REQUEST_UPDATE_ALL, true); } } } void QmitkSemanticRelationsView::AddImage(const mitk::DataNode* image) { if (nullptr == image) { return; } try { // add the image to the semantic relations storage m_SemanticRelations->AddImage(image); mitk::SemanticTypes::CaseID caseID = mitk::GetCaseIDFromDataNode(image); AddToComboBox(caseID); } catch (const mitk::SemanticRelationException& e) { std::stringstream exceptionMessage; exceptionMessage << e; QMessageBox msgBox; msgBox.setWindowTitle("Could not add the selected image."); msgBox.setText("The program wasn't able to correctly add the selected images.\n" "Reason:\n" + QString::fromStdString(exceptionMessage.str())); msgBox.setIcon(QMessageBox::Warning); msgBox.exec(); return; } } void QmitkSemanticRelationsView::AddSegmentation(const mitk::DataNode* segmentation) { if (nullptr == segmentation) { return; } mitk::BaseData* baseData = segmentation->GetData(); if (nullptr == baseData) { return; } // continue with valid segmentation data // get parent node of the current segmentation node with the node predicate mitk::DataStorage::SetOfObjects::ConstPointer parentNodes = GetDataStorage()->GetSources(segmentation, mitk::NodePredicates::GetImagePredicate(), false); // check for already existing, identifying base properties mitk::BaseProperty* caseIDProperty = baseData->GetProperty("DICOM.0010.0010"); mitk::BaseProperty* nodeIDProperty = baseData->GetProperty("DICOM.0020.000E"); if (nullptr == caseIDProperty || nullptr == nodeIDProperty) { MITK_INFO << "No DICOM tags for case and node identification found. Transferring DICOM tags from the parent node to the selected segmentation node."; mitk::SemanticTypes::CaseID caseID = mitk::GetCaseIDFromDataNode(parentNodes->front()); mitk::SemanticTypes::ID nodeID = mitk::GetIDFromDataNode(parentNodes->front()); // transfer DICOM tags to the segmentation node mitk::StringProperty::Pointer caseIDTag = mitk::StringProperty::New(caseID); baseData->SetProperty("DICOM.0010.0010", caseIDTag); // DICOM tag is "PatientName" // add UID to distinguish between different segmentations of the same parent node mitk::StringProperty::Pointer nodeIDTag = mitk::StringProperty::New(nodeID + mitk::UIDGeneratorBoost::GenerateUID()); baseData->SetProperty("DICOM.0020.000E", nodeIDTag); // DICOM tag is "SeriesInstanceUID" } try { m_SemanticRelations->AddSegmentation(segmentation, parentNodes->front()); } catch (const mitk::SemanticRelationException& e) { std::stringstream exceptionMessage; exceptionMessage << e; QMessageBox msgBox; msgBox.setWindowTitle("Could not add the selected segmentation."); msgBox.setText("The program wasn't able to correctly add the selected segmentation.\n" "Reason:\n" + QString::fromStdString(exceptionMessage.str())); msgBox.setIcon(QMessageBox::Warning); msgBox.exec(); return; } } void QmitkSemanticRelationsView::RemoveImage(const mitk::DataNode* image) { try { m_SemanticRelations->RemoveImage(image); mitk::SemanticTypes::CaseID caseID = mitk::GetCaseIDFromDataNode(image); RemoveFromComboBox(caseID); } catch (const mitk::SemanticRelationException& e) { std::stringstream exceptionMessage; exceptionMessage << e; MITK_WARN << "Could not correctly remove the selected image from the semantic relations model.\n" << "Reason: " + exceptionMessage.str(); } } void QmitkSemanticRelationsView::RemoveSegmentation(const mitk::DataNode* segmentation) { try { m_SemanticRelations->RemoveSegmentation(segmentation); } catch (const mitk::SemanticRelationException& e) { std::stringstream exceptionMessage; exceptionMessage << e; MITK_WARN << "Could not correctly remove the selected segmentation from the semantic relations model.\n" << "Reason: " + exceptionMessage.str(); } } diff --git a/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.h b/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.h index 4b804197be..b2d51657b9 100644 --- a/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.h +++ b/Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.h @@ -1,122 +1,123 @@ /*=================================================================== The Medical Imaging Interaction Toolkit (MITK) Copyright (c) German Cancer Research Center, Division of Medical and Biological Informatics. All rights reserved. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See LICENSE.txt or http://www.mitk.org for details. ===================================================================*/ #ifndef QMITKSEMANTICRELATIONSVIEW_H #define QMITKSEMANTICRELATIONSVIEW_H // semantic relations plugin #include "ui_QmitkSemanticRelationsControls.h" #include "QmitkDataNodeInformationTypeAction.h" #include "QmitkDataNodeOpenInAction.h" #include "QmitkLesionInfoWidget.h" // semantic relations module #include #include // semantic relations UI module #include // mitk gui common plugin #include // berry #include // mitk qt #include class QmitkDnDDataNodeWidget; class QMenu; /* * @brief The QmitkSemanticRelationsView is an MITK view to combine and show the widgets of the 'SemanticRelationsUI'-module and this semantic relations plugin. * * It allows the MITK user to see and modify the content of the SemanticRelations-session. * A combo box is used to select and show the current patient. * * SIDE NOTE: Modifying the control points and information types of data in the semantic relations model is currently done * by using the right-click context-menu of the "PatientTableWidget" in the "Select Patient Node"-Dialog. * This is a leftover from when the widget was not used as a selection widget. Those functionality will be moved * to this main GUI soon. */ class QmitkSemanticRelationsView : public QmitkAbstractView, public mitk::IRenderWindowPartListener { Q_OBJECT public: static const std::string VIEW_ID; protected: virtual void SetFocus() override; virtual void CreateQtPartControl(QWidget* parent) override; virtual void RenderWindowPartActivated(mitk::IRenderWindowPart* renderWindowPart) override; virtual void RenderWindowPartDeactivated(mitk::IRenderWindowPart* renderWindowPart) override; private Q_SLOTS: void OnCaseIDSelectionChanged(const QString&); void AddToComboBox(const mitk::SemanticTypes::CaseID&); void OnLesionChanged(const mitk::SemanticTypes::Lesion&); - void OnDataNodeDoubleClicked(const mitk::DataNode::Pointer); + void OnDataNodeDoubleClicked(const mitk::DataNode*); void OnNodesAdded(QmitkDnDDataNodeWidget*, std::vector); void OnContextMenuRequested(const QPoint&); + void OnNodeRemoved(const mitk::DataNode* dataNode); private: void SetUpConnections(); /** * @brief Provide a QItemSelectionModel, which supports the data role 'QmitkDataNodeRole' (\see QmitkRenderWindowDataModel). * * The provided QItemSelectionModel is used in the QmitkAbstractView-base class as the selection model of * the selection provider (\see QmitkAbstractView::SetSelectionProvider()). * The default selection provider is a QmitkDataNodeSelectionProvider. Each time a selection in the provided * QItemSeletionModel is changed, a selection changed event is fired. All plugins (views), that subclass the * QmitkAbstractView will be informed about the selection changed via the OnSelectionChanged-function. */ virtual QItemSelectionModel* GetDataNodeSelectionModel() const override; virtual void NodeRemoved(const mitk::DataNode* dataNode) override; void RemoveFromComboBox(const mitk::SemanticTypes::CaseID& caseID); - void OpenInEditor(const mitk::DataNode::Pointer dataNode); - void JumpToPosition(const mitk::DataNode::Pointer dataNode); + void OpenInEditor(const mitk::DataNode* dataNode); + void JumpToPosition(const mitk::DataNode* dataNode); void AddImage(const mitk::DataNode* image); void AddSegmentation(const mitk::DataNode* segmentation); void RemoveImage(const mitk::DataNode* image); void RemoveSegmentation(const mitk::DataNode* segmentation); Ui::QmitkSemanticRelationsControls m_Controls; QmitkLesionInfoWidget* m_LesionInfoWidget; QmitkPatientTableInspector* m_PatientTableInspector; QmitkDnDDataNodeWidget* m_DnDDataNodeWidget; QMenu* m_ContextMenu; QmitkDataNodeInformationTypeAction* m_InformationTypeAction; QmitkDataNodeOpenInAction* m_OpenInAction; std::unique_ptr m_SemanticRelations; }; #endif // QMITKSEMANTICRELATIONSVIEW_H