Interpolation fails on slice with pixel hole near the segmentation border
Effect on video is 100% reproducible when you add one pixel-width line near the border of segmentation on some slice
code:
mitk::Image::Pointer mitk::ShapeBasedInterpolationAlgorithm::Interpolate( Image::ConstPointer lowerSlice, unsigned int lowerSliceIndex, Image::ConstPointer upperSlice, unsigned int upperSliceIndex, unsigned int requestedIndex, unsigned int /*sliceDimension*/, // commented variables are not used Image::Pointer resultImage, unsigned int /*timeStep*/, Image::ConstPointer /*referenceImage*/) { mitk::Image::Pointer lowerDistanceImage = mitk::Image::New(); AccessFixedDimensionByItk_1(lowerSlice, ComputeDistanceMap, 2, lowerDistanceImage); mitk::Image::Pointer upperDistanceImage = mitk::Image::New(); AccessFixedDimensionByItk_1(upperSlice, ComputeDistanceMap, 2, upperDistanceImage); // calculate where the current slice is in comparison to the lower and upper neighboring slices float ratio = (float)(requestedIndex - lowerSliceIndex) / (float)(upperSliceIndex - lowerSliceIndex); AccessFixedDimensionByItk_3(resultImage, InterpolateIntermediateSlice, 2, upperDistanceImage, lowerDistanceImage, ratio); return resultImage; }
Mirror on ITK JIRA: https://issues.itk.org/jira/browse/ITK-3524
video attached