'roi_labels'->'class_target' in final batch. tutorial, cluster usage updates.

tutorial

preliminary release notes. tutorial for adding datasets

cuda device selection. fix in test example plot

incl gpu arch hint for custom exts in readme

fix in params parsing for optim

fix in params parsing for optim

fix in params parsing for optim

resultstable as csv

naming changes: cf.eval_test_fold_wise->not cf.ensemble_folds (incl inversion)…

hold-out test set settings, options

optionally exclude norm and or bias from weight decay

hold-out test set settings, options

gt anchor matching fix.

opt exclude from weight dec. eval fix.

toy configs change

opt exclude from weight dec. eval fix.

easier resuming to checkpoint: bool flag instead of checkpt path.

test plots in structured folders. hold-out analysis. predictor fix merge2d3d

fix in data loader debug function

toy data generation optionally single-processed

fix in toy dataloader.

Merge branch 'torch1x' of https://phabricator.mitk.org/source/mdt-public into…

adam->adamw. fix in toy dataloader.

replace adam by adamw. exclude norm and bias wghts from weight decay.

update cluster shell scripts

replace adam by adamw. exclude norm and bias wghts from weight decay.

working det unet in mdt toy dataset

update cluster shell scripts

add mdt toy dataset

update install instructs. add cluster shell scripts

tiny change in comments

update install instructs. add cluster shell scripts

include losses in results dict --> monitoring. adapt results_dict/results_list…

updates to server-env-related settings

unittest for fold splits assignements

extend nms test by manual example

updates to server-env-related settings

updates to server-env-related settings

fix lidc server env data copying

data_dest instead of slurm_job_id for data copying in server env

dynamic lr scheduling in lidc configs

reqs update

extensions setup update

extensions setup update. reqs udpates.

extensions setup update. reqs udpates.

reqs update

re-add roi_al extension srcs

update pillow in reqs

update pillow in reqs

merge

prepro import fix

Merge branch 'torch1x' of ssh://phabricator.mitk.org:2222/source/mdt-public…

intermed save

intermed save

fix multi-fold submission cluster runner scripts

update cluster runner scripts

add cluster runner scripts

data_dest for server_env instead of slurm_job_id

include installing extensions from wheel instead only source

WIP on torch1x: c8c43d6 fix tboard holding up script exit

index on torch1x: c8c43d6 fix tboard holding up script exit

fix tboard holding up script exit

fix tboard holding up script exit

fix tboard holding up script exit

revert roialign to original grid points methods (as in tv.ops)

toy data: make noise optional

toy data dir fix

req update

req update

update batch sampling description

update batch sampling description

return roial grid points to orig method (tv.ops).

return roial grid points to orig method (tv.ops). automatic checkpoint path…

return roial grid points to orig method (tv.ops). automatic checkpoint path…

model selector: argsort->stable

no focal loss in configs

dataloader updates

dataloader updates

dataloader updates

dataloader bg balancing change. need to check for lidc

req update

lidc sa dataloader fix

req update

single-anno lidc dataloader mp batch balancing. split-off plotting to not hold…

dataloader bg balancing change. need to check for lidc

dataloader balancing update

dataloader balancing update

pre dataloader update

dataloader multithreaded iterating fix

dataloader multithreaded iterating fix

x-y-confusion fix RoIAlign

x-y-confusion fix roi align

branch-change

eod save

eod save

x-y-confusion fix roi align

introduce tensorboard logging of monitor metrics instead of matplotlib plot

load saved models directly instead from tmp_model, tmp_backbone

reqs