Merge branch 'T22946-Integration-alpha' into T22946-Integration-beta
09f9cd7807c0
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Description

Merge branch 'T22946-Integration-alpha' into T22946-Integration-beta

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Provenance

kalali	Authored on Jan 9 2019, 2:06 PM
kalali	Pushed on Jan 23 2019, 10:38 AM

Parents

rMITK45c5e13227d6: Add registration ontology module
rMITK391930d97c04: Merge branch 'T25703-FixBoostScript'

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kalali committed rMITK09f9cd7807c0: Merge branch 'T22946-Integration-alpha' into T22946-Integration-beta (authored by kalali).Jan 11 2019, 12:44 PM

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This commit merges a very large number of changes. Only the first 50 are shown.

45c5e13227d6 Add registration ontology module
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d6994ca57373 Add action to the lesion widget for lesion propagation
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aa499d618868 Some refactoring
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54a4bbff165b Merge branch 'T25533-Remove-data-storage' into T22946-Integration-alpha
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c755b4692f56 Clean namespace
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8ed8ea44f6d8 Remove data storage from relation storage; use weak pointer
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79867ec5da6d Initialize semantic relations view on activation, if data exists
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52023c609768 Some renaming, clean code
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5bd0eb94bd39 Remove some 'else'
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97248ed76c9b Set data node selection presence for lesion widget
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c9e67f92737c Remove namespace, remove unnecessary include and class member
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9629eae93f2c Merge branch 'T25503-Standard-date-type' into T22946-Integration-alpha
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92b3de489788 Simplify the way pixmaps and lesion presences are computed
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4d75682966f7 Use boost gregorian date for control points
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afc1f93cc56b Add item delegate to center pixmap; wip as it changes the background role…
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de0af61b0134 Fix time distance computation
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6a995803beb0 Set a name for a new examination period and display it in the multi-header.
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2c2ae4be0b8f Combine multi-header with examination periods
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c792aebf62e0 Some refactoring
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ec7794108ad0 Merge branch 'T25294-Lesion-controlpoint-inspector' into T22946-Integration…
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b18c2071e93b Add context menu action to unlink a segmentation from its lesion
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6cd776611a1a Use a readable name for a new lesion
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e7d679457691 Select whole row and emit only one signal for each selection changed event
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c73dc5640376 Move the presence and colume computation; change some namespaces
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f7c6b11f05a3 Change header layout; add function to retrieve control point by UID
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b11cf1ce931d Merge branch 'T25488-New-controlpoint-type' into T22946-Integration-alpha
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d8c6101d4ec8 Merge branch 'T25293-Multi-header-table' into T22946-Integration-alpha
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5edcb0a390a0 Add examination period that contains the represented control points
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195fd88788e1 Remove data; store date directly in controlpoint; control point does not…
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e327346f1101 First draft of a hierarchical header
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4d7938127073 Some refactoring
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68cc5ae32f84 Rename and refactor code; add child item to show volume information
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fd952ae1cb88 Some corrections
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7c6f57eb2999 Add basic lesion tree model with lesion items and lesion data
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b355330dc5e5 Some refactoring
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cc9ca3a1700c Merge branch 'T25257-Use-storage-inspector' into T22946-Integration-alpha
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0d3cca0743d8 Add actions to add / remove data nodes to / from semantic relations
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4b03da8333db Check for existing data node instasnce in semantic relations
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e1a91afddad1 Add control point action and context menu
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f6d5548cc024 Add deleting nodes by key stroke
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82f8cac4e4c0 Add two custom actions
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4c73d202642b Prepare SemanticRelations for custom actions
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ff31476e4dd4 Change the way lesion presence is visualized in the patient table inspector
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4debba9ca4f4 Enable thumbnails if no / invalid lesion is selected
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5a65724dcfe6 Add double-click functionality for images and segmentations in the patient…
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a641af1025b9 Add drag 'n' drop widget to move nodes from the data storage to the patient…
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1f7fea3a3484 Remove list widgets and replace with patient table inspector
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026578353373 Merge commit 'ffaf13105d2a2ef482175b70da855530c84222ae' into T22946-Integration…
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ffaf13105d2a Use SemanticRelationsException for exceptions thrown inside the semantic…
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da356710252e Fix removing only valid image- and segmentation-nodes.
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Changes (110)

Path

Size

Packages

CMakeExternals/

MatchPoint.cmake

O1: MITK Reviewer Group I

Modules/

Core/

src/

DataManagement/

mitkVectorProperty.cpp

O1: MITK Reviewer Group I

ModuleList.cmake

QtWidgets/

files.cmake

O3: MITK Reviewer Group II

include/

QmitkDnDDataNodeWidget.h

O3: MITK Reviewer Group II

src/

QmitkDnDDataNodeWidget.cpp

O3: MITK Reviewer Group II

mitkLesionPropagation.h

src

mitkLesionPropagation.cpp

mitkSemanticRelationsTest.cpp

files.cmake

include

mitkControlPointManager.h

mitkDICOMHelper.h

mitkISemanticRelationsObservable.h

mitkISemanticRelationsObserver.h

mitkLesionData.h

mitkLesionManager.h

mitkNodePredicates.h

mitkRelationStorage.h

mitkSemanticRelationException.h

mitkSemanticRelations.h

mitkSemanticTypes.h

mitkUIDGeneratorBoost.h

src

mitkControlPointManager.cpp

mitkDICOMHelper.cpp

mitkLesionData.cpp

mitkLesionManager.cpp

mitkNodePredicates.cpp

mitkRelationStorage.cpp

mitkSemanticRelations.cpp

mitkUIDGeneratorBoost.cpp

QmitkAbstractSemanticRelationsStorageInspector.h

QmitkAbstractSemanticRelationsStorageModel.h

QmitkControlPointDialog.h

QmitkLesionTextDialog.h

QmitkLesionTreeItem.h

QmitkLesionTreeModel.h

QmitkPatientInfoWidget.h

QmitkPatientTableHeaderView.h

QmitkPatientTableInspector.h

QmitkPatientTableModel.h

QmitkSemanticRelationsUIHelper.h

QmitkTableItemThumbnailDelegate.h

mitkModuleActivator.h

src

QmitkAbstractSemanticRelationsStorageModel.cpp

QmitkControlPointDialog.cpp

QmitkLesionTextDialog.cpp

QmitkLesionTreeItem.cpp

QmitkLesionTreeModel.cpp

QmitkPatientInfoWidget.cpp

QmitkPatientInfoWidgetControls.ui

QmitkPatientTableHeaderView.cpp

QmitkPatientTableInspector.cpp

QmitkPatientTableInspector.ui

QmitkPatientTableModel.cpp

QmitkSemanticRelationsUIHelper.cpp

QmitkTableItemThumbnailDelegate.cpp

mitkModuleActivator.cpp

Plugins/

PluginList.cmake

org.mitk.gui.qt.common/

src/

QmitkNodeSelectionDialog.cpp

O1: MITK Reviewer Group I

QmitkNodeSelectionDialog.h

O1: MITK Reviewer Group I

org.mitk.gui.qt.semanticrelations

CMakeLists.txt

files.cmake

manifest_headers.cmake

plugin.xml

resources

SemanticRelations_48.png

src

internal

QmitkDataNodeAddToSemanticRelationsAction.cpp

QmitkDataNodeAddToSemanticRelationsAction.h

QmitkDataNodeInformationTypeAction.cpp

QmitkDataNodeInformationTypeAction.h

QmitkDataNodeOpenInAction.cpp

QmitkDataNodeOpenInAction.h

QmitkDataNodeRemoveFromSemanticRelationsAction.cpp

QmitkDataNodeRemoveFromSemanticRelationsAction.h

QmitkDataNodeSetControlPointAction.cpp

QmitkDataNodeSetControlPointAction.h

QmitkDataNodeUnlinkFromLesionAction.cpp

QmitkDataNodeUnlinkFromLesionAction.h

QmitkLesionInfoWidget.cpp

QmitkLesionInfoWidget.h

QmitkLesionInfoWidgetControls.ui

QmitkSemanticRelationsContextMenu.cpp

QmitkSemanticRelationsContextMenu.h

QmitkSemanticRelationsControls.ui

QmitkSemanticRelationsNodeSelectionDialog.cpp

QmitkSemanticRelationsNodeSelectionDialog.h

QmitkSemanticRelationsView.cpp

QmitkSemanticRelationsView.h

mitkPluginActivator.cpp

mitkPluginActivator.h

rMITK09f9cd7807c0

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CMakeExternals/MatchPoint.cmake

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Modules/Core/src/DataManagement/mitkVectorProperty.cpp

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Modules/ModuleList.cmake

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Modules/QtWidgets/files.cmake

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Modules/QtWidgets/include/QmitkDnDDataNodeWidget.h

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Modules/QtWidgets/src/QmitkDnDDataNodeWidget.cpp

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Modules/RegistrationOntology/CMakeLists.txt

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Modules/RegistrationOntology/files.cmake

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Modules/RegistrationOntology/include/mitkLesionPropagation.h

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Modules/RegistrationOntology/src/mitkLesionPropagation.cpp

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Modules/SemanticRelations/CMakeLists.txt

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Modules/SemanticRelations/Testing/CMakeLists.txt

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Modules/SemanticRelations/Testing/files.cmake

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Modules/SemanticRelations/Testing/mitkSemanticRelationsTest.cpp

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Modules/SemanticRelations/files.cmake

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Modules/SemanticRelations/include/mitkControlPointManager.h

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Modules/SemanticRelations/include/mitkDICOMHelper.h

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Modules/SemanticRelations/include/mitkISemanticRelationsObservable.h

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Modules/SemanticRelations/include/mitkISemanticRelationsObserver.h

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Modules/SemanticRelations/include/mitkLesionData.h

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Modules/SemanticRelations/include/mitkLesionManager.h

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Modules/SemanticRelations/include/mitkNodePredicates.h

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Modules/SemanticRelations/include/mitkRelationStorage.h

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Modules/SemanticRelations/include/mitkSemanticRelationException.h

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Modules/SemanticRelations/include/mitkSemanticRelations.h

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Modules/SemanticRelations/include/mitkSemanticTypes.h

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Modules/SemanticRelations/include/mitkUIDGeneratorBoost.h

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Modules/SemanticRelations/src/mitkControlPointManager.cpp

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Modules/SemanticRelations/src/mitkDICOMHelper.cpp

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Modules/SemanticRelations/src/mitkLesionData.cpp

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Modules/SemanticRelations/src/mitkLesionManager.cpp

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Modules/SemanticRelations/src/mitkNodePredicates.cpp

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Modules/SemanticRelations/src/mitkRelationStorage.cpp

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Modules/SemanticRelations/src/mitkSemanticRelations.cpp

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Modules/SemanticRelations/src/mitkUIDGeneratorBoost.cpp

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Modules/SemanticRelationsUI/CMakeLists.txt

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Modules/SemanticRelationsUI/files.cmake

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Modules/SemanticRelationsUI/include/QmitkAbstractSemanticRelationsStorageInspector.h

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Modules/SemanticRelationsUI/include/QmitkAbstractSemanticRelationsStorageModel.h

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Modules/SemanticRelationsUI/include/QmitkControlPointDialog.h

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Modules/SemanticRelationsUI/include/QmitkLesionTextDialog.h

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Modules/SemanticRelationsUI/include/QmitkLesionTreeItem.h

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Modules/SemanticRelationsUI/include/QmitkLesionTreeModel.h

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Modules/SemanticRelationsUI/include/QmitkPatientInfoWidget.h

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Modules/SemanticRelationsUI/include/QmitkPatientTableHeaderView.h

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Modules/SemanticRelationsUI/include/QmitkPatientTableInspector.h

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Modules/SemanticRelationsUI/include/QmitkPatientTableModel.h

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Modules/SemanticRelationsUI/include/QmitkSemanticRelationsUIHelper.h

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Modules/SemanticRelationsUI/include/QmitkTableItemThumbnailDelegate.h

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Modules/SemanticRelationsUI/include/mitkModuleActivator.h

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Modules/SemanticRelationsUI/src/QmitkAbstractSemanticRelationsStorageModel.cpp

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Modules/SemanticRelationsUI/src/QmitkControlPointDialog.cpp

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Modules/SemanticRelationsUI/src/QmitkLesionTextDialog.cpp

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Modules/SemanticRelationsUI/src/QmitkLesionTreeItem.cpp

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Modules/SemanticRelationsUI/src/QmitkLesionTreeModel.cpp

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Modules/SemanticRelationsUI/src/QmitkPatientInfoWidget.cpp

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Modules/SemanticRelationsUI/src/QmitkPatientInfoWidgetControls.ui

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Modules/SemanticRelationsUI/src/QmitkPatientTableHeaderView.cpp

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Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.cpp

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Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.ui

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Modules/SemanticRelationsUI/src/QmitkPatientTableModel.cpp

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Modules/SemanticRelationsUI/src/QmitkSemanticRelationsUIHelper.cpp

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Modules/SemanticRelationsUI/src/QmitkTableItemThumbnailDelegate.cpp

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Modules/SemanticRelationsUI/src/mitkModuleActivator.cpp

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Plugins/PluginList.cmake

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Plugins/org.mitk.gui.qt.common/src/QmitkNodeSelectionDialog.cpp

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Plugins/org.mitk.gui.qt.common/src/QmitkNodeSelectionDialog.h

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Plugins/org.mitk.gui.qt.semanticrelations/CMakeLists.txt

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Plugins/org.mitk.gui.qt.semanticrelations/files.cmake

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Plugins/org.mitk.gui.qt.semanticrelations/manifest_headers.cmake

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Plugins/org.mitk.gui.qt.semanticrelations/plugin.xml

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Plugins/org.mitk.gui.qt.semanticrelations/resources/SemanticRelations_48.png

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeAddToSemanticRelationsAction.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeAddToSemanticRelationsAction.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeInformationTypeAction.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeInformationTypeAction.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeOpenInAction.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeOpenInAction.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeRemoveFromSemanticRelationsAction.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeRemoveFromSemanticRelationsAction.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeSetControlPointAction.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeSetControlPointAction.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeUnlinkFromLesionAction.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeUnlinkFromLesionAction.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkLesionInfoWidget.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkLesionInfoWidget.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkLesionInfoWidgetControls.ui

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsContextMenu.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsContextMenu.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsControls.ui

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsNodeSelectionDialog.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsNodeSelectionDialog.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkSemanticRelationsView.h

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/mitkPluginActivator.cpp

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Plugins/org.mitk.gui.qt.semanticrelations/src/internal/mitkPluginActivator.h

Merge branch 'T22946-Integration-alpha' into T22946-Integration-beta09f9cd7807c0Actions

Description

Details

Event Timeline

Merged Changes

Changes (110)

rMITK09f9cd7807c0

CMakeExternals/MatchPoint.cmake

Modules/Core/src/DataManagement/mitkVectorProperty.cpp

Modules/ModuleList.cmake

Modules/QtWidgets/files.cmake

Modules/QtWidgets/include/QmitkDnDDataNodeWidget.h

Modules/QtWidgets/src/QmitkDnDDataNodeWidget.cpp

Modules/RegistrationOntology/CMakeLists.txt

Modules/RegistrationOntology/files.cmake

Modules/RegistrationOntology/include/mitkLesionPropagation.h

Modules/RegistrationOntology/src/mitkLesionPropagation.cpp

Modules/SemanticRelations/CMakeLists.txt

Modules/SemanticRelations/Testing/CMakeLists.txt

Modules/SemanticRelations/Testing/files.cmake

Modules/SemanticRelations/Testing/mitkSemanticRelationsTest.cpp

Modules/SemanticRelations/files.cmake

Modules/SemanticRelations/include/mitkControlPointManager.h

Modules/SemanticRelations/include/mitkDICOMHelper.h

Modules/SemanticRelations/include/mitkISemanticRelationsObservable.h

Modules/SemanticRelations/include/mitkISemanticRelationsObserver.h

Modules/SemanticRelations/include/mitkLesionData.h

Modules/SemanticRelations/include/mitkLesionManager.h

Modules/SemanticRelations/include/mitkNodePredicates.h

Modules/SemanticRelations/include/mitkRelationStorage.h

Modules/SemanticRelations/include/mitkSemanticRelationException.h

Modules/SemanticRelations/include/mitkSemanticRelations.h

Modules/SemanticRelations/include/mitkSemanticTypes.h

Modules/SemanticRelations/include/mitkUIDGeneratorBoost.h

Modules/SemanticRelations/src/mitkControlPointManager.cpp

Modules/SemanticRelations/src/mitkDICOMHelper.cpp

Modules/SemanticRelations/src/mitkLesionData.cpp

Modules/SemanticRelations/src/mitkLesionManager.cpp

Modules/SemanticRelations/src/mitkNodePredicates.cpp

Modules/SemanticRelations/src/mitkRelationStorage.cpp

Modules/SemanticRelations/src/mitkSemanticRelations.cpp

Modules/SemanticRelations/src/mitkUIDGeneratorBoost.cpp

Modules/SemanticRelationsUI/CMakeLists.txt

Modules/SemanticRelationsUI/files.cmake

Modules/SemanticRelationsUI/include/QmitkAbstractSemanticRelationsStorageInspector.h

Modules/SemanticRelationsUI/include/QmitkAbstractSemanticRelationsStorageModel.h

Modules/SemanticRelationsUI/include/QmitkControlPointDialog.h

Modules/SemanticRelationsUI/include/QmitkLesionTextDialog.h

Modules/SemanticRelationsUI/include/QmitkLesionTreeItem.h

Modules/SemanticRelationsUI/include/QmitkLesionTreeModel.h

Modules/SemanticRelationsUI/include/QmitkPatientInfoWidget.h

Modules/SemanticRelationsUI/include/QmitkPatientTableHeaderView.h

Modules/SemanticRelationsUI/include/QmitkPatientTableInspector.h

Modules/SemanticRelationsUI/include/QmitkPatientTableModel.h

Modules/SemanticRelationsUI/include/QmitkSemanticRelationsUIHelper.h

Modules/SemanticRelationsUI/include/QmitkTableItemThumbnailDelegate.h

Modules/SemanticRelationsUI/include/mitkModuleActivator.h

Modules/SemanticRelationsUI/src/QmitkAbstractSemanticRelationsStorageModel.cpp

Modules/SemanticRelationsUI/src/QmitkControlPointDialog.cpp

Modules/SemanticRelationsUI/src/QmitkLesionTextDialog.cpp

Modules/SemanticRelationsUI/src/QmitkLesionTreeItem.cpp

Modules/SemanticRelationsUI/src/QmitkLesionTreeModel.cpp

Modules/SemanticRelationsUI/src/QmitkPatientInfoWidget.cpp

Modules/SemanticRelationsUI/src/QmitkPatientInfoWidgetControls.ui

Modules/SemanticRelationsUI/src/QmitkPatientTableHeaderView.cpp

Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.cpp

Modules/SemanticRelationsUI/src/QmitkPatientTableInspector.ui

Modules/SemanticRelationsUI/src/QmitkPatientTableModel.cpp

Modules/SemanticRelationsUI/src/QmitkSemanticRelationsUIHelper.cpp

Modules/SemanticRelationsUI/src/QmitkTableItemThumbnailDelegate.cpp

Modules/SemanticRelationsUI/src/mitkModuleActivator.cpp

Plugins/PluginList.cmake

Plugins/org.mitk.gui.qt.common/src/QmitkNodeSelectionDialog.cpp

Plugins/org.mitk.gui.qt.common/src/QmitkNodeSelectionDialog.h

Plugins/org.mitk.gui.qt.semanticrelations/CMakeLists.txt

Plugins/org.mitk.gui.qt.semanticrelations/files.cmake

Plugins/org.mitk.gui.qt.semanticrelations/manifest_headers.cmake

Plugins/org.mitk.gui.qt.semanticrelations/plugin.xml

Plugins/org.mitk.gui.qt.semanticrelations/resources/SemanticRelations_48.png

Plugins/org.mitk.gui.qt.semanticrelations/src/internal/QmitkDataNodeAddToSemanticRelationsAction.cpp

Merge branch 'T22946-Integration-alpha' into T22946-Integration-beta
09f9cd7807c0
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