Diffusion MITK b02e627d1b6b

Merge branch 'bug-16236-hotspot-search-imagestatisticscalculator' into bug…
b02e627d1b6b
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Description

Merge branch 'bug-16236-hotspot-search-imagestatisticscalculator' into bug-16236-hotspot-search-imagestatisticscalculator-integration-snapshot

Conflicts:
Modules/ImageStatistics/Testing/mitkImageStatisticsHotspotTest.cpp
Modules/ImageStatistics/mitkImageStatisticsCalculator.cpp
Modules/ImageStatistics/mitkImageStatisticsCalculator.h

Details

Provenance

Authored on Feb 3 2014, 5:16 PM

Parents

rMITKc6e72f56294b: Merge branch 'bug-16744-develop' into releases/snapshot-201308-v2
rMITK1a0f2c5c808d: New XML-files for hotspot-test

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Event Timeline

saruji committed rMITKb02e627d1b6b: Merge branch 'bug-16236-hotspot-search-imagestatisticscalculator' into bug… (authored by saruji).Feb 3 2014, 5:16 PM

Merged Changes

1a0f2c5c808d New XML-files for hotspot-test
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• grafa
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a5455fa80f54 fix compile errors on linux
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saruji
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4402e1e20f1c Merge remote-tracking branch 'origin/bug-16396-gaussian-image-generator-for…
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saruji
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4bbef6a835ac Changed value of epsilon
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• grafa
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0a9efdc8e2f9 Did some changes in the documentation
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• grafa
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161a0a3e0a4c Fixed bugs in Hotspot-Test and convolution-kernel-calculation, added variance…
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• grafa
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f40a6b186ba5 Added another comment
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• grafa
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df59160b24f2 Edited documentation, added comments and a new version of hotspotcase5-image
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• grafa
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9b3dcfef5c0b Added images for documentation
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• grafa
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6f2e8ed4ddfc Multi-label statistic-calculation is now supported in hotspot-test
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• grafa
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7c0c4cb3f803 Added case that it is optional if hotspot is completly inside image or not and…
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• grafa
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8768426dff46 Mark locations for addition of "m_HotspotMustBeCompletelyInsideImage"
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maleike
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53221077e1bb Added operator=() overload and copy constructor for Statistics
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• grafa
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6e1f94472f5f Simplify case of unmasked hotspot calculation
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maleike
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b5c544731d74 Mark TODOs for further Statistics class work
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maleike
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44c80ab2bc78 Calculate mask correctly at image borders (shrink if outside image)
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maleike
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8f97a4ea63ec Add TODOs for 2D case ; decide for distance calculation
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maleike
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6f9f193d2b20 Mark TODOs for calculating statistics per-label
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maleike
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cc0e40ff294d Added use of get-functions in statisticsview
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• grafa
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18093e54c35c Struct Statistics is now a class with get- and set-functions
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• grafa
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8b7f22e5f2ea removed redundant code in hotspot test, statisticscalculator does now return…
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• grafa
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3277d71a63ec Calculate hotspot position
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maleike
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bd658fc31037 Update convolution image only when input has changed
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maleike
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4130aca9442a Add flags for modified input radius
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maleike
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ac27d30f72b3 Change Statistics members (HotspotPeakIndex->HotspotIndex)
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maleike
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c65e588937fe set the values for the normal distribution vector
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• kovacheva
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21aa6fabd73f maen value in each voxel instead of a value at a point
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• kovacheva
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c22421ed6b42 clear uncalled methods
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• kovacheva
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55f96f6e56e9 commented; adjusted spacing; labels for ROIs added
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• kovacheva
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fdddc2572ffb cut the sphere approximation when it crosses the image boundary
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• kovacheva
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985567829417 fix of recursion; allow new parameter "entireHotSpotInImage"
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• kovacheva
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13fe076bd0cf Added cuboid based subdivision of the sphere for analytical integration
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• kovacheva
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693af1b8d3e8 Documentation added; use ITK instead of C++ iterators instead
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• kovacheva
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2846f64a3281 Min/max calculation added; documentation extended
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• kovacheva
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Changes (111)

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Documentation/

doxygen.conf.in

Modules/

ImageStatistics/

Testing/

Data/

Hotspot_Case1_1_1.xml

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Hotspot_Case1_1_10.xml

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Hotspot_Case1_1_11.xml

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Hotspot_Case1_1_12.xml

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Hotspot_Case1_1_13.xml

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Hotspot_Case1_1_14.xml

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Hotspot_Case1_1_15.xml

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Hotspot_Case1_1_2.xml

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Hotspot_Case1_1_3.xml

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Hotspot_Case1_1_4.xml

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Hotspot_Case1_1_5.xml

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Hotspot_Case1_1_6.xml

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Hotspot_Case1_1_7.xml

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Hotspot_Case1_1_8.xml

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Hotspot_Case1_1_9.xml

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Hotspot_Case1_3_1.xml

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Hotspot_Case1_3_2.xml

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Hotspot_Case1_3_3.xml

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Hotspot_Case1_3_4.xml

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Hotspot_Case1_3_5.xml

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Hotspot_Case1_4_1.xml

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Hotspot_Case1_4_2.xml

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Hotspot_Case1_4_3.xml

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Hotspot_Case1_4_4.xml

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Hotspot_Case1_4_5.xml

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Hotspot_Case1_5_1.xml

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Hotspot_Case1_5_2.xml

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Hotspot_Case1_5_3.xml

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Hotspot_Case1_5_4.xml

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Hotspot_Case1_5_5.xml

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Hotspot_Case2_3_1.xml

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Hotspot_Case2_3_2.xml

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Hotspot_Case2_3_3.xml

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Hotspot_Case2_3_4.xml

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Hotspot_Case2_3_5.xml

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Hotspot_Case2_4_1.xml

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Hotspot_Case2_4_2.xml

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Hotspot_Case2_4_3.xml

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Hotspot_Case2_4_4.xml

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Hotspot_Case2_4_5.xml

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Hotspot_Case2_5_1.xml

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Hotspot_Case2_5_2.xml

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Hotspot_Case2_5_3.xml

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Hotspot_Case2_5_4.xml

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Hotspot_Case2_5_5.xml

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Hotspot_Case3_3_1.xml

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Hotspot_Case3_3_2.xml

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Hotspot_Case3_3_3.xml

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Hotspot_Case3_3_4.xml

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Hotspot_Case3_3_5.xml

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Hotspot_Case3_4_1.xml

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Hotspot_Case3_4_2.xml

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Hotspot_Case3_4_3.xml

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Hotspot_Case3_4_4.xml

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Hotspot_Case3_4_5.xml

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Hotspot_Case3_5_1.xml

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Hotspot_Case3_5_2.xml

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Hotspot_Case3_5_3.xml

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Hotspot_Case3_5_4.xml

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Hotspot_Case3_5_5.xml

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Hotspot_Case5_3_1.xml

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Hotspot_Case5_3_2.xml

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Hotspot_Case5_3_3.xml

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Hotspot_Case5_3_4.xml

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Hotspot_Case5_3_5.xml

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Hotspot_Case5_4_1.xml

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Hotspot_Case5_4_2.xml

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Hotspot_Case5_4_3.xml

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Hotspot_Case5_4_4.xml

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Hotspot_Case5_4_5.xml

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Hotspot_Case5_5_1.xml

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Hotspot_Case5_5_2.xml

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Hotspot_Case5_5_3.xml

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Hotspot_Case5_5_4.xml

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Hotspot_Case5_5_5.xml

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Hotspot_Case6_3_1.xml

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Hotspot_Case6_3_2.xml

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Hotspot_Case6_3_3.xml

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Hotspot_Case6_3_4.xml

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Hotspot_Case6_3_5.xml

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Hotspot_Case6_4_1.xml

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Hotspot_Case6_4_2.xml

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Hotspot_Case6_4_3.xml

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Hotspot_Case6_4_4.xml

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Hotspot_Case6_4_5.xml

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Hotspot_Case6_5_1.xml

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Hotspot_Case6_5_2.xml

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Hotspot_Case6_5_3.xml

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Hotspot_Case6_5_4.xml

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Hotspot_Case6_5_5.xml

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itkMultiGaussianImageSource.h

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itkMultiGaussianImageSource.hxx

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mitkImageStatisticsCalculatorTest.cpp

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mitkImageStatisticsHotspotTest.cpp

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mitkMultiGaussianTest.cpp

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convolutionkernelsupersampling.jpg

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hotspotexample.JPG

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mitkimagestatisticshotspottestcase1.jpg

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mitkimagestatisticshotspottestcase2.jpg

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mitkimagestatisticshotspottestcase3.jpg

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mitkimagestatisticshotspottestcase5.jpg

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mitkimagestatisticshotspottestcase6.jpg

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itkMultiGaussianImageSource.h

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itkMultiGaussianImageSource.hxx

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mitkImageStatisticsCalculator.cpp

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mitkImageStatisticsCalculator.h

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mitkImageStatisticsHotspotTest.dox

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mitkPointSetDifferenceStatisticsCalculator.cpp

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Plugins/

org.mitk.gui.qt.measurementtoolbox/

src/

internal/

QmitkImageStatisticsView.cpp

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rMITKb02e627d1b6b

Documentation/doxygen.conf.in

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Modules/ImageStatistics/Testing/Data/Hotspot_Case1_1_1.xml

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Modules/ImageStatistics/Testing/Data/Hotspot_Case2_3_1.xml

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Modules/ImageStatistics/Testing/Data/Hotspot_Case3_3_1.xml

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Modules/ImageStatistics/Testing/Data/Hotspot_Case6_3_1.xml

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Modules/ImageStatistics/Testing/Data/Hotspot_Case6_5_5.xml

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Modules/ImageStatistics/Testing/itkMultiGaussianImageSource.h

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Modules/ImageStatistics/Testing/itkMultiGaussianImageSource.hxx

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Modules/ImageStatistics/Testing/mitkImageStatisticsCalculatorTest.cpp

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Modules/ImageStatistics/Testing/mitkImageStatisticsHotspotTest.cpp

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Modules/ImageStatistics/Testing/mitkMultiGaussianTest.cpp

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Modules/ImageStatistics/images/convolutionkernelsupersampling.jpg

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Modules/ImageStatistics/images/hotspotexample.JPG

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Modules/ImageStatistics/images/mitkimagestatisticshotspottestcase1.jpg

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Modules/ImageStatistics/images/mitkimagestatisticshotspottestcase6.jpg

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Modules/ImageStatistics/itkMultiGaussianImageSource.h

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Modules/ImageStatistics/itkMultiGaussianImageSource.hxx

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Modules/ImageStatistics/mitkImageStatisticsCalculator.cpp

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Modules/ImageStatistics/mitkImageStatisticsCalculator.h

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Modules/ImageStatistics/mitkImageStatisticsHotspotTest.dox

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Modules/ImageStatistics/mitkPointSetDifferenceStatisticsCalculator.cpp

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Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.cpp

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