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Wed, Apr 7

k656s committed rKAAPANA425255116347: resolved some more conflicts (authored by k656s).
resolved some more conflicts
Wed, Apr 7, 11:20 AM
k656s committed rKAAPANA51f70c0a19d3: removed kaapana-jobs app (authored by k656s).
removed kaapana-jobs app
Wed, Apr 7, 11:20 AM
k656s committed rKAAPANAf1bccad8315f: Quick fix for annimation. It could be improved (when you clear more than one… (authored by m139l).
Quick fix for annimation. It could be improved (when you clear more than one…
Wed, Apr 7, 11:20 AM
k656s committed rKAAPANAe955eab3fc85: Airflow App is integrated in Kaapana. But there are some things to do: (authored by m139l).
Airflow App is integrated in Kaapana. But there are some things to do:
Wed, Apr 7, 11:20 AM
k656s committed rKAAPANA4bd04d74a303: Finished version ready for implementation in Kaapana. I cleared the artefacts… (authored by m139l).
Finished version ready for implementation in Kaapana. I cleared the artefacts…
Wed, Apr 7, 11:20 AM
k656s committed rKAAPANAd0810c48d567: Edited Kaapana API so the method 'getdagruns' return also the ID of the failed… (authored by m139l).
Edited Kaapana API so the method 'getdagruns' return also the ID of the failed…
Wed, Apr 7, 11:20 AM
k656s committed rKAAPANAdab78c1151ed: Edited Kaapana API so the method 'getdagruns' return also the ID of the failed… (authored by m139l).
Edited Kaapana API so the method 'getdagruns' return also the ID of the failed…
Wed, Apr 7, 11:20 AM
k656s committed rKAAPANAe635dc81dfa4: First steps with app. (authored by m139l).
First steps with app.
Wed, Apr 7, 11:20 AM
kalali edited projects for T27872: [Segmentation] Region Growing 3D GUI does not provide a "Overwrite" checkbox, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 11:12 AM · MITK (v2021.10), Restricted Project, Cleared
kalali edited projects for T18014: write tool interaction tests for segmentation, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 11:11 AM · MITK (v2021.10), Bugzilla
kalali edited projects for T28358: Data Manager context menu items added multiple times for multi-selections, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 11:03 AM · MITK (v2021.10)
kalali edited projects for T27711: Rename segmentation image selection label, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 11:02 AM · MITK (v2021.10)
kalali edited projects for T28181: [Segmentation] Should warning messages be passed on to the UI?, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 11:01 AM · MITK (v2021.10), Request for Discussion
kalali edited projects for T27713: [Segmentation] Disable "New" button when no image is selected, added: MITK (v2021.10); removed MITK.
Wed, Apr 7, 11:00 AM · MITK (v2021.10), Request for Discussion
kalali updated subscribers of T26878: Opacity / transparency of a data node cannot be changed anymore.

Does not seem to happen anymore. Can somebody confirm, e.g. @kislinsk?

Wed, Apr 7, 10:59 AM · MITK
floca edited projects for T28275: [Segmentation] AdaptiveRegionGrowingTool must be refactored / 4D Segmentation returns error message when point is not on the correct timestep, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 10:55 AM · MITK (v2021.10)
floca edited projects for T28262: TimeGeometry inconsistent documentation and implementation of time bounds and checks, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 10:53 AM · MITK (v2021.10), Request for Discussion
floca edited projects for T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 10:52 AM · MITK (v2021.10), Missing Info, Restricted Project
floca edited projects for T28247: [Segmentation] Watershed tool freezes when slider and threshold are set to a low value, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 10:51 AM · MITK (v2021.10), Request for Discussion
schererj committed rKAAPANA035b425481d7: Airlfow Dockerfile fix (authored by schererj).
Airlfow Dockerfile fix
Wed, Apr 7, 10:34 AM
schererj committed rKAAPANA61d634ce83fa: Airflow requests issue (authored by schererj).
Airflow requests issue
Wed, Apr 7, 10:08 AM
schererj committed rKAAPANAa8eeb1ec3e52: Dockerfile adjustments (authored by schererj).
Dockerfile adjustments
Wed, Apr 7, 10:02 AM
schererj committed rKAAPANA60923eb502dd: adjusted build-script (authored by schererj).
adjusted build-script
Wed, Apr 7, 9:41 AM
schererj committed rKAAPANA6cb862b700d0: adjusted build-script (authored by schererj).
adjusted build-script
Wed, Apr 7, 9:40 AM
schererj committed rKAAPANA87eea58285f9: airflow dependency adjustments (authored by schererj).
airflow dependency adjustments
Wed, Apr 7, 9:36 AM
kislinsk edited projects for T28039: DICOM Seg loading error, added: MITK (v2021.10); removed Next Milestone, MITK, Missing Info, Request for Discussion.
Wed, Apr 7, 9:14 AM · MITK (v2021.10)
kislinsk edited projects for T24398: Dicom plugin: Retrieve does not work, added: MITK (v2021.10); removed Next Milestone, MITK.
Wed, Apr 7, 9:12 AM · MITK (v2021.10)
kleina added a comment to T28356: MITK v2021.02 does not recognize loaded mask as segmentation.

Sorry, I was on vacation.

Wed, Apr 7, 9:03 AM · Next Milestone, MITK
schererj committed rKAAPANA20bb5ec7602a: docker container import improvements (authored by schererj).
docker container import improvements
Wed, Apr 7, 1:13 AM
schererj committed rKAAPANA5b623f2c4533: docs adjustments (authored by schererj).
docs adjustments
Wed, Apr 7, 1:09 AM
schererj committed rKAAPANA0a0a872caaac: docs adjustments (authored by schererj).
docs adjustments
Wed, Apr 7, 1:02 AM
schererj committed rKAAPANA84728d0f538e: docs adjustments (authored by schererj).
docs adjustments
Wed, Apr 7, 1:00 AM

Tue, Apr 6

schererj committed rKAAPANA28894894b9c1: ensemble dir fix (authored by schererj).
ensemble dir fix
Tue, Apr 6, 10:05 PM
schererj committed rKAAPANAb1c8ed254c69: build and push all charts refactoring (authored by schererj).
build and push all charts refactoring
Tue, Apr 6, 10:03 PM
schererj committed rKAAPANA2787a69d4dcb: removed registry_project from repo (authored by schererj).
removed registry_project from repo
Tue, Apr 6, 6:17 PM
schererj committed rKAAPANAdb3737c0bf59: docker build script fix (authored by schererj).
docker build script fix
Tue, Apr 6, 5:43 PM
schererj committed rKAAPANA9288ce5d7ecc: PullPolicy fix (authored by schererj).
PullPolicy fix
Tue, Apr 6, 5:09 PM
kislinsk edited projects for T27432: Error loading DCE-MRI DICOM image, added: MITK (v2021.10); removed MITK, Next Milestone.
Tue, Apr 6, 4:29 PM · MITK (v2021.10), DICOM, Cleared
kislinsk closed T28263: [2-d surface mapper] Surface is drawn in every time step even if it has limited time bounds as Resolved.
Tue, Apr 6, 4:28 PM · MITK (v2021.02)
kislinsk added a comment to T27413: MITK 2020 Workflow Q&A.

We now have some manuals but we still need an example-based guide for reviews/Arcanist.

Tue, Apr 6, 4:24 PM · MITK (v2021.10)
kislinsk updated the task description for T27413: MITK 2020 Workflow Q&A.
Tue, Apr 6, 4:23 PM · MITK (v2021.10)
kislinsk edited projects for T27701: Overhaul or remove PluginGenerator, added: MITK (v2021.10); removed MITK, Next Milestone.
Tue, Apr 6, 4:21 PM · MITK (v2021.10)
kislinsk lowered the priority of T27578: 2021.1 Linux installer does not work on Fedora from Unbreak Now! to High.
Tue, Apr 6, 4:21 PM · MITK (v2021.10)
kislinsk edited projects for T28172: Include MITK-ProjectTemplate in MITK Differential builds, added: MITK (v2021.10); removed Next Milestone, MITK.
Tue, Apr 6, 4:12 PM · MITK (v2021.10), CI
kislinsk edited projects for T28422: Multilabel color map does not produce unique colors, added: MITK (v2021.10); removed MITK.
Tue, Apr 6, 4:12 PM · MITK (v2021.10)
kislinsk edited projects for T28421: Use whole image grey value must always be executed when switching colormap to 'Multilabel', added: MITK (v2021.10); removed MITK.
Tue, Apr 6, 4:11 PM · MITK (v2021.10)
kislinsk added a hashtag to MITK (v2021.10): #mitk-2021-10.
Tue, Apr 6, 4:11 PM
schererj committed rKAAPANA594c2c5366ce: added readme to ensemble container (authored by schererj).
added readme to ensemble container
Tue, Apr 6, 3:12 PM
schererj committed rKAAPANAe7ad74514a93: ensemble container fix (authored by schererj).
ensemble container fix
Tue, Apr 6, 3:06 PM
schererj committed rKAAPANA4446678acced: new docs layout (authored by schererj).
new docs layout
Tue, Apr 6, 3:04 PM
berker updated berker.
Tue, Apr 6, 2:07 PM
schererj committed rKAAPANA425e8415cfe7: getting_started docs adjustments (authored by schererj).
getting_started docs adjustments
Tue, Apr 6, 2:02 PM
schererj committed rKAAPANA38257d3634de: Merge branch 'develop' of https://phabricator.mitk.org/source/kaapana into… (authored by schererj).
Merge branch 'develop' of https://phabricator.mitk.org/source/kaapana into…
Tue, Apr 6, 1:45 PM
schererj committed rKAAPANAa318b025eacd: getting_started docs adjustments (authored by schererj).
getting_started docs adjustments
Tue, Apr 6, 1:45 PM
gaoh committed rKAAPANAb5003f1da588: removed bug: enable GPU if true, not false (authored by gaoh).
removed bug: enable GPU if true, not false
Tue, Apr 6, 12:55 PM
menjivar moved T28034: Deep Learning for Sepsis Classification on Parameter Images from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Tue, Apr 6, 12:12 PM · Restricted Project
kislinsk triaged T28421: Use whole image grey value must always be executed when switching colormap to 'Multilabel' as High priority.
Tue, Apr 6, 12:48 AM · MITK (v2021.10)
kislinsk triaged T28422: Multilabel color map does not produce unique colors as High priority.
Tue, Apr 6, 12:46 AM · MITK (v2021.10)
kislinsk created MITK (v2021.10).
Tue, Apr 6, 12:41 AM
kislinsk triaged T28428: Re-enable code coverage testing in MITK CI as Normal priority.
Tue, Apr 6, 12:40 AM · CI, MITK

Fri, Apr 2

kalali added a project to T28428: Re-enable code coverage testing in MITK CI: CI.
Fri, Apr 2, 11:08 AM · CI, MITK

Thu, Apr 1

p212r committed rKAAPANA1462ba9febf0: OHIF add workaround for compatibility with dcm4chee v5.23 (authored by p212r).
OHIF add workaround for compatibility with dcm4chee v5.23
Thu, Apr 1, 5:53 PM
nolden created T28428: Re-enable code coverage testing in MITK CI.
Thu, Apr 1, 2:04 PM · CI, MITK
menjivar closed T28032: Data visualization as Resolved.
Thu, Apr 1, 12:30 PM · Restricted Project
s669m lowered the priority of T28402: gvisor pods are crashing (CrashLoopBackOff) from Normal to Low.
Thu, Apr 1, 10:16 AM · Request for Discussion, Kaapana (internal)
s669m moved T28402: gvisor pods are crashing (CrashLoopBackOff) from In Progress to Resolved on the Kaapana (internal) board.
Thu, Apr 1, 10:16 AM · Request for Discussion, Kaapana (internal)
s669m moved T28426: gvisor pods unable to access internet ? Proxy issues ?? from In Progress to Resolved on the Kaapana (internal) board.
Thu, Apr 1, 10:15 AM · Request for Discussion, Kaapana (internal)
s669m moved T28426: gvisor pods unable to access internet ? Proxy issues ?? from Discussion to In Progress on the Kaapana (internal) board.
Thu, Apr 1, 10:04 AM · Request for Discussion, Kaapana (internal)
s669m lowered the priority of T28426: gvisor pods unable to access internet ? Proxy issues ?? from Normal to Low.
Thu, Apr 1, 8:28 AM · Request for Discussion, Kaapana (internal)
schererj committed rKAAPANA43805820f43c: extensions improvements (authored by schererj).
extensions improvements
Thu, Apr 1, 1:14 AM
schererj committed rKAAPANA3df293ca2b6a: extensions improvements (authored by schererj).
extensions improvements
Thu, Apr 1, 1:05 AM

Wed, Mar 31

schererj committed rKAAPANA03e8ff18432d: extensions auto-update (authored by schererj).
extensions auto-update
Wed, Mar 31, 6:22 PM
schererj committed rKAAPANAaf74048b97f5: extensions cache startup fix (authored by schererj).
extensions cache startup fix
Wed, Mar 31, 12:54 PM
schererj committed rKAAPANA7a5314dbabda: adjusted build-system and platform installer to oci-installation (authored by schererj).
adjusted build-system and platform installer to oci-installation
Wed, Mar 31, 12:44 PM
s669m added a comment to T28387: Testing Gvisor with Kube8s.

Created a bug in google gvisor, and one guy is helping us.

Wed, Mar 31, 12:18 PM · Restricted Project
s669m triaged T28426: gvisor pods unable to access internet ? Proxy issues ?? as Normal priority.
Wed, Mar 31, 12:10 PM · Request for Discussion, Kaapana (internal)
schererj committed rKAAPANA56dba406bdab: extensions initial cache issue fix (authored by schererj).
extensions initial cache issue fix
Wed, Mar 31, 11:20 AM
schererj committed rKAAPANA4a51874a3548: Merge branch 'feature/node-uid' into develop (authored by schererj).
Merge branch 'feature/node-uid' into develop
Wed, Mar 31, 10:55 AM
schererj committed rKAAPANA747fa276f9f2: extensions caching test (authored by schererj).
extensions caching test
Wed, Mar 31, 10:54 AM
schererj committed rKAAPANA234bf48a2b1f: downgrade Dcm4chee to v5.22.4, fixed caching for mitk-flow and mitk-workbench… (authored by schererj).
downgrade Dcm4chee to v5.22.4, fixed caching for mitk-flow and mitk-workbench…
Wed, Mar 31, 10:54 AM
schererj committed rKAAPANAb4d89c82561f: platform upgrade fix (authored by schererj).
platform upgrade fix
Wed, Mar 31, 10:54 AM
schererj committed rKAAPANA35bcd17287ce: OHIF update to 4.9.7 & installation + upgrade from Gitlab (authored by schererj).
OHIF update to 4.9.7 & installation + upgrade from Gitlab
Wed, Mar 31, 10:54 AM
schererj committed rKAAPANAce9b27ec7b8c: airflow update to v1.10.5 (authored by schererj).
airflow update to v1.10.5
Wed, Mar 31, 10:54 AM
schererj committed rKAAPANA63c97f362c7b: dice change (authored by schererj).
dice change
Wed, Mar 31, 10:54 AM
schererj committed rKAAPANA248a64dafac3: dice calc adjustments (authored by schererj).
dice calc adjustments
Wed, Mar 31, 10:54 AM
schererj committed rKAAPANAff42f92d895d: nnunet ensemble evaluation adjustments (authored by schererj).
nnunet ensemble evaluation adjustments
Wed, Mar 31, 10:54 AM
s522r added a member for MIC: d246a.
Wed, Mar 31, 10:21 AM
thomass added a comment to T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior.

Pushed new branch to rMITK MITK: feature/T28406-PatchForTestingLiveWireBehavior.

Wed, Mar 31, 9:40 AM · MITK
thomass claimed T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior.
Wed, Mar 31, 9:30 AM · MITK
thomass added a comment to T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior.

First patch to change following behavior (for user testing only):

  • The linesegments are added with each mouseclick of the users without the cost function but by connecting start and endpoint
  • If the user double-clicks on the image, the last point is connected with the first adding an additional segment.
Wed, Mar 31, 9:20 AM · MITK

Tue, Mar 30

m564f committed rKAAPANA6449be828ada: added dag to reload workflows model directory from minio (authored by m564f).
added dag to reload workflows model directory from minio
Tue, Mar 30, 3:06 PM
m564f committed rKAAPANA13e793858320: added operator to trigger other (remote) dag (authored by m564f).
added operator to trigger other (remote) dag
Tue, Mar 30, 3:06 PM
paul jaeger <p.jaeger@dkfz.de> committed rREGRCNNfac483a45dfb: update requirements (authored by paul jaeger <p.jaeger@dkfz.de>).
update requirements
Tue, Mar 30, 1:56 PM
paul jaeger <p.jaeger@dkfz.de> committed rMDTPUBLICd0d880465937: update pillow requirement (authored by paul jaeger <p.jaeger@dkfz.de>).
update pillow requirement
Tue, Mar 30, 1:54 PM
k656s committed rKAAPANA3719b7957330: Merge branch 'feature/gitlab-integration' into develop (authored by k656s).
Merge branch 'feature/gitlab-integration' into develop
Tue, Mar 30, 12:01 PM
k656s committed rKAAPANA3c80227a08b4: created extensions dependencies files, smaller fixes (authored by k656s).
created extensions dependencies files, smaller fixes
Tue, Mar 30, 11:53 AM
k656s committed rKAAPANAb0f5416252bb: updated sql requirement in airflow file (authored by k656s).
updated sql requirement in airflow file
Tue, Mar 30, 11:53 AM
k656s committed rKAAPANA004d332491f8: added extensions manager and core extensions (authored by k656s).
added extensions manager and core extensions
Tue, Mar 30, 11:53 AM
k656s committed rKAAPANA60cf958052c3: updated installer script to install from docker registry (authored by k656s).
updated installer script to install from docker registry
Tue, Mar 30, 11:53 AM
s434n triaged T28424: Increase consistentcy of RT dose iso-color preset customization as Low priority.
Tue, Mar 30, 9:48 AM · MITK