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Today

sattler committed rMITK881636b85baf: Merge branch 'T26658-Transducers_smallFix' (authored by sattler).
Merge branch 'T26658-Transducers_smallFix'
Wed, Sep 18, 1:01 PM
sattler committed rMITK200cddfe5017: Merge branch 'T26658-Transducers_smallFix' (authored by sattler).
Merge branch 'T26658-Transducers_smallFix'
Wed, Sep 18, 11:59 AM
sattler added a comment to T26658: Implement beamforming in MITK for curved transducers.

Pushed new branch T26658-Transducers_smallFix.

Wed, Sep 18, 11:58 AM · MITK, Photoacoustics
eisenman added a comment to T26687: Export annotation center points in pixel coordinates.

Pushed new branch T26687-ExportPixelCoordinates.

Wed, Sep 18, 11:21 AM · Restricted Project, CAMI
eisenman triaged T26687: Export annotation center points in pixel coordinates as High priority.
Wed, Sep 18, 11:14 AM · Restricted Project, CAMI

Yesterday

kirchnth added a comment to T26683: make ippai modularerer.

nvmd about making deeplearning dependencies optional - seems like this is not practical

Tue, Sep 17, 3:42 PM · CAMI, Photoacoustics
floca updated subscribers of T26158: Perfomance loss due to intense (time)geometry clonig.
Tue, Sep 17, 2:51 PM · MITK
kirchnth triaged T26683: make ippai modularerer as Normal priority.
Tue, Sep 17, 2:34 PM · CAMI, Photoacoustics

Mon, Sep 16

steint committed rMDabb6db005263: Add partially out of image planar figures for cropped image (authored by steint).
Add partially out of image planar figures for cropped image
Mon, Sep 16, 1:55 PM
sattler committed rMITKb2e55c4ac4f3: Merge branch 'T26658-Transducers' (authored by sattler).
Merge branch 'T26658-Transducers'
Mon, Sep 16, 1:46 PM
kausch committed rMITKb3703dc098ef: Merge branch 'T19683-ShowOnlySelectedNodesSecondLevel' (authored by kausch).
Merge branch 'T19683-ShowOnlySelectedNodesSecondLevel'
Mon, Sep 16, 10:08 AM

Fri, Sep 13

kalali committed rMITK1909c0b1d590: Fix for float / double level and window values (authored by kalali).
Fix for float / double level and window values
Fri, Sep 13, 3:46 PM
eisenman triaged T26675: Logging of absolute time stamps is not possible as Normal priority.
Fri, Sep 13, 3:19 PM · IGT, MITK
kalali committed rMITKdcc1cbfeb418: Fix last time step access for data with arbitrary time geometry (authored by kalali).
Fix last time step access for data with arbitrary time geometry
Fri, Sep 13, 1:13 PM
steint triaged T26674: Statistics calculation crashes for planar figure size covering less than half a voxel as Normal priority.
Fri, Sep 13, 11:45 AM · MITK
kausch added a comment to T19683: "Show only selected node" changes the visibility of crosshair.

Pushed new branch T19683-ShowOnlySelectedNodesSecondLevel.

Fri, Sep 13, 10:44 AM · Bugzilla, Pull Request, MITK

Thu, Sep 12

kislinsk added a comment to T26427: Support software rendering.

Side note: https://fdossena.com does provide 64-bit build now.

Thu, Sep 12, 1:00 PM · MITK (2018-04-4)
kislinsk changed the visibility for F1437698: bitmap.png.
Thu, Sep 12, 11:26 AM

Wed, Sep 11

aguilera removed a watcher for OP 4.1: aguilera.
Wed, Sep 11, 5:19 PM
aguilera added a watcher for OP 4.1: aguilera.
Wed, Sep 11, 5:19 PM
kleina added a member for Deep Learning: graf.
Wed, Sep 11, 10:52 AM

Tue, Sep 10

schelb committed rPROUNETe831f79a3c74: code (authored by schelb).
code
Tue, Sep 10, 3:31 PM
schelb committed rPROUNET81b36fa47264: Updates (authored by schelb).
Updates
Tue, Sep 10, 3:26 PM

Mon, Sep 9

kalali added a member for SIDT: j762e.
Mon, Sep 9, 3:18 PM
kislinsk added a comment to T26653: Github pull request 263 (Forward vtkInformation objects to MITK mappers - allow for VTK depth peeling).

Cool! 👍🏻
Will look into this on Community Day.

Mon, Sep 9, 12:03 PM · MITK (2018-04-4), Noteworthy, Pull Request
kislinsk triaged T26653: Github pull request 263 (Forward vtkInformation objects to MITK mappers - allow for VTK depth peeling) as Normal priority.
Mon, Sep 9, 11:58 AM · MITK (2018-04-4), Noteworthy, Pull Request
kislinsk triaged T26654: Github pull request 239 (Check filename for invalid characters before saving e.g. "a:b.obj") as Normal priority.

Requested code changes in pull request.

Mon, Sep 9, 11:56 AM · MITK (2018-04-4), Pull Request
kislinsk placed T26427: Support software rendering up for grabs.
Mon, Sep 9, 11:39 AM · MITK (2018-04-4)
kislinsk closed T26655: Github pull request 237 (Gizmo fix: avoid double emission of Modified() signal) as Resolved.

Merged into releases/2018-04.

Mon, Sep 9, 11:38 AM · MITK (2018-04-4), Pull Request
kislinsk added a comment to T26655: Github pull request 237 (Gizmo fix: avoid double emission of Modified() signal).

Pushed new branch T26655-GizmoFix.

Mon, Sep 9, 11:37 AM · MITK (2018-04-4), Pull Request
kislinsk triaged T26655: Github pull request 237 (Gizmo fix: avoid double emission of Modified() signal) as Low priority.
Mon, Sep 9, 11:37 AM · MITK (2018-04-4), Pull Request
kislinsk triaged T26656: Gitlab pull request 238 (Avoid collapsing 'Properties' view when editing child-properties (e.g. "material.something")) as Low priority.

Not yet working. Tree doesn't collapse only the first time.

Mon, Sep 9, 11:34 AM · MITK (2018-04-4), Pull Request
bonekamp committed rPROUNETb3b2b5e8d6f3: change LGPL3 to GPL3 (authored by bonekamp).
change LGPL3 to GPL3
Mon, Sep 9, 10:49 AM
kompan added a member for SIDT: c082x.
Mon, Sep 9, 10:41 AM

Fri, Sep 6

floca added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

Apologies, but I am not sure I understand your first questions, but given your last statement:

No problem. A now fixed typo made it hard to understand.

Fri, Sep 6, 9:26 PM · MITK (2018-04-4)
kausch added a comment to T19683: "Show only selected node" changes the visibility of crosshair.

Yes, unfortunately the current solution only works for first level.

Fri, Sep 6, 9:58 AM · Bugzilla, Pull Request, MITK

Thu, Sep 5

tan14007 merged task T26666: Deprecation of QObject::trUtf8 in "Modules/AppUtil/src/QmitkSafeNotify.h" into T26643: Compilation errors (QT5): "error: 'trUtf8' is deprecated".
Thu, Sep 5, 7:39 AM · MITK
tan14007 merged T26666: Deprecation of QObject::trUtf8 in "Modules/AppUtil/src/QmitkSafeNotify.h" into T26643: Compilation errors (QT5): "error: 'trUtf8' is deprecated".
Thu, Sep 5, 7:39 AM · MITK
tan14007 updated the task description for T26666: Deprecation of QObject::trUtf8 in "Modules/AppUtil/src/QmitkSafeNotify.h".
Thu, Sep 5, 6:28 AM · MITK
tan14007 updated the task description for T26666: Deprecation of QObject::trUtf8 in "Modules/AppUtil/src/QmitkSafeNotify.h".
Thu, Sep 5, 6:27 AM · MITK
tan14007 updated the task description for T26666: Deprecation of QObject::trUtf8 in "Modules/AppUtil/src/QmitkSafeNotify.h".
Thu, Sep 5, 6:24 AM · MITK
tan14007 triaged T26666: Deprecation of QObject::trUtf8 in "Modules/AppUtil/src/QmitkSafeNotify.h" as Low priority.
Thu, Sep 5, 6:21 AM · MITK

Wed, Sep 4

bonekamp committed rPROUNET5684aeebf714: license change to GPLv3 (authored by bonekamp).
license change to GPLv3
Wed, Sep 4, 12:02 PM

Tue, Sep 3

kalali added a comment to T19683: "Show only selected node" changes the visibility of crosshair.

I experienced a problem with that approach:
I have an image with many segmentation nodes as child nodes. If I want to hide all segmentation nodes except for one (using "show only selected node") it does not hide all other segmentation nodes because they are not on the first level.

Tue, Sep 3, 6:48 PM · Bugzilla, Pull Request, MITK
kalali reopened T16153: Jump to center of mass of segmentation on click as "Open".

I'm currently using this inside the semantic relations plugin and I'm thinking about moving the functionality to the data manager context menu or similar.

Tue, Sep 3, 12:36 PM · Request for Discussion, Bugzilla, MITK
kalali reopened T16153: Jump to center of mass of segmentation on click, a subtask of T15696: implement a multi-label segmentation functionality, as Open.
Tue, Sep 3, 12:36 PM · Bugzilla, MITK
onogur added a member for CAMI: heckmann.
Tue, Sep 3, 10:17 AM
alenauus closed T26643: Compilation errors (QT5): "error: 'trUtf8' is deprecated" as Resolved.
Tue, Sep 3, 10:00 AM · MITK

Mon, Sep 2

kalali added a comment to T26496: [mxn multi widget] Re-initializations reset all render windows.
  • creating a new segmentation via the segmentation view

Has been disabled for the BlackSwan Demo. A "re-initialize selected nodes" button has been added, which will reinitialize the geometry of both selected nodes only inside the currently active render window.

Mon, Sep 2, 5:17 PM · Restricted Project, MITK
kalali added a member for SIDT: graf.
Mon, Sep 2, 3:57 PM
kislinsk changed the "Default Edit Policy" policy for application Diffusion from "Administrators" to "Custom Policy".
Mon, Sep 2, 11:02 AM

Fri, Aug 30

kalali added a comment to T25583: Dynamically customize different context menus.

This is also necessary if a context menu action is defined within another plugin, which uses additional module-dependencies.

Fri, Aug 30, 6:58 PM · MITK
sattler added a comment to T26588: Integration of ilib python library.

Pushed new branch T26588-cleanup.

Fri, Aug 30, 5:22 PM · CAMI, Photoacoustics
eisenman closed T26629: Workbench in inconsistent state after trying to save a tool storage file with insufficient permissions as Resolved.
Fri, Aug 30, 5:13 PM · IGT, MITK
eisenman committed rMITK670899eab0ac: Merge branch 'T26629-HandleIGTIOExceptionWhenSavingToolStorage' (authored by eisenman).
Merge branch 'T26629-HandleIGTIOExceptionWhenSavingToolStorage'
Fri, Aug 30, 5:11 PM
eisenman added a comment to T26629: Workbench in inconsistent state after trying to save a tool storage file with insufficient permissions.

Pushed new branch T26629-HandleIGTIOExceptionWhenSavingToolStorage.

Fri, Aug 30, 5:05 PM · IGT, MITK
kalali updated the task description for T26496: [mxn multi widget] Re-initializations reset all render windows.
Fri, Aug 30, 4:42 PM · Restricted Project, MITK
eisenman claimed T26629: Workbench in inconsistent state after trying to save a tool storage file with insufficient permissions.
Fri, Aug 30, 3:01 PM · IGT, MITK
sridhara closed T26611: Edit tool tip function in IGT Tracking doesn't apply the correction as Resolved.
Fri, Aug 30, 2:48 PM · Restricted Project, MITK
sridhara committed rMITK599a6b77a017: Merge branch 'T26611-EditToolTip_in_IGT-TrackingToolBox_not_working' (authored by sridhara).
Merge branch 'T26611-EditToolTip_in_IGT-TrackingToolBox_not_working'
Fri, Aug 30, 2:48 PM
kalali added a comment to T26276: Segmentation created for multiple timepoints on 3D+t images.

Will be solved if D214 is accepted and merged.

Fri, Aug 30, 2:44 PM · MITK (2018-04-4)
kalali added a revision to T24766: Last time step of 3D+t data with arbitrary time geometry not selectable by image navigator spinbox: Unknown Object (Differential Revision).
Fri, Aug 30, 2:39 PM · MITK
eisenman triaged T26661: Webcam cannot be activated in Ultrasound Support on Linux as Normal priority.
Fri, Aug 30, 2:36 PM · IGT, MITK
kalali added a comment to T24766: Last time step of 3D+t data with arbitrary time geometry not selectable by image navigator spinbox.

Pushed new branch T24766-Fix-last-time-step-access.

Fri, Aug 30, 2:31 PM · MITK
seitela added a comment to T26611: Edit tool tip function in IGT Tracking doesn't apply the correction.

Looks like one solution to the problem. For the other tracking devices, however it seems to be solved by adding the line

Fri, Aug 30, 1:22 PM · Restricted Project, MITK
sridhara updated subscribers of T26611: Edit tool tip function in IGT Tracking doesn't apply the correction.

@eisenman @seitela Fixed this bug. Can i go ahead and merge it?

Fri, Aug 30, 12:07 PM · Restricted Project, MITK
sridhara added a comment to T26611: Edit tool tip function in IGT Tracking doesn't apply the correction.

Pushed new branch T26611-EditToolTip_in_IGT-TrackingToolBox_not_working.

Fri, Aug 30, 12:06 PM · Restricted Project, MITK
kleina added a member for Deep Learning: t543a.
Fri, Aug 30, 9:49 AM

Thu, Aug 29

sattler added a comment to T26658: Implement beamforming in MITK for curved transducers.

Pushed new branch T26658-Transducers.

Thu, Aug 29, 5:56 PM · MITK, Photoacoustics
sattler closed T26060: Command-line interface for PhotoacousticsAlgorithms as Resolved.
Thu, Aug 29, 5:00 PM · MITK, Photoacoustics
sattler triaged T26658: Implement beamforming in MITK for curved transducers as Normal priority.
Thu, Aug 29, 4:59 PM · MITK, Photoacoustics
jsolislemus added a comment to T26451: DICOM plugin cannot parse DICOM directories in macOS installer.

Apologies for the delay in response..

Thu, Aug 29, 3:23 PM · MITK (2018-04-4)
steint committed rMITKda74b8a7fb07: Merge branch 'T26657-fix-picker-spacing' (authored by steint).
Merge branch 'T26657-fix-picker-spacing'
Thu, Aug 29, 11:17 AM

Wed, Aug 28

steint committed rMITK237478713b2b: Merge branch 'T26657-fix-picker-spacing' (authored by steint).
Merge branch 'T26657-fix-picker-spacing'
Wed, Aug 28, 3:32 PM
steint closed T26657: TubeGraph Picker does not consider image spacing as Resolved.
Wed, Aug 28, 3:32 PM · MITK
steint added a comment to T26657: TubeGraph Picker does not consider image spacing.

Pushed new branch T26657-fix-picker-spacing.

Wed, Aug 28, 3:30 PM · MITK
steint triaged T26657: TubeGraph Picker does not consider image spacing as Normal priority.
Wed, Aug 28, 3:28 PM · MITK
maleike added a project to T26653: Github pull request 263 (Forward vtkInformation objects to MITK mappers - allow for VTK depth peeling): Noteworthy.
Wed, Aug 28, 2:42 PM · MITK (2018-04-4), Noteworthy, Pull Request
maleike created T26656: Gitlab pull request 238 (Avoid collapsing 'Properties' view when editing child-properties (e.g. "material.something")).
Wed, Aug 28, 2:39 PM · MITK (2018-04-4), Pull Request
maleike assigned T26655: Github pull request 237 (Gizmo fix: avoid double emission of Modified() signal) to kislinsk.
Wed, Aug 28, 2:38 PM · MITK (2018-04-4), Pull Request
maleike created T26655: Github pull request 237 (Gizmo fix: avoid double emission of Modified() signal).
Wed, Aug 28, 2:38 PM · MITK (2018-04-4), Pull Request
maleike created T26654: Github pull request 239 (Check filename for invalid characters before saving e.g. "a:b.obj").
Wed, Aug 28, 2:37 PM · MITK (2018-04-4), Pull Request
maleike created T26653: Github pull request 263 (Forward vtkInformation objects to MITK mappers - allow for VTK depth peeling).
Wed, Aug 28, 2:35 PM · MITK (2018-04-4), Noteworthy, Pull Request
mindrocf added a member for OP 4.1: aguilera.
Wed, Aug 28, 10:24 AM

Tue, Aug 27

kalali added a comment to T25804: Set 'selected' property when using the new selection concept.

Another idea would be to use our QmitkSelectionServiceConnector to connect the service bus with a slot of the level window manager / level window widget, such that each selection is noticed by the level window slider and the context menu can access the currently selected data nodes.
I looked into the implementation and I think this is something we can do, given the code that we have.
However, I support the idea of rethinking and redesigning the level window manager (resp. level window widget). There are a lot of conditions and checks which make the class complex and error-prone.

Tue, Aug 27, 6:40 PM · MITK
kalali added a comment to T25804: Set 'selected' property when using the new selection concept.

Pushed new branch T25804-Level-window-manager-as-selection-service-listener.

Tue, Aug 27, 6:38 PM · MITK
metzger closed T25412: MitkDICOMQIIO is not built as Resolved.
Tue, Aug 27, 4:39 PM · MITK
metzger closed T20103: Improve usability of multilabel segmentation plugin as Resolved.
Tue, Aug 27, 4:38 PM · MITK
metzger closed T23362: Load DICOM PM (Parametric Maps) in MITK as Invalid.
Tue, Aug 27, 4:38 PM · MITK
metzger closed T23362: Load DICOM PM (Parametric Maps) in MITK, a subtask of T23337: Load DICOM SR in MITK, as Invalid.
Tue, Aug 27, 4:38 PM · MICO (Demo_MICCAI_2017), MITK
metzger closed T23337: Load DICOM SR in MITK as Invalid.
Tue, Aug 27, 4:37 PM · MICO (Demo_MICCAI_2017), MITK
metzger placed T25192: Enable DICOM SEG conversion for nrrd segmentations up for grabs.
Tue, Aug 27, 4:37 PM · MICO (Demo MICCAI 2018), MITK
metzger closed T23340: Wiki page for DICOM QI in MITK as Wontfix.

See E130-Projekte\MITK-Docs\MITK Schulung\2017 - MICCAI\DICOM_SEG_Gitbook

Tue, Aug 27, 4:33 PM · MICO (Demo MICCAI 2018)
kalali added a comment to T18403: Apply current shown level window setting to all selected images.

see T25483: different approach though: The idea is to change the level window slider while the "selected nodes" mode is enabled. This way, the level window will be applied to to all selected data nodes automatically and simultaneously.
The approach proposed here sounds more like using a node which has already a set LW and "propagating" this LW to different nodes (subsequently). I linked this task as we could discuss if this is something we want to have this feature additionally.

Tue, Aug 27, 3:43 PM · Bugzilla, MITK

Mon, Aug 26

hettich added a comment to T25535: DCMTK won't build if Anaconda is installed.

Speculating:
Maybe that was a bash environment side effect, i cannot reproduce this error on my GNU/Linux system where I use tcsh instead of bash.
The tcsh environment does not contain anything "conda" related, while bash does, if (ana|mini)conda is installed.

Mon, Aug 26, 4:18 PM · MITK
kalali added a comment to T24356: Rework mouse mode switcher.

There are several things to point out here:

  • We could split the class into a real mouse mode switcher that only changes the mouse mode .xml-config file for a new mouse mode.

A new class has been introduced that handles all basic MITK- and PACS- interaction .xml-files in T24357.

Mon, Aug 26, 3:41 PM · MITK
kalali added a comment to T24357: Rework mitkMouseModeSwitcher.

Has been solved on top of T26476.
This task will be closed if everything is merged to master and tested (wait for D212).

Mon, Aug 26, 3:34 PM · MITK
kalali added a comment to T24357: Rework mitkMouseModeSwitcher.

Pushed new branch T24357-Remove-MouseModeSwitcher.

Mon, Aug 26, 3:34 PM · MITK
kalali added a comment to T24357: Rework mitkMouseModeSwitcher.

A new class, the InteractionSchemeSwitcher has already been introduced in 9ab09bff137b. This class is used as a replacement for the MouseModeSwitcher. It it a simplified and cleaned version which reduces the responsibilities of the class: The service registration has been removed and is now done inside QmitkAbstractMultiWidget and DisplayActionEventBroadcast.
Additionally, the scheme switcher is adjusted to match the new scheme config files (see T24368): There is no difference anymore between a mouse mode and an interaction scheme (see T24368).
The new scheme switcher is used within the QmitkInteractionScheme and is currently tested with the QmitkAbstractMultiWidget.

Mon, Aug 26, 1:53 PM · MITK
kalali added a comment to T24358: Rework QmitkMouseModeSwitcher.

Has been solved on top of T26476.
This task will be closed if everything is merged to master and tested (wait for D212).

Mon, Aug 26, 12:45 PM · MITK