Pushed new branch feature/T27564-integrate-deeplearning-segmentation-evaluation.

Thanks for the report. I renamed the task to an actual task as the documentation you are referring to seems not up-to-date regarding ModuleList.cmake. For questions, though, please use the #help-mitk Slack channel or the mitk-users mailing list (public).

Pushed new branch feature/T27605-Stitching_filter.

Just a comment: Image Statistcs uses the MultiNodeSelectionWidget which offers no AutoSelect feature (on purpose, because it could be a lot selections at once...).

Plugins from {24775} that do not follow the discussion result and need to be refactored (SetAutoSelectNewNodes(true)):
No auto selection

• Dicom Inspector
• Segmentation (although it is working if the segmentation plugin is opened after a node has been loadad - but not the other way around)
• Segmentation Utilities (QmitkDataSelectionWidget)
• MultiLabel Segmentation Utilities (QmitkDataSelectionWidget)
• Image Cropper (will be fixed in D375)
• Image Statistics
• Measurement (will be fixed in D372)
• MatchPoint
• Properties
• Point Set Interaction
• Semantic Relations
• Semantic Relations Statistics
• Volume Visualization

I found a similar error using Qt version 5.12.6 and the pluginGenerator.
The linker's path to Qt5WebEngine is wrongly parsed as "-lQt5::WebEngine" in "MyProject/Apps/MyApp/CMakeFiles/MyApp.dir/link.txt".

In T18436#208159, @thomass wrote:

Oh I didn’t look into the Differential yet, only tried it with the current develop. The crash I observed in with FastMarching3D

Oh I didn’t look into the Differential yet, only tried it with the current develop. The crash I observed in with FastMarching3D

Did you experience the error based on the Differential? Did you open FastMarching for 2D or 3D?

should work now, tests successful.
However warning is

Performance of not all algorithms is observed for all cases in task 'dummyTask'

despite being single task challenge. see also separate task

So I have a fix for the contour problem but what is missing is that the pointset is still drawn on timestep 0 instead of the current timestep and I have to figure out why.

I also experience a crash in the tool:

• compareRanks() allows to compare 2 ranking lists and compute Kendall's tau, would leave it in package
• benchmarkUtils allows to link with benchmark package (CRAN archived) which has some more features, but is not maintained anymore. might be dropped

File is FastMarchingTool.cpp

I can partly confirm it.

@thomass Can you confirm the problem in your todays check or is it fixed by the tasks mentioned above?

Fixed by/with T27621/T27622

Covered by the clarification for T27507

2D Segmentation tools:

can be closed?

the complication arises to handle the automatic sizing of the plot, which is why in the first chunk it reads out the width without plotting and in the second chunk the figure width is adapted

the function is network() and is already in the report

Thanks for the report. The complete packaging will be rewritten soon. Until then we strongly recommend to not use system Qt but to install Qt (version 5.12.9 is a good choice) with the official qt installer and to use Qt5_DIR to hint our CMake scripts to the lib/cmake/Qt5 directory. Don't forget to install the optional packages Qt Web Engine and Qt Script.

Discussion result: we go for #2 and refactor #1 out of the tools.

Pushed new branch T27651-BvecFiles.

Pushed new branch T27647-DicomModuleFix.

Pushed new branch bugfix/T25882-RewriteDashboardScript.

@thomass / @kalali : what i just realized. Did you also checked the automated 2D tools (like fast marching 2D)? Or only the 3D tools?