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m564f committed rKAAPANA035bbc88e509: openmined node renaminig and cleaning (authored by m564f).
openmined node renaminig and cleaning
Fri, Apr 16, 9:33 AM
m564f committed rKAAPANA4f37b352d39e: openmined-grid renaming (authored by m564f).
openmined-grid renaming
Fri, Apr 16, 9:33 AM
m564f committed rKAAPANAa15ee400e6d1: fixed image typo (authored by m564f).
fixed image typo
Fri, Apr 16, 9:33 AM
m564f committed rKAAPANA8c1488567858: duet renaming & cleaning (authored by m564f).
duet renaming & cleaning
Fri, Apr 16, 9:33 AM
m564f committed rKAAPANA97971d1900d5: removed old pysyft-nb (authored by m564f).
removed old pysyft-nb
Fri, Apr 16, 9:33 AM
m564f committed rKAAPANA1be18d1a377f: unified targetport naming for openmined (om) charts (authored by m564f).
unified targetport naming for openmined (om) charts
Fri, Apr 16, 9:33 AM
m564f committed rKAAPANA4bc13f088131: cleaning & renaming opemnmined pysyft-nb (authored by m564f).
cleaning & renaming opemnmined pysyft-nb
Fri, Apr 16, 9:33 AM

Yesterday

m564f committed rKAAPANAea60ee7e5c46: added openmined dag-installer (authored by m564f).
added openmined dag-installer
Thu, Apr 15, 6:11 PM
m564f committed rKAAPANA3a60c5f09eb8: added openmined processing container (authored by m564f).
added openmined processing container
Thu, Apr 15, 6:11 PM
m564f committed rKAAPANAf89d867b2d5d: added openminend dags and operators (authored by m564f).
added openminend dags and operators
Thu, Apr 15, 6:11 PM
schererj committed rKAAPANAd5fbe4f613a4: racoon-platform adjustments (authored by schererj).
racoon-platform adjustments
Thu, Apr 15, 6:06 PM
kleina committed rOBSHYPPOPYa340b927d14a: * Added alternative loss_function draft, that does not use a callback function. (authored by kleina).
* Added alternative loss_function draft, that does not use a callback function.
Thu, Apr 15, 5:22 PM
kleina claimed T28332: Support cascaded MPI processing.

I updated the draft in the branch directly (same file).

Thu, Apr 15, 5:02 PM · Hyppopy
kleina moved T28332: Support cascaded MPI processing from Backlog to In Progress on the Hyppopy board.
Thu, Apr 15, 4:59 PM · Hyppopy
thomass committed rRTTB377303e52d4f: include different sampling strategy based on absolute mm (authored by thomass).
include different sampling strategy based on absolute mm
Thu, Apr 15, 2:49 PM
kahl claimed T28437: 3D region growing may have issues when the seed point is on a pixel with value 0.
Thu, Apr 15, 10:45 AM · MITK (v2021.10)
kahl moved T28437: 3D region growing may have issues when the seed point is on a pixel with value 0 from Segmentation to Cycle on the MITK (v2021.10) board.
Thu, Apr 15, 10:44 AM · MITK (v2021.10)
schererj committed rKAAPANA42d7d1a38232: training adjustments (authored by schererj).
training adjustments
Thu, Apr 15, 8:37 AM
schererj committed rKAAPANA2ba957c69603: Merge branch 'feature/training-test' into develop (authored by schererj).
Merge branch 'feature/training-test' into develop
Thu, Apr 15, 8:37 AM
schererj committed rKAAPANA9306c2bcf0f3: small adjustments (authored by schererj).
small adjustments
Thu, Apr 15, 8:37 AM

Wed, Apr 14

cnlnz triaged T28449: Examples VideoPlayer as Normal priority.
Wed, Apr 14, 6:04 PM · Medical Detection Toolkit, MITK
kislinsk reassigned T28446: Migrate MatchPoint to ITK v5.1 from kislinsk to floca.

https://phabricator.mitk.org/source/matchpoint/history/T28446-MigrateToITKv5.1/

Wed, Apr 14, 2:31 PM · MatchPoint, MITK (v2021.10)
kislinsk committed rMPe001b8fbc029: Do more mutex fixes (authored by kislinsk).
Do more mutex fixes
Wed, Apr 14, 2:30 PM
kislinsk committed rMP7da4216a857d: MappingTaskBatch needs a more thorough migration (authored by kislinsk).
MappingTaskBatch needs a more thorough migration
Wed, Apr 14, 2:30 PM
kislinsk committed rMP110d8364c3b5: Fix more NULL smart pointer initializations (authored by kislinsk).
Fix more NULL smart pointer initializations
Wed, Apr 14, 2:30 PM
kislinsk committed rMP15b61e51f6ae: Do more enum replacements (authored by kislinsk).
Do more enum replacements
Wed, Apr 14, 2:30 PM
kislinsk committed rMP6ecafd4d4b7a: Adapt threading-related API to ITK v5 (authored by kislinsk).
Adapt threading-related API to ITK v5
Wed, Apr 14, 2:30 PM
kislinsk committed rMPad4619bd536d: [DOUBLE-CHECK THIS COMMIT] Migrate spatial objects (authored by kislinsk).
[DOUBLE-CHECK THIS COMMIT] Migrate spatial objects
Wed, Apr 14, 2:30 PM
kislinsk committed rMP255e513cf781: Replace unsigned long return type of GetMTime() with itk::ModifiedTimeType (authored by kislinsk).
Replace unsigned long return type of GetMTime() with itk::ModifiedTimeType
Wed, Apr 14, 2:30 PM
kislinsk committed rMP38d25ea84a08: Replace itksys::String with std::string (authored by kislinsk).
Replace itksys::String with std::string
Wed, Apr 14, 2:30 PM
kislinsk committed rMP0837e06d97ff: Replace vcl_ math functions with std:: math functions (authored by kislinsk).
Replace vcl_ math functions with std:: math functions
Wed, Apr 14, 2:30 PM
kislinsk committed rMP1a3628a9c04b: Replace ITK smart pointer NULL initialization with (implicit) nullptr… (authored by kislinsk).
Replace ITK smart pointer NULL initialization with (implicit) nullptr…
Wed, Apr 14, 2:30 PM
kislinsk committed rMPc733cb3de98f: Replace itk::ImageIOBase enums with itk::IO...Enum enums (authored by kislinsk).
Replace itk::ImageIOBase enums with itk::IO...Enum enums
Wed, Apr 14, 2:30 PM
kislinsk committed rMPeb6be9df7d3f: Replace itk::LoggerBase::PriorityLevelType with itk::LoggerBaseEnums… (authored by kislinsk).
Replace itk::LoggerBase::PriorityLevelType with itk::LoggerBaseEnums…
Wed, Apr 14, 2:30 PM
kislinsk committed rMP9168cd710920: Replace ITK mutexes with std mutexes (authored by kislinsk).
Replace ITK mutexes with std mutexes
Wed, Apr 14, 2:30 PM
kislinsk added a member for MatchPoint: kislinsk.
Wed, Apr 14, 2:30 PM
j562r added a member for CAMI: m646a.
Wed, Apr 14, 12:23 PM
a178n edited projects for T28354: Update MITK documentation on CMAKE build for plugins, added: MITK (v2021.10), Next Milestone; removed Missing Info, Restricted Project.
Wed, Apr 14, 11:45 AM · Next Milestone, MITK (v2021.10)
smith09 updated smith09.
Wed, Apr 14, 11:25 AM
matthesharp updated matthesharp.
Wed, Apr 14, 11:10 AM
thomass placed T27099: [MITKDoc] Revise Clipping Plane Plugin Documentation up for grabs.

Unassign myself because we removed the clipping plane from the release and have not discussed yet how to further proceed.

Wed, Apr 14, 11:01 AM · Next Milestone, MITK, Cleared
thomass reassigned T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior from thomass to kleina.
Wed, Apr 14, 11:00 AM · MITK
thomass updated subscribers of T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior.

The first user feedback of the patch above was positive, the users liked the behavior.
However, the patch did not work correctly in terms of modifying the points afterwards (users were warned before).

Wed, Apr 14, 10:48 AM · MITK
floca moved T27437: Migrate MITK to use ITK 5.x from Backlog to Cycle on the MITK (v2021.10) board.
Wed, Apr 14, 10:39 AM · MITK (v2021.10)
floca moved T28446: Migrate MatchPoint to ITK v5.1 from Backlog to Cycle on the MITK (v2021.10) board.
Wed, Apr 14, 10:39 AM · MatchPoint, MITK (v2021.10)
thomass placed T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation up for grabs.
Wed, Apr 14, 10:38 AM · MITK (v2021.10), Missing Info, Restricted Project
floca claimed T28248: [Segmentation] Picking 3D Tool creates a 3D segmentation out of a 4D image.
Wed, Apr 14, 10:30 AM · MITK (v2021.10)
nolden added a comment to T27437: Migrate MITK to use ITK 5.x .

@kislinsk thanks for taking over. The WIP stuff I put on github still could be useful, see comment above. let me know if I can help.

Wed, Apr 14, 9:57 AM · MITK (v2021.10)
kislinsk triaged T28446: Migrate MatchPoint to ITK v5.1 as High priority.
Wed, Apr 14, 9:56 AM · MatchPoint, MITK (v2021.10)
kislinsk claimed T27437: Migrate MITK to use ITK 5.x .
Wed, Apr 14, 9:19 AM · MITK (v2021.10)

Tue, Apr 13

schererj committed rKAAPANAf04ce5093188: Merge branch 'feature/racoon-test' into develop (authored by schererj).
Merge branch 'feature/racoon-test' into develop
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANA8dd9206d1a70: schedule on big enough gpus only (authored by schererj).
schedule on big enough gpus only
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANAee303b55fbc7: gpu scheduling working (authored by schererj).
gpu scheduling working
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANA4a6d0c79e293: Task01 fix (authored by schererj).
Task01 fix
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANAca5fc1cf996f: formatting (authored by schererj).
formatting
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANA0b373340162e: ready for testing (authored by schererj).
ready for testing
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANAf82e98f45980: removed max_active_runs from nnunet-inference (authored by schererj).
removed max_active_runs from nnunet-inference
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANAfe54e2818c03: gpu scheduling (authored by schererj).
gpu scheduling
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANAede8ff068dbf: added gpu-specific scheduling (authored by schererj).
added gpu-specific scheduling
Tue, Apr 13, 10:53 PM
schererj committed rKAAPANAc1d507b9373b: model metadata-adjustments (authored by schererj).
model metadata-adjustments
Tue, Apr 13, 10:53 PM
m564f committed rKAAPANA89e5f055c1f5: very very evil bug when setting minio_host for remote minio-action-operators (authored by m564f).
very very evil bug when setting minio_host for remote minio-action-operators
Tue, Apr 13, 4:55 PM
m564f committed rKAAPANA1eff600b539b: removed old scheduler scripts (authored by m564f).
removed old scheduler scripts
Tue, Apr 13, 1:21 PM
m564f committed rKAAPANAddee0362049e: implemented smarter solution to wait for models & reload them | using Minio Api (authored by m564f).
implemented smarter solution to wait for models & reload them | using Minio Api
Tue, Apr 13, 1:20 PM
m564f committed rKAAPANA793a4a41dfb8: more generic training scheduler | avg & seg together (authored by m564f).
more generic training scheduler | avg & seg together
Tue, Apr 13, 1:14 PM
m564f committed rKAAPANAf4e2dcef9c8c: removed remote-dag-triggering | smarter solution using Minio API in scheduler… (authored by m564f).
removed remote-dag-triggering | smarter solution using Minio API in scheduler…
Tue, Apr 13, 1:14 PM
m564f committed rKAAPANA11a7ab3a91c7: remote training step updated (authored by m564f).
remote training step updated
Tue, Apr 13, 1:14 PM

Mon, Apr 12

floca moved T28439: [Segmentation] Support custom background/outside values in image masking from Segmentation to Cycle on the MITK (v2021.10) board.
Mon, Apr 12, 9:21 PM · MITK (v2021.10)
floca moved T28422: Multilabel color map does not produce unique colors from Segmentation to Cycle on the MITK (v2021.10) board.
Mon, Apr 12, 9:20 PM · MITK (v2021.10)
floca moved T28421: Use whole image grey value must always be executed when switching colormap to 'Multilabel' from Segmentation to Cycle on the MITK (v2021.10) board.
Mon, Apr 12, 9:20 PM · MITK (v2021.10)
floca moved T27637: [Segmentation] Multilabel label name dialoge on label creation is a UX problem from Backlog to MITK Meeting on the Request for Discussion board.
Mon, Apr 12, 9:19 PM · MITK (v2021.10), Request for Discussion
floca moved T27637: [Segmentation] Multilabel label name dialoge on label creation is a UX problem from Backlog to Segmentation on the MITK (v2021.10) board.
Mon, Apr 12, 9:19 PM · MITK (v2021.10), Request for Discussion
floca edited projects for T27637: [Segmentation] Multilabel label name dialoge on label creation is a UX problem, added: MITK (v2021.10); removed MITK.
Mon, Apr 12, 9:19 PM · MITK (v2021.10), Request for Discussion
floca moved T28144: CorrectorTool does not properly handle unlocked lables of LabelSet Images from Backlog to Segmentation on the MITK (v2021.10) board.
Mon, Apr 12, 9:18 PM · Request for Discussion, MITK (v2021.10)
floca moved T28144: CorrectorTool does not properly handle unlocked lables of LabelSet Images from Backlog to MITK Meeting on the Request for Discussion board.
Mon, Apr 12, 9:18 PM · Request for Discussion, MITK (v2021.10)
floca added a comment to T28144: CorrectorTool does not properly handle unlocked lables of LabelSet Images.

We should discuss if we should not deprecate the old CorrectorTool completly because of several issues and because it adds only very small value to using add/substract with hotkeys directly.

Mon, Apr 12, 9:18 PM · Request for Discussion, MITK (v2021.10)
floca edited projects for T28144: CorrectorTool does not properly handle unlocked lables of LabelSet Images, added: MITK (v2021.10), Request for Discussion; removed MITK.
Mon, Apr 12, 9:16 PM · Request for Discussion, MITK (v2021.10)
floca moved T28145: SetRegionTool does not work as expected (flood fill like) with concentric structures. from Backlog to Segmentation on the MITK (v2021.10) board.
Mon, Apr 12, 9:15 PM · MITK (v2021.10)
floca edited projects for T28145: SetRegionTool does not work as expected (flood fill like) with concentric structures., added: MITK (v2021.10); removed MITK.
Mon, Apr 12, 9:15 PM · MITK (v2021.10)
floca added a project to T28146: Rework how SegTool2D should add contour markers: Next Milestone.
Mon, Apr 12, 9:14 PM · Next Milestone, MITK
floca added a project to T28259: Refactor the usage of QmitkSliceNavigationListener: Next Milestone.
Mon, Apr 12, 9:13 PM · Next Milestone, MITK
m564f committed rKAAPANAeccc4416f514: fed mnist exp dags & operators added (authored by m564f).
fed mnist exp dags & operators added
Mon, Apr 12, 7:45 PM
m564f committed rKAAPANA2000fe98a5cc: removed location flag in operator name (authored by m564f).
removed location flag in operator name
Mon, Apr 12, 7:45 PM
m564f committed rKAAPANAe71556b33937: pretty print of rest-call (authored by m564f).
pretty print of rest-call
Mon, Apr 12, 7:45 PM
k656s committed rKAAPANAaf12b9b3e047: updated starter platform (authored by k656s).
updated starter platform
Mon, Apr 12, 5:47 PM
k656s committed rKAAPANA2276eaeadf12: adapted starte-platform installer script (authored by k656s).
adapted starte-platform installer script
Mon, Apr 12, 5:29 PM
k656s committed rKAAPANA131f2948ed5d: add flag for prefetch-extensions (authored by k656s).
add flag for prefetch-extensions
Mon, Apr 12, 5:21 PM
schererj committed rKAAPANA5197c4ac6364: gpu_count == 0 fix (authored by schererj).
gpu_count == 0 fix
Mon, Apr 12, 4:57 PM
k656s committed rKAAPANA1d1b0df27a5d: changed build order (authored by k656s).
changed build order
Mon, Apr 12, 4:53 PM
schererj committed rKAAPANA1f03e20fdb60: indentation correction (authored by schererj).
indentation correction
Mon, Apr 12, 4:49 PM
schererj committed rKAAPANAfb91dd787196: Merge branch 'feature/documentation-update' into develop (authored by schererj).
Merge branch 'feature/documentation-update' into develop
Mon, Apr 12, 4:49 PM
k688h committed rKAAPANAeb2addf9da06: Add missing config key in build-configuration file (authored by k688h).
Add missing config key in build-configuration file
Mon, Apr 12, 3:43 PM
k656s committed rKAAPANA4ec2a23ccb74: reorganisation of kaapana extensions, bugfix in installer script (authored by k656s).
reorganisation of kaapana extensions, bugfix in installer script
Mon, Apr 12, 12:43 PM
floca committed rRTTB66d35bc657a1: Fixed linking errors for MutableDoseAccessorInterface (authored by floca).
Fixed linking errors for MutableDoseAccessorInterface
Mon, Apr 12, 12:32 PM
floca committed rRTTBa6f309e075e5: Fixed dependencies of tests to TestHelper (authored by floca).
Fixed dependencies of tests to TestHelper
Mon, Apr 12, 12:15 PM
kislinsk raised the priority of T27437: Migrate MITK to use ITK 5.x from Normal to High.
Mon, Apr 12, 10:55 AM · MITK (v2021.10)
kislinsk edited projects for T27437: Migrate MITK to use ITK 5.x , added: MITK (v2021.10); removed MITK.
Mon, Apr 12, 10:54 AM · MITK (v2021.10)

Sun, Apr 11

thomass committed rRTTB051dec8f7167: try to make the test build work again wip (authored by thomass).
try to make the test build work again wip
Sun, Apr 11, 5:49 PM
thomass committed rRTTBac212ba954f6: uncommented test snippet for now because not complete (authored by thomass).
uncommented test snippet for now because not complete
Sun, Apr 11, 5:49 PM
thomass committed rRTTBaf580ef73263: Merge branch 'master' into feature/T27843-Add_gamma_index_to_RTTB (authored by thomass).
Merge branch 'master' into feature/T27843-Add_gamma_index_to_RTTB
Sun, Apr 11, 5:49 PM
thomass committed rRTTBfe1e1968a7fc: fix for doseThreshold based on measuredDose instead of referenceDose (authored by thomass).
fix for doseThreshold based on measuredDose instead of referenceDose
Sun, Apr 11, 5:49 PM