Diffusion MITK 27ac821798c9

Merge branch 'bug-18112-DWI-Registration-PreReleaseFixes'
27ac821798c9
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Merge branch 'bug-18112-DWI-Registration-PreReleaseFixes'

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• goch

Authored on Oct 8 2014, 3:53 PM

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rMITK9229b96b6d84: Comment out unused variable
rMITKf43088f1411d: Merge branch 'bug-18106…

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• goch committed rMITK27ac821798c9: Merge branch 'bug-18112-DWI-Registration-PreReleaseFixes' (authored by • goch).Oct 8 2014, 3:53 PM

Merged Changes

9229b96b6d84 Comment out unused variable
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• goch
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b1a166ed3246 Merge remote-tracking branch 'origin/personal/hering/sw-review-branch' into bug…
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• hering
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88f7c9415da4 Merge branch 'bug-15846-DwiHeadMotionCorrection-master-integration' into bug…
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20b969ea4fee Fixed variable initialization
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4660ca477bbc Enabling Head-motion correction batch processing
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cc096c43541e User Manual enhancements
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21bb967882da Entry for user manual
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c9e44892f65b Registration code cleanup
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0bef0824a2e0 Cleanup code and add documentation
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6f6a45fe0ad6 Fix compile errors due to master changes
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a61ec75715cb Merge remote-tracking branch 'origin/bug-15846-DwiHeadMotionCorrection-master…
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efc0e9a636a5 Fixed SplitDWFilter : correctly copying directions
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672c6064ce93 Exported ItkAccumulate out of class
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4dddf40b0df0 Fixed warnings, added missing dependencies
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44e9ae6a6570 Merge branch 'bug-15846-FixesInDWIHeadMotionCorrection' into bug-15846…
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1bc3595cea8b Fixed mask image iterator construction
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be7eaf17ced8 Fixing mask image iteration, removed std output
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d4293da33e3c Add masking for signal generation
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3207deb4115f Correct processing of multi-b0 data
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b1b7b6665434 Merge branch 'personal/hering/mbi-dev-branch' into bug-15846…
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a04fe04c6f50 Enhancing API to allow inheritance
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569ebf5bc248 Fix b0 initialization in tensor to dwi
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80a742be66fe Fix pyramid level initialization
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d43a39fed327 Resolved conflicts
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04206f02ecc4 Add single shell extraction custom test
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e8fe40b0836d Merge branch 'personal/hering/mbi-dev-branch' of mitk.org:MITK into…
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0a32d1ac5d52 Single shell extraction
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59fb79f550b3 WIP
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7ff2ac68f700 Add custom test for DW convert
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00c39be56252 Move GradientReduction filter to DiffusionCore
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36683e0a13d9 Allowing more complex processing in registration
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043b08df2f50 Changed container type to the same as in DiffusionImage
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4cdaf4c5933f Adapting to changed Container type
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afbef68c3459 Changed container type to the same as in DiffusionImage
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403342d8d75c Merge branch 'personal/hering/mbi-dev-branch' of mitk.org:MITK into…
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f434d83a482e Adapting to changed Container type
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fccdd86195a9 Changed container type to the same as in DiffusionImage
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092d847e1c7c Merge branch 'master' into personal/hering/mbi-dev-branch
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8549614b9d06 Merge branch 'bug-15945-FixContainerType' into mbi-dev-branch
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348223005b67 Adapting to changed Container type
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7f22862cf105 Changed container type to the same as in DiffusionImage
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Changes (32)

Path

Size

Applications/

Diffusion/

MitkDiffusion.cpp

Modules/

DiffusionImaging/

DiffusionCore/

Algorithms/

Registration/

mitkDWIHeadMotionCorrectionFilter.cpp

mitkDWIHeadMotionCorrectionFilter.h

mitkPyramidImageRegistrationMethod.cpp

mitkPyramidImageRegistrationMethod.h

mitkPyramidRegistrationMethodHelper.h

itkSplitDWImageFilter.h

itkSplitDWImageFilter.txx

itkTensorImageToDiffusionImageFilter.h

itkTensorImageToDiffusionImageFilter.txx

CMakeLists.txt

IODataStructures/

DiffusionWeightedImages/

mitkDiffusionImage.txx

Testing/

files.cmake

	mitkConvertDWITypeTest.cpp
	mitkDWHeadMotionCorrectionTest.cpp

mitkDWHeadMotionCorrectionTest.cpp

mitkExtractSingleShellTest.cpp

files.cmake

	DiffusionCore/	Algorithms/
	FiberTracking/	Algorithms/

itkElectrostaticRepulsionDiffusionGradientReductionFilter.h

itkElectrostaticRepulsionDiffusionGradientReductionFilter.txx

FiberTracking/

Algorithms/

itkElectrostaticRepulsionDiffusionGradientReductionFilter.h

itkElectrostaticRepulsionDiffusionGradientReductionFilter.txx

files.cmake

Plugins/

org.mitk.gui.qt.diffusionimaging/

documentation/

UserManual/

QmitkDiffusionImagingUserManual.dox

QmitkFiberfoxViewUserManual.dox

QmitkOdfMaximaExtractionViewUserManual.dox

registration_basic.png

registration_batch.png

src/

internal/

QmitkDiffusionRegistrationView.cpp

QmitkDiffusionRegistrationView.h

QmitkDiffusionRegistrationViewControls.ui

QmitkTensorReconstructionView.cpp

QmitkTensorReconstructionView.h

rMITK27ac821798c9

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Applications/Diffusion/MitkDiffusion.cpp

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Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkDWIHeadMotionCorrectionFilter.cpp

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Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkDWIHeadMotionCorrectionFilter.h

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Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkPyramidImageRegistrationMethod.cpp

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Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkPyramidImageRegistrationMethod.h

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Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkPyramidRegistrationMethodHelper.h

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Modules/DiffusionImaging/DiffusionCore/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.h

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Modules/DiffusionImaging/DiffusionCore/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.txx

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Modules/DiffusionImaging/DiffusionCore/Algorithms/itkSplitDWImageFilter.h

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Modules/DiffusionImaging/DiffusionCore/Algorithms/itkSplitDWImageFilter.txx

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Modules/DiffusionImaging/DiffusionCore/Algorithms/itkTensorImageToDiffusionImageFilter.h

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Modules/DiffusionImaging/DiffusionCore/Algorithms/itkTensorImageToDiffusionImageFilter.txx

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Modules/DiffusionImaging/DiffusionCore/CMakeLists.txt

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Modules/DiffusionImaging/DiffusionCore/IODataStructures/DiffusionWeightedImages/mitkDiffusionImage.txx

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Modules/DiffusionImaging/DiffusionCore/Testing/files.cmake

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Modules/DiffusionImaging/DiffusionCore/Testing/mitkConvertDWITypeTest.cpp

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Modules/DiffusionImaging/DiffusionCore/Testing/mitkDWHeadMotionCorrectionTest.cpp

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Modules/DiffusionImaging/DiffusionCore/Testing/mitkExtractSingleShellTest.cpp

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Modules/DiffusionImaging/DiffusionCore/files.cmake

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.h

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.txx

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Modules/DiffusionImaging/FiberTracking/files.cmake

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Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkDiffusionImagingUserManual.dox

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Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkFiberfoxViewUserManual.dox

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Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkOdfMaximaExtractionViewUserManual.dox

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Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/registration_basic.png

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Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/registration_batch.png

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkDiffusionRegistrationView.cpp

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkDiffusionRegistrationView.h

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkDiffusionRegistrationViewControls.ui

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkTensorReconstructionView.cpp

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkTensorReconstructionView.h

Merge branch 'bug-18112-DWI-Registration-PreReleaseFixes'27ac821798c9Actions

Description

Details

Event Timeline

Merged Changes

Changes (32)

rMITK27ac821798c9

Applications/Diffusion/MitkDiffusion.cpp

Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkDWIHeadMotionCorrectionFilter.cpp

Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkDWIHeadMotionCorrectionFilter.h

Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkPyramidImageRegistrationMethod.cpp

Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkPyramidImageRegistrationMethod.h

Modules/DiffusionImaging/DiffusionCore/Algorithms/Registration/mitkPyramidRegistrationMethodHelper.h

Modules/DiffusionImaging/DiffusionCore/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.h

Modules/DiffusionImaging/DiffusionCore/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.txx

Modules/DiffusionImaging/DiffusionCore/Algorithms/itkSplitDWImageFilter.h

Modules/DiffusionImaging/DiffusionCore/Algorithms/itkSplitDWImageFilter.txx

Modules/DiffusionImaging/DiffusionCore/Algorithms/itkTensorImageToDiffusionImageFilter.h

Modules/DiffusionImaging/DiffusionCore/Algorithms/itkTensorImageToDiffusionImageFilter.txx

Modules/DiffusionImaging/DiffusionCore/CMakeLists.txt

Modules/DiffusionImaging/DiffusionCore/IODataStructures/DiffusionWeightedImages/mitkDiffusionImage.txx

Modules/DiffusionImaging/DiffusionCore/Testing/files.cmake

Modules/DiffusionImaging/DiffusionCore/Testing/mitkConvertDWITypeTest.cpp

Modules/DiffusionImaging/DiffusionCore/Testing/mitkDWHeadMotionCorrectionTest.cpp

Modules/DiffusionImaging/DiffusionCore/Testing/mitkExtractSingleShellTest.cpp

Modules/DiffusionImaging/DiffusionCore/files.cmake

Modules/DiffusionImaging/FiberTracking/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.h

Modules/DiffusionImaging/FiberTracking/Algorithms/itkElectrostaticRepulsionDiffusionGradientReductionFilter.txx

Modules/DiffusionImaging/FiberTracking/files.cmake

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkDiffusionImagingUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkFiberfoxViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkOdfMaximaExtractionViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/registration_basic.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/registration_batch.png

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkDiffusionRegistrationView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkDiffusionRegistrationView.h

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkDiffusionRegistrationViewControls.ui

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkTensorReconstructionView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkTensorReconstructionView.h

Merge branch 'bug-18112-DWI-Registration-PreReleaseFixes'
27ac821798c9
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