Diffusion MITK 35251b2b52af

Merge branch 'bug-18877-FiberfoxKspaceNoise'
35251b2b52af
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Merge branch 'bug-18877-FiberfoxKspaceNoise'

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Authored on Jun 12 2015, 2:57 PM

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rMITK758d364fa8e1: simplified k-space image filter. possible for odd image sizes now
rMITK14f6129cc811: Merge branch 'bug-18851-FiberfoxT1_2'

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neher committed rMITK35251b2b52af: Merge branch 'bug-18877-FiberfoxKspaceNoise' (authored by neher).Jun 12 2015, 2:57 PM

Merged Changes

758d364fa8e1 simplified k-space image filter. possible for odd image sizes now
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c33e60a1d5a8 removed chi-squared noise distribution
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835e1e641ba7 documentation
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a7a65206e979 preparing everything for tests
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d08952f02a27 partial fourier working correctly
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1743e8f58a2f saving motion log in miniapps
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06173aedc4d3 added additional images again
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d9544529a405 enable multicoil acquisitions
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56156772bc3f saving additional images with miniapp
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59dc6b1494d5 eddy currents are working. volume fraction image handling extended.
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53dcf34aa76a updated eddy currents
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02749f066571 old parameter files are loadable
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2a04f4a6356f added parameters to save and load
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4e064456cca0 partial fourier working. todo: parameters, noise
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Changes (21)

Path

Size

Modules/

DiffusionImaging/

DiffusionCore/

Algorithms/

itkFiniteDiffOdfMaximaExtractionFilter.cpp

itkFiniteDiffOdfMaximaExtractionFilter.h

DiffusionIO/

mitkPlanarFigureCompositeReader.cpp

mitkPlanarFigureCompositeWriter.cpp

FiberTracking/

Algorithms/

itkAddArtifactsToDwiImageFilter.cpp

itkDftImageFilter.cpp

itkDftImageFilter.h

itkKspaceImageFilter.cpp

itkKspaceImageFilter.h

itkTractsToDWIImageFilter.cpp

itkTractsToDWIImageFilter.h

IODataStructures/

mitkFiberfoxParameters.cpp

mitkFiberfoxParameters.h

SignalModels/

mitkDiffusionSignalModel.h

Testing/

mitkFiberfoxSignalGenerationTest.cpp

MiniApps/

PeakExtraction.cpp

Plugins/

org.mitk.gui.qt.diffusionimaging/

src/

internal/

QmitkFiberfoxView.cpp

QmitkFiberfoxView.h

QmitkFiberfoxViewControls.ui

rMITK35251b2b52af

Modules/DiffusionImaging/DiffusionCore/Algorithms/itkFiniteDiffOdfMaximaExtractionFilter.cpp

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Modules/DiffusionImaging/DiffusionCore/Algorithms/itkFiniteDiffOdfMaximaExtractionFilter.h

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Modules/DiffusionImaging/DiffusionIO/mitkPlanarFigureCompositeReader.cpp

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Modules/DiffusionImaging/DiffusionIO/mitkPlanarFigureCompositeWriter.cpp

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkAddArtifactsToDwiImageFilter.cpp

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkDftImageFilter.cpp

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkDftImageFilter.h

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkKspaceImageFilter.cpp

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkKspaceImageFilter.h

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkTractsToDWIImageFilter.cpp

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Modules/DiffusionImaging/FiberTracking/Algorithms/itkTractsToDWIImageFilter.h

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Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.cpp

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Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.h

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Modules/DiffusionImaging/FiberTracking/SignalModels/mitkDiffusionSignalModel.h

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Modules/DiffusionImaging/FiberTracking/Testing/CMakeLists.txt

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Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberfoxSignalGenerationTest.cpp

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Modules/DiffusionImaging/MiniApps/Fiberfox.cpp

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Modules/DiffusionImaging/MiniApps/PeakExtraction.cpp

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberfoxView.cpp

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberfoxView.h

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberfoxViewControls.ui

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