Diffusion MITK 818529c126b1

Merge branch 'bug-12135-RefactorGibbs3'
818529c126b1
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Description

Merge branch 'bug-12135-RefactorGibbs3'

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neher

Authored on Jun 18 2012, 9:50 AM

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rMITKc9e9093f3abc: finished refactoring
rMITK71573d2ed470: Merge branch 'bug-12091-FiberPruning'

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neher committed rMITK818529c126b1: Merge branch 'bug-12135-RefactorGibbs3' (authored by neher).Jun 18 2012, 9:50 AM

Merged Changes

c9e9093f3abc finished refactoring
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bffc312061e4 tracking process can be seeded now -> testing possible
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8bf3744a2990 finished refactoring of sampler. todo: sphere interpolator
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423b9eae144d refactored and documented energy computer
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8912ca065ceb processing of tensor images possible
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2035dee88067 refactored fiber builder
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70ba6d7c946f wip
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fd6ef58bd0f9 wip
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a02b0b15f578 removed particle cap (always 1)
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b01c3650ef45 Tract refactored
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dcc7bcc2cf72 particle grid refactored
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8cc6870ee268 wip
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ebb69098936a added everything to mitk
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7991dc6f2594 particle grid is mitk now
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Changes (30)

Path

Size

Modules/

DiffusionImaging/

	CMakeLists.txt
	CMakeLists.txt~

CMakeLists.txt~

Rendering/

mitkFiberBundleXMapper3D.cpp

Tractography/

GibbsTracking/

BuildFibres.cpp

EnergyComputerBase.cpp

EnergyComputer_connec.cpp

SphereInterpolator.cpp

auxilary_classes.cpp

mitkEnergyComputer.cpp

mitkEnergyComputer.h

mitkFiberBuilder.cpp

mitkFiberBuilder.h

mitkMetropolisHastingsSampler.cpp

mitkMetropolisHastingsSampler.h

mitkSphereInterpolator.h

pcRJMCMC.cpp

itkGibbsTrackingFilter.cpp

itkGibbsTrackingFilter.h

files.cmake

Plugins/

org.mitk.gui.qt.diffusionimaging/

src/

internal/

QmitkGibbsTrackingView.cpp

QmitkGibbsTrackingView.h

QmitkGibbsTrackingViewControls.ui

rMITK818529c126b1

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Modules/DiffusionImaging/CMakeLists.txt

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Modules/DiffusionImaging/CMakeLists.txt~

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Modules/DiffusionImaging/Rendering/mitkFiberBundleXMapper3D.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/BuildFibres.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/EnergyComputerBase.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/EnergyComputer_connec.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/MersenneTwister.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/ParticleGrid.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/RJMCMCBase.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/RJMCMC_randshift.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/SphereInterpolator.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/auxilary_classes.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkEnergyComputer.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkEnergyComputer.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkFiberBuilder.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkFiberBuilder.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkMetropolisHastingsSampler.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkMetropolisHastingsSampler.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticle.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticleGrid.cpp

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticleGrid.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkSimpSamp.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/mitkSphereInterpolator.h

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Modules/DiffusionImaging/Tractography/GibbsTracking/pcRJMCMC.cpp

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Modules/DiffusionImaging/Tractography/itkGibbsTrackingFilter.cpp

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Modules/DiffusionImaging/Tractography/itkGibbsTrackingFilter.h

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Modules/DiffusionImaging/files.cmake

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingView.cpp

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingView.h

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Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingViewControls.ui

Merge branch 'bug-12135-RefactorGibbs3'818529c126b1Actions

Description

Details

Event Timeline

Merged Changes

Changes (30)

rMITK818529c126b1

Modules/DiffusionImaging/CMakeLists.txt

Modules/DiffusionImaging/CMakeLists.txt~

Modules/DiffusionImaging/Rendering/mitkFiberBundleXMapper3D.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/BuildFibres.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/EnergyComputerBase.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/EnergyComputer_connec.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/MersenneTwister.h

Modules/DiffusionImaging/Tractography/GibbsTracking/ParticleGrid.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/RJMCMCBase.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/RJMCMC_randshift.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/SphereInterpolator.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/auxilary_classes.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkEnergyComputer.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkEnergyComputer.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkFiberBuilder.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkFiberBuilder.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkMetropolisHastingsSampler.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkMetropolisHastingsSampler.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticle.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticleGrid.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticleGrid.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkSimpSamp.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkSphereInterpolator.h

Modules/DiffusionImaging/Tractography/GibbsTracking/pcRJMCMC.cpp

Modules/DiffusionImaging/Tractography/itkGibbsTrackingFilter.cpp

Modules/DiffusionImaging/Tractography/itkGibbsTrackingFilter.h

Modules/DiffusionImaging/files.cmake

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingView.h

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingViewControls.ui

Merge branch 'bug-12135-RefactorGibbs3'
818529c126b1
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