Upgrade DCMQI to 1.3.0
There are two very important improvements in this updated version:
- Performance of conversion is improved perhaps by at least an order of magnitude, cutting down the conversion for large DICOM SEG (such as TotalSegmentator results) from minutes to seconds.
- It is now possible to save non-overlapping segments into a single file instead of previous convention of saving each segment as a separate file. See details in https://github.com/QIICR/dcmqi/pull/464. Note that to use this feature you will need to use the --merge flag (there may be changes needed to the MITK dcmqi wrapper - I am sure you will test this - but there are no changes to the JSON schema)