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floca (Ralf Omar Floca)
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Projects (14)

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User Since
Aug 1 2016, 12:10 PM (216 w, 6 d)

Recent Activity

Yesterday

kalali awarded T24771: [MITKDoc] Add a concept documentation for the data storage inspectors and the overhaul of the selection concept a Party Time token.
Sun, Sep 27, 10:01 PM · MITK (2020)
floca edited projects for T27510: [MITKDoc] Add/revise developers documentation for new statistics back-/frontend, added: MITK, Next Milestone; removed MITK (2020).
Sun, Sep 27, 12:49 PM · Next Milestone, MITK

Fri, Sep 25

floca removed a project from T27569: US DICOM images are displayed turquoise and LUT cannot be changed: Request for Discussion.

Discussion result: if GDCM does not fix it fast enough, we should take option 3 (as we very likely need a dedicated DICOM US mime type anyways).

Fri, Sep 25, 10:00 PM · Restricted Project, MITK
floca added a revision to T27791: Optimize RT Mime Types: Unknown Object (Differential Revision).
Fri, Sep 25, 2:43 PM · MITK
floca triaged T27791: Optimize RT Mime Types as Normal priority.
Fri, Sep 25, 2:34 PM · MITK
floca moved T27184: Clipping plane deformation tool doesn't show updates in 3d window from Backlog to MITK Meeting on the Request for Discussion board.
Fri, Sep 25, 11:24 AM · Missing Info, Restricted Project, MITK (2020)

Thu, Sep 24

floca committed rMITK3d7a1b765f58: T27111 - Revise documentation of MatchPoint Visualizer (authored by floca).
T27111 - Revise documentation of MatchPoint Visualizer
Thu, Sep 24, 9:06 AM
floca committed rMITKd887bc53b9bb: Fixed review remarks (authored by floca).
Fixed review remarks
Thu, Sep 24, 9:06 AM
floca committed rMITKfaf315c77212: Revise documentation of MatchPoint Visualizer (authored by floca).
Revise documentation of MatchPoint Visualizer
Thu, Sep 24, 9:06 AM
floca closed T27111: [MITKDoc] Revise Matchpoint Registration Visualizer Plugin Documentation as Resolved by committing rMITKfaf315c77212: Revise documentation of MatchPoint Visualizer.
Thu, Sep 24, 9:06 AM · Cleared, MITK (2020)

Mon, Sep 14

floca added a comment to T27669: Dicom import issue with MITK binaries (package) and Ubuntu.

Did you your "release ldd" Workbench started and worked properly at all? Seems like most of the SOs could not be loaded correctly. Not even MitkCore. I would assume that workbench does not even start?!?

Mon, Sep 14, 3:24 PM · Missing Info, DICOM, MITK

Fri, Sep 11

floca updated subscribers of T27718: Miniapp for basic DICOM testing.

@schererj Is this needed for the kaapana release?

Fri, Sep 11, 9:22 PM · Kaapana (internal), MITK
floca added a comment to T27718: Miniapp for basic DICOM testing.

check content, e.g. if != 0 voxels exist etc

Fri, Sep 11, 9:13 PM · Kaapana (internal), MITK
floca added a comment to T27569: US DICOM images are displayed turquoise and LUT cannot be changed.

Just checked GDCM 3.0.7 if by chance the issue was fixed there, unfortunately not.

Fri, Sep 11, 3:15 PM · Restricted Project, MITK
floca added a comment to T27506: Extend checklists for segmentation view.

Damn I have forgotten to copy the checklist to a reachable share. @kalali Is it already done now or obsolete?

Fri, Sep 11, 10:33 AM · Restricted Project, Cleared, MITK (2020)

Thu, Sep 10

floca edited projects for T27339: Provide public MITK ModelFit installer on a regular basis, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:35 PM · MITK, Next Milestone
floca edited projects for T26288: MRI Perfusion view should only generate concentration images once, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:35 PM · MITK, Next Milestone, Cleared
floca edited projects for T27350: Refactoring of T1 map calculation/selection for perfusion and CEST, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:35 PM · MITK, Next Milestone, Cleared
floca edited projects for T27654: Refactor concentration curve converter view to use new selection concept, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:34 PM · MITK, Next Milestone, Cleared
floca edited projects for T27664: Check conversion from signal to concentration for a turboFLASH sequence, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:34 PM · MITK, Next Milestone, Cleared
floca edited projects for T27666: Concentration curve converter view- missing echo time unit, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:34 PM · MITK, Next Milestone, Cleared
floca edited projects for T27667: Concentration curve converter view- errors in formula for T2-weighted signal conversion, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:34 PM · MITK, Next Milestone, Cleared
floca edited projects for T27671: Concentration Curve Converter: Crash due to baseline avergaing, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:34 PM · MITK, Next Milestone, Cleared
floca edited projects for T27432: Error loading DCE-MRI DICOM image, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:33 PM · MITK, Next Milestone, DICOM, Cleared
floca edited projects for T27451: [Registration] Mapper: Changed default level/window after identity mapping , added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:33 PM · MITK, Next Milestone, Cleared
floca edited projects for T27495: [Registration] Evaluator/Manipulator wipe mode is lacking one click behind, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:32 PM · MITK, Next Milestone, Cleared
floca edited projects for T25192: Enable DICOM SEG conversion for nrrd segmentations, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:28 PM · MITK, Next Milestone, MICO (Demo MICCAI 2018)
floca edited projects for T26950: Add rule class for DICOM Seg relations to source image, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:28 PM · MITK, Next Milestone, Cleared
floca edited projects for T26951: DICOM SEG - DicomSegIO should just use properties of the passed segmentation object, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:28 PM · MITK, Next Milestone
floca edited projects for T26952: Implement helper to correct (DICOM conformal) set the properties of a segmentation (DICOM SEG), added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:27 PM · MITK, Next Milestone
floca edited projects for T26953: DICOM SEG - Cannot rewrite segmentations as DICOM SEG, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:27 PM · MITK, Next Milestone, Cleared
floca edited projects for T27357: Check/Update DICOMTags of interest, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:27 PM · MITK, Next Milestone, Cleared, HiGHmed
floca edited projects for T27263: Measurements and pointsets display no valuable information, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:27 PM · MITK, Next Milestone
floca edited projects for T27269: PlanarCircle shrinks in size when moved towards image boundaries, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:26 PM · MITK, Next Milestone
floca edited projects for T27270: Planar figures are inconsistently bound by reference image, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:26 PM · MITK, Next Milestone
floca edited projects for T27258: [statistics] Deprecate QmitkImageStatisticsGeneratorJob, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:26 PM · MITK, Next Milestone
floca edited projects for T27031: [Image statistics] Define identifier for statistics and histogram, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:26 PM · MITK, Next Milestone
floca edited projects for T26098: [ImageStatistics] Histogram Statistics need to be tested, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:26 PM · MITK, Next Milestone, Restricted Project
floca edited projects for T27271: [Image Statistics] Double clicking to isolate one graph only works on already enabled graphs, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:25 PM · MITK, Next Milestone
floca edited projects for T27285: QmitkChart widget should support ID or allow control over labels, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:25 PM · MITK, Next Milestone
floca removed a project from T27306: [statistics] Errors caused in MitkChart when using histogram and intensity profile widgets.: MITK (2020).
Thu, Sep 10, 4:25 PM · MITK, Next Milestone
floca added a project to T27306: [statistics] Errors caused in MitkChart when using histogram and intensity profile widgets.: Next Milestone.
Thu, Sep 10, 4:25 PM · MITK, Next Milestone
floca edited projects for T27284: ImageStatisticView Histogram is only supported with one image and <=1 ROI, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:25 PM · MITK, Next Milestone
floca edited projects for T27032: [Image statistics] Discuss Histogram with respect to the new multi node selection, added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:25 PM · MITK, Next Milestone
floca edited projects for T27655: [statistics] Logic of DataGeneratorBase blocks the UI thread , added: Next Milestone; removed MITK (2020).
Thu, Sep 10, 4:24 PM · MITK, Next Milestone
floca reopened T26473: Optimize QmitkChartWidget interface, a subtask of T27285: QmitkChart widget should support ID or allow control over labels, as Open.
Thu, Sep 10, 10:36 AM · MITK, Next Milestone
floca reopened T26473: Optimize QmitkChartWidget interface as "Open".

I would keep it open because it is still (or became again) an issue (see parent task).

Thu, Sep 10, 10:36 AM · MITK
floca added a parent task for T26473: Optimize QmitkChartWidget interface: T27285: QmitkChart widget should support ID or allow control over labels.
Thu, Sep 10, 10:35 AM · MITK
floca added a subtask for T27285: QmitkChart widget should support ID or allow control over labels: T26473: Optimize QmitkChartWidget interface.
Thu, Sep 10, 10:35 AM · MITK, Next Milestone

Wed, Sep 9

floca committed rMITKd145b937dd99: T27702 - Configuration to build classification cmd apps (authored by floca).
T27702 - Configuration to build classification cmd apps
Wed, Sep 9, 9:38 AM
floca committed rMITK8e55b04ebcd5: Configuration to build classification cmd apps (authored by floca).
Configuration to build classification cmd apps
Wed, Sep 9, 9:38 AM
floca closed T27702: Create build-configuration for the MitkCLGlobalImageFeatures Miniapp (radiomics) as Resolved by committing rMITK8e55b04ebcd5: Configuration to build classification cmd apps.
Wed, Sep 9, 9:38 AM · HiGHmed, Kaapana (internal), MITK

Tue, Sep 8

floca added a comment to T27702: Create build-configuration for the MitkCLGlobalImageFeatures Miniapp (radiomics).

Ok, for the beginning, to have a configuration as fast as possible for the kaapana release, I have kept Qt on board as dependency and not started to mess arround in code.

Tue, Sep 8, 3:56 PM · HiGHmed, Kaapana (internal), MITK
floca added a revision to T27702: Create build-configuration for the MitkCLGlobalImageFeatures Miniapp (radiomics): Unknown Object (Differential Revision).
Tue, Sep 8, 3:47 PM · HiGHmed, Kaapana (internal), MITK
floca raised the priority of T27702: Create build-configuration for the MitkCLGlobalImageFeatures Miniapp (radiomics) from Wishlist to High.

@goetzm Thanks for the feedback. I will have a look, if take that road or life with Qt dependency for now. Have to evaluate the impact in practice...

Tue, Sep 8, 11:15 AM · HiGHmed, Kaapana (internal), MITK
floca added a comment to T25882: Rewrite dashboard script for CDash 2.6.

OMG. how should one find this...

Tue, Sep 8, 11:12 AM · CI, MITK (2020), Restricted Project

Mon, Sep 7

floca added a revision to T27111: [MITKDoc] Revise Matchpoint Registration Visualizer Plugin Documentation: Unknown Object (Differential Revision).
Mon, Sep 7, 10:08 PM · Cleared, MITK (2020)
floca committed rMITKe269e5930aef: T27113 - Revised documentation of MatchPoint Manipulator (authored by floca).
T27113 - Revised documentation of MatchPoint Manipulator
Mon, Sep 7, 12:44 PM
floca committed rMITK921ed6752145: Revised documentation of MatchPoint Manipulator (authored by floca).
Revised documentation of MatchPoint Manipulator
Mon, Sep 7, 12:44 PM
floca committed rMITK5c25fa6386a2: Fixed review comments (authored by floca).
Fixed review comments
Mon, Sep 7, 12:44 PM
floca closed T27113: [MITKDoc] Revise Matchpoint Registration Manipulator Plugin Documentation as Resolved by committing rMITK921ed6752145: Revised documentation of MatchPoint Manipulator.
Mon, Sep 7, 12:44 PM · Cleared, MITK (2020)
floca claimed T27655: [statistics] Logic of DataGeneratorBase blocks the UI thread .

I have checked with a prototyp to just move also the core of the generator to an own thread. It helps to make the UI more responsive. BUT it is not enough because the UI (workbench) thread and all other threads must kept seperated, using Qt mechanisms, we need to use a lot of signal/slot and this seems to keep the UI thread (event loop) very bussy.

Mon, Sep 7, 12:05 PM · MITK, Next Milestone

Fri, Sep 4

floca added a comment to T27702: Create build-configuration for the MitkCLGlobalImageFeatures Miniapp (radiomics).

@goetzm does the GIF mini app realy needs the screenshot feature within the app (there is already a CLScreenshot app). Reason for the question is, that this feature is the only reason why Qt becomes dragged into the app and it bloats the container/deployment.

Fri, Sep 4, 5:30 PM · HiGHmed, Kaapana (internal), MITK
floca added projects to T27702: Create build-configuration for the MitkCLGlobalImageFeatures Miniapp (radiomics): Kaapana (internal), HiGHmed.
Fri, Sep 4, 5:25 PM · HiGHmed, Kaapana (internal), MITK
floca claimed T27702: Create build-configuration for the MitkCLGlobalImageFeatures Miniapp (radiomics).

@schererj Do you mean the XML result export?

Fri, Sep 4, 5:24 PM · HiGHmed, Kaapana (internal), MITK
floca moved T27569: US DICOM images are displayed turquoise and LUT cannot be changed from Backlog to MITK Meeting on the Request for Discussion board.
Fri, Sep 4, 4:25 PM · Restricted Project, MITK
floca added a comment to T27570: US DICOM images are read as 3D volume.

If looked a bit closer. The time information is encoded in Tags of the MultiFrame and the CINE module.

Fri, Sep 4, 1:55 PM · Missing Info, Restricted Project, MITK
floca added a comment to T27568: US 2D image cannot be read: invalid tilt information.

Remark regarding option 4:

Fri, Sep 4, 12:56 PM · Restricted Project, MITK
floca added a project to T27569: US DICOM images are displayed turquoise and LUT cannot be changed: Request for Discussion.

@kleesiek thanks for the reminder after summer break.

Fri, Sep 4, 12:53 PM · Restricted Project, MITK
floca added a comment to T27571: Multilable segmentation does not work with US DICOM images.

@kislinsk can we currently produce MacOS Installer via CI? This would be the easiest way to provide a current installer for jens to test.

Fri, Sep 4, 12:42 PM · Missing Info, MITK (2020), Restricted Project
floca added a comment to T27570: US DICOM images are read as 3D volume.
  • data is taken as is (see also comment to T27568)
  • I'd say the probably correct description would be 2D-Realtime B-Mode where images are made at a constant frame rate (20 fps in the case of the Canon video). If you consider moving the transducer over the body it not necessarily results in a 3D image, more 2D+t - if you keep the transducer at a fixed spot and e.g. only tilt the tranducer, it is more 3D like.
  • I am not aware that there are sensors in the transducer that would give us its position and orientation in space

Yes you are right. I thought to much in the lines of CAMIs work.

Fri, Sep 4, 12:34 PM · Missing Info, Restricted Project, MITK
floca added a project to T27184: Clipping plane deformation tool doesn't show updates in 3d window: Missing Info.
Fri, Sep 4, 10:53 AM · Missing Info, Restricted Project, MITK (2020)

Thu, Sep 3

kalali awarded T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation a Cup of Joe token.
Thu, Sep 3, 10:21 PM · Missing Info, Restricted Project, MITK (2020)
floca closed T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation as Resolved.

Closed as all sub tasks relevent for MITK2020 are checked and corrected.

Thu, Sep 3, 9:20 PM · Missing Info, Restricted Project, MITK (2020)
floca committed rMITK22644d61abfd: Fixed T27641 - Refactored watershed tool for correct handling of dynamic… (authored by floca).
Fixed T27641 - Refactored watershed tool for correct handling of dynamic…
Thu, Sep 3, 9:16 PM
floca committed rMITKd1cb157710f9: Workarround for T27703 to avoid problematic threshold values that (authored by floca).
Workarround for T27703 to avoid problematic threshold values that
Thu, Sep 3, 9:16 PM
floca committed rMITK3250199d314b: Improve robustness of base class if derived classes cannot produce an ML… (authored by floca).
Improve robustness of base class if derived classes cannot produce an ML…
Thu, Sep 3, 9:16 PM
floca committed rMITKf8f833cb5916: Changed default settings for Watershed tool (authored by floca).
Changed default settings for Watershed tool
Thu, Sep 3, 9:16 PM
floca committed rMITK2e6b9c514b32: Reworked watershed tool. (authored by floca).
Reworked watershed tool.
Thu, Sep 3, 9:16 PM
floca committed rMITK7a61414d4497: Improved UI sizes (authored by floca).
Improved UI sizes
Thu, Sep 3, 9:16 PM
floca committed rMITK9df1d1b36b3a: Ensured that preview nodes cannot be selected as segmentation input. (authored by floca).
Ensured that preview nodes cannot be selected as segmentation input.
Thu, Sep 3, 9:16 PM
floca committed rMITK4fb6097092e9: Refactor Otsu tool and GUI to use AutoMLSegmentationWithPreviewTool and… (authored by floca).
Refactor Otsu tool and GUI to use AutoMLSegmentationWithPreviewTool and…
Thu, Sep 3, 9:16 PM
floca closed T27641: [Segmentation] Watershed does always generate a 3D static seg. Even if dynamic segmentation was generated. as Resolved by committing rMITK2e6b9c514b32: Reworked watershed tool..
Thu, Sep 3, 9:16 PM · Cleared, MITK (2020)
floca closed T27641: [Segmentation] Watershed does always generate a 3D static seg. Even if dynamic segmentation was generated., a subtask of T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation, as Resolved.
Thu, Sep 3, 9:16 PM · Missing Info, Restricted Project, MITK (2020)
floca committed rMITK0793a56eac3d: Added SimpleLabelSetListWidget (authored by floca).
Added SimpleLabelSetListWidget
Thu, Sep 3, 9:16 PM
floca committed rMITK490026873248: Added AutoMLSegmentationWithPreviewTool (authored by floca).
Added AutoMLSegmentationWithPreviewTool
Thu, Sep 3, 9:16 PM
floca committed rMITKb22b6a152b41: Removed wrong tooltip hint (authored by floca).
Removed wrong tooltip hint
Thu, Sep 3, 9:16 PM
floca created T27704: HyppopySolver: Setting default values unused #2.
Thu, Sep 3, 8:55 PM · Hyppopy
floca added a comment to T27093: [MITKDoc] Revise Segmentation Plugin.

Another addition for the documentation:

Thu, Sep 3, 6:24 PM · MITK (2020)
floca lowered the priority of T27703: [Segmentation] Watershed segmentation crashes on images when high threshold is chosen from Normal to Low.

It is rooted in an known unfixed error in itk: https://discourse.itk.org/t/crash-in-watershedimagefilter/2428

Thu, Sep 3, 6:01 PM · MITK
floca renamed T27703: [Segmentation] Watershed segmentation crashes on images when high threshold is chosen from [Segmentation] Watershed segmentation crashes on 4D images when high threshold is chosen to [Segmentation] Watershed segmentation crashes on images when high threshold is chosen.
Thu, Sep 3, 5:22 PM · MITK
floca added a revision to T27113: [MITKDoc] Revise Matchpoint Registration Manipulator Plugin Documentation: Unknown Object (Differential Revision).
Thu, Sep 3, 3:54 PM · Cleared, MITK (2020)
floca placed T25960: Evaluate UseCase C (radiomics) up for grabs.
Thu, Sep 3, 11:29 AM · Hyppopy
floca placed T25959: Evaluate UseCase B (registration) up for grabs.
Thu, Sep 3, 11:29 AM · Hyppopy
floca placed T25958: Evaluate UseCase A (hippocampus data) up for grabs.
Thu, Sep 3, 11:29 AM · Hyppopy
floca added a subtask for T27196: Rewrite packaging of MITK: T27693: Cannot start nightly workbench on a clean Ubuntu 18/20.
Thu, Sep 3, 10:19 AM · Cleared, MITK (2020)
floca added a parent task for T27693: Cannot start nightly workbench on a clean Ubuntu 18/20: T27196: Rewrite packaging of MITK.
Thu, Sep 3, 10:19 AM · MITK
floca edited projects for T27693: Cannot start nightly workbench on a clean Ubuntu 18/20, added: MITK; removed MITK (2020).

No issue for 2020, because it is currently not a part of the workbench release.
The problem will be covered by T27196: Rewrite packaging of MITK

Thu, Sep 3, 10:19 AM · MITK
floca added a comment to T27498: [Selection widgets] Define default for auto selection / listening mechanism.

@kalali It seems that you work at this task and already have some branch. But the task is not claimed by you. Is it on purpose?

Thu, Sep 3, 9:57 AM · Restricted Project, MITK (2020)
floca committed rMITKaa8f1cc2c749: Fixed T27698 - Segmentation toolbox is never enabled in multi-label… (authored by floca).
Fixed T27698 - Segmentation toolbox is never enabled in multi-label…
Thu, Sep 3, 9:15 AM