Merge branch 'T23481-FiberfoxSpeed4'
f7a6a0cc7dec
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Description

Merge branch 'T23481-FiberfoxSpeed4'

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neher	Authored on Feb 21 2018, 9:18 AM
neher	Pushed on Feb 21 2018, 9:21 AM

Parents

rMITK6286b083e6ae: Add optimization for FF parameters
rMITK4a2deaa93dbb: Merge branch 'T23699-RemoveNeedleAxisFromNavigationTool'

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neher committed rMITKf7a6a0cc7dec: Merge branch 'T23481-FiberfoxSpeed4' (authored by neher).Feb 21 2018, 9:18 AM

Merged Changes

6286b083e6ae Add optimization for FF parameters
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neher
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26f08f324f36 FF test random seed fix
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neher
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5f11cdb4d84b Everything to float but the actual signal generation
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Changes (39)

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Modules/

DiffusionImaging/

FiberTracking/

Algorithms/

ClusteringMetrics/

	mitkClusteringMetricLength.h
	mitkClusteringMetricEuclideanMean.h

Fiberfox/

Sequences/

mitkAcquisitionType.h

mitkCartesianReadout.h

mitkSingleShotEpi.h

SignalModels/

mitkAstroStickModel.cpp

mitkAstroStickModel.h

mitkBallModel.cpp

mitkBallModel.h

mitkChiSquareNoiseModel.h

mitkDiffusionNoiseModel.h

mitkDiffusionSignalModel.h

mitkDotModel.h

mitkRawShModel.h

mitkRicianNoiseModel.h

itkDftImageFilter.cpp

itkDftImageFilter.h

itkKspaceImageFilter.cpp

itkKspaceImageFilter.h

itkTractsToDWIImageFilter.cpp

itkTractsToDWIImageFilter.h

IODataStructures/

FiberBundle/

mitkFiberBundle.cpp

mitkFiberfoxParameters.cpp

mitkFiberfoxParameters.h

Testing/

mitkFiberfoxSignalGenerationTest.cpp

cmdapps/

Fiberfox/

CMakeLists.txt

Fiberfox.cpp

FiberfoxOptimization.cpp

TractographyEvaluation/

AnchorBasedScoring.cpp

ExtractSimilarTracts.cpp

MergeOverlappingTracts.cpp

files.cmake

Plugins/

org.mitk.gui.qt.diffusionimaging.fiberfox/

src/

internal/

QmitkFiberfoxView.cpp

QmitkFiberfoxView.h

org.mitk.gui.qt.diffusionimaging.fiberprocessing/

src/

internal/

QmitkFiberClusteringView.cpp

QmitkFiberClusteringViewControls.ui

rMITKf7a6a0cc7dec

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Modules/DiffusionImaging/FiberTracking/Algorithms/ClusteringMetrics/mitkClusteringMetricLength.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkAcquisitionType.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkCartesianReadout.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkSingleShotEpi.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkAstroStickModel.cpp

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkAstroStickModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkBallModel.cpp

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkBallModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkChiSquareNoiseModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkDiffusionNoiseModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkDiffusionSignalModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkDotModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkRawShModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkRicianNoiseModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkStickModel.cpp

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkStickModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkTensorModel.cpp

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Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkTensorModel.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/itkDftImageFilter.cpp

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Modules/DiffusionImaging/FiberTracking/Fiberfox/itkDftImageFilter.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/itkKspaceImageFilter.cpp

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Modules/DiffusionImaging/FiberTracking/Fiberfox/itkKspaceImageFilter.h

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Modules/DiffusionImaging/FiberTracking/Fiberfox/itkTractsToDWIImageFilter.cpp

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Modules/DiffusionImaging/FiberTracking/Fiberfox/itkTractsToDWIImageFilter.h

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Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundle/mitkFiberBundle.cpp

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Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.cpp

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Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.h

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Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberfoxSignalGenerationTest.cpp

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Modules/DiffusionImaging/FiberTracking/cmdapps/Fiberfox/CMakeLists.txt

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Modules/DiffusionImaging/FiberTracking/cmdapps/Fiberfox/Fiberfox.cpp

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Modules/DiffusionImaging/FiberTracking/cmdapps/Fiberfox/FiberfoxOptimization.cpp

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Modules/DiffusionImaging/FiberTracking/cmdapps/TractographyEvaluation/AnchorBasedScoring.cpp

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Modules/DiffusionImaging/FiberTracking/cmdapps/TractographyEvaluation/ExtractSimilarTracts.cpp

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Modules/DiffusionImaging/FiberTracking/cmdapps/TractographyEvaluation/MergeOverlappingTracts.cpp

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Modules/DiffusionImaging/FiberTracking/files.cmake

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Plugins/org.mitk.gui.qt.diffusionimaging.fiberfox/src/internal/QmitkFiberfoxView.cpp

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Plugins/org.mitk.gui.qt.diffusionimaging.fiberfox/src/internal/QmitkFiberfoxView.h

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Plugins/org.mitk.gui.qt.diffusionimaging.fiberprocessing/src/internal/QmitkFiberClusteringView.cpp

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Plugins/org.mitk.gui.qt.diffusionimaging.fiberprocessing/src/internal/QmitkFiberClusteringViewControls.ui

Merge branch 'T23481-FiberfoxSpeed4'f7a6a0cc7decActions

Description

Details

Event Timeline

Merged Changes

Changes (39)

rMITKf7a6a0cc7dec

Modules/DiffusionImaging/FiberTracking/Algorithms/ClusteringMetrics/mitkClusteringMetricLength.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkAcquisitionType.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkCartesianReadout.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkSingleShotEpi.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkAstroStickModel.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkAstroStickModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkBallModel.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkBallModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkChiSquareNoiseModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkDiffusionNoiseModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkDiffusionSignalModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkDotModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkRawShModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkRicianNoiseModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkStickModel.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkStickModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkTensorModel.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/SignalModels/mitkTensorModel.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkDftImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkDftImageFilter.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkKspaceImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkKspaceImageFilter.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkTractsToDWIImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkTractsToDWIImageFilter.h

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundle/mitkFiberBundle.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.h

Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberfoxSignalGenerationTest.cpp

Modules/DiffusionImaging/FiberTracking/cmdapps/Fiberfox/CMakeLists.txt

Modules/DiffusionImaging/FiberTracking/cmdapps/Fiberfox/Fiberfox.cpp

Modules/DiffusionImaging/FiberTracking/cmdapps/Fiberfox/FiberfoxOptimization.cpp

Modules/DiffusionImaging/FiberTracking/cmdapps/TractographyEvaluation/AnchorBasedScoring.cpp

Modules/DiffusionImaging/FiberTracking/cmdapps/TractographyEvaluation/ExtractSimilarTracts.cpp

Modules/DiffusionImaging/FiberTracking/cmdapps/TractographyEvaluation/MergeOverlappingTracts.cpp

Modules/DiffusionImaging/FiberTracking/files.cmake

Plugins/org.mitk.gui.qt.diffusionimaging.fiberfox/src/internal/QmitkFiberfoxView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging.fiberfox/src/internal/QmitkFiberfoxView.h

Plugins/org.mitk.gui.qt.diffusionimaging.fiberprocessing/src/internal/QmitkFiberClusteringView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging.fiberprocessing/src/internal/QmitkFiberClusteringViewControls.ui

Merge branch 'T23481-FiberfoxSpeed4'
f7a6a0cc7dec
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