mitkProjectTemplatePackageTest and mitkPluginGeneratorPackageTest fail on my nightly cause of my activated PMD library:
warning: target 'libpmdaccess2.so' is not absolute...
warning: target 'libpmdaccess2.so' does not exist...
ldd: ./libpmdaccess2.so: No such file or directory
...
Error copying file "libpmdaccess2.so" to "/media/hdd/thomasHdd/DartClients/MITK/MITK-Superbuild-Release-nightly/MITK-build/GP-bin/GP-build/_CPack_Packages/Linux/TGZ/MITK-2014.03.99-linux64/bin/libpmdaccess2.so".
CMake Error at /media/hdd/thomasHdd/DartClients/MITK/MITK/CMake/BundleUtilities.cmake:488 (file):
file RPATH_REMOVE given FILE "/media/hdd/thomasHdd/DartClients/MITK/MITK-Superbuild-Release-nightly/MITK-build/GP-bin/GP-build/_CPack_Packages/Linux/TGZ/MITK-2014.03.99-linux64/bin/libpmdaccess2.so" that does not exist.
There are also SOFA warnings and linker errors in the test output. Check this for details: http://cdash.mitk.org/testDetails.php?test=8056263&build=442103
I also tried building an installer with the same result.