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Thu, Apr 18

floca renamed T26288: MRI Perfusion view should only generate concentration images once from MRI Perfusion view should only generate concentration once to MRI Perfusion view should only generate concentration images once.
Thu, Apr 18, 7:09 PM · MITK
floca renamed T26288: MRI Perfusion view should only generate concentration images once from MRI Perfusion view should only generare concentration once to MRI Perfusion view should only generate concentration once.
Thu, Apr 18, 7:09 PM · MITK
floca triaged T26288: MRI Perfusion view should only generate concentration images once as Normal priority.
Thu, Apr 18, 7:09 PM · MITK
floca added a comment to T26287: MRI Perfusion crashes (sometimes) when using signal to concentration conversion.

Pushed new branch T26287-Perfusion_crash_when_converting_signal.

Thu, Apr 18, 6:50 PM · MITK
floca added a comment to T26287: MRI Perfusion crashes (sometimes) when using signal to concentration conversion.

It seems to beeing correlated with the addition of the generated concentration node to the data storage. If the nodes are not added to the datastorage, I cannot provoke a crash. This is at least concistent to the finding that there is also no proplem if we calculate the concentration beforehand.

Thu, Apr 18, 4:56 PM · MITK
floca added a comment to T26287: MRI Perfusion crashes (sometimes) when using signal to concentration conversion.

Narrowed down the point where it crashes.

Thu, Apr 18, 4:49 PM · MITK
floca triaged T26287: MRI Perfusion crashes (sometimes) when using signal to concentration conversion as High priority.
Thu, Apr 18, 4:40 PM · MITK
floca closed T26265: Warning in QmitkMultiNodeSelectionWidget as Resolved by committing rMITKbf7b24f189d4: Fixed T26265.
Thu, Apr 18, 4:26 PM · MITK
neher added a comment to T26285: [MITK Diffusion] Fiber fitting regularization.

Pushed new branch T26285-FitRegu.

Thu, Apr 18, 3:07 PM · MITK
neher triaged T26285: [MITK Diffusion] Fiber fitting regularization as Normal priority.
Thu, Apr 18, 3:04 PM · MITK
neher closed T26282: [MITK Diffusion] Missing icons as Resolved.
Thu, Apr 18, 3:03 PM · MITK
neher added a comment to T26282: [MITK Diffusion] Missing icons.

Pushed new branch T26282-Icons.

Thu, Apr 18, 11:18 AM · MITK
floca added a comment to T26265: Warning in QmitkMultiNodeSelectionWidget.

Pushed new branch T26265-Connect_error_multinodeselectionwidget.

Thu, Apr 18, 10:35 AM · MITK

Wed, Apr 17

kalali moved T25601: Modernize render window manager from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Wed, Apr 17, 10:36 AM · Restricted Project, MITK
kalali placed T23758: Introduction of custom multi widget editor up for grabs.
Wed, Apr 17, 10:35 AM · Restricted Project, MITK

Tue, Apr 16

kalali closed T25688: Render window manager with custom multi widget: beta version as Resolved.
Tue, Apr 16, 1:38 PM · Noteworthy, Restricted Project, MITK
kalali closed T25688: Render window manager with custom multi widget: beta version, a subtask of T25601: Modernize render window manager, as Resolved.
Tue, Apr 16, 1:38 PM · Restricted Project, MITK
kalali added a comment to T23758: Introduction of custom multi widget editor.

Merged this by merging the reviewed branch D175.
Known problems:
Some plugins try to get specific render windows (axial, sagittal, coronal) and immediately using an operation on that render window without checking if this render window is != nullptr. With the new multi widget editor these specific render windows might not be available and thus the call GetQmitkRenderWindow("axial") returns a nullptr (see also T25595).

Tue, Apr 16, 1:38 PM · Restricted Project, MITK
neher triaged T26282: [MITK Diffusion] Missing icons as Normal priority.
Tue, Apr 16, 1:20 PM · MITK
neher closed T25779: [MITK Diffusion] Streamline tractography parameter files as Resolved.
Tue, Apr 16, 1:19 PM · MITK
kalali added a commit to T22435: QmitkDataManager checks for deprecated QmitkStatisticsAction: rMITKf1be6e768ffa: Refactor data manager.
Tue, Apr 16, 12:31 PM · MITK
kalali added a commit to T22435: QmitkDataManager checks for deprecated QmitkStatisticsAction: rMITK02cb5d6d70f2: Refactor data manager; create action classes and data node context menu;.
Tue, Apr 16, 12:31 PM · MITK
kalali added a commit to T25254: Propagate preference page options: rMITKf1be6e768ffa: Refactor data manager.
Tue, Apr 16, 12:31 PM · MITK
neher triaged T26281: [MITK Diffusion] Fiberfox: simulation without fibers, only VFMs as Wishlist priority.
Tue, Apr 16, 10:10 AM · MITK

Mon, Apr 15

floca added a revision to T23808: Add Rule base class for DICOM source imagereferences: Restricted Differential Revision.
Mon, Apr 15, 5:45 PM · MITK
neher added a comment to T25779: [MITK Diffusion] Streamline tractography parameter files.

Pushed new branch T25779-StpFiles6.

Mon, Apr 15, 11:28 AM · MITK

Sat, Apr 13

seitela added a comment to T26277: Add phantom-based calibration to USCalibration plugin.

Pushed new branch T26277-PhantomBasedUSCalibration.

Sat, Apr 13, 4:55 PM · MITK, IGT
seitela triaged T26277: Add phantom-based calibration to USCalibration plugin as Normal priority.
Sat, Apr 13, 4:53 PM · MITK, IGT

Fri, Apr 12

floca added a comment to T23808: Add Rule base class for DICOM source imagereferences.

Pushed new branch T23808-Image2ImagePropertyRelation.

Fri, Apr 12, 6:23 PM · MITK
hentsch placed T25871: [chart] Implement the chart type pie up for grabs.
Fri, Apr 12, 4:11 PM · Restricted Project, MITK
kausch triaged T26276: Segmentation created for multiple timepoints on 3D+t images as Normal priority.
Fri, Apr 12, 3:59 PM · MITK (2018-04-4)
kausch added a comment to T26029: [image statistics plugin] 4D image + 4D segmentation as mask does not work.

Statistics are calculated for those time steps where a mask is provided, for the others not. When the view asks for the statistics an exception is thrown if the statistics don't exist.

Fri, Apr 12, 3:56 PM · Restricted Project, MITK
hentsch claimed T25871: [chart] Implement the chart type pie.
Fri, Apr 12, 3:37 PM · Restricted Project, MITK
kislinsk closed T22591: Error compiling Mitk 2016-11 : Error on SimpleITK installation phase (patch provided) as Invalid.

No, I think in 2018.04 we even do not have SimpleITK anymore. So, closing as Invalid eventhough it was valid back then.

Fri, Apr 12, 3:29 PM · Restricted Project, Pull Request, MITK
hentsch closed T23408: Image Statistics plugin: histogram for small bin sizes is not visible as Invalid.

Does not longer occur with plotly.js.
Long live plotly!! Thanks to @steint

Fri, Apr 12, 3:28 PM · Restricted Project, MITK
hentsch merged T26216: Implement UpdateMinMaxValueYView for Y-Scaling of MITKChart into T26268: [MitkChart] Add possibility to zoom in y direction.
Fri, Apr 12, 2:35 PM · Restricted Project, MITK
hentsch merged task T26216: Implement UpdateMinMaxValueYView for Y-Scaling of MITKChart into T26268: [MitkChart] Add possibility to zoom in y direction.
Fri, Apr 12, 2:34 PM · MITK
hentsch closed T26222: [MitkChart] Maximizing mitkChartWidget does not lead to maximization of chart as Invalid.

Was only due to a wrong qt layout, works now.

Fri, Apr 12, 2:03 PM · MITK
neher closed T26273: [MITK Diffusion] Probabilistic peak tracking as Resolved.
Fri, Apr 12, 1:33 PM · MITK
neher added a comment to T25779: [MITK Diffusion] Streamline tractography parameter files.

Pushed new branch T25779-StpFiles5.

Fri, Apr 12, 1:11 PM · MITK
kalali added a comment to T23165: DICOM reader provides image fragments where a coherent image volume is desired..

Can this be closed?

Fri, Apr 12, 12:53 PM · Restricted Project, MITK
kalali added a comment to T22591: Error compiling Mitk 2016-11 : Error on SimpleITK installation phase (patch provided).

Is this still an open topic?

Fri, Apr 12, 12:51 PM · Restricted Project, Pull Request, MITK
kislinsk removed a project from T26167: ExtractSliceFilter handles 3D+t images inefficiently and inconsequently: Request for Discussion.

Do (2).

Fri, Apr 12, 11:44 AM · MITK
kislinsk edited projects for T24303: A segmentation should generate all DICOM relevant IDs as soon as it can be referenced., added: DICOM; removed Request for Discussion.

We all agree on the proposed solutions. We want to collect all segmentation related tasks in a a Segmentation project/tag.

Fri, Apr 12, 11:35 AM · DICOM, MITK
kislinsk closed T25963: "Segmentation" property is rarely used as Resolved.

Status quo:

  • binary and segmentation is set for legacy segmentation images that were created with our segmentation tools. binary is always set even the legacy segmentation was not created in MITK.
  • Both properties are also set for the current segmentation image type which isn't necessary in theory because the image type would be enough.
Fri, Apr 12, 11:25 AM · MITK
kislinsk added a comment to T23774: Implement helper to correctly (DICOM conformal) parameterize images (or other BaseData derived classes).

Also regard discussion of T25963 for helper for segmentations.

Fri, Apr 12, 11:23 AM · MITK
hentsch closed T26272: [MitkChart] warning about new registered objects as Resolved.

At least, there are fewer warnings. Couldn't prevent all warnings.

Fri, Apr 12, 9:50 AM · MITK
hentsch added a comment to T26272: [MitkChart] warning about new registered objects.

Pushed new branch T26272-chartWarning2.

Fri, Apr 12, 9:47 AM · MITK
hentsch updated subscribers of T26029: [image statistics plugin] 4D image + 4D segmentation as mask does not work.
Fri, Apr 12, 9:35 AM · Restricted Project, MITK
hentsch added a comment to T26272: [MitkChart] warning about new registered objects.

Pushed new branch T26272-chartWarningNewRegisteredObjects.

Fri, Apr 12, 8:52 AM · MITK