Diffusion MITK 8a945164c978

Merge branch 'T23211-FibFit2'
8a945164c978
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Merge branch 'T23211-FibFit2'

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neher	Authored on Sep 27 2017, 10:23 AM
neher	Pushed on Sep 27 2017, 10:20 AM

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rMITKf3cc4d294907: Fix qball recon cmdapp
rMITK253426268a76: remove unnecessary debug output - from test case and on construction of object

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neher committed rMITK8a945164c978: Merge branch 'T23211-FibFit2' (authored by neher).Sep 27 2017, 10:23 AM

hentsch mentioned this in T23491: RT Struct visualization crashes.Oct 11 2017, 2:10 PM

Merged Changes

f3cc4d294907 Fix qball recon cmdapp
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ad77bfb80dde Add reference paper
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5cad80165a9d Output residual images
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11be702a7944 Add local MSE regularization
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3392756682af Add zero direction to fit
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955b3b3e94c7 Weight signal contributions of each fiber segment by angle to corresponding peak
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ee9ecb4b2472 Normalize data. Todo: check output images and second run upper bound
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d51731c4301b Fit only TD not direction. Strong regularization needed
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f66123d74980 Update cost function
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Changes (2)

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Modules/

DiffusionImaging/

FiberTracking/

cmdapps/

TractographyEvaluation/

FitFibersToImage.cpp

Quantification/

cmdapps/

QballReconstruction.cpp

rMITK8a945164c978

Modules/DiffusionImaging/FiberTracking/cmdapps/TractographyEvaluation/FitFibersToImage.cpp

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Modules/DiffusionImaging/Quantification/cmdapps/QballReconstruction.cpp

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