Merge branch 'T19932-labSetup' into T19932-labSetupIntegrationAugust2017
961c68ca5ad4
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Description

Merge branch 'T19932-labSetup' into T19932-labSetupIntegrationAugust2017

Conflicts:
Plugins/PluginList.cmake
Plugins/org.mitk.gui.qt.ultrasound/src/internal/UltrasoundSupport.cpp

Details

Provenance

• kirchnth	Authored on Aug 2 2017, 8:34 PM
• kirchnth	Pushed on Aug 2 2017, 8:33 PM

Parents

rMITK8a029d820d0a: this now actually scans multiple angles -Thomas
rMITKd993ade5821d: Merge branch 'T23108-MlTrackingUpdates'

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Event Timeline

• kirchnth committed rMITK961c68ca5ad4: Merge branch 'T19932-labSetup' into T19932-labSetupIntegrationAugust2017 (authored by • kirchnth).Aug 2 2017, 8:34 PM

Merged Changes

This commit merges a very large number of changes. Only the first 50 are shown.

8a029d820d0a this now actually scans multiple angles -Thomas
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• sattler
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853e410257c4 this fixes an issue where PA signal was mixed in US data
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• sattler
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4315bf74229c - fixed speedOfSound paramter for PA, it's now updated if it changes…
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• sattler
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d44d52c136d9 -Now the raw US data is being saved, too!
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• sattler
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f51553a82347 T19932 -rewrote a part of the lasercontrol GUI, so that the…
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• sattler
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7f4f10acad03 T19932 -save USImages and settings used for Transmission/Receiving/Beamforming
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• sattler
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915038840591 T19932 just changed spacing of raw images to [us]
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• sattler
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399998152341 T19932 -stuff Thomas didn't commit -fixed raw spacing ([s])
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• sattler
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7702c5e670d1 ScaleLegendOverlay is now ScaleLegendAnnotation making those changes necessary…
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• sattler
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87917046eb33 Merge remote-tracking branch 'origin/T2662-darkStyle2017' into T19932-labSetup
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• sattler
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2e171c1b5cfc Merge branch 'T19932-hardwareControlUnited' into T19932-labSetup
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• sattler
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daff1168ec34 Merge branch 'T2662-darkStyle2017' of https://phabricator.mitk.org/source/mitk…
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• kirchnth
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a9fc822825d2 optimizing the spin box
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• kirchnth
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c9d736a2ff7d Merge branch 'T2662-darkStyle2017' of https://phabricator.mitk.
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• petersej
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99fa0dacfc66 Start implementing dark icon theme
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• petersej
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bf7e5904e082 font choices are now persistent
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• kirchnth
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0a803bc68ad2 renamed "darkStyle2017" to "darkstyle"
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• kirchnth
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14d903f8e4ee added new font selection feature in themes preference page. todo: make the font…
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• kirchnth
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fbaaa0408054 a variety of style changes and fixes
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• kirchnth
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87414b8314ec now with working blueberry close tab buttons and working QmitkRenderWindowMenu…
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• kirchnth
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0da8fcc01c87 a lot of style fixes/changes - i would call this an ok version to start with
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• kirchnth
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d7132f6b29a3 removed a custom stylesheet in Multilablesegmentationutils because it overwrote…
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• kirchnth
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bccd8abe629d paths are relative and work (exept for blueberry things ... todo) and the theme…
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• kirchnth
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f734baaa1780 T19932 -added a way to switch energy compensation on and off
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• sattler
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5de4cd58105c T19932 -opening and closing the PausViewer Plugin while running the US Module…
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• sattler
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c7697f1e47d1 next try for a new darktheme this is adapted from a qt theme by Colin Duquesnoy…
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• sattler
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Concern Raised
ed4b9e12d100 T19932 -Removed the seperate windows for US and PA images -PAUSViewer Plugin…
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• sattler
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f19ff5fef667 removed disfunct pausmultiwidgeteditor
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• sattler
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c570726f373a created plugins for simultaneous viewing of PAT and US ... the pausmultiwidget…
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• sattler
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e918891b66b1 fixed a typo
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• sattler
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33f60d538f86 these are uncomitted changes by franz ... tztztz
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• sattler
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d62bfb4fb073 -made some code look nicer
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• sattler
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a265558bb823 T19932 -just small fixes
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• sattler
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d0667204eec2 T19932 -made the windows look much nicer -added a nice levelwindow! but it's…
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• sattler
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2bb6da52940d T19932 - made beamformed and raw seperately saveable (finished) - removed…
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• sattler
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e14248890379 T19932 -added a scale (needs some serious tuning) -saving the raw images works…
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• sattler
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6734e5af8276 new default values for qpat purposes
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• sattler
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e76f52f0be04 T19932 -we now have seperate windows for PA and US images -did some setup for…
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• sattler
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ed4e4f2628f8 T19932 -GUI updates -implemented overlays -setup new RenderWindows
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• sattler
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d749029ee6b4 T19932
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• sattler
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323e88b5e2d3 T19932 -fixed bugs -found out how to add overlays and set up some stuff -found…
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• sattler
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240f5b693a5a T19932 -compensation works now as it should, and places the fluence…
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• sattler
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bb098f4413a8 T19932 -fixed error when resizing fluence images
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• sattler
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df2427f3894c T19932 - correction for energy values is now being done
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• sattler
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18ba3e7fcdfb T19932 -fixed the saving of the energy values and timestamps of ophir
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• sattler
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63436025e76a T19932 - Fluence compensation works now, only thing left to do is to load all…
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• sattler
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44f92e15f837 T19932 -resampling can be set now in the gui -set up lots of things so…
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• sattler
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296d4ae20b04 Finished T19939 calibrated tuning
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• sattler
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a968e7ad95cc gui stuff
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• sattler
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1ca2ad51d85b T19855 -the timestamps of the pyro get saved now
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• sattler
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Changes (260)
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Packages

CMake/

BuildConfigurations/

camiPhotoacousticsSetup.cmake

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Modules/

Annotation/

include/

mitkScaleLegendAnnotation.h

IGT/

Common/

mitkSerialCommunication.cpp

mitkSerialCommunication.h

ModuleList.cmake

PhotoacousticsHardware

OpotekPhocusMobile.xml

STUNE.dmc

configFastTuneOPO.dmc

configSlowTuneOPO.dmc

executeFastTuneOPO.dmc

executeSlowTuneOPO.dmc

fastTuneOPO.dmc

fastTuneOPO700to900.dmc

homeOPO.dmc

opotekPhocusMobileDkfz160907.ini

US/

USControlInterfaces/

mitkUSDiPhASDeviceCustomControls.cpp

mitkUSDiPhASDeviceCustomControls.h

itkAnalyticSignalImageFilter.h

itkAnalyticSignalImageFilter.hxx

itkBModeImageFilter.h

itkBModeImageFilter.hxx

itkFFT1DComplexToComplexImageFilter.h

itkFFT1DComplexToComplexImageFilter.hxx

itkFFT1DRealToComplexConjugateImageFilter.h

itkFFT1DRealToComplexConjugateImageFilter.hxx

itkRegionFromReferenceImageFilter.h

itkRegionFromReferenceImageFilter.hxx

itkVnlFFT1DComplexConjugateToRealImageFilter.h

itkVnlFFT1DComplexConjugateToRealImageFilter.hxx

itkVnlFFT1DComplexToComplexImageFilter.h

itkVnlFFT1DComplexToComplexImageFilter.hxx

itkVnlFFT1DRealToComplexConjugateImageFilter.h

itkVnlFFT1DRealToComplexConjugateImageFilter.hxx

mitkUSDiPhASActivator.cpp

mitkUSDiPhASActivator.h

mitkUSDiPhASBModeImageFilter.h

mitkUSDiPhASBModeImageFilter.hxx

mitkUSDiPhASCustomControls.cpp

mitkUSDiPhASCustomControls.h

mitkUSDiPhASDevice.cpp

mitkUSDiPhASDevice.h

mitkUSDiPhASImageSource.cpp

mitkUSDiPhASImageSource.h

mitkUSDiPhASProbe.h

mitkUSDiPhASProbesControls.cpp

mitkUSDiPhASProbesControls.h

USModel/

mitkUSDevice.cpp

files.cmake

USUI/

Qmitk/

QmitkUSControlsCustomDiPhASDeviceWidget.cpp

QmitkUSControlsCustomDiPhASDeviceWidget.h

QmitkUSControlsCustomDiPhASDeviceWidget.ui

files.cmake

mitkUSUIActivator.cpp

mitkUSUIActivator.h

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rMITK961c68ca5ad4

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CMake/BuildConfigurations/camiPhotoacousticsSetup.cmake

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Modules/Annotation/include/mitkScaleLegendAnnotation.h

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Modules/IGT/Common/mitkSerialCommunication.cpp

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Merge branch 'T19932-labSetup' into T19932-labSetupIntegrationAugust2017961c68ca5ad4Actions

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Changes (260)Show All Changes

Very Large Commit

rMITK961c68ca5ad4

CMake/BuildConfigurations/camiPhotoacousticsSetup.cmake

Modules/Annotation/include/mitkScaleLegendAnnotation.h

Modules/IGT/Common/mitkSerialCommunication.cpp

Modules/IGT/Common/mitkSerialCommunication.h

Modules/ModuleList.cmake

Modules/PhotoacousticsHardware/CMakeLists.txt

Modules/PhotoacousticsHardware/OphirCppWrapper/ConsoleExample.cpp

Modules/PhotoacousticsHardware/OphirCppWrapper/OphirPyroWrapper.cpp

Modules/PhotoacousticsHardware/OphirCppWrapper/OphirPyroWrapper.h

Modules/PhotoacousticsHardware/OphirCppWrapper/readme.txt

Modules/PhotoacousticsHardware/Resources/FTUNE.dmc

Modules/PhotoacousticsHardware/Resources/GHOME.dmc

Modules/PhotoacousticsHardware/Resources/OpotekPhocusMobile.xml

Modules/PhotoacousticsHardware/Resources/STUNE.dmc

Modules/PhotoacousticsHardware/Resources/configFastTuneOPO.dmc

Modules/PhotoacousticsHardware/Resources/configSlowTuneOPO.dmc

Modules/PhotoacousticsHardware/Resources/executeFastTuneOPO.dmc

Modules/PhotoacousticsHardware/Resources/executeSlowTuneOPO.dmc

Modules/PhotoacousticsHardware/Resources/fastTuneOPO.dmc

Modules/PhotoacousticsHardware/Resources/fastTuneOPO700to900.dmc

Modules/PhotoacousticsHardware/Resources/homeOPO.dmc

Modules/PhotoacousticsHardware/Resources/opotekPhocusMobileDkfz160907.ini

Modules/PhotoacousticsHardware/Resources/test.dmc

Modules/PhotoacousticsHardware/Resources/tuneOPOto700.dmc

Modules/PhotoacousticsHardware/files.cmake

Modules/PhotoacousticsHardware/mitkGalilMotor.cpp

Modules/PhotoacousticsHardware/mitkGalilMotor.h

Modules/PhotoacousticsHardware/mitkOphirPyro.cpp

Modules/PhotoacousticsHardware/mitkOphirPyro.h

Modules/PhotoacousticsHardware/mitkQuantelLaser.cpp

Modules/PhotoacousticsHardware/mitkQuantelLaser.h

Modules/US/CMakeLists.txt

Modules/US/USControlInterfaces/mitkUSDiPhASDeviceCustomControls.cpp

Modules/US/USControlInterfaces/mitkUSDiPhASDeviceCustomControls.h

Modules/US/USHardwareDiPhAS/CMakeLists.txt

Modules/US/USHardwareDiPhAS/FranzTissue.nrrd

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkAnalyticSignalImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkAnalyticSignalImageFilter.hxx

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkBModeImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkBModeImageFilter.hxx

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkFFT1DComplexToComplexImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkFFT1DComplexToComplexImageFilter.hxx

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkFFT1DRealToComplexConjugateImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkFFT1DRealToComplexConjugateImageFilter.hxx

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkRegionFromReferenceImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkRegionFromReferenceImageFilter.hxx

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkVnlFFT1DComplexConjugateToRealImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkVnlFFT1DComplexConjugateToRealImageFilter.hxx

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkVnlFFT1DComplexToComplexImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkVnlFFT1DComplexToComplexImageFilter.hxx

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkVnlFFT1DRealToComplexConjugateImageFilter.h

Modules/US/USHardwareDiPhAS/ITKUltrasound/itkVnlFFT1DRealToComplexConjugateImageFilter.hxx

Modules/US/USHardwareDiPhAS/Resources/Fluence05.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence06.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence07.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence08.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence09.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence10.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence11.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence12.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence13.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence14.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence15.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence16.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence17.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence18.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence19.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence20.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence21.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence22.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence23.nrrd

Modules/US/USHardwareDiPhAS/Resources/Fluence24.nrrd

Merge branch 'T19932-labSetup' into T19932-labSetupIntegrationAugust2017
961c68ca5ad4
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Changes (260)
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